BLASTX nr result
ID: Perilla23_contig00003868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00003868
(1325 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009770498.1| PREDICTED: replication protein A 70 kDa DNA-... 62 3e-18
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-... 59 3e-16
ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212... 65 5e-16
ref|XP_009801295.1| PREDICTED: replication protein A 70 kDa DNA-... 58 1e-15
ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240... 62 1e-15
ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240... 60 5e-15
ref|XP_012852502.1| PREDICTED: replication protein A 70 kDa DNA-... 59 3e-14
ref|XP_012852512.1| PREDICTED: replication protein A 70 kDa DNA-... 59 3e-14
ref|XP_012852507.1| PREDICTED: uncharacterized protein LOC105972... 54 1e-12
ref|XP_012832889.1| PREDICTED: uncharacterized protein LOC105953... 54 1e-12
ref|XP_003595510.1| replication factor-A carboxy-terminal domain... 62 2e-12
ref|XP_006345613.1| PREDICTED: uncharacterized protein LOC102594... 56 2e-12
ref|XP_003600272.2| replication factor-A carboxy-terminal domain... 64 8e-12
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214... 60 8e-12
ref|XP_003605674.2| replication factor-A carboxy-terminal domain... 63 1e-11
ref|XP_003605675.1| replication factor-A carboxy-terminal domain... 63 1e-11
ref|XP_013455287.1| replication factor-A carboxy-terminal domain... 63 1e-11
dbj|BAF64710.1| putative transposase [Ipomoea tricolor] 51 1e-10
ref|XP_013452088.1| replication factor-A carboxy-terminal domain... 59 3e-10
ref|XP_010668249.1| PREDICTED: replication protein A 70 kDa DNA-... 55 4e-10
>ref|XP_009770498.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 339
Score = 62.4 bits (150), Expect(2) = 3e-18
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNALM 595
RY+L V V+D T +L+LW RE QLIGK +L + D P E+ + ++
Sbjct: 134 RYRLQVRVMDRTTFISLLLWNREAQQLIGKSAKELKEGLVETSDADADYSYPGELDD-IL 192
Query: 596 EKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSHFDSQV 733
+KKF+FKV +K + Y V KVT D + + S F+ +
Sbjct: 193 DKKFMFKVIVKQTNIESQDEVYQVVKVTNDDDLLKEYAHSSFEDTI 238
Score = 58.9 bits (141), Expect(2) = 3e-18
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 199 FWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
+WI K+V++ L+ GW Y+ C KC +++K ++F CKKCN+ D S RY
Sbjct: 85 YWIAAKLVNLKLQRGWSYLGCNKCTRKVEKVGNKFLCKKCNEEDCSVGHRY 135
>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
partial [Nicotiana sylvestris]
Length = 244
Score = 58.9 bits (141), Expect(2) = 3e-16
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
G WIV VV++ LE W Y+ CKKC ++DK +F+CKKC++ D+S RY
Sbjct: 19 GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSSVTHRY 71
Score = 55.5 bits (132), Expect(2) = 3e-16
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNALM 595
RYK V V+D T +L+LW+RE LIGK +L + D P E+++ ++
Sbjct: 70 RYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNEISIETSAVADECSYPVELYD-IL 128
Query: 596 EKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFN 709
+KK LFKV +K++ + Y+V K++ D I ++
Sbjct: 129 DKKVLFKVTVKSSIIKVHAEVYNVVKISEDDNLIQQYS 166
>ref|XP_009759827.1| PREDICTED: uncharacterized protein LOC104212304 [Nicotiana
sylvestris]
Length = 639
Score = 65.1 bits (157), Expect(2) = 5e-16
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +2
Query: 428 IRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNAL 592
IRYKL V V+D T S +L+LW+RE LIGK +L + D P E++N +
Sbjct: 345 IRYKLQVRVMDTTGSVSLLLWDRETMFLIGKSAKELKEGFLENTGAVDKYPYPVELNN-I 403
Query: 593 MEKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFN 709
+++KF+FKV IK + + K YSV K+T + +N ++
Sbjct: 404 LQRKFMFKVIIKTENIHQQKEVYSVVKLTDEEQLMNKYS 442
Score = 48.5 bits (114), Expect(2) = 5e-16
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYC--KKCNKHDASGNIRY 351
G WIV + +++LE GW Y++CKKC ++DK + + C K D S IRY
Sbjct: 293 GPCWIVASIENLELEKGWSYVSCKKCQKKVDKLGNIYQCPNPKYKHEDYSAVIRY 347
>ref|XP_009801295.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 307
Score = 57.8 bits (138), Expect(2) = 1e-15
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD-----DKKDSNDLPAEIHNALM 595
RY+L V V+D T +L+LW RE QLIGK +L + D P+E+ + ++
Sbjct: 118 RYRLQVRVMDRTAFISLLLWNREAQQLIGKSAKELKEGLVETFDADADCSYPSELDD-IL 176
Query: 596 EKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSHFDSQV 733
+KKF+FKV +K + A V KVT D + S F+ +
Sbjct: 177 DKKFMFKVIVKQTNIESQDKACKVVKVTDDDDLQKEYAHSSFEDTI 222
Score = 54.7 bits (130), Expect(2) = 1e-15
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +1
Query: 205 IVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
I K+V+++L+ GW ++ C KC +++K ++F+CKKCN+ D S RY
Sbjct: 71 IAAKLVNLELQRGWSHLGCNKCIKKVEKVGNKFFCKKCNEEDCSVGHRY 119
>ref|XP_009794117.1| PREDICTED: uncharacterized protein LOC104240911 isoform X1
[Nicotiana sylvestris]
Length = 282
Score = 62.0 bits (149), Expect(2) = 1e-15
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNK-----HDASGNIRYIY 357
G +W+V +V V+L+ GW Y+ACK C +L+K ++FYCKKC + H N+ ++Y
Sbjct: 47 GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQIQSVIHRYDYNLYFLY 106
Query: 358 VAF*YYIL 381
YY++
Sbjct: 107 ----YYMI 110
Score = 50.1 bits (118), Expect(2) = 1e-15
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNALM 595
RY+L V V+D T + +L+LW+++ ++I K DL D + P EI N ++
Sbjct: 118 RYRLQVKVMDCTDTISLLLWDKDGTKIIEKSANDLKDVEFETSGAADDSSCPMEIEN-IV 176
Query: 596 EKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
EK+ +FKV++ +++N V ++T D I +
Sbjct: 177 EKRVMFKVEVNSSNNQNKDVVLRVIRLTDDEEIIKKY 213
>ref|XP_009794119.1| PREDICTED: uncharacterized protein LOC104240911 isoform X2
[Nicotiana sylvestris]
Length = 278
Score = 60.1 bits (144), Expect(2) = 5e-15
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNK 324
G +W+V +V V+L+ GW Y+ACK C +L+K ++FYCKKC +
Sbjct: 47 GNYWVVATIVHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 90
Score = 50.1 bits (118), Expect(2) = 5e-15
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNALM 595
RY+L V V+D T + +L+LW+++ ++I K DL D + P EI N ++
Sbjct: 97 RYRLQVKVMDCTDTISLLLWDKDGTKIIEKSANDLKDVEFETSGAADDSSCPMEIEN-IV 155
Query: 596 EKKFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
EK+ +FKV++ +++N V ++T D I +
Sbjct: 156 EKRVMFKVEVNSSNNQNKDVVLRVIRLTDDEEIIKKY 192
>ref|XP_012852502.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
isoform X1 [Erythranthe guttatus]
Length = 274
Score = 58.5 bits (140), Expect(2) = 3e-14
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD-DKKDSNDLPAEIHNALMEKKF 607
RY++ V V D T S L+++++ ++++GK +LI D DK D +D + +A++ K+F
Sbjct: 151 RYRIQVLVFDTTGSTKLVMFDKVVNKIVGKPAKELIGDVDKGDLSDTIPKEFDAIINKEF 210
Query: 608 LFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSH 718
LF +DI A + S+ Y++ ++ D I F H
Sbjct: 211 LFMIDISAMNISKNWSVYTIKSMSADQEVIRQFRAMH 247
Score = 49.3 bits (116), Expect(2) = 3e-14
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 205 IVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
++ KV+D+D + W+Y AC KCY +++ +FYC +C K DA RY
Sbjct: 105 VLAKVIDIDPDTKWWYTACSKCYKKVEHTSAKFYCPRCVK-DADPIPRY 152
>ref|XP_012852512.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
isoform X3 [Erythranthe guttatus]
Length = 257
Score = 58.5 bits (140), Expect(2) = 3e-14
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD-DKKDSNDLPAEIHNALMEKKF 607
RY++ V V D T S L+++++ ++++GK +LI D DK D +D + +A++ K+F
Sbjct: 151 RYRIQVLVFDTTGSTKLVMFDKVVNKIVGKPAKELIGDVDKGDLSDTIPKEFDAIINKEF 210
Query: 608 LFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSH 718
LF +DI A + S+ Y++ ++ D I F H
Sbjct: 211 LFMIDISAMNISKNWSVYTIKSMSADQEVIRQFRAMH 247
Score = 49.3 bits (116), Expect(2) = 3e-14
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 205 IVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
++ KV+D+D + W+Y AC KCY +++ +FYC +C K DA RY
Sbjct: 105 VLAKVIDIDPDTKWWYTACSKCYKKVEHTSAKFYCPRCVK-DADPIPRY 152
>ref|XP_012852507.1| PREDICTED: uncharacterized protein LOC105972105 isoform X2
[Erythranthe guttatus]
Length = 272
Score = 53.9 bits (128), Expect(2) = 1e-12
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 437 KLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD-DKKDSNDLPAEIHNALMEKKFLF 613
++ V V D T S L+++++ ++++GK +LI D DK D +D + +A++ K+FLF
Sbjct: 151 RIQVLVFDTTGSTKLVMFDKVVNKIVGKPAKELIGDVDKGDLSDTIPKEFDAIINKEFLF 210
Query: 614 KVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSH 718
+DI A + S+ Y++ ++ D I F H
Sbjct: 211 MIDISAMNISKNWSVYTIKSMSADQEVIRQFRAMH 245
Score = 48.5 bits (114), Expect(2) = 1e-12
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 205 IVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNK 324
++ KV+D+D + W+Y AC KCY +++ +FYC +C K
Sbjct: 105 VLAKVIDIDPDTKWWYTACSKCYKKVEHTSAKFYCPRCVK 144
>ref|XP_012832889.1| PREDICTED: uncharacterized protein LOC105953753 [Erythranthe
guttatus]
Length = 422
Score = 53.5 bits (127), Expect(2) = 1e-12
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 437 KLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD-DKKDSNDLPAEIHNALMEKKFLF 613
++ V V D T S L+++++ ++++GK +LI D DK D +D + +A++ K+FLF
Sbjct: 199 RIQVLVFDTTGSTKLVMFDKVVNKIVGKPAKELIGDVDKGDLSDTIPKEFDAIINKEFLF 258
Query: 614 KVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSH 718
+DI A + S+ Y++ ++ D I F H
Sbjct: 259 MIDISAMNISKNWSVYTIKSMSADEEVIRQFRAMH 293
Score = 48.5 bits (114), Expect(2) = 1e-12
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 205 IVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNK 324
++ KV+D+D + W+Y AC KCY +++ +FYC +C K
Sbjct: 153 VLAKVIDIDPDTKWWYTACSKCYKKVEHTSAKFYCPRCVK 192
>ref|XP_003595510.1| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|355484558|gb|AES65761.1| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 549
Score = 62.4 bits (150), Expect(2) = 2e-12
Identities = 34/100 (34%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQD--DKKDSNDLPAEIHNALMEKK 604
RY + + VVD T SAT +L++R+ +L K D+I+ D++++P +I A++EK
Sbjct: 338 RYMIKMRVVDHTDSATFVLFDRDAAELFKKTCADMIESCGMGTDASEVPKDI-LAMVEKS 396
Query: 605 FLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTFNTSHFD 724
+LFKV+ ++ Y+ +Y V +VT D + F T + D
Sbjct: 397 YLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKFQTKYKD 436
Score = 39.3 bits (90), Expect(2) = 2e-12
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 199 FWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRYI 354
F V +VD + W+Y +C C ++ E ++C KCNKH + RY+
Sbjct: 292 FGTVNVIVD---DSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVLNVTPRYM 340
>ref|XP_006345613.1| PREDICTED: uncharacterized protein LOC102594974 [Solanum tuberosum]
Length = 324
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 199 FWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKHDASGNIRY 351
+WI KVV + ++ GW + ACKKC +D+ E+++YC KCNK S RY
Sbjct: 83 YWIAAKVVYLKIDHGWSHSACKKCLTVVDQVENRYYCSKCNKEVISIIHRY 133
Score = 45.8 bits (107), Expect(2) = 2e-12
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSN-DLPAEIHNALMEKKF 607
RY L ++V D T +L+ RE QLI K +L + ++ P+E+ + L+EKK
Sbjct: 132 RYNLQMYVTDGTAFISLLFLNREVFQLIEKPAKELNEGLLENVECSYPSELDD-LIEKKL 190
Query: 608 LFKVDIKAAHNSEYKGAYSVCKVTTDLTYIN---------TFNTSHFD 724
+FKV I+ ++ S+ Y V + T D T + T N S FD
Sbjct: 191 MFKVMIEESNISKKDDVYKVIEFTNDETLLKKYCQPSIQVTLNDSSFD 238
>ref|XP_003600272.2| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|657393132|gb|AES70523.2| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 719
Score = 63.9 bits (154), Expect(2) = 8e-12
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = +2
Query: 422 LYIRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSNDLPAEIHNALMEK 601
++ RY + V VVD++ AT +L++R+ L K D+++ + D LP EI AL+
Sbjct: 492 VFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEGVLPTEI-GALVNC 550
Query: 602 KFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
+LFKV+ K A + ++ ++ V KV TD IN F
Sbjct: 551 TYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQF 585
Score = 35.4 bits (80), Expect(2) = 8e-12
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKH 327
G + ++G V + + W+Y AC C + E +C+KCN+H
Sbjct: 445 GMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFCEKCNRH 488
>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
sylvestris]
Length = 213
Score = 60.5 bits (145), Expect(2) = 8e-12
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = +1
Query: 190 IGRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNK 324
+G +W+V ++ V+L+ GW Y+ACK C +L+K ++FYCKKC +
Sbjct: 85 LGNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKKCEQ 129
Score = 38.9 bits (89), Expect(2) = 8e-12
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQ-----DDKKDSNDLPAEIHNALM 595
RY+L V V+D T + +L+LW+++ ++IGK DL D + P EI N ++
Sbjct: 136 RYRLQVKVMDCTGTISLLLWDKDATKIIGKSANDLKDVVFETSGAADDSSCPMEIEN-IV 194
Query: 596 EKKFLFKV 619
EK K+
Sbjct: 195 EKGSCLKL 202
>ref|XP_003605674.2| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|657387165|gb|AES87871.2| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 560
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = +2
Query: 422 LYIRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSNDLPAEIHNALMEK 601
++ RY + V VVD++ AT +L++R+ L K D+++ + D LP EI AL+
Sbjct: 333 VFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEGVLPTEI-AALVNC 391
Query: 602 KFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
+LFKV+ K A + ++ ++ V KV TD IN F
Sbjct: 392 TYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQF 426
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKH 327
G + ++G V + + W+Y AC C + E +C+KCN+H
Sbjct: 286 GMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFCEKCNRH 329
>ref|XP_003605675.1| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|355506730|gb|AES87872.1| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 480
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = +2
Query: 422 LYIRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSNDLPAEIHNALMEK 601
++ RY + V VVD++ AT +L++R+ L K D+++ + D LP EI AL+
Sbjct: 253 VFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEGVLPTEI-AALVNC 311
Query: 602 KFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
+LFKV+ K A + ++ ++ V KV TD IN F
Sbjct: 312 TYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQF 346
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKH 327
G + ++G V + + W+Y AC C + E +C+KCN+H
Sbjct: 206 GMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFCEKCNRH 249
>ref|XP_013455287.1| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|657387166|gb|KEH29318.1| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 417
Score = 63.2 bits (152), Expect(2) = 1e-11
Identities = 34/95 (35%), Positives = 55/95 (57%)
Frame = +2
Query: 422 LYIRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSNDLPAEIHNALMEK 601
++ RY + V VVD++ AT +L++R+ L K D+++ + D LP EI AL+
Sbjct: 190 VFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADILETHRADEGVLPTEI-AALVNC 248
Query: 602 KFLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
+LFKV+ K A + ++ ++ V KV TD IN F
Sbjct: 249 TYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQF 283
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKKCYARLDKQEHQFYCKKCNKH 327
G + ++G V + + W+Y AC C + E +C+KCN+H
Sbjct: 143 GMYVVLGTVKQIVNPENWYYTACM-CNKSVYPAEGMHFCEKCNRH 186
>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
Length = 517
Score = 51.2 bits (121), Expect(2) = 1e-10
Identities = 28/93 (30%), Positives = 49/93 (52%)
Frame = +2
Query: 428 IRYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKDSNDLPAEIHNALMEKKF 607
+RY++ V VD +A ILW++EC +L+G TDL Q + +P EI +L+
Sbjct: 343 LRYRVKVRAVDLDGNAPFILWDKECTELLGISATDLRQKILEGPLRIPREI-ESLVGLAM 401
Query: 608 LFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
LF++ ++ A++V KV D ++ +
Sbjct: 402 LFRIAVRKEQFDNLHNAFAVMKVMNDPKLVSVY 434
Score = 43.9 bits (102), Expect(2) = 1e-10
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 193 GRFWIVGKVVDVDLEDGWFYIACKK--CYARLDKQEHQFYCKKCNKHDASGNIRY 351
G FW+ K+V ++ WFY++CK C +L + + C KC + G +RY
Sbjct: 291 GDFWVAAKIVGIESSWDWFYVSCKSHGCNKKLTLRNTLYDCDKCKRTWQEGILRY 345
>ref|XP_013452088.1| replication factor-A carboxy-terminal domain protein [Medicago
truncatula] gi|657382186|gb|KEH26116.1| replication
factor-A carboxy-terminal domain protein [Medicago
truncatula]
Length = 428
Score = 58.5 bits (140), Expect(2) = 3e-10
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKKD-SNDLPAEIHNALMEKKF 607
RY + V V+DET SAT ++++R+ L+ K D+I+ D S LP EI ++L+E F
Sbjct: 203 RYMIKVRVIDETDSATFVIFDRDATLLLKKTAADVIESMGSDESGTLPKEI-SSLVESTF 261
Query: 608 LFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF 706
LFKV+ + ++ ++ +Y V +++ ++ + F
Sbjct: 262 LFKVETNISTDARFEKSYRVRRISNNVDLLKRF 294
Score = 35.4 bits (80), Expect(2) = 3e-10
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 238 DGWFYIACKKCYARLDKQEHQFYCKKCNKH 327
D W+Y AC C ++ E F+C KCNKH
Sbjct: 168 DEWWYTACV-CNKKVVPDEKMFFCAKCNKH 196
>ref|XP_010668249.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like,
partial [Beta vulgaris subsp. vulgaris]
Length = 511
Score = 55.5 bits (132), Expect(2) = 4e-10
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Frame = +2
Query: 431 RYKLTVHVVDETFSATLILWERECHQLIGKRVTDLIQDDKK--DSNDLPAEIHNALMEKK 604
R+K+ V VVD + SA+ ++++RE ++ K +D+ K DS P E+ NAL+ ++
Sbjct: 359 RFKIQVRVVDGSGSASFVMFDREVKSIVHKSASDVNVSLTKIIDSETYPEEL-NALVNRR 417
Query: 605 FLFKVDIKAAHNSEYKGAYSVCKVTTDLTYINTF-NTSHFDSQV*SYT 745
FLFKV++ + ++ Y+V K+T + I +F N+S D + S T
Sbjct: 418 FLFKVEVSEYNLTQNWPVYTVVKMTDNENIIESFLNSSTGDQEPISIT 465
Score = 38.1 bits (87), Expect(2) = 4e-10
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 18/54 (33%)
Frame = +1
Query: 217 VVDVDLEDGWFYIACKKCYARL------------DKQEH------QFYCKKCNK 324
+V V E GWFY+ACKKC ++ D+ ++ ++YCKKC+K
Sbjct: 298 IVCVQFEYGWFYLACKKCNKKVVVEGEIKTECDGDQSDNGTTKVTKWYCKKCSK 351