BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00002279
         (2574 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II tra...  1059   0.0  
ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II tra...   967   0.0  
ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II tra...   919   0.0  
emb|CDP00585.1| unnamed protein product [Coffea canephora]            911   0.0  
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   887   0.0  
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...   886   0.0  
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   871   0.0  
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              864   0.0  
ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II tra...   863   0.0  
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   862   0.0  
ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   860   0.0  
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   859   0.0  
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   858   0.0  
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   857   0.0  
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   856   0.0  
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...   856   0.0  
ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II tra...   856   0.0  
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   856   0.0  
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   854   0.0  
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   853   0.0  

>ref|XP_011077190.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Sesamum indicum]
          Length = 806

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 554/691 (80%), Positives = 579/691 (83%), Gaps = 3/691 (0%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            MV KQLIVAVEGTAA+GPFWQ IVSDYLDKIIRCFCGNES GQKPST QVELSLV+FNAH
Sbjct: 1    MVPKQLIVAVEGTAAVGPFWQTIVSDYLDKIIRCFCGNESTGQKPSTSQVELSLVMFNAH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQT 2073
            G Y ACLVQRSGWTRDMD+ F WLSAIPF+GGGFNDAAIAEGLAEALMMFSS NG+Q Q 
Sbjct: 61   GSYCACLVQRSGWTRDMDIFFQWLSAIPFAGGGFNDAAIAEGLAEALMMFSSPNGSQIQN 120

Query: 2072 MDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCAIS 1893
            MD QRHCILVAASNPYPLPTPVYRPQPQ++EQS+NI++  DNRLSDAEALAKSF Q  IS
Sbjct: 121  MDGQRHCILVAASNPYPLPTPVYRPQPQNLEQSDNIESQPDNRLSDAEALAKSFAQFGIS 180

Query: 1892 LSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSGML 1713
            LSIICPK LPKL+AIYNAGK N RAAD   VDNVKNPHFLVLIS+NFME  AALSR GM 
Sbjct: 181  LSIICPKKLPKLRAIYNAGKRNARAADP-PVDNVKNPHFLVLISENFMEGLAALSRPGMA 239

Query: 1712 NLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEPTT 1533
            NL SNQNP+KMDVTPA P   I+GPP AS  SANGSV+ RQPI VGKNIPPATVKVEP T
Sbjct: 240  NLPSNQNPIKMDVTPAPP---ISGPPPASGASANGSVLGRQPIPVGKNIPPATVKVEPIT 296

Query: 1532 VPSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPPLR 1353
            V S TGPAFP I SV RA SQ V SLQTSSPISTSQEM  +NEN  DMKP V +MTP LR
Sbjct: 297  VTSGTGPAFPPISSVSRATSQPVPSLQTSSPISTSQEMVSSNENVHDMKPQVTSMTPSLR 356

Query: 1352 PAGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTXXXXX 1173
            P GA ANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQT     
Sbjct: 357  PVGAPANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTVISSG 416

Query: 1172 XXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSMGQTL 993
                     SLPIPA+GQV              TVTG SSLGMSQ LSNLQVSGS+GQ+L
Sbjct: 417  SSGVASIAGSLPIPASGQVAQNSSSASFTSTAPTVTGTSSLGMSQSLSNLQVSGSLGQSL 476

Query: 992  TGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQPVGVN 822
             GMSQGNLP TQMV TG     NMMSG GTTGMPSG+G MMPTPGMSQ + PGMQPVGVN
Sbjct: 477  PGMSQGNLPVTQMVQTGMSMNQNMMSGTGTTGMPSGSGNMMPTPGMSQQIPPGMQPVGVN 536

Query: 821  GNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSSASET 642
             N+SV N  MP+N           SKYVKVWEGNLSGQRQGQPVFITRLEGYRN+SASET
Sbjct: 537  SNNSVTN--MPLNQQTSSTIQPAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRNASASET 594

Query: 641  LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQ 462
            LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQ
Sbjct: 595  LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQ 654

Query: 461  TLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            TLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN
Sbjct: 655  TLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 685


>ref|XP_011070829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Sesamum indicum]
          Length = 788

 Score =  967 bits (2499), Expect = 0.0
 Identities = 513/692 (74%), Positives = 559/692 (80%), Gaps = 4/692 (0%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQL+VAVEGTAAIGPFWQ IVSDYLDKIIRCF GNE  GQK S   VELSLV+FNAH
Sbjct: 1    MSPKQLVVAVEGTAAIGPFWQTIVSDYLDKIIRCFFGNEPTGQKSSMTPVELSLVMFNAH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQT 2073
            G YSACLVQRSGWTRDMD+ F WL AIPF+GGGFNDAAIAEGLAEALMMFSS++GNQNQ 
Sbjct: 61   GSYSACLVQRSGWTRDMDIFFQWLQAIPFAGGGFNDAAIAEGLAEALMMFSSTSGNQNQI 120

Query: 2072 MDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCAIS 1893
            ++ QRHCILVAASNPYPLPTPVYRPQPQ+ E+S++++T  DN LSDAE LAKSF Q AIS
Sbjct: 121  VEGQRHCILVAASNPYPLPTPVYRPQPQNPEKSDSMETQPDNCLSDAETLAKSFAQFAIS 180

Query: 1892 LSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSGML 1713
            LS+ICPK LPKL+ IYNAGK NPRAA+   VDNVKNPHFLVLIS+NF+EAR++LSRSGM 
Sbjct: 181  LSVICPKQLPKLRGIYNAGKRNPRAAEP-PVDNVKNPHFLVLISENFVEARSSLSRSGMT 239

Query: 1712 NLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEPTT 1533
            +L SNQNPVK DV   AP L I+G P AS PSAN SV+ RQ ISVG NI PATVKVEP T
Sbjct: 240  SLPSNQNPVKTDV---APVLPISGLPSASAPSANASVLVRQQISVG-NIAPATVKVEPIT 295

Query: 1532 VPSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPPLR 1353
            + S T PAFP I SVPRAASQAV SLQTSSPISTSQ+M PNN N  D+KP V NM P LR
Sbjct: 296  LTSMTAPAFPQIASVPRAASQAVPSLQTSSPISTSQDMIPNNANVPDVKPSVTNMAPSLR 355

Query: 1352 PAGAAANVRILNDVAQARQALAGGTS-IGLPSMGGTPMLSNMISSGMASSVPPAQTXXXX 1176
            P GA ANVRILNDVAQARQALAGGTS IGLPS+GGTPMLSNMISSG+ +S+PPAQT    
Sbjct: 356  PVGAPANVRILNDVAQARQALAGGTSTIGLPSIGGTPMLSNMISSGITTSIPPAQTVISS 415

Query: 1175 XXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSMGQT 996
                      SLP+ ATGQV             S V+GN+SL MSQP S LQ S S+ QT
Sbjct: 416  GPSGVTSIAGSLPVSATGQVVHNSTPASLISTASNVSGNASLTMSQPSSTLQGSVSLSQT 475

Query: 995  LTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQPVGV 825
            L GMSQGN P TQ+V TG     NMMSG G +GMPSG GTM+PT G SQ  QPGMQPVG+
Sbjct: 476  LPGMSQGNHPVTQIVQTGMNMNQNMMSGSGASGMPSGTGTMIPTLGTSQQGQPGMQPVGL 535

Query: 824  NGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSSASE 645
            N N+S  N  MP+N           SKY+KVWEGNLSGQRQGQPVFITRLEGYR++SASE
Sbjct: 536  NSNNSGTN--MPLNQQTSSTVQSAQSKYIKVWEGNLSGQRQGQPVFITRLEGYRSASASE 593

Query: 644  TLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPS 465
            TLAANWPP MQIVRLISQDHMNNK YVGKADFLVFRAM+QHGFLGQLQEKKLCAVIQLPS
Sbjct: 594  TLAANWPPIMQIVRLISQDHMNNKHYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPS 653

Query: 464  QTLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            QTLLLSVSDKA+RLIGMLFPGDMVVFKPQIPN
Sbjct: 654  QTLLLSVSDKAHRLIGMLFPGDMVVFKPQIPN 685


>ref|XP_009771929.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Nicotiana sylvestris]
          Length = 828

 Score =  919 bits (2374), Expect = 0.0
 Identities = 492/695 (70%), Positives = 555/695 (79%), Gaps = 7/695 (1%)
 Frame = -2

Query: 2432 MVA-KQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNA 2256
            MVA KQLIVAVEGTAA+GPFW  IVSDYLDKIIR F G ES  QKPS   VE+SLV+FNA
Sbjct: 1    MVADKQLIVAVEGTAALGPFWHTIVSDYLDKIIRSFFGAESTSQKPSAANVEVSLVMFNA 60

Query: 2255 HGPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQ 2076
            HG YSACLVQRSGWTRDMD+ F WLSAIPFSGGGF+DAA+AEGL EALMMFSS NGNQ+Q
Sbjct: 61   HGSYSACLVQRSGWTRDMDIFFQWLSAIPFSGGGFSDAAVAEGLGEALMMFSSPNGNQSQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              M+ ++HC+L++ASNPYPLPTPVYRPQ Q +EQ+EN +T TD+RLSDAE +AK+F QC+
Sbjct: 121  QNMEGKKHCLLISASNPYPLPTPVYRPQMQKLEQNENTETQTDSRLSDAETVAKAFPQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK L KL+A+YNAGK NPRAAD   +D  KNP+FLVLIS+NF+EARAA SRSG
Sbjct: 181  VSLSVICPKQLSKLRAVYNAGKRNPRAADP-PIDTAKNPNFLVLISENFIEARAAFSRSG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            M NL SNQ P+KMDV P+ P +S+  PP  S  +ANGSVMSRQPIS G NIPPATVK+EP
Sbjct: 240  MTNLTSNQTPIKMDV-PSIPPVSV--PPSISNSAANGSVMSRQPISAG-NIPPATVKIEP 295

Query: 1538 TTVPSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPP 1359
            TTV S  GPAF HIPSV R A Q V SLQTSSP+S SQEM  +NEN Q+MKP+V+ MT  
Sbjct: 296  TTVTSMNGPAFSHIPSV-RPALQPVPSLQTSSPLSVSQEMASHNENVQEMKPIVSGMTQS 354

Query: 1358 LRP-AGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTXX 1182
            LRP A AAANVRILNDVAQARQA+AG TSIGL SMGGTPMLS+MISSGMASSVP AQT  
Sbjct: 355  LRPVAAAAANVRILNDVAQARQAIAGATSIGLQSMGGTPMLSSMISSGMASSVPSAQTVF 414

Query: 1181 XXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSM- 1005
                        S+P+  +GQ               +++GN ++ +SQPLSN Q   SM 
Sbjct: 415  SSGQSGVTTVSGSVPLSGSGQNTQNSAPASFTSTAPSMSGNPNISISQPLSNNQGGISMA 474

Query: 1004 GQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQP 834
            GQT+ GM QGNLP TQM+P+GTG   NM++G G TGMPSG GTMMPTPG+SQ  QPGMQP
Sbjct: 475  GQTVPGMCQGNLPGTQMMPSGTGMNQNMLTGLGATGMPSGTGTMMPTPGISQQGQPGMQP 534

Query: 833  VGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSS 654
            VG   NS+ ANM +               KYVKVWEGNLSGQRQGQPVFITRLEGYR++S
Sbjct: 535  VG---NSTGANMPLSQQQTPAALPSAQS-KYVKVWEGNLSGQRQGQPVFITRLEGYRSAS 590

Query: 653  ASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQ 474
            ASE+LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL QLQEKKLCAVIQ
Sbjct: 591  ASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQ 650

Query: 473  LPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            LPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQIP+
Sbjct: 651  LPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 685


>emb|CDP00585.1| unnamed protein product [Coffea canephora]
          Length = 835

 Score =  911 bits (2355), Expect = 0.0
 Identities = 483/691 (69%), Positives = 544/691 (78%), Gaps = 6/691 (0%)
 Frame = -2

Query: 2423 KQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAHGPY 2244
            + LIVAVEGTAA+GPFW  ++SDYL+K+IR FC N+S GQK S   V LSLV FN+HGPY
Sbjct: 12   RHLIVAVEGTAAVGPFWHTVLSDYLEKVIRSFCANDSTGQKLSAANVNLSLVTFNSHGPY 71

Query: 2243 SACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQ-TMD 2067
            SACLVQRSGWTRD+D+ F WLSAIPF GGGFNDAAIAEGLAEALMM SS NGNQ Q  +D
Sbjct: 72   SACLVQRSGWTRDIDVFFEWLSAIPFGGGGFNDAAIAEGLAEALMMISSKNGNQTQQNLD 131

Query: 2066 AQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCAISLS 1887
            + +HCILVAASNPYPLPTPVYRP+ Q++EQSEN +  +D RLSDAE +AKSF QC ISLS
Sbjct: 132  SHKHCILVAASNPYPLPTPVYRPR-QNVEQSENTEIQSDGRLSDAETVAKSFAQCNISLS 190

Query: 1886 IICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSGMLNL 1707
            +ICPK LPKLKAIYNAGK NPRA D   VDN KNPHFLVLIS+NF+EAR AL RSGM N+
Sbjct: 191  VICPKQLPKLKAIYNAGKRNPRAPDP-PVDNGKNPHFLVLISENFIEARVALGRSGMTNI 249

Query: 1706 QSNQNPVKMDVTPAAPALSITGPPLASVPSAN-GSVMSRQPISVGKNIPPATVKVEPTTV 1530
             S Q+PVK+D   AA   S++GPP  SV SAN G+V++RQP SVG  IPPA VK+EPTTV
Sbjct: 250  -STQSPVKVD---AASVASVSGPPSTSVQSANAGAVVNRQPGSVG-TIPPAVVKIEPTTV 304

Query: 1529 PSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPPLRP 1350
             S +GP FPH+PSVPRA+SQ + +LQTSSPIS SQ+M   NEN Q+MKP+V++MT  LRP
Sbjct: 305  TSMSGPTFPHVPSVPRASSQPIPNLQTSSPISASQDMVSTNENIQEMKPIVSSMTQSLRP 364

Query: 1349 AGAA-ANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTXXXXX 1173
             GAA ANVRILNDVAQARQA  GGTS+GL SMGGTP+LSNMISSGM SS+P AQT     
Sbjct: 365  VGAAPANVRILNDVAQARQAFGGGTSMGLQSMGGTPILSNMISSGMTSSIPAAQTLISSG 424

Query: 1172 XXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSMGQTL 993
                     S P+    Q              S V+G+S+L MSQPLSN Q   SMGQT+
Sbjct: 425  QSGVTSVSGSAPVAGNAQGAQNPAPASFPTTTSNVSGSSNLSMSQPLSNHQGGVSMGQTV 484

Query: 992  TGMSQGNLPTTQMVPTG---TGNMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQPVGVN 822
              MSQGNL  TQMV +G     NMM G G +G+PSG GTM+PTPGMSQ +QPGMQP+GVN
Sbjct: 485  PSMSQGNLTGTQMVQSGMTMNQNMMGGIGASGIPSGTGTMIPTPGMSQQVQPGMQPLGVN 544

Query: 821  GNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSSASET 642
             N   A  +MP+            SKYVKVWEGNLSGQRQGQPVFITRLEGYR++SASET
Sbjct: 545  NN---AGANMPLPQQTSNTLPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASET 601

Query: 641  LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQ 462
            LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQ
Sbjct: 602  LAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQ 661

Query: 461  TLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            TLLLSVSDKA RLIGMLFPGDMVVFKPQIP+
Sbjct: 662  TLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 692


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  887 bits (2292), Expect = 0.0
 Identities = 480/703 (68%), Positives = 553/703 (78%), Gaps = 15/703 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQL+VAVEGTAA+GP+WQ +VSDYLDKIIR FCGNE  GQKPS+   ELSLV+FNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y +CLVQRSGWTRD+DL   WLSA+PF+GGGFNDAAIAEGLAEALMMFS ++NG+Q Q
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAA+NPYPLPTPVY+PQ Q++EQ+E+I++ T++RLSDAEA+AKSF QC+
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKLK+IYNAGK NPR AD   VDNVKNPHFLVLISD+FMEARAALSR G
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADP-PVDNVKNPHFLVLISDSFMEARAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + N+ +NQ+PVKMD+   A    ++  P AS+PS NG +M+R  I+VG  +P ATVKVEP
Sbjct: 240  LSNMTANQSPVKMDI---ASVPQVSAAPPASIPSVNG-IMNRPTIAVGA-VPTATVKVEP 294

Query: 1538 TTVPSAT-GPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S T GP FPHIPSVPRAASQ V SLQTSSP STSQEM  N +N QD+KP+V+ ++ 
Sbjct: 295  STVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQ 354

Query: 1361 PLRPA-GAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
             LRP   AAANV ILN+++QARQ     AL+GGTSIGL SMGGT M   +SNMISSGMAS
Sbjct: 355  TLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMAS 414

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP  QT              S  +  T QV             S ++ NS+LG+SQPLS
Sbjct: 415  SVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLS 474

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
            NLQ   SMGQT+ GMSQGNLP  QMV +G G   NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 475  NLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQ 534

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
             +QPGM  +GVN N++ ANM +P              KYVKVWEGNLSGQRQGQPVFITR
Sbjct: 535  QVQPGMPSLGVNNNAA-ANMPLPQQTSGAMQTAQS--KYVKVWEGNLSGQRQGQPVFITR 591

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 592  LEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 651

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI N
Sbjct: 652  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQITN 694


>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum tuberosum]
          Length = 819

 Score =  886 bits (2290), Expect = 0.0
 Identities = 471/690 (68%), Positives = 538/690 (77%), Gaps = 6/690 (0%)
 Frame = -2

Query: 2420 QLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAHGPYS 2241
            +LIVAVEGTAA+GP+W+ IVSDYLDKIIRCF G +S  QK S   VE+SLV+FN HG YS
Sbjct: 4    KLIVAVEGTAALGPYWKTIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSLVMFNTHGSYS 63

Query: 2240 ACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQ-TMDA 2064
            ACLVQRSGWTRDMD    WLSAIPF GGGFNDAA+AEGLAEAL+MFS  NGNQ+Q  M+ 
Sbjct: 64   ACLVQRSGWTRDMDTFLQWLSAIPFLGGGFNDAAVAEGLAEALVMFSGLNGNQSQQNMEG 123

Query: 2063 QRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCAISLSI 1884
            ++HCIL++ SNPYPLPTPVYRPQ Q +EQ+ENI+  TD+RLSDAE +AK+F QC+ISLS+
Sbjct: 124  KKHCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLSDAETVAKAFPQCSISLSV 183

Query: 1883 ICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSGMLNLQ 1704
            +CPK LPKL+AIY+AGK NPRAAD   +D  KNP+FLVLIS+NF+EARAA SRSGM NL 
Sbjct: 184  LCPKKLPKLRAIYDAGKHNPRAADP-PIDTAKNPNFLVLISENFIEARAAFSRSGMTNLA 242

Query: 1703 SNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEPTTVPS 1524
            SN +PVKMDV+   P   ++G    S  +AN SVMSR PIS G NIPPATVK+EP TV S
Sbjct: 243  SNHSPVKMDVSSVLP---VSGTQSISNSAANVSVMSRPPISAG-NIPPATVKIEPNTVTS 298

Query: 1523 ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPPLRP-A 1347
             TGPAF HIPSV R A Q V SLQ SSP+S SQEM  + EN Q+MKP+V+ MT  LRP A
Sbjct: 299  MTGPAFSHIPSV-RPALQPVPSLQASSPLSVSQEMASHTENVQEMKPIVSGMTQSLRPVA 357

Query: 1346 GAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTXXXXXXX 1167
             AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS+MISSGMASSVP +Q        
Sbjct: 358  AAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLSSGQS 417

Query: 1166 XXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSM-GQTLT 990
                   ++P+  + Q               +++GNS++ +SQPL+N Q   SM GQT+ 
Sbjct: 418  GVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPLNNNQRGVSMTGQTVP 477

Query: 989  GMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQPVGVNG 819
            GMSQGNLP TQM+P+GTG   NM++G G TG+PSG GTMMPTPGMSQ  QPGMQPVGVN 
Sbjct: 478  GMSQGNLPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQPVGVNS 537

Query: 818  NSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSSASETL 639
             S  ANM +               KYVKVWEGNLSGQRQGQPVFITRLEGYR++SASE+L
Sbjct: 538  TS--ANMPLSQQQTSAALPSAQS-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASESL 594

Query: 638  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQT 459
            AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL QLQEKKLCAVIQLPSQT
Sbjct: 595  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQT 654

Query: 458  LLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            LLLSVSDKA RLIGMLFPGDMVVFKPQIP+
Sbjct: 655  LLLSVSDKACRLIGMLFPGDMVVFKPQIPS 684


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  871 bits (2250), Expect = 0.0
 Identities = 471/698 (67%), Positives = 540/698 (77%), Gaps = 12/698 (1%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  +QLIVAVEGTAA+GP+WQ +VSDYLDKIIRCF  +E  GQK ST  VEL+LV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+   WLSAIPFSGGGFNDAAIAEGL+EALMMF  + NGNQ Q
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNPYPLPTPVYRPQ Q++EQ+ENI+  T++RLSDAE +AKSF QC+
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK L KLK IY+AGK NPRA D   VDNV+NP FLVLIS+NFME RAALSR G
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDP-PVDNVRNPPFLVLISENFMEGRAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + +L SNQ+PVKMD+   A   S TGPP  SVPS NGS+MSRQP+SVG N+P AT+KVEP
Sbjct: 240  VPSLASNQSPVKMDM---ASVTSGTGPPPTSVPSVNGSMMSRQPVSVG-NVPTATIKVEP 295

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            TT+ S  TGPAFPHIP+VPRA S A+ ++QTSSP +TSQE+  + +N Q++KP V+ MT 
Sbjct: 296  TTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQ 355

Query: 1361 PLRPAGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASSV 1203
            PLRP   AANV ILN+++QAR     AL GGTSIGLPSMG TP+   +SNMISSGMASSV
Sbjct: 356  PLRPVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSV 415

Query: 1202 PPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNL 1023
            PPAQT              S  +  T QV             S VT NS++GMSQP+ N+
Sbjct: 416  PPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNV 475

Query: 1022 QVSGSMGQTLTGMSQGNLPTTQMVPTGTG--NMMSGPGTTGMPSGNGTMMPTPGMSQPMQ 849
            Q   SMGQ++ GMSQGN    QMV +G G    MSG G + + SG GTM P PGMSQ +Q
Sbjct: 476  QSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTGTMFPIPGMSQQVQ 535

Query: 848  PGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEG 669
             GMQ +GV+ NSS A  SMP++           SKYVKVWEGNLSGQRQGQPVFITRLEG
Sbjct: 536  SGMQTLGVS-NSSAA--SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 592

Query: 668  YRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKL 489
            YR++SASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKKL
Sbjct: 593  YRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 652

Query: 488  CAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            CAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 653  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  864 bits (2232), Expect = 0.0
 Identities = 471/703 (66%), Positives = 544/703 (77%), Gaps = 15/703 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQL+VAVEGTAA+GP+WQ +VSDYLDKIIR FCGNE  GQKPS+   ELSLV+FNAH
Sbjct: 1    MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y +CLVQRSGWTRD+DL   WLSA+PF+GGGFNDAAIAEGLAEALMMFS ++NG+Q Q
Sbjct: 61   GSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAA+NPYPLPTPVY+PQ Q++EQ+E+I++ T++RLSDAEA+AKSF QC+
Sbjct: 121  QNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKLK+IYNAGK NPR AD   VDNVKNPHFLVLISD+FMEARAALSR G
Sbjct: 181  VSLSVICPKQLPKLKSIYNAGKRNPRVADP-PVDNVKNPHFLVLISDSFMEARAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + N+ +NQ+PVKMD+   A    ++  P AS+PS NG +M+R  I+VG  +P ATVKVEP
Sbjct: 240  LSNMTANQSPVKMDI---ASVPQVSAAPPASIPSVNG-IMNRPTIAVGA-VPTATVKVEP 294

Query: 1538 TTVPSAT-GPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S T GP FPHIPSVPRAASQ V SLQTSSP STSQEM  N +N QD+KP+V+ ++ 
Sbjct: 295  STVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQ 354

Query: 1361 PLRPA-GAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
             LRP   AAANV ILN+++QARQ     AL+GGTSIGL SMGGT M   +SNMISSGMAS
Sbjct: 355  TLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMAS 414

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP  QT              S  +  T QV             S ++ NS+LG+SQPL 
Sbjct: 415  SVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPL- 473

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
                       + GMSQGNLP  QMV +G G   NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 474  -----------IPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQ 522

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
             +QPGM  +GVN N++ ANM +P              KYVKVWEGNLSGQRQGQPVFITR
Sbjct: 523  QVQPGMPSLGVNNNAA-ANMPLPQQTSGAMQTAQS--KYVKVWEGNLSGQRQGQPVFITR 579

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASE+LAANWP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 580  LEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 639

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI N
Sbjct: 640  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQITN 682


>ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Pyrus x bretschneideri]
            gi|694311125|ref|XP_009356332.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Pyrus x bretschneideri]
            gi|694311127|ref|XP_009356340.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X2 [Pyrus x bretschneideri]
          Length = 839

 Score =  863 bits (2229), Expect = 0.0
 Identities = 467/698 (66%), Positives = 533/698 (76%), Gaps = 12/698 (1%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAV GT A+GP+W  +VSDYLDKIIR FCGNE  GQK ST  VELSLV FN H
Sbjct: 1    MAEKQLIVAVGGTPAMGPYWATVVSDYLDKIIRSFCGNEQSGQKLSTSTVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSS-SNGNQNQ 2076
            G Y  CLVQRSGWTRD+DL  HWLSAIPFSGGGF+DAAIAEGL+EALMMF +  NG+QNQ
Sbjct: 61   GSYCGCLVQRSGWTRDVDLFLHWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGSQNQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D Q+HC+L+AASNP+PLPTPVYRPQ Q++EQ+ENID  T+NRL DAEA+AKSF Q +
Sbjct: 121  QNVDFQKHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQTENRLYDAEAVAKSFPQSS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL+AIYNAGK NPRAAD   +DN KNPHF+VLIS+NFMEARA LSR G
Sbjct: 181  VSLSVICPKQLPKLRAIYNAGKRNPRAADP-PIDNAKNPHFIVLISENFMEARATLSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            +  L SNQ+PVKMD+ P A   S+TGPP  S+PS NG VM+RQPISVG N+PPATVKVEP
Sbjct: 240  ITTLPSNQSPVKMDIAPVA---SVTGPPPTSMPSVNGPVMNRQPISVG-NVPPATVKVEP 295

Query: 1538 TTVPSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPP 1359
            +TV S+ GP+F HIPSV R  SQ V SLQTSSP S SQEM  NN+N  D+KP+V+ +T P
Sbjct: 296  STV-SSMGPSFAHIPSV-RPPSQGVPSLQTSSPSSASQEMATNNDNVPDLKPVVSGVTHP 353

Query: 1358 LRPAGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASSVP 1200
             RP G+     ILN+++QAR     AL GGTS+GLP+MG  PM   +SNMISSGMASSV 
Sbjct: 354  SRPVGS-----ILNNISQARVMNAAALTGGTSMGLPTMGQNPMAMHVSNMISSGMASSVG 408

Query: 1199 PAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQ 1020
             AQ                       QV             S V+GN++LGMSQP+SNLQ
Sbjct: 409  AAQNVFSSSGSGTLT-----------QVAQNPGLNSFTSGTSNVSGNNNLGMSQPMSNLQ 457

Query: 1019 VSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQ 849
               SMGQ + GMSQGNL   QMV +G G   NMMS  G+TG  SG GTM+PTPGM+Q +Q
Sbjct: 458  GGVSMGQAVPGMSQGNLSGQQMVQSGIGMNPNMMSALGSTGASSGTGTMIPTPGMAQQVQ 517

Query: 848  PGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEG 669
             GMQ +G N NS+    ++P +           SKYVKVWEGNLSGQRQGQPVFITRLEG
Sbjct: 518  SGMQSLGANNNSA---SNVPFSQQTSSALASAQSKYVKVWEGNLSGQRQGQPVFITRLEG 574

Query: 668  YRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKL 489
            YR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKKL
Sbjct: 575  YRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 634

Query: 488  CAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            CAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 635  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQV 672


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score =  862 bits (2228), Expect = 0.0
 Identities = 471/701 (67%), Positives = 537/701 (76%), Gaps = 15/701 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ IVSDYL+KIIRCFC NE  GQK S   VELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+  HWLS IPF+GGGFNDAAIAEGL+EALMMFS + NG+QNQ
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNP+PLPTPVYRPQ Q+++Q+EN +   ++RLSDAE +AKSF QC+
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL AIYNA K NPRAAD   VDN KNPHFLVLIS+NFMEARAALSR G
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADP-PVDNSKNPHFLVLISENFMEARAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + NL  NQNPVKMD+   AP  S+TGP   S+PS NG  ++R PISVG N+P ATVKVEP
Sbjct: 240  VANLAPNQNPVKMDI---APVTSVTGPAPTSIPSVNG--INRPPISVG-NVPTATVKVEP 293

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S   GP FPHIPSVPR ASQ V SLQTSSP STSQEM  + ++  ++KPLV+ M+ 
Sbjct: 294  STVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQ 353

Query: 1361 PLRP-AGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
            PLRP A AAANV ILN+++QARQ     AL GGTSIGL SMG TPM   +SNMISSGMAS
Sbjct: 354  PLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMAS 413

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP +Q               S  +  T QV             S ++GNS+  +SQP+ 
Sbjct: 414  SVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMG 473

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
             LQ   SMGQ++ GMSQGN    QMV  G     NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 474  TLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQ 532

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
              Q GMQP+ VN N++V   +M ++           SKYVKVWEG+LSGQRQGQPVFIT+
Sbjct: 533  QAQSGMQPLSVNNNTAV---NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITK 589

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 590  LEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 649

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 650  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 25 [Prunus mume]
          Length = 868

 Score =  860 bits (2222), Expect = 0.0
 Identities = 467/699 (66%), Positives = 532/699 (76%), Gaps = 13/699 (1%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+W  ++SDYLDKIIRCFCGNE  GQKPST  VELSLV F  H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWSTVISDYLDKIIRCFCGNELNGQKPSTSTVELSLVTFYTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSS-SNGNQNQ 2076
            G Y  CLVQRSGWTRD+DL   WLSAIPFSGGGF+DAAIAEGL+EALMMF +  NGNQNQ
Sbjct: 61   GSYCGCLVQRSGWTRDLDLFLQWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGNQNQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D Q+HCIL+AASNP+PLPTPVYRPQ Q++EQ+E+ID  T+NRL DAEA+AKSF QC+
Sbjct: 121  QNVDCQKHCILIAASNPHPLPTPVYRPQLQNLEQNESIDAQTENRLYDAEAVAKSFPQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL+AIYNAGK NPR AD   +DN KNP FLVLIS+NFMEARA LSR G
Sbjct: 181  VSLSVICPKQLPKLRAIYNAGKRNPRVADP-PIDNAKNPQFLVLISENFMEARATLSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
              NL SN +PVKMD+ P A   S+TGPP  S+PS NGSVM+RQP++VG N+PPATVKVEP
Sbjct: 240  STNLPSNPSPVKMDIAPVA---SVTGPPPTSMPSVNGSVMNRQPVAVG-NVPPATVKVEP 295

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S   GPAFPHIPSV R  SQ V SLQTSSP S SQEMT NNEN  D+KP+V+ +T 
Sbjct: 296  STVSSMVAGPAFPHIPSV-RPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPVVSGVTH 354

Query: 1361 PLRPAGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASSV 1203
            P RP G+     ILN+++QAR     AL GGTSIGL +MG  PM   +SNMISSGMASSV
Sbjct: 355  PSRPVGS-----ILNNISQARVMNSAALTGGTSIGLQTMGQNPMAMHVSNMISSGMASSV 409

Query: 1202 PPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNL 1023
              AQ                       QV             S V+GN++LG+SQP+SNL
Sbjct: 410  GAAQNVFSSSGSGTLT-----------QVAQNSGLSSFTSANSNVSGNNNLGISQPMSNL 458

Query: 1022 QVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPM 852
            Q   SMGQ++ GMSQGNL   QMV +  G   NMMS  G++G  SG GTM+PTPG  Q +
Sbjct: 459  QGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSSGSSSGTGTMIPTPGRPQQV 518

Query: 851  QPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLE 672
            Q G+Q +  N NSS  N+  P++           SKYVKVWEGNLSGQRQGQPVFITRLE
Sbjct: 519  QAGIQSLXAN-NSSAPNV--PLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLE 575

Query: 671  GYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKK 492
            GYR++SASETLAANWPPTMQIVRLISQDHMNNKQYVG+ADFLVFRAM+QHGFLGQLQEKK
Sbjct: 576  GYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKK 635

Query: 491  LCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            LCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ+
Sbjct: 636  LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQV 674


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  859 bits (2220), Expect = 0.0
 Identities = 470/701 (67%), Positives = 536/701 (76%), Gaps = 15/701 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ IVSDYL+KIIRCFC NE  GQK S   VELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQKTSASNVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+  HWLS IPF+GGGFNDAAIAEGL+EALMMFS + NG+QNQ
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNP+PLPTPVYRPQ Q+++Q+EN +   ++RLSDAE +AKSF QC+
Sbjct: 121  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL AIYNA K NPRAAD   VDN KNPHFLVLIS+NFMEARAALSR G
Sbjct: 181  VSLSVICPKQLPKLTAIYNAAKRNPRAADP-PVDNSKNPHFLVLISENFMEARAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + NL  NQNPVKMD+   AP  S+TGP   S+PS NG  ++R PISVG N+P ATVKVEP
Sbjct: 240  VANLAPNQNPVKMDI---APVTSVTGPAPTSIPSVNG--INRPPISVG-NVPTATVKVEP 293

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S   GP FPHIPSV R ASQ V SLQTSSP STSQEM  + ++  ++KPLV+ M+ 
Sbjct: 294  STVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQ 353

Query: 1361 PLRP-AGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
            PLRP A AAANV ILN+++QARQ     AL GGTSIGL SMG TPM   +SNMISSGMAS
Sbjct: 354  PLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMAS 413

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP +Q               S  +  T QV             S ++GNS+  +SQP+ 
Sbjct: 414  SVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMG 473

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
             LQ   SMGQ++ GMSQGN    QMV  G     NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 474  TLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQ 532

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
              Q GMQP+ VN N++V   +M ++           SKYVKVWEG+LSGQRQGQPVFIT+
Sbjct: 533  QAQSGMQPLSVNNNTAV---NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITK 589

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 590  LEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 649

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 650  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 690


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  858 bits (2218), Expect = 0.0
 Identities = 464/700 (66%), Positives = 543/700 (77%), Gaps = 14/700 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ+I+SDYL+KIIRCFC NE  GQK +T  VELSLV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQ-N 2079
            G Y ACLVQRSGWT+D+D+   WLSAIPFSGGGFNDAAIAEGL+EALMMF  ++NGNQ +
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120

Query: 2078 QTMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
            Q  D QRHCILVAASNPYPLPTPVYRPQ Q++EQSEN+++ T++RLSDAE +AKSF QC+
Sbjct: 121  QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK L KLKAIY+AGK NPRA+D   VDNV+NP FLVLIS+NFME  AALSRSG
Sbjct: 181  VSLSVICPKQLSKLKAIYSAGKRNPRASDP-PVDNVRNPQFLVLISENFMEGCAALSRSG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + +L  NQ+PVKMD+   A   ++ G P  SVPS NGS+MSRQP+S G N+P ATVKVEP
Sbjct: 240  VPSLAPNQSPVKMDM---ASVNAVAGTPPTSVPSVNGSIMSRQPVSAG-NVPTATVKVEP 295

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            TT+ S A GPAFPHIPSVPRA  QAV  LQTSSP++T++E+  +++N Q++KP V  MT 
Sbjct: 296  TTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMTQ 355

Query: 1361 PLRPAG-AAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASS 1206
            PLRP   AAANV ILN+++QAR     AL+GGTSIGL SMG TP+   +SNMISSGM SS
Sbjct: 356  PLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSGMTSS 415

Query: 1205 VPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSN 1026
            VP AQT              S  +  T QV             S V GNS++G+SQP+ N
Sbjct: 416  VPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGISQPMCN 475

Query: 1025 LQVSGSMGQTLTG-MSQGNLPTTQMVPTGTG--NMMSGPGTTGMPSGNGTMMPTPGMSQP 855
            +Q + SMGQ++ G MSQGN    Q+V TG      MSG G + + SG GT++P PGMSQ 
Sbjct: 476  VQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTGTLIPAPGMSQQ 535

Query: 854  MQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRL 675
            +Q GMQ +GVN NS+    SMP++           SKYVKVWEGNLSGQRQGQPVFITRL
Sbjct: 536  VQSGMQTLGVNNNSAA---SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRL 592

Query: 674  EGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEK 495
            EGYR++SASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEK
Sbjct: 593  EGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 652

Query: 494  KLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQI
Sbjct: 653  KLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQI 692


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  857 bits (2215), Expect = 0.0
 Identities = 463/700 (66%), Positives = 543/700 (77%), Gaps = 14/700 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ+I+SDYL+KIIRCFC NE  GQK +T  VELSLV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVAFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQ-N 2079
            G Y ACLVQRSGWT+D+D+   WLSAIPFSGGGFNDAAIAEGL+EALMMF  ++NGNQ +
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAANGNQTH 120

Query: 2078 QTMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
            Q  D QRHCILVAASNPYPLPTPVYRPQ Q++EQSEN+++ T++RLSDAE +AKSF QC+
Sbjct: 121  QIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK L KLKAIY+AGK NPRA+D   VDNV+NP FLVLIS+NFME  AALSRSG
Sbjct: 181  VSLSVICPKQLSKLKAIYSAGKRNPRASDP-PVDNVRNPQFLVLISENFMEGCAALSRSG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + +L  NQ+PVKMD+   A   S+ G    SVPS NGS+MSRQP+SVG N+P ATVKVEP
Sbjct: 240  VPSLAPNQSPVKMDM---ASVTSVAGTSPTSVPSVNGSIMSRQPVSVG-NVPTATVKVEP 295

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
             T+ S A GPAFPHIPSVPRA  QAV +LQTSSP++T++E+  +++N Q++KP V  MT 
Sbjct: 296  ATITSMANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKPSVGGMTQ 355

Query: 1361 PLRPAG-AAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASS 1206
            PLRP   AAANV ILN+++QAR     AL+GGTSIGL SMG TP+   +SNMISSGM SS
Sbjct: 356  PLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVAMHMSNMISSGMTSS 415

Query: 1205 VPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSN 1026
            VP AQT              S  +  T QV             S V GNS++G+SQP+ N
Sbjct: 416  VPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGISQPMCN 475

Query: 1025 LQVSGSMGQTLTG-MSQGNLPTTQMVPTGTG--NMMSGPGTTGMPSGNGTMMPTPGMSQP 855
            +Q + SMGQ++ G MS GN    Q+V TG      MSG G + + SG GT++PTPG+SQ 
Sbjct: 476  VQGAVSMGQSVPGSMSHGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTGTLIPTPGLSQQ 535

Query: 854  MQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRL 675
            +Q GMQ +GVN NS+    SMP++           SKYVKVWEGNLSGQRQGQPVFITRL
Sbjct: 536  VQSGMQTIGVNNNSAA---SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRL 592

Query: 674  EGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEK 495
            EGYR++SASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEK
Sbjct: 593  EGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEK 652

Query: 494  KLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQI
Sbjct: 653  KLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQI 692


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  856 bits (2212), Expect = 0.0
 Identities = 465/698 (66%), Positives = 534/698 (76%), Gaps = 12/698 (1%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  +QLIVAVEGTAA+GP+WQ +VSDYLDKIIRCF  +E  GQK ST  VEL+LV FN H
Sbjct: 1    MAERQLIVAVEGTAAMGPYWQTVVSDYLDKIIRCFSSSELTGQKTSTSNVELALVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+   WLSAIPFSGGGFNDAAIAEGL+EALMMF  + NGNQ Q
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIAPNGNQTQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNPYPLPTPVYRPQ Q++EQ+ENI+  T++RLSDAE +AKSF QC+
Sbjct: 121  QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK L KLK IY+AGK NPRA D   VDNV+NP FLVLIS+NFME RAALSR G
Sbjct: 181  VSLSVICPKQLSKLKTIYSAGKRNPRAPDP-PVDNVRNPPFLVLISENFMEGRAALSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + +L SNQ+PVKMD              +ASV S NGS+MSRQP+SVG N+P AT+KVEP
Sbjct: 240  VPSLASNQSPVKMD--------------MASVTSVNGSMMSRQPVSVG-NVPTATIKVEP 284

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            TT+ S  TGPAFPHIP+VPRA S A+ ++QTSSP +TSQE+  + +N Q++KP V+ MT 
Sbjct: 285  TTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPSVSGMTQ 344

Query: 1361 PLRPAGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASSV 1203
            PLRP   AANV ILN+++QAR     AL GGTSIGLPSMG TP+   +SNMISSGMASSV
Sbjct: 345  PLRPVPPAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSV 404

Query: 1202 PPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNL 1023
            PPAQT              S  +  T QV             S VT NS++GMSQP+ N+
Sbjct: 405  PPAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNV 464

Query: 1022 QVSGSMGQTLTGMSQGNLPTTQMVPTGTG--NMMSGPGTTGMPSGNGTMMPTPGMSQPMQ 849
            Q   SMGQ++ GMSQGN    QMV +G G    MSG G + + SG GTM P PGMSQ +Q
Sbjct: 465  QSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPSTVSSGTGTMFPIPGMSQQVQ 524

Query: 848  PGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEG 669
             GMQ +GV+ NSS A  SMP++           SKYVKVWEGNLSGQRQGQPVFITRLEG
Sbjct: 525  SGMQTLGVS-NSSAA--SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEG 581

Query: 668  YRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKL 489
            YR++SASETLAA+WP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKKL
Sbjct: 582  YRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 641

Query: 488  CAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            CAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 642  CAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 679


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like [Solanum lycopersicum]
          Length = 805

 Score =  856 bits (2212), Expect = 0.0
 Identities = 460/690 (66%), Positives = 527/690 (76%), Gaps = 6/690 (0%)
 Frame = -2

Query: 2420 QLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAHGPYS 2241
            +LIVAVEGTA +GP+W++IVSDYLDKIIRCF G +S  QK S   VE+S+V+FN HGPYS
Sbjct: 4    KLIVAVEGTAVLGPYWKIIVSDYLDKIIRCFFGVDSTSQKSSAADVEVSMVMFNTHGPYS 63

Query: 2240 ACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSSSNGNQNQT-MDA 2064
            ACLVQRSGWT+DMD    WLSAIPFSGGGFNDAA+AEGLAEAL+MFS  NGNQ Q  M+ 
Sbjct: 64   ACLVQRSGWTKDMDTFLQWLSAIPFSGGGFNDAAVAEGLAEALVMFSVPNGNQTQQKMEG 123

Query: 2063 QRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCAISLSI 1884
            ++HCIL++ SNPYPLPTPVYRPQ Q +EQ+ENI+  TD+RL+DAE +AK+F QC+ISLS+
Sbjct: 124  KKHCILISGSNPYPLPTPVYRPQMQKLEQNENIEAQTDSRLADAETVAKTFPQCSISLSV 183

Query: 1883 ICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSGMLNLQ 1704
            ICPK LPKL+AIY+AGK NPRAAD   +D  KNP+FLVLIS+NF+EARAA SRSG+ NL 
Sbjct: 184  ICPKKLPKLRAIYDAGKHNPRAADP-PIDTAKNPNFLVLISENFIEARAAFSRSGLTNLA 242

Query: 1703 SNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEPTTVPS 1524
            SN +PVKMDV+   P   ++G    S  +AN SV+SR PIS G NIPPATVK+EP TV  
Sbjct: 243  SNHSPVKMDVSSVLP---VSGTQSISNSAANVSVISRPPISAG-NIPPATVKIEPNTVTP 298

Query: 1523 ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPPLRP-A 1347
             TGP F HIPSV R A Q V SLQ SSP+S SQEM  + EN Q+MKP+V+ MT  LRP A
Sbjct: 299  MTGPGFSHIPSV-RPALQPVPSLQASSPLSVSQEMVSHTENVQEMKPIVSGMTQSLRPVA 357

Query: 1346 GAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNMISSGMASSVPPAQTXXXXXXX 1167
             AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS+MISSGMASSVP +Q        
Sbjct: 358  AAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLSSGQS 417

Query: 1166 XXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQVSGSM-GQTLT 990
                   ++P+  + Q                 T NS+     P S    + SM GQT+ 
Sbjct: 418  GVTTMTGAVPLAGSAQN----------------TQNSA-----PSSFTSTAPSMSGQTVP 456

Query: 989  GMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQPGMQPVGVNG 819
             MSQGN+P TQM+P+GTG   NM++G G TG+PSG GTMMPTPGMSQ  QPGMQPVGVN 
Sbjct: 457  AMSQGNIPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQPVGVNS 516

Query: 818  NSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEGYRNSSASETL 639
             S  ANM +               KYVKVWEGNLSGQRQGQPVFITRLEGYR++SASE+L
Sbjct: 517  TS--ANMPLSQQQTSGALPSAQS-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASASESL 573

Query: 638  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQT 459
            AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL QLQEKKLCAVIQLPSQT
Sbjct: 574  AANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLSQLQEKKLCAVIQLPSQT 633

Query: 458  LLLSVSDKAYRLIGMLFPGDMVVFKPQIPN 369
            LLLSVSDKA RLIGMLFPGDMVVFKPQIP+
Sbjct: 634  LLLSVSDKACRLIGMLFPGDMVVFKPQIPS 663


>ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X1 [Pyrus x bretschneideri]
          Length = 846

 Score =  856 bits (2211), Expect = 0.0
 Identities = 467/705 (66%), Positives = 533/705 (75%), Gaps = 19/705 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAV GT A+GP+W  +VSDYLDKIIR FCGNE  GQK ST  VELSLV FN H
Sbjct: 1    MAEKQLIVAVGGTPAMGPYWATVVSDYLDKIIRSFCGNEQSGQKLSTSTVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFSS-SNGNQNQ 2076
            G Y  CLVQRSGWTRD+DL  HWLSAIPFSGGGF+DAAIAEGL+EALMMF +  NG+QNQ
Sbjct: 61   GSYCGCLVQRSGWTRDVDLFLHWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGSQNQ 120

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D Q+HC+L+AASNP+PLPTPVYRPQ Q++EQ+ENID  T+NRL DAEA+AKSF Q +
Sbjct: 121  QNVDFQKHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQTENRLYDAEAVAKSFPQSS 180

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL+AIYNAGK NPRAAD   +DN KNPHF+VLIS+NFMEARA LSR G
Sbjct: 181  VSLSVICPKQLPKLRAIYNAGKRNPRAADP-PIDNAKNPHFIVLISENFMEARATLSRPG 239

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            +  L SNQ+PVKMD+ P A   S+TGPP  S+PS NG VM+RQPISVG N+PPATVKVEP
Sbjct: 240  ITTLPSNQSPVKMDIAPVA---SVTGPPPTSMPSVNGPVMNRQPISVG-NVPPATVKVEP 295

Query: 1538 TTVPSATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTPP 1359
            +TV S+ GP+F HIPSV R  SQ V SLQTSSP S SQEM  NN+N  D+KP+V+ +T P
Sbjct: 296  STV-SSMGPSFAHIPSV-RPPSQGVPSLQTSSPSSASQEMATNNDNVPDLKPVVSGVTHP 353

Query: 1358 LRPAGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMISSGMASSVP 1200
             RP G+     ILN+++QAR     AL GGTS+GLP+MG  PM   +SNMISSGMASSV 
Sbjct: 354  SRPVGS-----ILNNISQARVMNAAALTGGTSMGLPTMGQNPMAMHVSNMISSGMASSVG 408

Query: 1199 PAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLSNLQ 1020
             AQ                       QV             S V+GN++LGMSQP+SNLQ
Sbjct: 409  AAQNVFSSSGSGTLT-----------QVAQNPGLNSFTSGTSNVSGNNNLGMSQPMSNLQ 457

Query: 1019 VSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQPMQ 849
               SMGQ + GMSQGNL   QMV +G G   NMMS  G+TG  SG GTM+PTPGM+Q +Q
Sbjct: 458  GGVSMGQAVPGMSQGNLSGQQMVQSGIGMNPNMMSALGSTGASSGTGTMIPTPGMAQQVQ 517

Query: 848  PGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITRLEG 669
             GMQ +G N NS+    ++P +           SKYVKVWEGNLSGQRQGQPVFITRLEG
Sbjct: 518  SGMQSLGANNNSA---SNVPFSQQTSSALASAQSKYVKVWEGNLSGQRQGQPVFITRLEG 574

Query: 668  YRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQEKKL 489
            YR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQEKKL
Sbjct: 575  YRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKL 634

Query: 488  CAVIQLPSQTLLLSVSDKAYRLIGMLFPG-------DMVVFKPQI 375
            CAVIQLPSQTLLLSVSDKA RLIGMLFPG       DMVVFKPQ+
Sbjct: 635  CAVIQLPSQTLLLSVSDKACRLIGMLFPGLNLPSVQDMVVFKPQV 679


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score =  856 bits (2211), Expect = 0.0
 Identities = 470/701 (67%), Positives = 536/701 (76%), Gaps = 15/701 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ IVSDYL+KIIRCFC NE  GQ  S   VELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+  HWLS IPF+GGGFNDAAIAEGL+EALMMFS + NG+QNQ
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNP+PLPTPVYRPQ Q+++Q+EN +   ++RLSDAE +AKSF QC+
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL AIYNA K NPRAAD   VDN KNPHFLVLIS+NFMEARAALSR G
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADP-PVDNSKNPHFLVLISENFMEARAALSRPG 238

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + NL  NQNPVKMD+   AP  S+TGP   S+PS NG  ++R PISVG N+P ATVKVEP
Sbjct: 239  VANLAPNQNPVKMDI---APVTSVTGPAPTSIPSVNG--INRPPISVG-NVPTATVKVEP 292

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S   GP FPHIPSVPR ASQ V SLQTSSP STSQEM  + ++  ++KPLV+ M+ 
Sbjct: 293  STVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQ 352

Query: 1361 PLRP-AGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
            PLRP A AAANV ILN+++QARQ     AL GGTSIGL SMG TPM   +SNMISSGMAS
Sbjct: 353  PLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMAS 412

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP +Q               S  +  T QV             S ++GNS+  +SQP+ 
Sbjct: 413  SVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMG 472

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
             LQ   SMGQ++ GMSQGN    QMV  G     NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 473  TLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQ 531

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
              Q GMQP+ VN N++V   +M ++           SKYVKVWEG+LSGQRQGQPVFIT+
Sbjct: 532  QAQSGMQPLSVNNNTAV---NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITK 588

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 589  LEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 648

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 649  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 689


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  854 bits (2207), Expect = 0.0
 Identities = 463/706 (65%), Positives = 542/706 (76%), Gaps = 20/706 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ+I+SDYL+KIIRCFC NE  GQK +T  VELSLV FN H
Sbjct: 1    MAEKQLIVAVEGTAAMGPYWQIILSDYLEKIIRCFCSNEFAGQKNTTSNVELSLVTFNTH 60

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-------SS 2094
            G Y ACLVQRSGWT+D+D+   WLSAIPFSGGGFNDAAIAEGL+EALM F        ++
Sbjct: 61   GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMSFDVAQMFPIAA 120

Query: 2093 NGNQ-NQTMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAK 1917
            NGNQ +Q  D QRHCILVAASNPYPLPTPVYRPQ Q++EQSEN+++ T++RLSDAE +AK
Sbjct: 121  NGNQTHQIADGQRHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAK 180

Query: 1916 SFFQCAISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARA 1737
            SF QC++SLS+ICPK L KLKAIY+AGK NPRA+D   VDNV+NP FLVLIS+NFME  A
Sbjct: 181  SFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDP-PVDNVRNPQFLVLISENFMEGCA 239

Query: 1736 ALSRSGMLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPA 1557
            ALSRSG+ +L  NQ+PVKMD+   A   ++ G P  SVPS NGS+MSRQP+S G N+P A
Sbjct: 240  ALSRSGVPSLAPNQSPVKMDM---ASVNAVAGTPPTSVPSVNGSIMSRQPVSAG-NVPTA 295

Query: 1556 TVKVEPTTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPL 1380
            TVKVEPTT+ S A GPAFPHIPSVPRA  QAV  LQTSSP++T++E+  +++N Q++KP 
Sbjct: 296  TVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPS 355

Query: 1379 VNNMTPPLRPAG-AAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNMIS 1224
            V  MT PLRP   AAANV ILN+++QAR     AL+GGTSIGL SMG TP+   +SNMIS
Sbjct: 356  VGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQTPVAMHMSNMIS 415

Query: 1223 SGMASSVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGM 1044
            SGM SSVP AQT              S  +  T QV             S V GNS++G+
Sbjct: 416  SGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSNIGI 475

Query: 1043 SQPLSNLQVSGSMGQTLTG-MSQGNLPTTQMVPTGTG--NMMSGPGTTGMPSGNGTMMPT 873
            SQP+ N+Q + SMGQ++ G MSQGN    Q+V TG      MSG G + + SG GT++P 
Sbjct: 476  SQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPSTVSSGTGTLIPA 535

Query: 872  PGMSQPMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQP 693
            PGMSQ +Q GMQ +GVN NS+    SMP++           SKYVKVWEGNLSGQRQGQP
Sbjct: 536  PGMSQQVQSGMQTLGVNNNSAA---SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQP 592

Query: 692  VFITRLEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFL 513
            VFITRLEGYR++SASETLA++WP TMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFL
Sbjct: 593  VFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFL 652

Query: 512  GQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            GQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQI
Sbjct: 653  GQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQI 698


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  853 bits (2203), Expect = 0.0
 Identities = 469/701 (66%), Positives = 535/701 (76%), Gaps = 15/701 (2%)
 Frame = -2

Query: 2432 MVAKQLIVAVEGTAAIGPFWQMIVSDYLDKIIRCFCGNESMGQKPSTPQVELSLVVFNAH 2253
            M  KQLIVAVEGTAA+GP+WQ IVSDYL+KIIRCFC NE  GQ  S   VELSLV FN H
Sbjct: 1    MSEKQLIVAVEGTAAMGPYWQSIVSDYLEKIIRCFCVNELAGQT-SASNVELSLVTFNTH 59

Query: 2252 GPYSACLVQRSGWTRDMDLLFHWLSAIPFSGGGFNDAAIAEGLAEALMMFS-SSNGNQNQ 2076
            G Y ACLVQRSGWT+D+D+  HWLS IPF+GGGFNDAAIAEGL+EALMMFS + NG+QNQ
Sbjct: 60   GSYCACLVQRSGWTKDVDIFLHWLSTIPFAGGGFNDAAIAEGLSEALMMFSVAPNGSQNQ 119

Query: 2075 -TMDAQRHCILVAASNPYPLPTPVYRPQPQHIEQSENIDTPTDNRLSDAEALAKSFFQCA 1899
              +D QRHCILVAASNP+PLPTPVYRPQ Q+++Q+EN +   ++RLSDAE +AKSF QC+
Sbjct: 120  QNVDGQRHCILVAASNPHPLPTPVYRPQMQNLDQNENNEAQAESRLSDAETVAKSFVQCS 179

Query: 1898 ISLSIICPKNLPKLKAIYNAGKSNPRAADQCAVDNVKNPHFLVLISDNFMEARAALSRSG 1719
            +SLS+ICPK LPKL AIYNA K NPRAAD   VDN KNPHFLVLIS+NFMEARAALSR G
Sbjct: 180  VSLSVICPKQLPKLTAIYNAAKRNPRAADP-PVDNSKNPHFLVLISENFMEARAALSRPG 238

Query: 1718 MLNLQSNQNPVKMDVTPAAPALSITGPPLASVPSANGSVMSRQPISVGKNIPPATVKVEP 1539
            + NL  NQNPVKMD+   AP  S+TGP   S+PS NG  ++R PISVG N+P ATVKVEP
Sbjct: 239  VANLAPNQNPVKMDI---APVTSVTGPAPTSIPSVNG--INRPPISVG-NVPTATVKVEP 292

Query: 1538 TTVPS-ATGPAFPHIPSVPRAASQAVASLQTSSPISTSQEMTPNNENAQDMKPLVNNMTP 1362
            +TV S   GP FPHIPSV R ASQ V SLQTSSP STSQEM  + ++  ++KPLV+ M+ 
Sbjct: 293  STVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPLVSGMSQ 352

Query: 1361 PLRP-AGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNMISSGMAS 1209
            PLRP A AAANV ILN+++QARQ     AL GGTSIGL SMG TPM   +SNMISSGMAS
Sbjct: 353  PLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMAS 412

Query: 1208 SVPPAQTXXXXXXXXXXXXXXSLPIPATGQVXXXXXXXXXXXXXSTVTGNSSLGMSQPLS 1029
            SVP +Q               S  +  T QV             S ++GNS+  +SQP+ 
Sbjct: 413  SVPTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMG 472

Query: 1028 NLQVSGSMGQTLTGMSQGNLPTTQMVPTGTG---NMMSGPGTTGMPSGNGTMMPTPGMSQ 858
             LQ   SMGQ++ GMSQGN    QMV  G     NMMSG G +G+ SG GTM+PTPGMSQ
Sbjct: 473  TLQGGASMGQSV-GMSQGNHSGGQMVQNGISMNQNMMSGLGPSGVSSGTGTMIPTPGMSQ 531

Query: 857  PMQPGMQPVGVNGNSSVANMSMPMNXXXXXXXXXXXSKYVKVWEGNLSGQRQGQPVFITR 678
              Q GMQP+ VN N++V   +M ++           SKYVKVWEG+LSGQRQGQPVFIT+
Sbjct: 532  QAQSGMQPLSVNNNTAV---NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITK 588

Query: 677  LEGYRNSSASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQHGFLGQLQE 498
            LEGYR++SASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAM+QHGFLGQLQE
Sbjct: 589  LEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQE 648

Query: 497  KKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQI 375
            KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQI
Sbjct: 649  KKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQI 689