BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00002452
         (3203 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092216.1| PREDICTED: phytochrome A [Sesamum indicum] g...  1733   0.0  
gb|AAR08426.1| phytochrome A [Orobanche minor]                       1628   0.0  
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...  1616   0.0  
ref|NP_001234490.1| Phytochrome A [Solanum lycopersicum] gi|9378...  1607   0.0  
ref|XP_012859039.1| PREDICTED: phytochrome A-like [Erythranthe g...  1607   0.0  
ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|7657416...  1603   0.0  
ref|XP_009622127.1| PREDICTED: phytochrome A1 [Nicotiana tomento...  1600   0.0  
ref|XP_009769439.1| PREDICTED: phytochrome A1 [Nicotiana sylvest...  1599   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1598   0.0  
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                      1597   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1595   0.0  
gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]                      1594   0.0  
gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]                      1592   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1591   0.0  
gb|ACC60969.1| phytochrome A [Vitis riparia]                         1590   0.0  
emb|CDP17750.1| unnamed protein product [Coffea canephora]           1586   0.0  
ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906...  1582   0.0  
ref|XP_012839835.1| PREDICTED: phytochrome A-like [Erythranthe g...  1579   0.0  
gb|AJA72481.1| phytochrome A [Ipomoea purpurea]                      1572   0.0  
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...  1568   0.0  

>ref|XP_011092216.1| PREDICTED: phytochrome A [Sesamum indicum]
            gi|747089179|ref|XP_011092218.1| PREDICTED: phytochrome A
            [Sesamum indicum]
          Length = 1122

 Score = 1733 bits (4488), Expect = 0.0
 Identities = 861/991 (86%), Positives = 909/991 (91%), Gaps = 3/991 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SSQRGQSS NSARSRHS RIIAQTSIDAKLHA             SVR TNV   +QRP+
Sbjct: 3    SSQRGQSSINSARSRHSTRIIAQTSIDAKLHADFEESGSSFDYSSSVRVTNVPSGDQRPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV
Sbjct: 63   SDKVTTAYLHQIQKGKLIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIGSDI+ +FT+PSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGSDIKAIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKPHEVPMTAAGALQSYKLAAKAITRLQ LPSGS+ERLCDTM QEVFELTGYDRVMIY
Sbjct: 183  EPVKPHEVPMTAAGALQSYKLAAKAITRLQALPSGSVERLCDTMVQEVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEVFTE+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRANH+KVVQ
Sbjct: 243  KFHDDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHIKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPESTHPEKRKRL 1899
            DE LP DLTLCGSTLRAPH+CHLQYMENMNSIASLVMSVVVNEGDEE  +S+HPEKRKRL
Sbjct: 303  DEKLPFDLTLCGSTLRAPHTCHLQYMENMNSIASLVMSVVVNEGDEEGSDSSHPEKRKRL 362

Query: 1898 WGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 1719
            WGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL
Sbjct: 363  WGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 422

Query: 1718 RDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTGL 1539
            RDAPLGIVSQSPN+MDLVKCDGA LLYK KKYR+G+TP+DFQIRDIVSWLDEYHRDSTGL
Sbjct: 423  RDAPLGIVSQSPNIMDLVKCDGAALLYKNKKYRLGLTPTDFQIRDIVSWLDEYHRDSTGL 482

Query: 1538 STDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG 1359
            STDSLYDAGFPGALALGDA+CGMA VKI+DKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG
Sbjct: 483  STDSLYDAGFPGALALGDAVCGMAGVKISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG 542

Query: 1358 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKLN 1179
            RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAE  + DT  IH +LN
Sbjct: 543  RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAEVKESDTNTIHTRLN 602

Query: 1178 DLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQHF 999
            +LQI+GIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGL V+ AIG+HF
Sbjct: 603  ELQIDGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLPVNEAIGRHF 662

Query: 998  LSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKENV 819
            L+LVE+SSAD VS ML+LA+ GKEERNVQFEIKTHG RSESGPISLVVNACASRDVKENV
Sbjct: 663  LALVEESSADTVSKMLELALQGKEERNVQFEIKTHGPRSESGPISLVVNACASRDVKENV 722

Query: 818  VGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTKV 639
            VGVCFIAQDITAQKS+MDKFTRIEGDY+A           IFGTDEFGWCSEWNAAMTK+
Sbjct: 723  VGVCFIAQDITAQKSVMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNAAMTKI 782

Query: 638  SGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSRS 459
            SGW RDDV+N+MLLGEVFG  R+CCRLKNQEAYVNLGI LNNAVTG D+EK+PFGFFSRS
Sbjct: 783  SGWRRDDVINRMLLGEVFGINRACCRLKNQEAYVNLGIVLNNAVTGQDSEKIPFGFFSRS 842

Query: 458  GKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIRK 279
            GKYVECLLCVSK+LD EG VTG+FCF           LH+QRLSE TA+KRL+VL+YIR+
Sbjct: 843  GKYVECLLCVSKKLDAEGAVTGLFCFLQLASQELQQALHIQRLSEQTALKRLRVLAYIRR 902

Query: 278  EIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLEM 99
            EIRNPLSGIIF+RKMMEGT+LDDEQ NLLRTSL CQRQLNKILDDTDLDHIIEGYLDLEM
Sbjct: 903  EIRNPLSGIIFSRKMMEGTDLDDEQKNLLRTSLCCQRQLNKILDDTDLDHIIEGYLDLEM 962

Query: 98   VEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            VEF L EVLIA+ISQVMMKSNGKGI IVD+L
Sbjct: 963  VEFNLPEVLIAAISQVMMKSNGKGIMIVDNL 993


>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score = 1628 bits (4215), Expect = 0.0
 Identities = 806/992 (81%), Positives = 886/992 (89%), Gaps = 4/992 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVE---QRPR 2799
            SSQ G+SSTNSA+SR SARIIAQTSIDAKL A             SVR TN       PR
Sbjct: 3    SSQPGRSSTNSAQSRQSARIIAQTSIDAKLDADFEESGSSFDYSTSVRVTNYPAGLSEPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQ FGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHP+
Sbjct: 63   SDKVTTAYLHQIQKGKLIQQFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPL 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIGSDIRT+FT+PSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGSDIRTIFTAPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKPHEVPMTAAGALQSYKLAAKAI  LQ LP GS+ERLCDTM Q+VFELTGYDRVMIY
Sbjct: 183  EPVKPHEVPMTAAGALQSYKLAAKAIACLQALPGGSIERLCDTMVQQVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFHEDDHGEVFTE+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ
Sbjct: 243  KFHEDDHGEVFTEITKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPESTH-PEKRKR 1902
            D+NLP DLTLCGSTLRAPH CH QYMENMNSIASLVMSVVVNEGDE+ P+S+  P KRKR
Sbjct: 303  DDNLPFDLTLCGSTLRAPHGCHSQYMENMNSIASLVMSVVVNEGDEDGPDSSSGPYKRKR 362

Query: 1901 LWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1722
            LWGLVVCH+T PRF+PFPLRYACEFL QVF+IHVNKELELENQMLEKNILRTQTLLCD+L
Sbjct: 363  LWGLVVCHNTCPRFIPFPLRYACEFLVQVFSIHVNKELELENQMLEKNILRTQTLLCDLL 422

Query: 1721 LRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTG 1542
            LRD PLGIVSQSPNVMDLVKCDGA LL+K  KYR+G+TP+DFQIRDIVSWLDEYH+DSTG
Sbjct: 423  LRDVPLGIVSQSPNVMDLVKCDGAILLHKRTKYRLGLTPTDFQIRDIVSWLDEYHQDSTG 482

Query: 1541 LSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDD 1362
            LSTDSLYDAGFPGALALG+A+CGMAAVKITD+DWLFWFRSHTAAEIRWGGAKHE   KDD
Sbjct: 483  LSTDSLYDAGFPGALALGNALCGMAAVKITDEDWLFWFRSHTAAEIRWGGAKHELEAKDD 542

Query: 1361 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKL 1182
            GRKMHPRSSF+AFLEVVKTRSLPWKDYEMD IHSLQLILRNA+KE+E  DL+++ IHA+L
Sbjct: 543  GRKMHPRSSFRAFLEVVKTRSLPWKDYEMDGIHSLQLILRNAYKESEEKDLESREIHARL 602

Query: 1181 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQH 1002
            N+LQI+G++E+EAVTSEMVRLIETA+VPI +V VDGLVNGWNTKI+DLTGL+V  AIG H
Sbjct: 603  NELQIDGVKEIEAVTSEMVRLIETATVPIFSVGVDGLVNGWNTKISDLTGLSVVEAIGMH 662

Query: 1001 FLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKEN 822
            FL+LVEDSSAD VS ML LA+ GKEE +VQFEIKTHG+RSESGPISL+VNACAS+DVKEN
Sbjct: 663  FLALVEDSSADTVSKMLGLALQGKEEHDVQFEIKTHGQRSESGPISLIVNACASKDVKEN 722

Query: 821  VVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTK 642
            VVGVCFIAQDIT QKSMMDKFTRIEGDY++           IFGTDEFGWCSEWNAAM K
Sbjct: 723  VVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGTDEFGWCSEWNAAMIK 782

Query: 641  VSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSR 462
            +SGW R+ V++KMLLGEVFG  ++CCRLKNQEAYVNLG+ LNN VTG ++ K+ FGFFSR
Sbjct: 783  LSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTVTGQESGKVSFGFFSR 842

Query: 461  SGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIR 282
            SGKYV CLLCVSK++D+EG+VTG+FCF           LH+QR+SE TA KRL+VL+YIR
Sbjct: 843  SGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRISEQTASKRLRVLAYIR 902

Query: 281  KEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 102
            +EIR+PLSGIIF+RK+MEGT+L+DEQ N++RTSLHCQ Q+NKIL+DTDLDHIIEGYLDLE
Sbjct: 903  REIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILEDTDLDHIIEGYLDLE 962

Query: 101  MVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            MVEFKLHEVLIASISQV+ KSNGKGI IVD+L
Sbjct: 963  MVEFKLHEVLIASISQVISKSNGKGIKIVDNL 994


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1616 bits (4185), Expect = 0.0
 Identities = 795/993 (80%), Positives = 884/993 (89%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST S+RS+HSARIIAQTSIDAKLHA             SVR TNV   EQRP+
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+HPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PS AAL KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEE  + +S+  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDL+KCDGA LLYK K +R+GM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGDA+CGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+A++ + +T +IH K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGL VD AIG+
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D V+ ML+LA+ GKEERNV+FEIKTHG   +S PISL+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QKS+MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDVM+KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R GKYVECLLCVSKRLD EG VTG+FCF           LHVQRLSE TA+KRLKVL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGT+L +EQ N+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQVMMKSNGK I I +D+
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDM 995


>ref|NP_001234490.1| Phytochrome A [Solanum lycopersicum] gi|937834149|ref|NP_001303237.1|
            Phytochrome A [Solanum lycopersicum]
            gi|723736002|ref|XP_010327392.1| PREDICTED: alternative
            transcript type 3 isoform X1 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1607 bits (4161), Expect = 0.0
 Identities = 790/993 (79%), Positives = 882/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST S+RS+HSARI+AQTSIDAKLHA             SVR T+V   E++P+
Sbjct: 3    SSRPSQSSTTSSRSKHSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+HPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PS AAL KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFHEDDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHEDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEE  + +S+  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDLVKCDGA LLYK K +R+GM PSDFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGDA+CGMAAV+I+DKDWLFWFRSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+AE  + +T +I+ K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELE+VT+EMVRLIETA VPILAVDVDG VNGWNTKIA+LTGL VD AIG+
Sbjct: 603  LNDLKIDGMQELESVTAEMVRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGK 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D V+ ML+LA+ GKEE+NV+FEIKTHG   +S PISL+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            NVVGVCF+A DIT QKS+MDKFTRIEGDY+A           IFGTD+FGWCSEWN AMT
Sbjct: 723  NVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDVM+KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG ++EK+PFGFF+
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R GKYVECLLCVSKRLD EG VTG+FCF           L+VQRLSE TA+KRLKVL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGT+L +EQ N+L TS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQVMMKSNGK I I +D+
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDM 995


>ref|XP_012859039.1| PREDICTED: phytochrome A-like [Erythranthe guttatus]
            gi|848926578|ref|XP_012859040.1| PREDICTED: phytochrome
            A-like [Erythranthe guttatus] gi|604299459|gb|EYU19354.1|
            hypothetical protein MIMGU_mgv1a000485mg [Erythranthe
            guttata]
          Length = 1125

 Score = 1607 bits (4160), Expect = 0.0
 Identities = 800/994 (80%), Positives = 875/994 (88%), Gaps = 6/994 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVEQR----- 2805
            S Q GQSSTN+ARSRH+ARIIAQTS DAKLHA             SVR T    +     
Sbjct: 3    SPQPGQSSTNTARSRHTARIIAQTSTDAKLHADFDQSGTSFDYSTSVRLTKAPTKGALEP 62

Query: 2804 PRSDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDH 2625
             RS+K TT YLHQIQKG  IQPFGCLLALDEKTFRVIAYSENAPEMLTMV+HAVP+V D 
Sbjct: 63   TRSNKVTTAYLHQIQKGTLIQPFGCLLALDEKTFRVIAYSENAPEMLTMVTHAVPNVNDQ 122

Query: 2624 PVLGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII 2445
            PVL IGSDIR++FT+PS AAL KALGFGEVSLLNPILVHCK+SGKP+YAIVHRVTGSLI+
Sbjct: 123  PVLSIGSDIRSIFTAPSGAALQKALGFGEVSLLNPILVHCKSSGKPYYAIVHRVTGSLIV 182

Query: 2444 DFEPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVM 2265
            DFEPVKP EVPMTAAGALQSYKLAAKAI RLQ+LPSGSMERLCDTM QEVFELTGYDRVM
Sbjct: 183  DFEPVKPDEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM 242

Query: 2264 IYKFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 2085
             YKFH+DDHGEV TE+ KPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV
Sbjct: 243  AYKFHDDDHGEVLTEITKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKV 302

Query: 2084 VQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPESTHPEKRK 1905
            VQDE+LP +LTLCGSTLRAPHSCHLQYMENM SIASLVMSVVVNEG EE P  +   KRK
Sbjct: 303  VQDEHLPFNLTLCGSTLRAPHSCHLQYMENMGSIASLVMSVVVNEGAEEEPSPSDSSKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+TSPRFVPFPLRYACEFLAQVFAIHVNKELELENQ+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            LLRDAPLGIVS+SPNVMDLVKCDGA LLYK K+YRMGMTP+DFQIRDIVSWLDEYHRDST
Sbjct: 423  LLRDAPLGIVSRSPNVMDLVKCDGALLLYKNKRYRMGMTPTDFQIRDIVSWLDEYHRDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGDA+CG+AAVKIT++DWLFWFRSHTA+E+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGVAAVKITERDWLFWFRSHTASEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSF AFLEVVKTRSLPWK+YEMDAIHSLQLILRNAFKEA+  D +T+ IH K
Sbjct: 543  DGRKMHPRSSFNAFLEVVKTRSLPWKEYEMDAIHSLQLILRNAFKEADEKDSNTQEIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LND++IEGIQELEAVTSEMVRLIETASVPILAVD +GLVNGWN KIADLTGL V++AI +
Sbjct: 603  LNDMRIEGIQELEAVTSEMVRLIETASVPILAVDSNGLVNGWNQKIADLTGLRVEDAIER 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            HFL+LVE+S AD V+  L LA+ GKEERN++FEIKTHG RSE GPISLVVNACASRDVKE
Sbjct: 663  HFLTLVEESCADTVNKTLALALQGKEERNIEFEIKTHGSRSECGPISLVVNACASRDVKE 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            NVVGVCFIAQD+TAQKSMMDKFTRIEG+YKA           IFGTDEFGWCSEWN +M 
Sbjct: 723  NVVGVCFIAQDVTAQKSMMDKFTRIEGEYKAIVQNPNPLIPPIFGTDEFGWCSEWNPSMI 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGT-IRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFF 468
            K+SGW R D+++KML+GEVFG   ++CC LKNQEA VNLGIALN+AVTG D+EK+PFGFF
Sbjct: 783  KLSGWDRQDMIDKMLIGEVFGVHNKACCCLKNQEALVNLGIALNSAVTGQDSEKIPFGFF 842

Query: 467  SRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSY 288
            SR+GKY+ECLL VSK+LD EG VTG+FCF           +H+QRLSE TA+K+ +VL+Y
Sbjct: 843  SRNGKYIECLLSVSKKLDGEGAVTGLFCFLHLASQELQQAIHIQRLSEQTALKKSRVLAY 902

Query: 287  IRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLD 108
            I+KEI NP++GI FTRKMMEGT LD+EQ  LL+ SLHCQ QLNKIL+DTDLDHIIEGYLD
Sbjct: 903  IKKEISNPVAGIKFTRKMMEGTELDEEQKKLLQISLHCQHQLNKILEDTDLDHIIEGYLD 962

Query: 107  LEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            LEM EFKLH+VLIASISQVMMKSN KGI IVD L
Sbjct: 963  LEMTEFKLHDVLIASISQVMMKSNEKGIMIVDKL 996


>ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|76574169|gb|ABA46868.1|
            phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1603 bits (4152), Expect = 0.0
 Identities = 788/993 (79%), Positives = 879/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSS  S+RS+HSARIIAQTSIDAKLHA             SVR T+V   E+RP+
Sbjct: 3    SSRPSQSSATSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQPFG LLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+HPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PS AAL KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENMNS+ASLVM+VVVN+GDEE  + +S+  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDLVKCDGA LLYK K +R+GM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGDA+CGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNAFK+A++ + +T +IH K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EM+RLIETASVPI AVDVDG VNGWNTK+A+LTGL VD AIG+
Sbjct: 603  LNDLRIDGMQELEAVTAEMIRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D V+ ML+LA+ GKEERNV+FEIK HG   +S PISL+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QKS+MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDVM+KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG ++EK+PFGFF 
Sbjct: 783  KLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFG 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R GKYVECLLCVSKRLD EG VTG+FCF           LHVQRLSE TA+KRLKVL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++I+NPLSGIIF+ KM+EGT+L +EQ N+L TS  CQRQLNKILDDTDLD IIEGYLDL
Sbjct: 903  RRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQVMMKSNGK I I +D+
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDM 995


>ref|XP_009622127.1| PREDICTED: phytochrome A1 [Nicotiana tomentosiformis]
            gi|697136117|ref|XP_009622128.1| PREDICTED: phytochrome
            A1 [Nicotiana tomentosiformis]
            gi|697136119|ref|XP_009622129.1| PREDICTED: phytochrome
            A1 [Nicotiana tomentosiformis]
          Length = 1123

 Score = 1600 bits (4142), Expect = 0.0
 Identities = 788/993 (79%), Positives = 879/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST SARS+HSARIIAQT+IDAKLHA             SVR T+V   E++P+
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SD+ TT YL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG+ P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PSAAAL KALGFGEVSLLNP+LVHCKTSGKPFYAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPFYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV  E+ KPGL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENM+SIASLVM+VVVN+GDEE  + +ST  +KRK
Sbjct: 303  DEKLPYDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDLVKCD A LLYK K +R+GMTPSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDAAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDS+YDAGFPGALALGDA+CGMAAV+I+DKDWLFWFRSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSMYDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA K+A++ D +T  IH K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNASKDADAMDSNTNTIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGL VD AIG 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D VS ML+LA+ GKEERNV+FEIKTHG   +S PISL+VNACASRDV +
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGLSGDSSPISLIVNACASRDVGD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDV++KMLLGEVFGT  +CCR KNQEA+VN G+ LNNA+TG + EK+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQGACCRFKNQEAFVNFGVVLNNAMTGQECEKISFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R+GKYVECLLCVSK+LD EG VTG+FCF           LHVQRLSE TA+KRLKVL+YI
Sbjct: 843  RNGKYVECLLCVSKKLDREGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGTNL +EQ N+L TS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILHTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQ+MMKSNGK I IV+D+
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDM 995


>ref|XP_009769439.1| PREDICTED: phytochrome A1 [Nicotiana sylvestris]
            gi|698551835|ref|XP_009769440.1| PREDICTED: phytochrome
            A1 [Nicotiana sylvestris]
          Length = 1124

 Score = 1599 bits (4140), Expect = 0.0
 Identities = 787/993 (79%), Positives = 879/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST SARS+HSARIIAQT+IDAKLHA             SVR T+V   E++P+
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SD+ TT YL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG+ P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PSAAAL KALGFGEVSLLNP+LVHCKTSGKP+YAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV  E+ KPGL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENM+SIASLVM+VVVN+GDEE  + +ST  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDLVKCDGA LLYK K +R+GMTPSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGD +CGMAAV+I+DK WLFW+RSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA K+A++ D +T  IH K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGL VD AIG 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D VS ML+LA+ GKEERNV+FEIKTHG   +S PISL+VNACASRDV +
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDV++KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG +  K+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R+GKYVECLLCVSKRLD EG VTG+FCF           LH+QRLSE TA+KRLKVL+YI
Sbjct: 843  RNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGTNL +EQ N+LRTS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQ+MMKSNGK I IV+D+
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDM 995


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1598 bits (4138), Expect = 0.0
 Identities = 788/993 (79%), Positives = 877/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST S+RS+HSARIIAQTSIDAKLHA             SVR TNV   EQRP+
Sbjct: 3    SSRPSQSSTTSSRSKHSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQKGK IQPFGCLLALDEKT +VIA+SENAPEMLTMVSHAVPSVG+HPV
Sbjct: 63   SDKVTTAYLHQIQKGKFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG DIRT+FT PS AAL KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLIIDF
Sbjct: 123  LGIGIDIRTIFTGPSGAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENMNSIASLVM+VVVN+GDEE  + +S+  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVV H+T+PRF PFPLRYACEFLAQVFAI VNKELELENQ LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVSHNTTPRFAPFPLRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDL+KCDGA LLYK K +R+GM PSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGDA+CGMAAV+I+DKDWLFW+RSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFK FLEVVKTRS+PWKDYEMD IHSLQLILRNAFK+A++ + +T +IH K
Sbjct: 543  DGRKMHPRSSFKGFLEVVKTRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG VNGWNTK+A+LTGL VD AIG+
Sbjct: 603  LNDLKIDGMQELEAVTAEMVRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGK 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D V+ ML+LA+ G+EERNV+FEIKTHG   +S PISL+VNACAS+DV++
Sbjct: 663  HLLTLVEDSSVDTVNKMLELALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QKS+MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
             ++GW RDDVM+KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG ++EK+PFGFF+
Sbjct: 783  MLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R GKYVECLLCVSKRLD EG VTG+FCF           LHVQRLSE TA+KRLKVL+YI
Sbjct: 843  RYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGT+L +EQ N+L TS  CQRQL+KILDDTDLD IIEGYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQVMMKSNGK I I +D+
Sbjct: 963  EMLEFKLHEVLVASISQVMMKSNGKNIMISNDM 995


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score = 1597 bits (4135), Expect = 0.0
 Identities = 792/996 (79%), Positives = 887/996 (89%), Gaps = 8/996 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVE---QRPR 2799
            +S+  QSS+NSARS+HSARIIAQTSIDAKLHA             SVR T+V+   Q+PR
Sbjct: 3    TSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDHPV
Sbjct: 63   SDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FTSPSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGSMERLCDTM QEVFELTGYDRVMIY
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+VVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE L +DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+GD+E  A ES   +KRK
Sbjct: 303  DEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGL+VCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDL+KCDGA LL+K+K +R+G+TP+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGF GALALGDAICGMA+V+I+DKDWLFWFRSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEAESTDL--DTKAI 1194
            DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KEA++ D   +  AI
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANANAI 602

Query: 1193 HAKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNA 1014
            H+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKIA+LTGLTVD A
Sbjct: 603  HSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVDEA 662

Query: 1013 IGQHFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRD 834
            IG+HFL+LVEDSS   V  ML LA+ GKEE+NVQFEIKTHG+RSESGPISL+VNACASRD
Sbjct: 663  IGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACASRD 722

Query: 833  VKENVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNA 654
            V+E+VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTDEFGWCSEWN+
Sbjct: 723  VQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNS 782

Query: 653  AMTKVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFG 474
            AMT +SGW RD+VM+KMLLGEVFGT ++CCRLKNQEA+VNLG+ LNNA+TG  +EK  FG
Sbjct: 783  AMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTRFG 842

Query: 473  FFSRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVL 294
            FF+R+GKYVECLL VSKRLD EG VTG+FCF           LH Q+LSE TAMKRLKVL
Sbjct: 843  FFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLKVL 902

Query: 293  SYIRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGY 114
            +YIR++++NPLSGI+F+RKM+EGT L  +Q ++L TS  CQ+QL+K+LDDTDLD IIEGY
Sbjct: 903  AYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIEGY 962

Query: 113  LDLEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            LDLEMVEFKL EVL ASISQVM KSNGK + I++D+
Sbjct: 963  LDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDI 998


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1595 bits (4131), Expect = 0.0
 Identities = 786/993 (79%), Positives = 878/993 (88%), Gaps = 5/993 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+  QSST SARS+HSARIIAQT+IDAKLHA             SVR T+V   E++P+
Sbjct: 3    SSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPK 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SD+ TT YL+QIQKGK IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVG+ P 
Sbjct: 63   SDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPA 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT PSAAAL KALGFGEVSLLNP+LVHCKTSGKP+YAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ LPSGSMERLCDTM QEVFELTGYDRVM Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV  E+ KPGL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKVVQ
Sbjct: 243  KFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE LP DLTLCGSTLRAPH CHLQYMENM+SIASLVM+VVVN+GDEE  + +ST  +KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+R APLGIVSQSPN+MDLVKCDGA LLYK K +R+GMTPSDFQ+ DIVSWL EYH DST
Sbjct: 423  LMRVAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGFPGALALGD +CGMAAV+I+DK WLFW+RSHTAAE+RWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGRKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRNA K+A++ D +T  IH K
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTK 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            LNDL+I+G+QELEAVT+EMVRLIETASVPI AVDVDG +NGWNTKIA+LTGL VD AIG 
Sbjct: 603  LNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGN 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D VS ML+LA+ GKEERNV+FEIKTHG   +S PISL+VNACASRDV +
Sbjct: 663  HLLTLVEDSSVDTVSKMLELALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGD 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            +VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTD+FGWCSEWN+AMT
Sbjct: 723  SVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
            K++GW RDDV++KMLLGEVFGT  +CCRLKNQEA+VN G+ LNNA+TG +  K+ FGFF+
Sbjct: 783  KLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R+GKYVECLLCVSKRLD EG VTG+FCF           LH+QRLSE TA+KRLKVL+YI
Sbjct: 843  RNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYI 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            R++IRNPLSGIIF+RKM+EGTNL +EQ N+LRTS  CQRQLNKILDDTDLD II+GYLDL
Sbjct: 903  RRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            EM+EFKLHEVL+ASISQ+MMKSNGK I IV+D+
Sbjct: 963  EMLEFKLHEVLVASISQIMMKSNGKNIMIVNDM 995


>gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]
          Length = 1127

 Score = 1594 bits (4128), Expect = 0.0
 Identities = 791/996 (79%), Positives = 887/996 (89%), Gaps = 8/996 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVE---QRPR 2799
            +S+  QSS+NSARS+HSARIIAQTSIDAKLHA             SVR T+V+   Q+PR
Sbjct: 3    TSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDHPV
Sbjct: 63   SDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FTSPSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGSMERLCDTM QEVFELTGYDRVMIY
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+VVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE L +DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+GD+E  A ES   +KRK
Sbjct: 303  DEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGI+SQSPN+MDL+KCDGA LL+K+K +R+G+TP+DFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGILSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLQDIVSWLSEYHMDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGF GALALGDAICGMA+V+I+DKDWLFWFRSHTAAE+RWGGAKHEP EKD
Sbjct: 483  GLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKHEPDEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEAESTDL--DTKAI 1194
            DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KEA++ D   +  AI
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANANAI 602

Query: 1193 HAKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNA 1014
            H+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKIA+LTGLTVD A
Sbjct: 603  HSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVDEA 662

Query: 1013 IGQHFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRD 834
            IG+HFL+LVEDSS   V  ML LA+ GKEE+NVQFEIKTHG+RSESGPISL+VNACASRD
Sbjct: 663  IGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACASRD 722

Query: 833  VKENVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNA 654
            V+E+VVGVC IAQDIT QK++MDKFTRIEGDY+A           IFGTDEFGWCSEWN+
Sbjct: 723  VQESVVGVCLIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNS 782

Query: 653  AMTKVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFG 474
            AMT +SGW RD+VM+KMLLGEVFGT ++CCRLKNQEA+VNLG+ LNNA+TG  +EK  FG
Sbjct: 783  AMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTRFG 842

Query: 473  FFSRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVL 294
            FF+R+GKYVECLL VSKRLD EG VTG+FCF           LH Q+LSE TAMKRLKVL
Sbjct: 843  FFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAMKRLKVL 902

Query: 293  SYIRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGY 114
            +YIR++++NPLSGI+F+RKM+EGT L  +Q ++L TS  CQ+QL+K+LDDTDLD IIEGY
Sbjct: 903  AYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIEGY 962

Query: 113  LDLEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            LDLEMVEFKL EVL ASISQVM KSNGK + I++D+
Sbjct: 963  LDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDI 998


>gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]
          Length = 1127

 Score = 1592 bits (4122), Expect = 0.0
 Identities = 790/996 (79%), Positives = 885/996 (88%), Gaps = 8/996 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVE---QRPR 2799
            +S+  QSS+NSARS+HSARIIAQTSIDAKLHA             SVR T+V+   Q+PR
Sbjct: 3    TSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQK K IQPFGCLLALDEKTF+VIA+SENAPEMLTMVSHAVPSVGDHPV
Sbjct: 63   SDKVTTAYLHQIQKAKYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FTSPSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLI+DF
Sbjct: 123  LGIGTDIRTIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGSMERLCDTM QEVFELTGYDRVMIY
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HV+VVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEE--APESTHPEKRK 1905
            DE L +DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+GD+E  A ES   +KRK
Sbjct: 303  DEKLSIDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGL+VCH+T+PRFVPFPLRYACEFLAQVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLIVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDL+KCDGA LL+K+K +R+G+TP+DFQ+ DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLFKSKVHRLGITPTDFQLHDIVSWLSEYHMDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGF GALALGDAICGMA+V+I+DKDWLFWFRSHTAAE+RWGG KHEP EKD
Sbjct: 483  GLSTDSLYDAGFQGALALGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGEKHEPDEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEAESTDL--DTKAI 1194
            DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF KEA++ D   +  AI
Sbjct: 543  DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFGKEADTMDTKANANAI 602

Query: 1193 HAKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNA 1014
            H+KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKIA+LTGLTVD A
Sbjct: 603  HSKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVDEA 662

Query: 1013 IGQHFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRD 834
            IG+HFL+LVEDSS   V  ML LA+ GKEE+NVQFEIKTHG+RSESGPISL+VNACASRD
Sbjct: 663  IGKHFLTLVEDSSVHNVRKMLSLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACASRD 722

Query: 833  VKENVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNA 654
            V+E+VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTDEFGWCSEWN+
Sbjct: 723  VQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNS 782

Query: 653  AMTKVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFG 474
            AMT +SGW RD+VM+KMLLGEVFGT ++CCRLKNQEA+VNLG+ LNNA+TG  +EK  FG
Sbjct: 783  AMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAITGQVSEKTRFG 842

Query: 473  FFSRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVL 294
            FF+R+GKYVECLL VSKRLD EG VTG+FCF           L  Q+LSE TAMKRLKVL
Sbjct: 843  FFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALRFQKLSEQTAMKRLKVL 902

Query: 293  SYIRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGY 114
            +YIR++++NPLSGI+F+RKM+EGT L  +Q ++L TS  CQ+QL+K+LDDTDLD IIEGY
Sbjct: 903  AYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLDDTDLDCIIEGY 962

Query: 113  LDLEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            LDLEMVEFKL EVL ASISQVM KSNGK + I++D+
Sbjct: 963  LDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDI 998


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|731416116|ref|XP_010659783.1| PREDICTED: phytochrome
            A1 [Vitis vinifera] gi|147838424|emb|CAN76586.1|
            hypothetical protein VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1591 bits (4119), Expect = 0.0
 Identities = 786/991 (79%), Positives = 874/991 (88%), Gaps = 4/991 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV--EQRPRS 2796
            SS+  QSS+ S RS+HSARIIAQT++DAKLHA             SVR T    +Q+PRS
Sbjct: 3    SSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRS 62

Query: 2795 DKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVL 2616
            DK TT YLH IQKGK IQPFG LLALDEKTF+VIAYSENAPEMLTMVSHAVPSVG+HPVL
Sbjct: 63   DKVTTAYLHHIQKGKLIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVL 122

Query: 2615 GIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 2436
            GIG+D+RT+F+ PSA+ALHKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFE
Sbjct: 123  GIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFE 182

Query: 2435 PVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIYK 2256
            PVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERLCDTM QEVFELTGYDRVM YK
Sbjct: 183  PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYK 242

Query: 2255 FHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQD 2076
            FH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V+QD
Sbjct: 243  FHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQD 302

Query: 2075 ENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPEST--HPEKRKR 1902
            E LP DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+VVVN+GDEE   S    P+KRKR
Sbjct: 303  EKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKR 362

Query: 1901 LWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1722
            LWGLVVCHHT+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDML
Sbjct: 363  LWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDML 422

Query: 1721 LRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTG 1542
            +RDAPLGIVSQSPNVMDLVKCDGA LLYK K +R+G+TPSDFQ+ DI SWL EYH DSTG
Sbjct: 423  MRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTG 482

Query: 1541 LSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDD 1362
            LSTDSLYDAG+PGALALGDA+CGMAAVKIT KD LFWFRSHTAAE+RWGGAKHEPGEKDD
Sbjct: 483  LSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDD 542

Query: 1361 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKL 1182
            GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK++E+ D++T AIH KL
Sbjct: 543  GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKL 602

Query: 1181 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQH 1002
            NDL+IEG+QELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKI++LT L VD AIG H
Sbjct: 603  NDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMH 662

Query: 1001 FLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKEN 822
             L+LVEDSSAD V  ML LA+ G+EE+NVQFEIKTHG + +SGPISLVVNACASRD+ EN
Sbjct: 663  LLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHEN 722

Query: 821  VVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTK 642
            VVGVCF+AQDIT+QK++MDKFTRIEGDYKA           IFGTDEFGWCSEWN AM K
Sbjct: 723  VVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVK 782

Query: 641  VSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSR 462
            +SGW R++VM+KMLLGEVFGT  +CCRLKN+EA+V LGI LN+ +TG ++EK+ FGFFS+
Sbjct: 783  LSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSK 842

Query: 461  SGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIR 282
            SGKYVECLL VSK+LD EG VTGVFCF           LH+QRLSE TA+KRLK L+YI+
Sbjct: 843  SGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIK 902

Query: 281  KEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 102
            ++I+NPLSGIIF+RKMME T+L +EQ  +L TS  CQRQL+KILDD DLD IIEGYLDLE
Sbjct: 903  RQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLE 962

Query: 101  MVEFKLHEVLIASISQVMMKSNGKGITIVDD 9
            MVEF L EVL+ASISQVM+KSNGKGI IV+D
Sbjct: 963  MVEFTLREVLVASISQVMIKSNGKGIQIVND 993


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score = 1590 bits (4116), Expect = 0.0
 Identities = 785/991 (79%), Positives = 874/991 (88%), Gaps = 4/991 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV--EQRPRS 2796
            SS+  QSS+ S RS+HSARIIAQT++DAKLHA             SVR T    +Q+PRS
Sbjct: 3    SSRPTQSSSTSGRSKHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRS 62

Query: 2795 DKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVL 2616
            DK TT YLH IQKGK IQPFG LLALD+KTF+VIAYSENAPEMLTMVSHAVPSVG+HPVL
Sbjct: 63   DKVTTAYLHHIQKGKLIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVL 122

Query: 2615 GIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFE 2436
            GIG+D+RT+F+ PSA+ALHKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFE
Sbjct: 123  GIGTDVRTIFSGPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFE 182

Query: 2435 PVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIYK 2256
            PVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGS+ERLCDTM QEVFELTGYDRVM YK
Sbjct: 183  PVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYK 242

Query: 2255 FHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQD 2076
            FH+DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA H++V+QD
Sbjct: 243  FHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQD 302

Query: 2075 ENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPEST--HPEKRKR 1902
            E LP DLTLCGSTLRAPHSCH+QYMENMNSIASLVM+VVVN+GDEE   S    P+KRKR
Sbjct: 303  EKLPFDLTLCGSTLRAPHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKR 362

Query: 1901 LWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDML 1722
            LWGLVVCHHT+PRFVPFPLRYACEFLAQVFAIHVNKELELE+Q+LEKNILRTQTLLCDML
Sbjct: 363  LWGLVVCHHTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDML 422

Query: 1721 LRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTG 1542
            +RDAPLGIVSQSPNVMDLVKCDGA LLYK K +R+G+TPSDFQ+ DI SWL EYH DSTG
Sbjct: 423  MRDAPLGIVSQSPNVMDLVKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTG 482

Query: 1541 LSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDD 1362
            LSTDSLYDAG+PGALALGDA+CGMAAVKIT KD LFWFRSHTAAE+RWGGAKHEPGEKDD
Sbjct: 483  LSTDSLYDAGYPGALALGDAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDD 542

Query: 1361 GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKL 1182
            GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK++E+ D++T AIH KL
Sbjct: 543  GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKL 602

Query: 1181 NDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQH 1002
            NDL+IEG+QELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKI++LT L VD AIG H
Sbjct: 603  NDLKIEGMQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMH 662

Query: 1001 FLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKEN 822
             L+LVEDSSAD V  ML LA+ G+EE+NVQFEIKTHG + +SGPISLVVNACASRD+ EN
Sbjct: 663  LLTLVEDSSADTVKKMLHLALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLDEN 722

Query: 821  VVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTK 642
            VVGVCF+AQDIT+QK++MDKFTRIEGDYKA           IFGTDEFGWCSEWN AM K
Sbjct: 723  VVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVK 782

Query: 641  VSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSR 462
            +SGW R++VM+KMLLGEVFGT  +CCRLKN+EA+V LGI LN+ +TG ++EK+ FGFFS+
Sbjct: 783  LSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSK 842

Query: 461  SGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIR 282
            SGKYVECLL VSK+LD EG VTGVFCF           LH+QRLSE TA+KRLK L+YI+
Sbjct: 843  SGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIK 902

Query: 281  KEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLE 102
            ++I+NPLSGIIF+RKMME T+L +EQ  +L TS  CQRQL+KILDD DLD IIEGYLDLE
Sbjct: 903  RQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLE 962

Query: 101  MVEFKLHEVLIASISQVMMKSNGKGITIVDD 9
            MVEF L EVL+ASISQVM+KSNGKGI IV+D
Sbjct: 963  MVEFTLREVLVASISQVMIKSNGKGIQIVND 993


>emb|CDP17750.1| unnamed protein product [Coffea canephora]
          Length = 1131

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 782/991 (78%), Positives = 880/991 (88%), Gaps = 3/991 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV-EQRPRSD 2793
            +S+  QSST+SARS+HSARIIAQTSIDAKL+A             SVR T   E RP   
Sbjct: 3    ASRPSQSSTSSARSKHSARIIAQTSIDAKLNADFEESGSSFDYSSSVRVTPPGEHRP--- 59

Query: 2792 KATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLG 2613
              TT YLHQIQKGK IQPFGCLLALDEKTF+VIAYSENAPEMLTMVSHAVPSVGDHPV+ 
Sbjct: 60   -ITTAYLHQIQKGKFIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVID 118

Query: 2612 IGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEP 2433
            IG+DIRT+FT+PSAAAL+KALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEP
Sbjct: 119  IGTDIRTIFTNPSAAALYKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEP 178

Query: 2432 VKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIYKF 2253
            VKPHEVPMTAAGALQSYKLAAKAITRLQ+LPSGS++RLCDTM QEVFELTGYDRVM YKF
Sbjct: 179  VKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMTYKF 238

Query: 2252 HEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQDE 2073
            H+DDHGEV +EV KPGLEPY GLHYPATDIPQAARFLFMKNKVRMICDCRA HVKV+QDE
Sbjct: 239  HDDDHGEVLSEVTKPGLEPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDE 298

Query: 2072 NLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAPES--THPEKRKRL 1899
             LP DLTLCGSTLRAPH+CHLQYMENM SIASLVM+VV+N+GD+E   S    P+KRKRL
Sbjct: 299  KLPFDLTLCGSTLRAPHTCHLQYMENMTSIASLVMAVVINDGDDEGDSSDPADPQKRKRL 358

Query: 1898 WGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 1719
            WGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHV+KELELENQ++EKNIL+TQTLLCDMLL
Sbjct: 359  WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKELELENQIVEKNILKTQTLLCDMLL 418

Query: 1718 RDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTGL 1539
             DAPLGIVSQSPN+MDLVKCDGA L+YK K +RMG+TP+DFQ+RDI+SWL EYH DSTGL
Sbjct: 419  SDAPLGIVSQSPNIMDLVKCDGAVLMYKNKIHRMGLTPTDFQLRDIISWLSEYHMDSTGL 478

Query: 1538 STDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG 1359
            STDSL+DAGFPGALALGDA+CGMAAV+I+DKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG
Sbjct: 479  STDSLHDAGFPGALALGDAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG 538

Query: 1358 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKLN 1179
            RKMHPRSSFKAFLE VKTRSLPWKDYEMDAIHSLQLILRN+ KE E T  DT+ IH+KLN
Sbjct: 539  RKMHPRSSFKAFLEAVKTRSLPWKDYEMDAIHSLQLILRNSSKEDEGTKSDTQDIHSKLN 598

Query: 1178 DLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQHF 999
            DL+I+G+QELEAVTSEMVRLIETASVPILAVD+DG+VNGWNTKI+DLTGL VD AIG+  
Sbjct: 599  DLRIDGLQELEAVTSEMVRLIETASVPILAVDIDGVVNGWNTKISDLTGLDVDEAIGRKL 658

Query: 998  LSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKENV 819
            L+LVEDSSA+ V+ ML+LA+ GKEE+NVQFEIKTHG ++++GP+SL+VNACASRDV+  V
Sbjct: 659  LTLVEDSSAETVNKMLELALLGKEEQNVQFEIKTHGSKADAGPVSLIVNACASRDVRGTV 718

Query: 818  VGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTKV 639
            VGVCF+AQDIT QK++MDKFTRIEGDY+A           IFGTDEFGWCSEWN+AMTKV
Sbjct: 719  VGVCFVAQDITGQKAIMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCSEWNSAMTKV 778

Query: 638  SGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSRS 459
            SGW R++VM+KMLLGEVFG   +CCRL+NQEA+VNLGI LN A++G  +EK+PFGFF+R+
Sbjct: 779  SGWRREEVMDKMLLGEVFGIHTACCRLRNQEAFVNLGILLNIAISGQASEKIPFGFFARN 838

Query: 458  GKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIRK 279
            GKY+ECLLCVSK+LD EG VTGVFCF           LH+QRLSE TA+KRLKVL+YIR 
Sbjct: 839  GKYIECLLCVSKKLDREGAVTGVFCFLQLASYELQQALHIQRLSEETALKRLKVLAYIRM 898

Query: 278  EIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLEM 99
            +IRNPLSGIIF+RKM+E T L ++Q NLL+TS  CQRQLNKILDDTDLD II+GYLDLEM
Sbjct: 899  QIRNPLSGIIFSRKMLEDTELGEDQKNLLQTSAQCQRQLNKILDDTDLDSIIDGYLDLEM 958

Query: 98   VEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            VEFKLHEVL+ASISQVM+KS+ KG+ IV++L
Sbjct: 959  VEFKLHEVLVASISQVMIKSSAKGVKIVNNL 989


>ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906|gb|EOY11803.1|
            Phytochrome A [Theobroma cacao]
          Length = 1121

 Score = 1582 bits (4097), Expect = 0.0
 Identities = 778/990 (78%), Positives = 876/990 (88%), Gaps = 3/990 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVEQRPRSDK 2790
            SS+   SS+NS RSRHSARIIAQT++DAKLHA             SVR +  +Q+PRSD+
Sbjct: 3    SSRPSHSSSNSGRSRHSARIIAQTTVDAKLHANFEESGSSFDYSSSVRVSG-DQQPRSDR 61

Query: 2789 ATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGI 2610
             TT YLHQIQKGK IQPFGCLLALDEKT++VIAYSENAPEMLTMVSHAVPSVGDHPVLGI
Sbjct: 62   VTTAYLHQIQKGKFIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGI 121

Query: 2609 GSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPV 2430
            G+DI+T+FT+PS++AL KALG GEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDFEPV
Sbjct: 122  GTDIKTIFTAPSSSALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPV 181

Query: 2429 KPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIYKFH 2250
            KP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDRVM YKFH
Sbjct: 182  KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 241

Query: 2249 EDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQDEN 2070
            +DDHGEV +E+ KPGLEPY GLHYPATDIPQAARFLFMKNKVRMI DC A HVKV QD+ 
Sbjct: 242  DDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVFQDDK 301

Query: 2069 LPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEA--PESTHPE-KRKRL 1899
            LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+V+VN+GDEE   P+S  P+ KRKRL
Sbjct: 302  LPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQKRKRL 361

Query: 1898 WGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDMLL 1719
            WGLVVCH+T+PRFVPFPLRYACEFLAQVFAIHVNKE+ELENQ++EKNILRTQTLLCDMLL
Sbjct: 362  WGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELENQIIEKNILRTQTLLCDMLL 421

Query: 1718 RDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDSTGL 1539
            RDAP+GI+SQSPN+MDLVKCDGA LLYK K +++G+TPSDFQ+ +I SWL EYH DSTGL
Sbjct: 422  RDAPMGIISQSPNIMDLVKCDGAALLYKNKIWKLGVTPSDFQLHEIASWLSEYHMDSTGL 481

Query: 1538 STDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKDDG 1359
            STDSLYDAGFPGALALGD +CGMAAV+IT KD LFWFRSHTAAEIRWGGAKHEPGEKD+G
Sbjct: 482  STDSLYDAGFPGALALGDVVCGMAAVRITLKDMLFWFRSHTAAEIRWGGAKHEPGEKDNG 541

Query: 1358 RKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAKLN 1179
            RKMHPRSSFKAFL+VVKTRS+PWKDYEMDAIHSLQLILRNAFK+ E+TD +T AIH+KL+
Sbjct: 542  RKMHPRSSFKAFLQVVKTRSMPWKDYEMDAIHSLQLILRNAFKDVETTDTNTSAIHSKLS 601

Query: 1178 DLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQHF 999
            DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWN KIA+LTGL VD AIG+H 
Sbjct: 602  DLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNMKIAELTGLPVDKAIGKHL 661

Query: 998  LSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKENV 819
            L+LVEDSS + V  ML LA+ GKEE+N+QFEIKTHG R E+GPISLVVNACA+RD+ ENV
Sbjct: 662  LTLVEDSSVETVKQMLVLALQGKEEKNIQFEIKTHGSRIEAGPISLVVNACANRDLHENV 721

Query: 818  VGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMTKV 639
            VGVCF+AQDIT QK +MDKFTRIEGDYKA           IFG DEFGWCSEWN AMTK+
Sbjct: 722  VGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGMDEFGWCSEWNPAMTKL 781

Query: 638  SGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFSRS 459
            +GW RD+V++KMLLGEVFGT  +CCRLK+Q+++VNLG+ LNNA+TGH+ EK+PFGFF+RS
Sbjct: 782  TGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGVVLNNAMTGHEPEKVPFGFFARS 841

Query: 458  GKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYIRK 279
            GKYVECLLCV+K+LD E  VTGVFCF           LHVQRLSE TAMKRLK L+Y+++
Sbjct: 842  GKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLSEQTAMKRLKALAYLKR 901

Query: 278  EIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDLEM 99
            +IRNPLSGIIF+RKMMEGT L  EQ  LL+TS  CQRQL+KILDD+DLD II+GYLDLEM
Sbjct: 902  QIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILDDSDLDSIIDGYLDLEM 961

Query: 98   VEFKLHEVLIASISQVMMKSNGKGITIVDD 9
            ++F LHEVL+ASISQVMMKSNGKGI IV+D
Sbjct: 962  IDFTLHEVLVASISQVMMKSNGKGIRIVND 991


>ref|XP_012839835.1| PREDICTED: phytochrome A-like [Erythranthe guttatus]
            gi|848878850|ref|XP_012839836.1| PREDICTED: phytochrome
            A-like [Erythranthe guttatus] gi|604330314|gb|EYU35379.1|
            hypothetical protein MIMGU_mgv1a000476mg [Erythranthe
            guttata]
          Length = 1129

 Score = 1579 bits (4089), Expect = 0.0
 Identities = 798/1003 (79%), Positives = 879/1003 (87%), Gaps = 15/1003 (1%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXS-VRATNVEQR---- 2805
            S+Q GQSST SARSRHSAR+IAQTSIDAKLHA             + VR TN   R    
Sbjct: 3    SAQPGQSSTTSARSRHSARMIAQTSIDAKLHADFEESGGTSFDYSASVRVTNDPIRGGDH 62

Query: 2804 -PRSDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGD 2628
             P S K TT YLHQIQKGK IQPFGCLLALDEKTF+VIAYSENAPEMLT V+HAVP VGD
Sbjct: 63   PPSSSKVTTAYLHQIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTTVTHAVPIVGD 122

Query: 2627 HPVLGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLI 2448
            HP L IGSDIR++FT+PS++AL KALGFGEVSLLNP+LVHCKTSGKPFYAI+HRVTG LI
Sbjct: 123  HPFLDIGSDIRSIFTAPSSSALQKALGFGEVSLLNPVLVHCKTSGKPFYAIIHRVTGGLI 182

Query: 2447 IDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRV 2268
            IDFEPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGS+ERLCD MAQEVFELTGYDRV
Sbjct: 183  IDFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSVERLCDAMAQEVFELTGYDRV 242

Query: 2267 MIYKFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVK 2088
            M+YKFHEDDHGEV  E+ K GL+PY GLHYPATDIPQAARFLFMKNKVRMICDCRANHVK
Sbjct: 243  MVYKFHEDDHGEVLAEITKTGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRANHVK 302

Query: 2087 VVQDENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEA-----PEST 1923
            VVQD+NL  DLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEG+EE        S+
Sbjct: 303  VVQDKNLDFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGEEEEAGPANSSSS 362

Query: 1922 HPEKRKRLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQ 1743
            + EKRKRLWGLVVCH+TSPRFVPFPLRYACEFLAQVFAIHV+KELELENQ LEKNILRTQ
Sbjct: 363  NLEKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVSKELELENQNLEKNILRTQ 422

Query: 1742 TLLCDMLLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDE 1563
            TLLCD+LLRDAPLGIVSQSPNV DLVKCDGA LLYK K Y++G+TP+DFQIRDIVSWLDE
Sbjct: 423  TLLCDLLLRDAPLGIVSQSPNVTDLVKCDGAVLLYKNKTYKLGLTPNDFQIRDIVSWLDE 482

Query: 1562 YHRDSTGLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKH 1383
            YHRDSTGLSTDSLYDAGFPGAL+LGDAICG AAV+IT++DWLFWFR+HTAAEIRWGGAKH
Sbjct: 483  YHRDSTGLSTDSLYDAGFPGALSLGDAICGTAAVRITERDWLFWFRAHTAAEIRWGGAKH 542

Query: 1382 EPGEKDDGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEAESTDLD 1206
            E GEKDDGRKMHPRSSF AFLEVVK+RSLPWKD+EMDAIHSLQLILRN+F KE    DL 
Sbjct: 543  EAGEKDDGRKMHPRSSFNAFLEVVKSRSLPWKDFEMDAIHSLQLILRNSFLKEGGEGDL- 601

Query: 1205 TKAIHAKLNDLQ-IEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGL 1029
               +  +L+++Q IEG+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWN+KIA+LTGL
Sbjct: 602  ---VRTRLSEMQMIEGVQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNSKIAELTGL 658

Query: 1028 TVDNAIGQHFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESG-PISLVVN 852
             V++AIG+HFL LVEDSSA  VS ML+LA+ GKEE+NVQFEIKTH + +ES  PI+LVVN
Sbjct: 659  GVESAIGRHFLELVEDSSAGVVSRMLELAIQGKEEQNVQFEIKTHDQTTESAPPITLVVN 718

Query: 851  ACASRDVKENVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGW 672
            ACAS+DVKEN+VGVCFIAQDITAQK++MDKFTRI+GDYK+           IFG+DEFGW
Sbjct: 719  ACASKDVKENIVGVCFIAQDITAQKTIMDKFTRIQGDYKSIIQNPNPLIPPIFGSDEFGW 778

Query: 671  CSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTIRS-CCRLKNQEAYVNLGIALNNAVTGHD 495
            CSEWN AMTK+SGW +DDV+NKML+GE+FGT +S  CR+KNQEAYVNLGIALNNAVTG  
Sbjct: 779  CSEWNPAMTKISGWRKDDVINKMLVGEIFGTNKSNYCRIKNQEAYVNLGIALNNAVTGQH 838

Query: 494  NEKLPFGFFSRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTA 315
            +EK+PFGF SR GKYVECLLCVSK++D EG+VTGVFCF           LHVQRLSE  A
Sbjct: 839  SEKMPFGFLSRGGKYVECLLCVSKKMDPEGSVTGVFCFLQLASPELQRALHVQRLSEENA 898

Query: 314  MKRLKVLSYIRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDL 135
            +KR +VL+YIR+EIRNPLSGIIF+RKMMEGT+LDDEQ NLLRTS HCQRQLNKILDDTDL
Sbjct: 899  LKRSRVLAYIRREIRNPLSGIIFSRKMMEGTDLDDEQKNLLRTSGHCQRQLNKILDDTDL 958

Query: 134  DHIIEGYLDLEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            DHIIEGYLDLEMVEF LHEVLIASISQVMMKSNGKGI I D+L
Sbjct: 959  DHIIEGYLDLEMVEFNLHEVLIASISQVMMKSNGKGIVIADNL 1001


>gb|AJA72481.1| phytochrome A [Ipomoea purpurea]
          Length = 1127

 Score = 1572 bits (4070), Expect = 0.0
 Identities = 778/996 (78%), Positives = 879/996 (88%), Gaps = 8/996 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNVE---QRPR 2799
            +S+  QSS+NSARS+HSARIIAQTSIDAKLHA             SVR T+V+   Q+PR
Sbjct: 3    TSRPSQSSSNSARSKHSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TT YLHQIQK K IQPFGCLLALDEKTF+VIA+SENA EMLTMVSHAVPSVGDHP 
Sbjct: 63   SDKVTTAYLHQIQKAKFIQPFGCLLALDEKTFKVIAFSENASEMLTMVSHAVPSVGDHPA 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIR++FTSPSAAAL KALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLIIDF
Sbjct: 123  LGIGTDIRSIFTSPSAAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAI RLQ+LPSGSMERLCDTM QEVFELTGYDRVMIY
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +E+ KPGLEPY GLHYPATDIPQA+RFLFMKNKVRMICDCRA HV+VVQ
Sbjct: 243  KFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQASRFLFMKNKVRMICDCRAKHVRVVQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEAP--ESTHPEKRK 1905
            DE L +DLTLCGSTLRAPH+CHLQYMENMNSIASLVM++VVN+GDEE    ES   +KRK
Sbjct: 303  DEKLSIDLTLCGSTLRAPHTCHLQYMENMNSIASLVMAIVVNDGDEEGETSESGRIQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+T+PRFVPFPLRYACEFL+QVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIVSQSPN+MDL+KCDGA LLYK K +R+G+TP+DFQ++DIVSWL EYH DST
Sbjct: 423  LMRDAPLGIVSQSPNIMDLIKCDGAALLYKNKVHRLGITPTDFQLQDIVSWLSEYHMDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAGF GAL+LGDAICGMA+V+I+DKDWLFWFRSHTAAE+RWGGAK EP +KD
Sbjct: 483  GLSTDSLYDAGFQGALSLGDAICGMASVRISDKDWLFWFRSHTAAEVRWGGAKQEPDKKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAF-KEAES--TDLDTKAI 1194
            D RKMHPRSSFKAFLEVVKTRS+PWKDYEMDAIHSLQLILRN+F KEA++  T+ +  AI
Sbjct: 543  DSRKMHPRSSFKAFLEVVKTRSIPWKDYEMDAIHSLQLILRNSFGKEADTMVTNANANAI 602

Query: 1193 HAKLNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNA 1014
            H KLNDL+I+G+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKIA+LTGLTVD A
Sbjct: 603  HTKLNDLRIDGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLTVDEA 662

Query: 1013 IGQHFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRD 834
            IG+HFL+ VEDSS   V  ML LA+ GKEE+NVQFEIKTHG+RSESGPISL+VNACASRD
Sbjct: 663  IGKHFLTFVEDSSVHTVKKMLNLALQGKEEKNVQFEIKTHGQRSESGPISLIVNACASRD 722

Query: 833  VKENVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNA 654
            V+E+VVGVCFIAQDIT QK++MDKFTRIEGDY+A           IFGTDEFGWCSEWN+
Sbjct: 723  VQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGTDEFGWCSEWNS 782

Query: 653  AMTKVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFG 474
            AMT +SGW RD+V++KMLLGEVFGT ++CCRLKNQEA+V LG+ LNNA+TG  +EK  FG
Sbjct: 783  AMTNLSGWRRDEVIDKMLLGEVFGTQKACCRLKNQEAFVKLGVVLNNAITGQMSEKTRFG 842

Query: 473  FFSRSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVL 294
            FF+R+GKYVECLL VSKRLD EG VTG+FCF           LH Q+LSE TA+KRLKVL
Sbjct: 843  FFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLSEQTAVKRLKVL 902

Query: 293  SYIRKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGY 114
            +YIR++++NPLSGI+F+RKM+EGT L  +Q  +LR S  CQ+QL+K+LDDTDLD IIEGY
Sbjct: 903  AYIRRQVKNPLSGIMFSRKMLEGTELGKDQKTILRASAQCQQQLSKVLDDTDLDCIIEGY 962

Query: 113  LDLEMVEFKLHEVLIASISQVMMKSNGKGITIVDDL 6
            LDLEMVEFKL EVL ASISQVM KSNGK + I++D+
Sbjct: 963  LDLEMVEFKLDEVLHASISQVMTKSNGKSLRIINDI 998


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score = 1568 bits (4059), Expect = 0.0
 Identities = 773/992 (77%), Positives = 866/992 (87%), Gaps = 5/992 (0%)
 Frame = -1

Query: 2969 SSQRGQSSTNSARSRHSARIIAQTSIDAKLHAXXXXXXXXXXXXXSVRATNV---EQRPR 2799
            SS+   SS+NSARSRHSARIIAQT++DAKLHA             SVR T+    +Q PR
Sbjct: 3    SSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPR 62

Query: 2798 SDKATTTYLHQIQKGKQIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDHPV 2619
            SDK TTTYLH IQKGK IQPFGCLLALDEKTF+V+AYSENAPE+LTMVSHAVPSVG+HPV
Sbjct: 63   SDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPV 122

Query: 2618 LGIGSDIRTVFTSPSAAALHKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 2439
            LGIG+DIRT+FT+PSA+AL KA+GFG+VSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF
Sbjct: 123  LGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDF 182

Query: 2438 EPVKPHEVPMTAAGALQSYKLAAKAITRLQTLPSGSMERLCDTMAQEVFELTGYDRVMIY 2259
            EPVKP+EVPMTAAGALQSYKLAAKAITRLQ+LPSGSMERLCDTM QEVFELTGYDR M Y
Sbjct: 183  EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAY 242

Query: 2258 KFHEDDHGEVFTEVRKPGLEPYAGLHYPATDIPQAARFLFMKNKVRMICDCRANHVKVVQ 2079
            KFH+DDHGEV +EV KPG+EPY GLHYPATDIPQA+RFLFMKNKVRMI DC A HVKV+Q
Sbjct: 243  KFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQ 302

Query: 2078 DENLPLDLTLCGSTLRAPHSCHLQYMENMNSIASLVMSVVVNEGDEEA--PESTHPEKRK 1905
            DE LP DLTLCGSTLRAPHSCHLQYMENMNSIASLVM+VVVN+GDE+   P+S +P+KRK
Sbjct: 303  DEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRK 362

Query: 1904 RLWGLVVCHHTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQMLEKNILRTQTLLCDM 1725
            RLWGLVVCH+TSPRFVPFPLRYACEFLAQVFAIHVNKELELENQ++EKNILRTQTLLCDM
Sbjct: 363  RLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDM 422

Query: 1724 LLRDAPLGIVSQSPNVMDLVKCDGATLLYKTKKYRMGMTPSDFQIRDIVSWLDEYHRDST 1545
            L+RDAPLGIV+QSPN+MDLVKCDGA L Y+ K +R+G+TPSD Q++DI  WL EYH DST
Sbjct: 423  LMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDST 482

Query: 1544 GLSTDSLYDAGFPGALALGDAICGMAAVKITDKDWLFWFRSHTAAEIRWGGAKHEPGEKD 1365
            GLSTDSLYDAG+PGALALGD +CGMAAV+IT KD LFWFRS TAAEIRWGGAKHEPGEKD
Sbjct: 483  GLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKD 542

Query: 1364 DGRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKEAESTDLDTKAIHAK 1185
            DGR+MHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK+ E+ D+DTK IHA+
Sbjct: 543  DGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDIETMDVDTKTIHAR 602

Query: 1184 LNDLQIEGIQELEAVTSEMVRLIETASVPILAVDVDGLVNGWNTKIADLTGLTVDNAIGQ 1005
            L+DL+IEG+QELEAVTSEMVRLIETA+VPILAVDVDGLVNGWNTKI++LTGL VD AIG+
Sbjct: 603  LSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGK 662

Query: 1004 HFLSLVEDSSADAVSTMLKLAVSGKEERNVQFEIKTHGERSESGPISLVVNACASRDVKE 825
            H L+LVEDSS D V  ML LA+ GKEE+N+QFEIKTHG +SE GPI LVVNACASRD+ E
Sbjct: 663  HLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHE 722

Query: 824  NVVGVCFIAQDITAQKSMMDKFTRIEGDYKAXXXXXXXXXXXIFGTDEFGWCSEWNAAMT 645
            NVVGVCF+ QDIT QK +MDKFTRIEGDYKA           IFGTDEFGWCSEWN AMT
Sbjct: 723  NVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMT 782

Query: 644  KVSGWTRDDVMNKMLLGEVFGTIRSCCRLKNQEAYVNLGIALNNAVTGHDNEKLPFGFFS 465
             ++GW R++V++KMLLGEVFG   +CCRLKNQEA+VNLG+ LN A+TG ++EK+ FGFF+
Sbjct: 783  NLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFA 842

Query: 464  RSGKYVECLLCVSKRLDTEGTVTGVFCFXXXXXXXXXXXLHVQRLSEHTAMKRLKVLSYI 285
            R+GKYVECLLCVSK+LD EG VTGVFCF           LHVQRLSE TA+KRLK L+Y+
Sbjct: 843  RTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYL 902

Query: 284  RKEIRNPLSGIIFTRKMMEGTNLDDEQNNLLRTSLHCQRQLNKILDDTDLDHIIEGYLDL 105
            +++I NPLSGIIF+ KMMEGT L  EQ  LL TS  CQ QL+KILDD+DLD IIEGYLDL
Sbjct: 903  KRQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDL 962

Query: 104  EMVEFKLHEVLIASISQVMMKSNGKGITIVDD 9
            EMVEF L EVL+A+ SQVMMKSN KGI I++D
Sbjct: 963  EMVEFTLREVLVAATSQVMMKSNEKGIRIIND 994