BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00005091
         (2404 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...   790   0.0  
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s...   665   0.0  
emb|CDP02819.1| unnamed protein product [Coffea canephora]            646   0.0  
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       569   e-159
ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III s...   557   e-155
ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III s...   556   e-155
ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III s...   556   e-155
ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III s...   529   e-147
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   526   e-146
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   523   e-145
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   521   e-145
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   520   e-144
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   518   e-143
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   513   e-142
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...   512   e-142
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   512   e-142
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   506   e-140
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          506   e-140
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   504   e-139
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   504   e-139

>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
            indicum]
          Length = 683

 Score =  790 bits (2039), Expect = 0.0
 Identities = 417/694 (60%), Positives = 490/694 (70%), Gaps = 2/694 (0%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            DGP + P R SRFAPKG+KF+                                      K
Sbjct: 11   DGPSQVPNRPSRFAPKGSKFKPRPKTEPSQLPPPAASDTVEGLPVPKKEEPGI------K 64

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSPS 1918
            P +KP+  N    +DVE+ P V++ EG DD ME EA   E +P  +D +VREIDVYF+PS
Sbjct: 65   PDIKPEFANDGNDMDVEVKPEVKEEEG-DDLMETEA---EAEP--DDAIVREIDVYFTPS 118

Query: 1917 VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPRV 1738
            +D  T+LY+ QYPLRPLWRPYELDDRC+EVRVKP S E+EVDLA+DVDSKN+D+GADPRV
Sbjct: 119  IDSNTRLYVLQYPLRPLWRPYELDDRCDEVRVKPASAELEVDLAVDVDSKNYDSGADPRV 178

Query: 1737 QMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTAVRN 1558
            QMKKQ L  SWKPP  SG  VG+LTGNKLHLNP+HAVVQLRPSM+HLD K+SK++T    
Sbjct: 179  QMKKQILTSSWKPPHASGYAVGILTGNKLHLNPVHAVVQLRPSMQHLDAKDSKRKTI--- 235

Query: 1557 NVEVVVKSEEHQEAKPSGMSKK-QKAPEQTKDDREAWVPLKYHSVRSDVAAGYLQKMIAR 1381
            NVE  VK EE QE KPSG SKK  K PEQ  D  E W+PLKYHS +SDVAAGYL+KM++R
Sbjct: 236  NVEDRVKLEEPQEGKPSGSSKKLSKVPEQNNDSGEGWIPLKYHSAKSDVAAGYLRKMMSR 295

Query: 1380 EGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWLLEGPPLHRFD 1201
             GSQIYFS SS DYLNSLCPGTS DS  S   PRR LL LPLKERF+TWLLEGP +HRFD
Sbjct: 296  GGSQIYFSMSSCDYLNSLCPGTSSDSFSSKGPPRRVLLTLPLKERFRTWLLEGPRVHRFD 355

Query: 1200 TLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRATARDRV 1021
             LKYLAPD                 QGLWV K++LVY           DQ +   ARD V
Sbjct: 356  ALKYLAPDESVEEILGVIQEHARLVQGLWVPKSSLVY---------GTDQGVEVLARDYV 406

Query: 1020 LLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKLNPAVV 841
            LLLFSKN II+NS+LP +PQ + AMK VL+ LA ERP F DWKLKELPD+SFIK NP++V
Sbjct: 407  LLLFSKNIIINNSQLPQRPQLSKAMKEVLNVLAVERPAFSDWKLKELPDISFIKRNPSIV 466

Query: 840  KKQQEVWENIEKKFNGLNSGGRNAPSMKTS-KSSAPTNLVLSNGSDNLAARTSGGSTPRN 664
            +KQ+E WE +EKK N L  GGRN P +KTS KS+   N      S+ +A R   G+  + 
Sbjct: 467  QKQEEEWECLEKKINDLLFGGRNGPGVKTSSKSNTTNNPAAPKSSNRVATRAPNGAPSKT 526

Query: 663  VMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAASNIDA 484
             MP E RE   KALQKLFKSIK CSFQQISQ+L+D AVS   RS GFA+EAVAAA++IDA
Sbjct: 527  AMPEEVREAVTKALQKLFKSIKVCSFQQISQRLRDMAVSESKRSTGFAREAVAAANSIDA 586

Query: 483  FPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKASINAAA 304
            FPDELQ+I+S+VAVNIHGICVP+SSPD PQYD  RK++IDLFLAEGPNAKLKKA I  AA
Sbjct: 587  FPDELQAIISQVAVNIHGICVPKSSPDNPQYDPFRKIVIDLFLAEGPNAKLKKAPILEAA 646

Query: 303  NMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
             M+L++ I    Y KVL ++C+SQGSAWVL++ D
Sbjct: 647  KMELKRDISPIEYQKVLQELCLSQGSAWVLRSAD 680


>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Erythranthe
            guttatus]
          Length = 676

 Score =  665 bits (1717), Expect = 0.0
 Identities = 368/697 (52%), Positives = 459/697 (65%), Gaps = 7/697 (1%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            D   +AP R  RFAPKG K                                      + +
Sbjct: 11   DAKPRAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEEPKP----EIE 66

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQP----GDEDKVVREIDVY 1930
            P +KP+H N A  +DVE+ P V+  E   D ME E A   + P       D+VVREIDVY
Sbjct: 67   PDIKPEHANGAMEMDVEVKPDVKVKE---DLMETEVAESVLDPVVKESTVDEVVREIDVY 123

Query: 1929 FSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGA 1750
             + SVDP T L+++QYPLRPLWRPYELD++C+EVRVKP+   VE+DLA+D  SKN+D  A
Sbjct: 124  LNHSVDPNTCLHVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTA 183

Query: 1749 DPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKES-KKR 1573
            DP++QM+KQTL  +W PP  SG  V VL GNKL+LNPIHAVVQLRPSM+HLD ++S KK+
Sbjct: 184  DPKLQMQKQTLRSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKK 243

Query: 1572 TAVRNNVEVVVKSEEHQEAKPSGMSKKQKAPEQTKDDREAWVPLKYHSVRSDVAAGYLQK 1393
            T  R+N +  VK E+ Q   PSG         QTK D   WVPLKYHS RSD+AA Y++K
Sbjct: 244  TNARSNTKDSVKLEDPQ---PSG--------AQTKPD---WVPLKYHSARSDMAATYVKK 289

Query: 1392 MIAR--EGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWLLEGP 1219
            M+AR  EGSQI FS SS+DY+NSLCPGTS  S  SN  P RSLLALPLKERFKTWLLE  
Sbjct: 290  MMAREVEGSQISFSMSSNDYINSLCPGTSSGSFSSNVPPIRSLLALPLKERFKTWLLEAN 349

Query: 1218 PLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRA 1039
             +HRFD LK+LAPD                 QGLW  K+ LVY  D+          +  
Sbjct: 350  TVHRFDALKHLAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDH---------GLDV 400

Query: 1038 TARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIK 859
             ARD VL LFSKN II+NS+LP +PQ ANAMK VL+ LA ERP F DWKLK  PD +F+K
Sbjct: 401  LARDYVLALFSKNVIITNSQLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMK 460

Query: 858  LNPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSDNLAARTSGG 679
             N ++VKK +E W+ +EKK N   +  +N  +M+++ +  P    +   S N+  RT   
Sbjct: 461  FNQSIVKKHEEEWQGVEKKINDDFNVAKNKAAMRSNAAKKP---AIPKSSSNVETRTPNV 517

Query: 678  STPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAA 499
            ST R  M  + RE  +KALQKLFKS+K CS QQISQ+L+D AVS   RS GF++EAVAAA
Sbjct: 518  STSRTAMSDDVREAIKKALQKLFKSVKVCSLQQISQRLRDMAVSESTRSTGFSREAVAAA 577

Query: 498  SNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKAS 319
            ++IDA+PDELQ+I+SEVAVNIHGICVP+SSPD PQYD  RKV+IDLF+AEGPNAK+KKAS
Sbjct: 578  NSIDAYPDELQAIISEVAVNIHGICVPKSSPDHPQYDPFRKVVIDLFIAEGPNAKIKKAS 637

Query: 318  INAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKT 208
            +  AA ++L++ I  + Y KV+ ++C+SQGSAWVLK+
Sbjct: 638  MVEAAKVELKRDIPPNEYQKVVQELCLSQGSAWVLKS 674


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  646 bits (1667), Expect = 0.0
 Identities = 347/698 (49%), Positives = 444/698 (63%), Gaps = 6/698 (0%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            D P +AP R SRFAPKG+KF+                                     + 
Sbjct: 7    DEPSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAA-AGKA 65

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSPS 1918
                    + + A+DV+     E  +  D+ ME    G       ED++VREIDVY +PS
Sbjct: 66   EDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEG-------EDEIVREIDVYLTPS 118

Query: 1917 VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPRV 1738
            +DP T+LY+ QYPLRPLWRPYELDDRCEEVRVK  S EVEVDLA+DVDSKN+D+ ADPRV
Sbjct: 119  IDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDADPRV 178

Query: 1737 QMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTAVRN 1558
             M KQTL  SWKPP T+G  VGVL GNKLHLNPIHAVVQLRPSM+H   + SK+RT   +
Sbjct: 179  SMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASS 238

Query: 1557 NVEVVVKSEEHQEAKPSGMSKKQ-----KAPEQTKDDREAWVPLKYHSVRSDVAAGYLQK 1393
            N+E   K EE      +G  KKQ        EQ KD RE W+PL YH  RSD++  Y++K
Sbjct: 239  NLEDNTKGEE----VTTGSLKKQGKSSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRK 294

Query: 1392 MIAREGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWLLEGPPL 1213
            M+  + S I FS + HDY+N+LCPGTS ++  SN   RR LL+LPL+ERF+TWLL+GPP+
Sbjct: 295  MVEHDSSHIQFSMNRHDYVNTLCPGTSNENNGSNGPSRRVLLSLPLEERFRTWLLQGPPI 354

Query: 1212 HRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRATA 1033
            HRFD LK+LAPD                 QGLW+ K++L+Y          KDQ I A A
Sbjct: 355  HRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLY---------GKDQGIDALA 405

Query: 1032 RDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKLN 853
            RD VLLLFS+  II+NS+LP Q +   AM+ VL+ +A ER    DWK KE PD++FIKLN
Sbjct: 406  RDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLNTVAFERASLNDWKFKEPPDMTFIKLN 465

Query: 852  PAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPT-NLVLSNGSDNLAARTSGGS 676
              +V++Q++ WE +EK       G +N P+ K S     T N   S      A+ +    
Sbjct: 466  SKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAG 525

Query: 675  TPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAAS 496
             PR  M  E RE   KALQKLF+S K CSFQQI Q+L++ AVS  +R KGFA+EA+AAA 
Sbjct: 526  VPRRPMSEETREALPKALQKLFQSHKVCSFQQICQRLREMAVSESSRPKGFAREAIAAAH 585

Query: 495  NIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKASI 316
             ++A P+ELQ+I+S+VA+NIHG+ V +SSP  P++DE RKV+IDLF+AEGPNAKLKKAS+
Sbjct: 586  GVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEFRKVVIDLFIAEGPNAKLKKASM 645

Query: 315  NAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
              AA ++L++ I+   Y KV+ ++CVSQGSAWVLK+GD
Sbjct: 646  IEAAKLQLKRDINSLEYQKVVQELCVSQGSAWVLKSGD 683


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  569 bits (1466), Expect = e-159
 Identities = 323/698 (46%), Positives = 411/698 (58%), Gaps = 6/698 (0%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            D P +AP R SRFAPKG+KF+                                     + 
Sbjct: 7    DEPSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAA-AGKA 65

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSPS 1918
                    + + A+DV+     E  +  D+ ME    G       ED++VREIDVY +PS
Sbjct: 66   EDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEG-------EDEIVREIDVYLTPS 118

Query: 1917 VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPRV 1738
            +DP T+LY+ QYPLRPLWRPYELDDRCEEVRVK  S EVEVDLA+DVDSKN+D+ ADPRV
Sbjct: 119  IDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRV 178

Query: 1737 QMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTAVRN 1558
             M KQTL  SWKPP T+G  VGVL GNKLHLNPIHAVVQLRPSM+H   + SK+RT   +
Sbjct: 179  SMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASS 238

Query: 1557 NVEVVVKSEEHQEAKPSGMSKKQKAP-----EQTKDDREAWVPLKYHSVRSDVAAGYLQK 1393
            N+E   K EE      +G  KKQ  P     EQ KD RE W+PL YH  RSD++  Y++K
Sbjct: 239  NLEDNTKGEE----VTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRK 294

Query: 1392 MIAREGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWLLEGPPL 1213
            M+  + S I FS  +HDY+N+LCPGTS ++  SN  P R LL+LPL+ERF+TWLL+GPP+
Sbjct: 295  MVEHDSSHIQFS-MNHDYVNTLCPGTSNENNGSNG-PSRVLLSLPLEERFRTWLLQGPPI 352

Query: 1212 HRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRATA 1033
            HRFD LK+LAPD                 QGLW+ K++L+Y          KDQ I A A
Sbjct: 353  HRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLY---------GKDQGIDALA 403

Query: 1032 RDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKLN 853
            RD VLLLFS+  II+NS+LP Q +   AM+ VL  +A ER    DWK KE PD++FIKLN
Sbjct: 404  RDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLN 463

Query: 852  PAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPT-NLVLSNGSDNLAARTSGGS 676
            P +V++Q++ WE +EK       G +N P+ K S     T N   S      A+ +    
Sbjct: 464  PKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAG 523

Query: 675  TPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAAS 496
             PR  M  E RE   KALQKLF+S K C FQQI Q+L++ AVS  +R KGFA+EA+AAA 
Sbjct: 524  VPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFAREAIAAAH 582

Query: 495  NIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKASI 316
             ++A P+ELQ+I+S+VA+NIHG+ V +SSP  P++DE                       
Sbjct: 583  GVEAPPEELQAIISQVAINIHGVYVLKSSPVHPEHDEF---------------------- 620

Query: 315  NAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
                               V+ ++CVSQGSAWVLK+GD
Sbjct: 621  -------------------VVQELCVSQGSAWVLKSGD 639


>ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Nicotiana tomentosiformis]
          Length = 682

 Score =  557 bits (1435), Expect = e-155
 Identities = 325/704 (46%), Positives = 423/704 (60%), Gaps = 11/704 (1%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP KAP R SRFAPK +K +                                      
Sbjct: 8    FDGPSKAPTRPSRFAPKSSKLKPQPQPVTKPKPGTPSSSSDPPIPTKKEELV-------S 60

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSP 1921
            KP +K     + AA+  +  P+ E   G DD  E E   ++     ED+VVREIDV F+P
Sbjct: 61   KPSVKDHPAENGAAMGKDDVPLDENTTG-DDMAEEEQIAMDTD-SVEDEVVREIDVCFTP 118

Query: 1920 SVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPR 1741
            S DP+ QLY+FQYPLRP+WRPYEL++RC+EVR++P++ ++EVDLAID DSKNFD  +   
Sbjct: 119  SSDPDNQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHA 178

Query: 1740 VQMKKQTLAPSWKPPQ--TSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTA 1567
            V+M+KQTL+ SW P    TSG  VGVL G++LHLNPIHAVVQLRPS +HL E E KK+  
Sbjct: 179  VKMEKQTLSTSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNI 238

Query: 1566 VRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPLKYHSVRSDVAAGYLQKM 1390
              ++    V+ ++ +E KP+G SKKQ K P   KD  E WV LKYH  RSD++A YLQ+M
Sbjct: 239  ATSSDGKTVEKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEM 298

Query: 1389 IAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLLALPLKERFKTWLLEGPP 1216
               EGS + FS S  DYLN++CPG  T  D L      R  L  LPL+ER +TWLLEGPP
Sbjct: 299  AMEEGSPVPFSMSPVDYLNAVCPGRPTDTDRL---KILRTRLSQLPLEERIRTWLLEGPP 355

Query: 1215 LHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRAT 1036
            +HRFD LK+LA D                 QGLWV K++L+Y          K+  +   
Sbjct: 356  IHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIY---------GKNDGLEVL 406

Query: 1035 ARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKL 856
            AR+ +L  FSK+ II       +     A K  L  LA ERP   DWKLKE PD  F  L
Sbjct: 407  ARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVL 466

Query: 855  NPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSDNLAARTSG-- 682
               VVK+QQ  WE + K+ NG+ SGGRN P++K             N +DN+ A   G  
Sbjct: 467  YGDVVKEQQATWECMGKQINGILSGGRNRPALKNP----------LNSNDNIPALPGGGT 516

Query: 681  ---GSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEA 511
               GS  R  M  + RE   KALQK+F+  K CSFQQI Q+L+D AVS     KG AK+A
Sbjct: 517  PAPGSLLRTSMSEKTREALPKALQKVFRIYKACSFQQIRQRLRDVAVS--ESQKGDAKKA 574

Query: 510  VAAASNI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAK 334
            + AA+++ DA P+E+Q+++++VAVNIHG+ V +SSPD PQYD LRKV+IDL +AEGP+AK
Sbjct: 575  ITAANSVNDAPPEEIQAVINQVAVNIHGVYVLKSSPDNPQYDALRKVVIDLLMAEGPSAK 634

Query: 333  LKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            LKKAS+  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 635  LKKASVVEAAKLQLNRDITDIEFKKVMQELCESKNSAWVLRSGD 678


>ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana tomentosiformis]
          Length = 681

 Score =  556 bits (1434), Expect = e-155
 Identities = 324/699 (46%), Positives = 424/699 (60%), Gaps = 6/699 (0%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP KA  R SRFAPK +K +                                      
Sbjct: 8    FDGPSKASTRPSRFAPKSSKLKPQPQPVTKPKPETPLSSSDPPIPTKKEELF-------S 60

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSP 1921
            KP +K     + AA+  +  P+ E   G DD  E E   ++    D D+VVREIDV+F+P
Sbjct: 61   KPSVKDHPAENGAAVGKDDVPLDENTTG-DDVSEEEQVAMDTDSVD-DEVVREIDVFFTP 118

Query: 1920 SVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPR 1741
            S DP +QLY+FQYPLRP+WRPYEL++RC+EVR++P++ ++EVDLA+D+DSKNFD  +   
Sbjct: 119  SSDPNSQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRDSVHA 178

Query: 1740 VQMKKQTLAPSWKPPQ--TSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTA 1567
            V+M+KQTL+ SW P    TSG  VGVL G+KLHLNPIHAVVQLRPS +HL E E KK  A
Sbjct: 179  VKMEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKNIA 238

Query: 1566 VRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPLKYHSVRSDVAAGYLQKM 1390
              ++ +  V+++E +E KP+G SKKQ K P   KD  E WV LKYH  RSD++A YLQ++
Sbjct: 239  TSSDGK-TVENKEVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEI 297

Query: 1389 IAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLLALPLKERFKTWLLEGPP 1216
               EGS + FS S  DYLN++CPG  T  D L      R  L  LPL+ER +TWLLEGPP
Sbjct: 298  AMAEGSPVSFSMSPVDYLNAVCPGRPTDTDRL---KILRTRLSQLPLEERIRTWLLEGPP 354

Query: 1215 LHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRAT 1036
            +HRFD LK+LA D                 QGLWV K++L+Y          K+  +   
Sbjct: 355  IHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIY---------GKNDGLEVL 405

Query: 1035 ARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKL 856
            AR+ +L  FSK+ II       +     A K  L  LA ERP   DWKLKE PD  F  L
Sbjct: 406  ARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVL 465

Query: 855  NPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSDNLAARTSGGS 676
               VVK+QQ  WE + K+ NG+ SGGRN P+MK   +       L  G      + + GS
Sbjct: 466  YGDVVKEQQATWECMGKQINGILSGGRNRPAMKNPLNPNANIPALPGG-----GKPAPGS 520

Query: 675  TPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAAS 496
              R  M  + RE   KALQK+F+  K CSFQQI Q+L+D AVS     KG AK+A+ AA+
Sbjct: 521  LLRTSMSEKTREALPKALQKVFRIYKACSFQQIRQRLRDVAVS--ESQKGDAKKAITAAN 578

Query: 495  NI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKAS 319
            ++ DA P+E+Q+++++VAVNIHG+ V +SSPD PQYD LRKV+IDL +AEGP+AKLKKAS
Sbjct: 579  SVNDAPPEEIQAVINQVAVNIHGVYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKAS 638

Query: 318  INAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            I  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 639  IVEAAKLQLNRDITDIEFKKVMQELCESKNSAWVLRSGD 677


>ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana sylvestris]
          Length = 681

 Score =  556 bits (1433), Expect = e-155
 Identities = 324/699 (46%), Positives = 421/699 (60%), Gaps = 6/699 (0%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP KAP R SRFAPK +K +                                      
Sbjct: 8    FDGPSKAPTRPSRFAPKSSKLKPQPQQVTKPKPETPLSSSDPPIPTKKEELV-------S 60

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYFSP 1921
            KP +K     + AA+  +  P+ E   G DD  E E   ++     ED+VVREIDV+F+P
Sbjct: 61   KPSVKDHPAENGAAMVKDDVPLDENTTG-DDVAEEEQVTMDTD-SVEDEVVREIDVFFTP 118

Query: 1920 SVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADPR 1741
            S DP +QLY+FQYPLR +WRPYEL++RC+EVR++P++ ++EVDLA+D DSKNFD  +   
Sbjct: 119  SSDPNSQLYVFQYPLRSVWRPYELEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRDSVHA 178

Query: 1740 VQMKKQTLAPSWKPPQ--TSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTA 1567
            V+M+KQTL+ SW P    TSG  VGVL G+KLHLNPIHAVVQLRPS +HL E E KK+  
Sbjct: 179  VKMEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKKNI 238

Query: 1566 VRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPLKYHSVRSDVAAGYLQKM 1390
               +    V+++E +E KP+G SKKQ K P   KD  E WV LKYH  RSD++A YLQ+M
Sbjct: 239  ATGSDGKTVENKEVEEKKPAGPSKKQNKPPGNVKDIEEHWVHLKYHGARSDISARYLQEM 298

Query: 1389 IAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLLALPLKERFKTWLLEGPP 1216
               EGS + FS S  DYLN++CPG  T  D L      R  L  LPL+ER +TWLLEGPP
Sbjct: 299  AMEEGSPVSFSMSPIDYLNAVCPGRPTDTDRL---KILRTRLSQLPLEERIRTWLLEGPP 355

Query: 1215 LHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRAT 1036
            +HRFD LK+LA D                 QGLWV K++L+Y          K+  +   
Sbjct: 356  IHRFDALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIY---------GKNDGLEVL 406

Query: 1035 ARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKL 856
            AR+ +L  FSK+ II       +     A K  L  LA ER    DWKLKE PD  F  L
Sbjct: 407  ARNFILFEFSKSTIIKQKVFARRLDFLKAAKPTLKSLAVERLDLNDWKLKEHPDKKFEVL 466

Query: 855  NPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSDNLAARTSGGS 676
               VVK+QQ  WE + K+ NG+ SGGRN P MK   S+A    +   G      + + GS
Sbjct: 467  YGDVVKEQQATWECMGKQINGILSGGRNKPPMKNLNSNANIPALPGGG------KPAPGS 520

Query: 675  TPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAAS 496
              R  M  + RE   KALQK+F+  K CSFQQI Q+L+D AVS     KG AK+A+ AA+
Sbjct: 521  LSRTSMSEKTREALPKALQKVFRIYKACSFQQIRQRLRDVAVS--ESQKGDAKKAITAAN 578

Query: 495  NI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKAS 319
            ++ DA P+E+Q+++++VAVNIHG+ V +SSPD PQYD LRKV+IDL +AEGP+AKLKKAS
Sbjct: 579  SVDDAPPEEIQAVINQVAVNIHGVYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKAS 638

Query: 318  INAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            I  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 639  IVEAAKLQLNRDITDIEFKKVMQELCESKNSAWVLRSGD 677


>ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|802640898|ref|XP_012079065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|643721913|gb|KDP31792.1| hypothetical protein
            JCGZ_12253 [Jatropha curcas]
          Length = 720

 Score =  529 bits (1363), Expect = e-147
 Identities = 308/717 (42%), Positives = 425/717 (59%), Gaps = 26/717 (3%)
 Frame = -2

Query: 2274 GPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE-K 2098
            GPK+ P+RTS+FAPK +KF+                                  + +E +
Sbjct: 11   GPKQVPSRTSKFAPKSSKFKPQPKEKVKTEPSAKPELQESVSVPKVEPQKAFSDKKNEGE 70

Query: 2097 PQMKPKHENSAAA---------IDVELNPVVE-----KVEGP--DDSMEIEAAGIEVQPG 1966
             ++KPK E +            + +E++  VE     KV  P  +D  E EA G E +  
Sbjct: 71   EEVKPKIETAPKTEPSVSNNGHVKMEIDGKVEVRALPKVNDPMDEDKHEEEAEGGEEEE- 129

Query: 1965 DEDKVVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLA 1786
            +ED +VREIDV+F+PS+D +TQLY+ QYPLRP WRPYELD++CEEVRVKP STEV+VDL+
Sbjct: 130  EEDMIVREIDVFFTPSIDSDTQLYVMQYPLRPCWRPYELDEKCEEVRVKPQSTEVQVDLS 189

Query: 1785 IDVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSM 1606
            ID ++ N+D     ++ +KKQTL+ S+ P  T+G  VGVL GNKLHLNPIHAVVQLRPS+
Sbjct: 190  ID-ETTNWDPAQASKLNLKKQTLSSSFMPSCTTGYAVGVLIGNKLHLNPIHAVVQLRPSL 248

Query: 1605 RHLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQ-----KAPEQTKDDREAWVPL 1441
             H++  + K+R     N++  VK  +  E KP G SKKQ      A +Q  D  ++W+ L
Sbjct: 249  EHVNSNDLKRRNIASFNIDPTVKIGDSSEGKPIGPSKKQIKRTEVANDQISDAEKSWISL 308

Query: 1440 KYHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLAL 1261
            KYH  +SD ++ YLQKM+A EGS + F+ S +DY++SLCP  S ++  S    RR LL+L
Sbjct: 309  KYHGSKSDFSSSYLQKMMAEEGSPMEFTMSPYDYMSSLCPVASNNAK-SKGPSRRFLLSL 367

Query: 1260 PLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEAD 1081
            PL+ER K  L+EGPP+ RF  LK+ AP+                 QGLW  +TAL++   
Sbjct: 368  PLEERMKKLLIEGPPVQRFSVLKHFAPEDTVEDVLTVVQKHGQLVQGLWAPRTALLFPDS 427

Query: 1080 NEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANA-MKAVLHGLATERPFF 904
             E+         +  ARD +LLLFSK+ +IS S++   P      ++A L+  A ERP F
Sbjct: 428  KEV--------YKPPARDYILLLFSKSLVISTSQITSLPARLKEPVRAFLNLFAVERPSF 479

Query: 903  KDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNG-LNSGGRNAPSMKTSKSSAPTNL 727
            +DWK KE PD +F+KL+P VVKKQ  +WE +EKK  G L+S  +        + +   NL
Sbjct: 480  RDWKFKESPDAAFMKLHPEVVKKQVVIWEGVEKKLTGFLSSSSKGGKQNDKRQPTLAHNL 539

Query: 726  VLSNGSDNLAARTSGGSTP--RNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFA 553
                    +A +++  +    R  + +E+RE   K L K+ ++ K CSF+ I Q L+D A
Sbjct: 540  TKELDPHKIAPKSASVNRVPIRTTITSESREALLKVLPKVLQTHKVCSFELIRQGLRDLA 599

Query: 552  VSGHARSKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKV 373
            VS     K   + A  AA   DA  +ELQ I+SEVA NIHG  V +SSPD PQYD LRKV
Sbjct: 600  VSQSTLPKADPRIAKLAADGADAPLEELQEIISEVATNIHGSYVLKSSPDHPQYDVLRKV 659

Query: 372  IIDLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            +IDL LA GPNAKLKK+ +  AA + L++ I+ + Y KV+ D C S+ SAWVLK+GD
Sbjct: 660  VIDLLLARGPNAKLKKSEVYEAAKLVLKRDINTTEYTKVMTDFCESKASAWVLKSGD 716


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  526 bits (1354), Expect = e-146
 Identities = 315/715 (44%), Positives = 411/715 (57%), Gaps = 23/715 (3%)
 Frame = -2

Query: 2277 DGPKKAPART-SRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            DGP +AP R  SRFAPK +K                                    ++D+
Sbjct: 7    DGPNRAPVRRPSRFAPKSSK--------------------PKLIPKPEPSSQPEPSKLDD 46

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDS--------MEIEAAG-----IEVQPGDE 1960
               +  K E+S         P+V+K + P  S        ME+EA       +E    DE
Sbjct: 47   VTLINKKEEDSQP-------PLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDE 99

Query: 1959 DKVVREIDVYFSPS-VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAI 1783
            D VVREIDV+F+P   D  T++Y+ QYPLRP WRPYEL +RC+EVRVKP S EVEVDL+I
Sbjct: 100  DPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSI 159

Query: 1782 DVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMR 1603
            DVDSKN+D  A    +MKKQTL+ SWKPPQT+G  VGVL GNKLHLNPIHAVVQLRPSM 
Sbjct: 160  DVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSME 219

Query: 1602 HLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQK-----APEQTKDDREAWVPLK 1438
            +L    +K++  V  +    VK E   E +  G  KKQ        EQ  D  E+WVPLK
Sbjct: 220  YLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLK 279

Query: 1437 YHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLC-PGTSGDSLISNATPRRSLLAL 1261
            YHS  SD +A YLQKM+A + S I F  S ++Y+NSLC PG S D   S    RR LL++
Sbjct: 280  YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 339

Query: 1260 PLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEAD 1081
            PL+ERFKT L EGPP+HRF  LK+ APD                 QGLWV K++L++   
Sbjct: 340  PLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG- 398

Query: 1080 NEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFK 901
                     Q +   ARD +LLLFSK  +I+ S++        A+K  L  LA ERP F+
Sbjct: 399  --------GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFR 450

Query: 900  DWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNG-LNSGGRNAPSMKTS-KSSAPTNL 727
            DWK KE  D+SF+KL+P +V++Q+ VWE++EK+    ++ GGR  P  K S K S     
Sbjct: 451  DWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKT 510

Query: 726  VLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVS 547
              S  SD     T+G    R  M AE RE   KAL+++F+  K CSFQ I Q L+D AVS
Sbjct: 511  GTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 570

Query: 546  GHARSKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVII 367
                 K   +  VAAA   DA  +EL +I+S+ A  +HG+ V ++S +  +++ LRKV++
Sbjct: 571  KSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVV 629

Query: 366  DLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            DLF  + PNAKLK+A I  AA + L+K I    Y KV+ ++C S+GS WVLK+GD
Sbjct: 630  DLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 684


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  523 bits (1347), Expect = e-145
 Identities = 318/716 (44%), Positives = 412/716 (57%), Gaps = 23/716 (3%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP K P R SRFAPK +K +                                      
Sbjct: 5    FDGPSKVPTRQSRFAPKSSKLKP------------------------------------- 27

Query: 2100 KPQMKPK-----HENSAAAIDVELNPVV----EKVEGPDD-SMEIEAAGI-------EVQ 1972
            +P+ KPK     H +SA     E   V       V G DD  +E E  G        +V 
Sbjct: 28   QPETKPKIETLPHSDSAILTKKEELSVSLAENGAVTGNDDVPLEGETTGNYLGEDEGQVT 87

Query: 1971 PGDEDKVVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVD 1792
              D D+VVREIDV  +PS DP TQLY+FQYPLR +WRPYEL++RC+EVR++P++ E+EVD
Sbjct: 88   DSDHDEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVD 147

Query: 1791 LAIDVDSKNFDAGADPRVQMKKQTLAPSWKPPQT--SGCTVGVLTGNKLHLNPIHAVVQL 1618
            LAID+DSKNFD  +     +KKQ L+ SW P  T  SG  VGVL G+KLHLNP+HAVVQL
Sbjct: 148  LAIDLDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQL 207

Query: 1617 RPSMRHLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPL 1441
            RPS R+L E E KK     NN E  V++E+ +E +P G SKKQ K P   KD  E W+ L
Sbjct: 208  RPSKRNLKESELKKNVTT-NNDEKSVENEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHL 266

Query: 1440 KYHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLL 1267
            KYH  RSD++A YLQKM   EGS + FS S  DYLN+  PG  T  D L      R  L 
Sbjct: 267  KYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRL---KILRTRLS 323

Query: 1266 ALPLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYE 1087
             LPL+ER +TWLLEGPP+HRFD LK+LAPD                 QGLWV K++LVY 
Sbjct: 324  QLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVY- 382

Query: 1086 ADNEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPF 907
                      +  +   AR+ VL  F+K  +I  S    +P+   A    L  LA ERP 
Sbjct: 383  --------GTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434

Query: 906  FKDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNL 727
              DWKLKE PD  F  L   VV+++Q  WE + K+ N +  GGRN P+MK   +      
Sbjct: 435  LNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIP 494

Query: 726  VLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVS 547
             L +G      + +  S  R  M  E RE   KALQ++F++ K CSFQQI Q L+   VS
Sbjct: 495  ALPSGD-----KPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 549

Query: 546  GHARSKGFAKEAVAAASNI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVI 370
                 KG  ++A+ A+ ++ DA  +E+Q+++++VAVNIHG+ V +SSPD PQYD LRKV+
Sbjct: 550  KSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVV 609

Query: 369  IDLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            IDLF+AEGP+AKLKKAS+  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 610  IDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  521 bits (1343), Expect = e-145
 Identities = 313/716 (43%), Positives = 413/716 (57%), Gaps = 23/716 (3%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP K P R SRFAPK +K +                                      
Sbjct: 5    FDGPSKVPTRQSRFAPKSSKLKP------------------------------------- 27

Query: 2100 KPQMKPKHEN---SAAAIDVELNPVV------EKVEGPDD-SMEIEAAGIE-------VQ 1972
            +P+ KPK E    S +AI  +   +         V G DD  +E E  G +       V 
Sbjct: 28   QPETKPKIETLPQSDSAISTKKEELTVHLAENRAVTGNDDVPLEGETTGNDLGEDEEQVT 87

Query: 1971 PGDEDKVVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVD 1792
              D D++VREIDV  +PS DP TQLY+FQYPL+ +WRPYEL++RC+EVR++P++ E+EVD
Sbjct: 88   DSDHDEIVREIDVCINPSFDPSTQLYVFQYPLKAVWRPYELEERCQEVRLRPSTAEMEVD 147

Query: 1791 LAIDVDSKNFDAGADPRVQMKKQTLAPSW--KPPQTSGCTVGVLTGNKLHLNPIHAVVQL 1618
            LAID+DSKNFD  +     +KKQ L+ SW   P  TSG  VGVL G+KLHLNP+HAVVQL
Sbjct: 148  LAIDLDSKNFDRDSVHAATVKKQMLSTSWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQL 207

Query: 1617 RPSMRHLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPL 1441
            RPS R+L E E KK   + NN E  V++E+ +E +P G SKKQ K+P   KD  E W+ L
Sbjct: 208  RPSKRNLKESELKK-NIITNNDEKSVENEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHL 266

Query: 1440 KYHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLL 1267
            KYH  RSD++A YLQKM   EGS + FS S  DYLN+ CPG  T  D L      R  L 
Sbjct: 267  KYHGARSDISARYLQKMSMEEGSPVPFSMSPVDYLNAFCPGRPTDTDRL---KILRTRLS 323

Query: 1266 ALPLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYE 1087
             LPL+ER + WLLEGPP+HRFD L +LAPD                 QGLWV K++LVY 
Sbjct: 324  QLPLEERVRIWLLEGPPIHRFDALMHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVY- 382

Query: 1086 ADNEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPF 907
                      +  +   AR+ VL  F+K  +I  S    +P+   A    L  LA ERP 
Sbjct: 383  --------GTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434

Query: 906  FKDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNL 727
              DWKLKE PD  F  L   VV++QQ  WE + K+ N +  GGR  P+MK   +      
Sbjct: 435  LNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPINRNADIT 494

Query: 726  VLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVS 547
             L +G      + +  S  R  M  E RE   KALQ++F++ K CSFQQI Q L+   VS
Sbjct: 495  ALPSGD-----KPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVS 549

Query: 546  GHARSKGFAKEAVAAASNI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVI 370
                 KG  ++A+ A+ ++ DA  +E+Q+++++VAVNIHG+ V +SSPD PQYD LRK++
Sbjct: 550  KSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKIV 609

Query: 369  IDLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            IDLF+AEGP+AKLKKAS+  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 610  IDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 665


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  520 bits (1340), Expect = e-144
 Identities = 315/720 (43%), Positives = 412/720 (57%), Gaps = 28/720 (3%)
 Frame = -2

Query: 2277 DGPKKAPART-SRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            DGP +AP R  SRFAPK +K                                    ++D+
Sbjct: 7    DGPNRAPVRRPSRFAPKSSK--------------------PKLIPKPEPSSQPEPSKLDD 46

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDS--------MEIEAAG-----IEVQPGDE 1960
               +  K E+S         P+V+K + P  S        ME+EA       +E    DE
Sbjct: 47   VTLINKKEEDSQP-------PLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDE 99

Query: 1959 DKVVREIDVYFSPS-VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAI 1783
            D VVREIDV+F+P   D  T++Y+ QYPLRP WRPYEL +RC+EVRVKP S EVEVDL+I
Sbjct: 100  DPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSI 159

Query: 1782 DVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMR 1603
            DVDSKN+D  A    +MKKQTL+ SWKPPQT+G  VGVL GNKLHLNPIHAVVQLRPSM 
Sbjct: 160  DVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSME 219

Query: 1602 HLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQK-----APEQTKDDREAWVPLK 1438
            +L    +K++  V  +    VK E   E +  G  KKQ        EQ  D  E+WVPLK
Sbjct: 220  YLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLK 279

Query: 1437 YHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLC-PGTSGDSLISNATPRRSLLAL 1261
            YHS  SD +A YLQKM+A + S I F  S ++Y+NSLC PG S D   S    RR LL++
Sbjct: 280  YHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSM 339

Query: 1260 PLKERFKTWL-----LEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTAL 1096
            PL+ERFKT L     L+GPP+HRF  LK+ APD                 QGLWV K++L
Sbjct: 340  PLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSL 399

Query: 1095 VYEADNEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATE 916
            ++            Q +   ARD +LLLFSK  +I+ S++        A+K  L  LA E
Sbjct: 400  LFPG---------GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVE 450

Query: 915  RPFFKDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNG-LNSGGRNAPSMKTS-KSS 742
            RP F+DWK KE  D+SF+KL+P +V++Q+ VWE++EK+    ++ GGR  P  K S K S
Sbjct: 451  RPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPS 510

Query: 741  APTNLVLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLK 562
                   S  SD     T+G    R  M AE RE   KAL+++F+  K CSFQ I Q L+
Sbjct: 511  IANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALR 570

Query: 561  DFAVSGHARSKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDEL 382
            D AVS     K   +  VAAA   DA  +EL +I+S+ A  +HG+ V ++S +  +++ L
Sbjct: 571  DLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPL 629

Query: 381  RKVIIDLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            RKV++DLF  + PNAKLK+A I  AA + L+K I    Y KV+ ++C S+GS WVLK+GD
Sbjct: 630  RKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 689


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  518 bits (1333), Expect = e-143
 Identities = 311/710 (43%), Positives = 407/710 (57%), Gaps = 18/710 (2%)
 Frame = -2

Query: 2277 DGPKKAPART-SRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            DGP +AP R  SRFAPK +K                                    ++D+
Sbjct: 7    DGPNRAPVRRPSRFAPKSSK--------------------PKLIPKPEPSSQPEPSKLDD 46

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDS--------MEIEAAG-----IEVQPGDE 1960
               +  K E+S         P+V+K + P  S        ME+EA       +E    DE
Sbjct: 47   VTLINKKEEDSQP-------PLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDE 99

Query: 1959 DKVVREIDVYFSPS-VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAI 1783
            D VVREIDV+F+P   D  T++Y+ QYPLRP WRPYEL +RC+EVRVKP S EVEVDL+I
Sbjct: 100  DPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSI 159

Query: 1782 DVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMR 1603
            DVDSKN+D  A    +MKKQTL+ SWKPPQT+G  VGVL GNKLHLNPIHAVVQLRPSM 
Sbjct: 160  DVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSME 219

Query: 1602 HLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQKAPEQTKDDREAWVPLKYHSVR 1423
            +L    +K++  V  +    VK E   E +  G  KKQ           +WVPLKYHS  
Sbjct: 220  YLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQ-----------SWVPLKYHSSE 268

Query: 1422 SDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLC-PGTSGDSLISNATPRRSLLALPLKER 1246
            SD +A YLQKM+A + S I F  S ++Y+NSLC PG S D   S    RR LL++PL+ER
Sbjct: 269  SDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEER 328

Query: 1245 FKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEIST 1066
            FKT L EGPP+HRF  LK+ APD                 QGLWV K++L++        
Sbjct: 329  FKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG------ 382

Query: 1065 SAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLK 886
                Q +   ARD +LLLFSK  +I+ S++        A+K  L  LA ERP F+DWK K
Sbjct: 383  ---GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFK 439

Query: 885  ELPDLSFIKLNPAVVKKQQEVWENIEKKFNG-LNSGGRNAPSMKTS-KSSAPTNLVLSNG 712
            E  D+SF+KL+P +V++Q+ VWE++EK+    ++ GGR  P  K S K S       S  
Sbjct: 440  EPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTK 499

Query: 711  SDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARS 532
            SD     T+G    R  M AE RE   KAL+++F+  K CSFQ I Q L+D AVS     
Sbjct: 500  SDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSP 559

Query: 531  KGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLA 352
            K   +  VAAA   DA  +EL +I+S+ A  +HG+ V ++S +  +++ LRKV++DLF  
Sbjct: 560  KVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCG 618

Query: 351  EGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            + PNAKLK+A I  AA + L+K I    Y KV+ ++C S+GS WVLK+GD
Sbjct: 619  KEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 668


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  513 bits (1322), Expect = e-142
 Identities = 313/715 (43%), Positives = 407/715 (56%), Gaps = 22/715 (3%)
 Frame = -2

Query: 2280 FDGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            FDGP K P R SRFAPK +K +                                      
Sbjct: 5    FDGPSKVPTRQSRFAPKSSKLKP------------------------------------- 27

Query: 2100 KPQMKPK-----HENSAAAIDVELNPVV----EKVEGPDD-SMEIEAAGI-------EVQ 1972
            +P+ KPK     H +SA     E   V       V G DD  +E E  G        +V 
Sbjct: 28   QPETKPKIETLPHSDSAILTKKEELSVSLAENGAVTGNDDVPLEGETTGNYLGEDEGQVT 87

Query: 1971 PGDEDKVVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVD 1792
              D D+VVREIDV  +PS DP TQLY+FQYPLR +WRPYEL++RC+EVR++P++ E+EVD
Sbjct: 88   DSDHDEVVREIDVCINPSFDPSTQLYVFQYPLRAVWRPYELEERCQEVRLRPSTAEMEVD 147

Query: 1791 LAIDVDSKNFDAGADPRVQMKKQTLAPSWKPPQT--SGCTVGVLTGNKLHLNPIHAVVQL 1618
            LAID+DSKNFD  +     +KKQ L+ SW P  T  SG  VGVL G+KLHLNP+HAVVQL
Sbjct: 148  LAIDLDSKNFDRDSVHAATIKKQMLSTSWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQL 207

Query: 1617 RPSMRHLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQKAPEQTKDDREAWVPLK 1438
            RPS R+L E E KK     NN E  V++E+ +E +P G SKKQ            W+ LK
Sbjct: 208  RPSKRNLKESELKKNVTT-NNDEKSVENEDVKEKRPMGPSKKQH-----------WLHLK 255

Query: 1437 YHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPG--TSGDSLISNATPRRSLLA 1264
            YH  RSD++A YLQKM   EGS + FS S  DYLN+  PG  T  D L      R  L  
Sbjct: 256  YHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRL---KILRTRLSQ 312

Query: 1263 LPLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEA 1084
            LPL+ER +TWLLEGPP+HRFD LK+LAPD                 QGLWV K++LVY  
Sbjct: 313  LPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLVY-- 370

Query: 1083 DNEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFF 904
                     +  +   AR+ VL  F+K  +I  S    +P+   A    L  LA ERP  
Sbjct: 371  -------GTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPDL 423

Query: 903  KDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLV 724
             DWKLKE PD  F  L   VV+++Q  WE + K+ N +  GGRN P+MK   +       
Sbjct: 424  NDWKLKEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPA 483

Query: 723  LSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSG 544
            L +G      + +  S  R  M  E RE   KALQ++F++ K CSFQQI Q L+   VS 
Sbjct: 484  LPSGD-----KPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSK 538

Query: 543  HARSKGFAKEAVAAASNI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVII 367
                KG  ++A+ A+ ++ DA  +E+Q+++++VAVNIHG+ V +SSPD PQYD LRKV+I
Sbjct: 539  SYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVI 598

Query: 366  DLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            DLF+AEGP+AKLKKAS+  AA ++L + I    + KV+ ++C S+ SAWVL++GD
Sbjct: 599  DLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWVLRSGD 653


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
            euphratica]
          Length = 666

 Score =  512 bits (1319), Expect = e-142
 Identities = 281/609 (46%), Positives = 375/609 (61%), Gaps = 5/609 (0%)
 Frame = -2

Query: 2013 DDSMEIEAAGIEVQPGDEDKVVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCE 1834
            +D M+++    E    ++D VVREIDVY++PSVDP TQLY+ QYPLRP WRPYELD+RC+
Sbjct: 96   NDPMDVDK---EEDEDEDDVVVREIDVYYTPSVDPNTQLYVMQYPLRPCWRPYELDERCK 152

Query: 1833 EVRVKPTSTEVEVDLAIDVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNK 1654
            EVRVKP S EVEVDL+ID D+KN+D     R+ MKKQTL+ SW PP  +G  VGVL GNK
Sbjct: 153  EVRVKPQSAEVEVDLSID-DTKNYDPDIASRLNMKKQTLSSSWSPPPATGYAVGVLIGNK 211

Query: 1653 LHLNPIHAVVQLRPSMRHLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQKAP-- 1480
            LHLNPIHAVVQLRPSM +L    SK +       +     E+  E KP G+ KKQ     
Sbjct: 212  LHLNPIHAVVQLRPSMDYLSSGNSKGK-------KNATSGEDSNEGKPLGLPKKQSKQMS 264

Query: 1479 ---EQTKDDREAWVPLKYHSVRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPGTSG 1309
               EQ  D  E+W+PLKYH  +SD++A YLQ M+A E S I F+ S +DY++SLCPG S 
Sbjct: 265  SGNEQKPDVEESWIPLKYHGSKSDLSARYLQNMVAPESSTIEFAMSPYDYMSSLCPGISN 324

Query: 1308 DSLISNATPRRSLLALPLKERFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXX 1129
            +++  N   RR LL+LPL+ER K   LEGPP+HRF  L++L P+                
Sbjct: 325  NNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQL 384

Query: 1128 XQGLWVAKTALVYEADNEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANA 949
             QGLWV KT+L++            + ++  ARD +LLLFSK+ +++ SEL   P     
Sbjct: 385  VQGLWVPKTSLLFP------NPKPTEKVKLAARDYILLLFSKSLVVTPSELNV-PMKPLI 437

Query: 948  MKAVLHGLATERPFFKDWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNSGGRNA 769
            +K+ L+  A ERP FKDWK KE  D  F++L P +V+KQ++ WE + K  +         
Sbjct: 438  LKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGKNISA-------- 489

Query: 768  PSMKTSKSSAPTNLVLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCS 589
             +   +  S   N++               + P+  M  E RE  RKAL K+ ++ K CS
Sbjct: 490  -AFDRAGKSVSKNVI---------------TKPKKTMTDETREALRKALPKVLQTHKVCS 533

Query: 588  FQQISQKLKDFAVSGHARSKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSS 409
            FQ I Q L+  A+S     K   + AVAAAS  +A P+ELQ ++SEVA NIHG  V +SS
Sbjct: 534  FQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSS 593

Query: 408  PDFPQYDELRKVIIDLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQG 229
            P+ P +D LRKV+I LFLA GPNA +KK+ + AAA ++L++    S Y KV+ D+C S+G
Sbjct: 594  PEHPDFDPLRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCESKG 653

Query: 228  SAWVLKTGD 202
            SAWVLK+GD
Sbjct: 654  SAWVLKSGD 662


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  512 bits (1319), Expect = e-142
 Identities = 311/715 (43%), Positives = 408/715 (57%), Gaps = 23/715 (3%)
 Frame = -2

Query: 2277 DGPKKAPART-SRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDE 2101
            DGP +AP R  SRFAPK +K                                    ++D+
Sbjct: 7    DGPNRAPVRRPSRFAPKSSK--------------------PKLIPKPEPSSQPEPSKLDD 46

Query: 2100 KPQMKPKHENSAAAIDVELNPVVEKVEGPDDS--------MEIEAAG-----IEVQPGDE 1960
               +  K E+S         P+V+K + P  S        ME+EA       +E    DE
Sbjct: 47   VTLINKKEEDSQP-------PLVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDE 99

Query: 1959 DKVVREIDVYFSPS-VDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAI 1783
            D VVREIDV+F+P   D  T++Y+ QYPLRP WRPYEL +RC+EVRVKP S EVEVDL+I
Sbjct: 100  DPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSI 159

Query: 1782 DVDSKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMR 1603
            DVDSKN+D  A    +MKKQTL+ SWKPPQT+G  VGVL GNKLHLNPIHAVVQLRPSM 
Sbjct: 160  DVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSME 219

Query: 1602 HLDEKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQKAPEQTKDDREAWVPLKYHSVR 1423
            +L    +K++  V  +    VK E   E +  G  KKQ           +WVPLKYHS  
Sbjct: 220  YLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQ-----------SWVPLKYHSSE 268

Query: 1422 SDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLC-PGTSGDSLISNATPRRSLLALPLKER 1246
            SD +A YLQKM+A + S I F  S ++Y+NSLC PG S D   S    RR LL++PL+ER
Sbjct: 269  SDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEER 328

Query: 1245 FKTWL-----LEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEAD 1081
            FKT L     L+GPP+HRF  LK+ APD                 QGLWV K++L++   
Sbjct: 329  FKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPG- 387

Query: 1080 NEISTSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFK 901
                     Q +   ARD +LLLFSK  +I+ S++        A+K  L  LA ERP F+
Sbjct: 388  --------GQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFR 439

Query: 900  DWKLKELPDLSFIKLNPAVVKKQQEVWENIEKKFNG-LNSGGRNAPSMKTS-KSSAPTNL 727
            DWK KE  D+SF+KL+P +V++Q+ VWE++EK+    ++ GGR  P  K S K S     
Sbjct: 440  DWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKT 499

Query: 726  VLSNGSDNLAARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVS 547
              S  SD     T+G    R  M AE RE   KAL+++F+  K CSFQ I Q L+D AVS
Sbjct: 500  GTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVS 559

Query: 546  GHARSKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVII 367
                 K   +  VAAA   DA  +EL +I+S+ A  +HG+ V ++S +  +++ LRKV++
Sbjct: 560  KSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVV 618

Query: 366  DLFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
            DLF  + PNAKLK+A I  AA + L+K I    Y KV+ ++C S+GS WVLK+GD
Sbjct: 619  DLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCESRGSLWVLKSGD 673


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  506 bits (1303), Expect = e-140
 Identities = 301/680 (44%), Positives = 395/680 (58%), Gaps = 6/680 (0%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            D P + P+R S++APK AKF+                                  E DE+
Sbjct: 8    DKPSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEE 67

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAA--GIEVQPGDEDKVVREIDVYFS 1924
             ++KPK  ++        N    K+E  DDSM+ +    G   +  +ED +VREIDV+F+
Sbjct: 68   EEIKPKIISTPKNEAWLSNNGAVKME-IDDSMDEDKREEGENEEEEEEDMIVREIDVFFT 126

Query: 1923 PSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGADP 1744
            PS+D  TQLY+ QYPLRP WRPYELD+RCEEVRVKP STEVEVDL ID DS N+D     
Sbjct: 127  PSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQAS 185

Query: 1743 RVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKRTAV 1564
            +   KKQTL+ S+ PP+ +G  VGVL GNKLHLNPIHAVVQLRPS+ H++  +SK++ + 
Sbjct: 186  KYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKNSA 245

Query: 1563 RNNVEVVVKSEEHQEAKPSGMSKKQKAPEQTKDDREAWVPLKYHSVRSDVAAGYLQKMIA 1384
              N EV  K E+  E KP G SKKQ            W+ LKYH  +SD ++ YL+KMIA
Sbjct: 246  TLNPEV--KLEDSNEGKPIGSSKKQ-----------CWISLKYHGSKSDFSSRYLEKMIA 292

Query: 1383 REGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWLLEGPPLHRF 1204
            +E S + F+ + +DY++SLCP  S +   S   PRR LL+LPL ER K  +LEGPP+ RF
Sbjct: 293  QESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRF 352

Query: 1203 DTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQAIRATARDR 1024
              LK+ APD                 QGLW  K++L++   N           +   RD 
Sbjct: 353  SVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDANS----------KQGIRDY 402

Query: 1023 VLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLKELPDLSFIKLNPAV 844
            VLLLFSKN +I++S++    +    +K+ L+  A ERP FKDWK KE  D +FIKL P +
Sbjct: 403  VLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDI 462

Query: 843  VKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPT--NLVLSNGSDNLAARTSGGST- 673
            VKKQ+E W+N EK+ + +      A SMK +    P   N V    S+    + + G   
Sbjct: 463  VKKQEEAWDNTEKRLSKVFDRSGKA-SMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRR 521

Query: 672  -PRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAKEAVAAAS 496
              +  +  E RE   KAL K+F+S K CSFQ I Q L+D AVS     K   + AVAAAS
Sbjct: 522  LTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAAS 581

Query: 495  NIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFLAEGPNAKLKKASI 316
              DA P+ELQ I+S+VA NIHG  V +SSP+ PQYDELRKVIIDL LA GPNAKLKKA +
Sbjct: 582  GADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEV 641

Query: 315  NAAANMKLEKAIDQSAYPKV 256
              AA +  ++ +    Y K+
Sbjct: 642  FEAARLAFKRDVTNIEYNKL 661


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  506 bits (1303), Expect = e-140
 Identities = 316/696 (45%), Positives = 405/696 (58%), Gaps = 21/696 (3%)
 Frame = -2

Query: 2280 FDGPKKAP--ARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV 2107
            FDGP K P  +R +RFAPK +K +                                   +
Sbjct: 5    FDGPSKPPPSSRAARFAPKNSKLKPQPKPEPEPEPEPLTDPTIPSKKEE----------I 54

Query: 2106 DEKPQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDKVVREIDVYF 1927
            D KP +  ++ +SA +ID E   V  +    D +MEI  +G       ED+VVREID+YF
Sbjct: 55   DSKPLLTLENGSSAPSIDTEKADVEVQ---QDVAMEIVESG-------EDEVVREIDMYF 104

Query: 1926 SPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDAGAD 1747
            +PS+DP TQLY+ Q P+RP+WRPYEL++RC+EVR++PT+ ++EVDLAID DSKNFD  + 
Sbjct: 105  TPSLDPNTQLYVLQSPMRPVWRPYELEERCKEVRLRPTTAQMEVDLAIDFDSKNFDRDSI 164

Query: 1746 PRVQMKKQTLAPSW--KPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKKR 1573
               +M+KQT++ SW   P  TSG  VGVL G+KLHLNPIH VVQLRPS +HL E E KK 
Sbjct: 165  YAEKMEKQTVSTSWIPVPTGTSGYAVGVLIGDKLHLNPIHTVVQLRPSKQHLKESELKKN 224

Query: 1572 TAVRNNVEVVVKSEEHQEAKPSGMSKKQ-KAPEQTKDDREAWVPLKYHSVRSDVAAGYLQ 1396
             A  N+ E  V++EE +E KP   SKKQ K P   KD  E WV LKYH  RS+++A YLQ
Sbjct: 225  IATSND-EKTVENEEIKENKPVAPSKKQNKPPGNDKDIEEHWVHLKYHGARSEISARYLQ 283

Query: 1395 KMIAREGSQIYFSTS----------SHDYLNSLCPGTSGDSLISNATPRRSLLALPLKER 1246
            +M   EGS I FS S            DYL +LCPG   D+       R  +  LPL ER
Sbjct: 284  RMAMEEGSPIPFSMSLAFFSVNLIHRVDYLRTLCPGRPNDT-DKYKDLRIRVSQLPLDER 342

Query: 1245 FKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEIST 1066
            F+TWL EGPP+HRF  LK+LA D                 QGLWV K++LVY        
Sbjct: 343  FRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVY-------- 394

Query: 1065 SAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKLK 886
              ++      ARD VL  FSK+  I  S    +P+   A    L  LA ERP   DWKLK
Sbjct: 395  -GRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLK 453

Query: 885  ELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSD 706
            E PD  F  L   +VK+QQ  WE + K+  GL +GGRN P+MK            SN S 
Sbjct: 454  EHPDKEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKNP----------SNPSA 503

Query: 705  NLAARTSGGS-TPRNV----MPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGH 541
             + A  SGG  TPR+V    M    RE  +KALQK+F++ K CSFQQI  +L++ AVS +
Sbjct: 504  GIPALPSGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSEN 563

Query: 540  ARSKGFAKEAVAAASNI-DAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIID 364
             R KG AK AVAAAS + DA P+ELQ+++ +VA NIHG  V +SSPD PQYD LRKV+++
Sbjct: 564  DRPKGNAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVE 623

Query: 363  LFLAEGPNAKLKKASINAAANMKLEKAIDQSAYPKV 256
            L + EGP+AKLKKA+I  AA  +L + I  + + KV
Sbjct: 624  LLIGEGPSAKLKKATIMKAAKSELNRDIPPAEFQKV 659


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  504 bits (1297), Expect = e-139
 Identities = 303/706 (42%), Positives = 397/706 (56%), Gaps = 14/706 (1%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDEK 2098
            DGP +   RT++FAPK +KF                                    +  K
Sbjct: 10   DGPSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESISRK 69

Query: 2097 PQMKPKHENSAAAIDVELNPVVEKVEGPDDSMEIEAAGIE---VQPG---DEDKVVREID 1936
               K   E       +      +        MEIE    E   +  G   +ED VVREID
Sbjct: 70   ---KENEEEDIKPPVIAETKTEQSFSNGAVKMEIEEEAKEDVIMNEGNREEEDMVVREID 126

Query: 1935 VYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVDSKNFDA 1756
            V+F+PS+D  TQLY+ QYPLRP WRPYELD+RCEEVRVKP S EVE+DLA+DVDS N+D+
Sbjct: 127  VFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDS 186

Query: 1755 GADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLDEKESKK 1576
                R++M KQTL+ SW PP+T+G  VGVL G+KLHLNPIHAVVQLRPSM HL    SK+
Sbjct: 187  ERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKR 246

Query: 1575 RTAVRNNVEVVVKSEEHQEAKPSGMSKK-----QKAPEQTKDDREAWVPLKYHSVRSDVA 1411
            + A   + EV VK EE  + K +G S K     Q + EQ  DD+E WVPLKYHS ++D +
Sbjct: 247  KNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFS 306

Query: 1410 AGYLQKMIAREGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKERFKTWL 1231
            A YLQ+M+A E  +I F+ S +DY++SLCPG S ++  +    RR LL++PL+ER K  L
Sbjct: 307  AQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPSRRLLLSIPLEERLKKLL 365

Query: 1230 LEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEISTSAKDQ 1051
             EGPP HRF  LK+ APD                 QGLWV K++L++  D          
Sbjct: 366  SEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPED---------- 415

Query: 1050 AIRATARDRVLLLFSKNAIISNSELPP-QPQHANAMKAVLHGLATERPFFKDWKLKELPD 874
              ++ ARD VLLLFSKN IIS +++    P     +K  L  LA ERP FKDWKLKE  D
Sbjct: 416  PYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENAD 475

Query: 873  LSFIKLNPAVVKKQQEVWENIEKK-FNGLNSGGRNAPSMKTSKSSAPTNLVLSNGSDNLA 697
              F KL P +VK Q+++W   E    N +  G +  PS   +K         +  SD   
Sbjct: 476  EGFKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGPS--RTKPGTVIKPEKAMNSDKGV 533

Query: 696  ARTSGGSTPRNVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHARSKGFAK 517
             R +        M  E RE   KAL+K+F++ K CS Q I + L+D A+S     K  A+
Sbjct: 534  RRVAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADAR 593

Query: 516  EAVAAASNIDAFPDELQSILSEVAVNIH-GICVPRSSPDFPQYDELRKVIIDLFLAEGPN 340
              V AA   DA   ELQ ++SEVAV +H G+ V RSSP+ P+YD LR+V+I+L   +G  
Sbjct: 594  MVVKAAYGADAPEHELQEVVSEVAVELHGGLFVLRSSPEHPEYDPLREVVINLLRVKG-- 651

Query: 339  AKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
             KLKKA ++AAA + L++ I  + Y KV+ D C  + S WVLK+GD
Sbjct: 652  -KLKKADVSAAALLSLKREISNNEYNKVMSDFCEYKSSWWVLKSGD 696


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis sativus] gi|700198105|gb|KGN53263.1|
            hypothetical protein Csa_4G038800 [Cucumis sativus]
          Length = 702

 Score =  504 bits (1297), Expect = e-139
 Identities = 299/711 (42%), Positives = 398/711 (55%), Gaps = 19/711 (2%)
 Frame = -2

Query: 2277 DGPKKAPARTSRFAPKGAKFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--VD 2104
            D   + P+RTSRFAPK +KF+                                  +  V+
Sbjct: 7    DEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISKPEVVEPDARVE 66

Query: 2103 EKPQ------MKPKHE----NSAAAIDVELNPVVEKVEGPDDSMEIEAAGIEVQPGDEDK 1954
            EK +      +KPK E    N  A +DVE    VE+    DD    E A        ED 
Sbjct: 67   EKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDAS-------EDM 119

Query: 1953 VVREIDVYFSPSVDPETQLYLFQYPLRPLWRPYELDDRCEEVRVKPTSTEVEVDLAIDVD 1774
            VVREIDV F+PSVD  ++LY+ QYPLRP WRPYE + RC+EVRVKP++ EVEVDL +D++
Sbjct: 120  VVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIE 179

Query: 1773 SKNFDAGADPRVQMKKQTLAPSWKPPQTSGCTVGVLTGNKLHLNPIHAVVQLRPSMRHLD 1594
            S N+D  AD   QMKKQTL  SW+PP  +   VG+L GNKLHLNP+HAVVQLRPS  HL+
Sbjct: 180  SNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLN 239

Query: 1593 EKESKKRTAVRNNVEVVVKSEEHQEAKPSGMSKKQK-----APEQTKDDREAWVPLKYHS 1429
                K++  VR + +  VKSEEH +   +G S+KQK     + E    D E W+PLKY+ 
Sbjct: 240  SGGPKRKNNVRADSD--VKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYG 297

Query: 1428 VRSDVAAGYLQKMIAREGSQIYFSTSSHDYLNSLCPGTSGDSLISNATPRRSLLALPLKE 1249
            + SD++  +LQ M+++  S + FS S HDY++SLCPGTS          ++ LL+L L+E
Sbjct: 298  LESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEE 357

Query: 1248 RFKTWLLEGPPLHRFDTLKYLAPDXXXXXXXXXXXXXXXXXQGLWVAKTALVYEADNEIS 1069
            R K  L EGPP+ RF  LK+ APD                 QGLWV K+  +   D    
Sbjct: 358  RIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGS-- 415

Query: 1068 TSAKDQAIRATARDRVLLLFSKNAIISNSELPPQPQHANAMKAVLHGLATERPFFKDWKL 889
                       ARD VL LFSKN ++S+S++       + +K  L+    ERP FKDWK 
Sbjct: 416  --------GRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKF 467

Query: 888  KELPDLSFIKLNPAVVKKQQEVWENIEKKFNGLNS-GGRNAPSMKTSKSSAPTNLVLSNG 712
            KE  D  F+  +  + +KQ+E+W N+EK F  L S    +  +  T K      L     
Sbjct: 468  KEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVVPKLEKQVS 527

Query: 711  SDNLAARTSGGSTPR-NVMPAEARETTRKALQKLFKSIKTCSFQQISQKLKDFAVSGHAR 535
            SD    ++S     R   M  E RE   KALQKLF++ K CSFQ I Q L+D AVS    
Sbjct: 528  SDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTL 587

Query: 534  SKGFAKEAVAAASNIDAFPDELQSILSEVAVNIHGICVPRSSPDFPQYDELRKVIIDLFL 355
             K  A+ AVAAA  +DA PDEL+ I+S+VA  IHG+ V  SSP+ P+YD LRKV+I L  
Sbjct: 588  PKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLR 647

Query: 354  AEGPNAKLKKASINAAANMKLEKAIDQSAYPKVLHDMCVSQGSAWVLKTGD 202
              GP A LKKA +  A+  +L +AI+ + Y KV++++C+S GS+W LK+GD
Sbjct: 648  GRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGD 698