BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00002113
         (1001 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC ...   534   e-149
ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC ...   534   e-149
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   518   e-144
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   518   e-144
ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC ...   437   e-120
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   437   e-120
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   435   e-119
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   435   e-119
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   434   e-119
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   429   e-117
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      429   e-117
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   428   e-117
emb|CDP08205.1| unnamed protein product [Coffea canephora]            426   e-116
ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC ...   422   e-115
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   421   e-115
gb|AKC88685.1| sigma factor [Francoa sonchifolia]                     420   e-114
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   417   e-114
gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   414   e-113
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   412   e-112
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   412   e-112

>ref|XP_011081725.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Sesamum
            indicum]
          Length = 388

 Score =  534 bits (1376), Expect = e-149
 Identities = 263/318 (82%), Positives = 291/318 (91%)
 Frame = -3

Query: 966  QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAE 787
            +Q K+A ARR  RSRNK+ +IARNE EMSSGVK+VAELEK+R I+EEETG++ SLSSWAE
Sbjct: 71   KQHKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAE 130

Query: 786  AAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 607
            AAG+ K ELQ+ LHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA
Sbjct: 131  AAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 190

Query: 606  ERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGK 427
            ERFDQSRGYKFSTYVQYWIRKSMSTLV+RHARGVRIPCTLSK +NQVQ+A+KAL TSNGK
Sbjct: 191  ERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRARKALSTSNGK 250

Query: 426  YPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVL 247
            YPDD +IAK+TGLSIAKI+S SKCLRVVGSIDQK+GE IS KYMEI PDTS  +PEE V+
Sbjct: 251  YPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDTSILSPEETVI 310

Query: 246  RQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALT 67
            RQHMI D++ LL+GLEPRE+QV+ILRFGLGN QCKSLEEIGR FCVSKEWIRKIER AL 
Sbjct: 311  RQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEWIRKIERAALA 370

Query: 66   KLRNEESLRILSHYVYMQ 13
            KLRNE+SL+ILSHYVYMQ
Sbjct: 371  KLRNEDSLKILSHYVYMQ 388


>ref|XP_011081724.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Sesamum
            indicum]
          Length = 556

 Score =  534 bits (1376), Expect = e-149
 Identities = 263/318 (82%), Positives = 291/318 (91%)
 Frame = -3

Query: 966  QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAE 787
            +Q K+A ARR  RSRNK+ +IARNE EMSSGVK+VAELEK+R I+EEETG++ SLSSWAE
Sbjct: 239  KQHKYASARRASRSRNKRQRIARNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAE 298

Query: 786  AAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 607
            AAG+ K ELQ+ LHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA
Sbjct: 299  AAGIKKKELQQNLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 358

Query: 606  ERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGK 427
            ERFDQSRGYKFSTYVQYWIRKSMSTLV+RHARGVRIPCTLSK +NQVQ+A+KAL TSNGK
Sbjct: 359  ERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRARKALSTSNGK 418

Query: 426  YPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVL 247
            YPDD +IAK+TGLSIAKI+S SKCLRVVGSIDQK+GE IS KYMEI PDTS  +PEE V+
Sbjct: 419  YPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDTSILSPEETVI 478

Query: 246  RQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALT 67
            RQHMI D++ LL+GLEPRE+QV+ILRFGLGN QCKSLEEIGR FCVSKEWIRKIER AL 
Sbjct: 479  RQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEWIRKIERAALA 538

Query: 66   KLRNEESLRILSHYVYMQ 13
            KLRNE+SL+ILSHYVYMQ
Sbjct: 539  KLRNEDSLKILSHYVYMQ 556


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttatus]
          Length = 562

 Score =  518 bits (1335), Expect = e-144
 Identities = 259/322 (80%), Positives = 291/322 (90%)
 Frame = -3

Query: 978  SNDLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLS 799
            S DLQQ KFA+A RT RSRNK+ K ARNE +MSSGVK VAELEK+R  +E+ETG+I SLS
Sbjct: 241  SKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLS 300

Query: 798  SWAEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGV 619
            +WAEAAG+ K ELQ+ LHYGWHCRDELLRST SLVLFIARNY GLGVAFEDLIQAGNIGV
Sbjct: 301  NWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGV 360

Query: 618  LQGAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRT 439
            LQGAERFDQSRGYKFSTYVQYWIRKSMSTLV++HARGVRIPCTLSK +NQV KA+KAL T
Sbjct: 361  LQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRIPCTLSKVINQVHKARKALTT 420

Query: 438  SNGKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPE 259
            SNGKYPDD EIAKFTGLS+AK++S SKCLRVVGSIDQK+GE+++TKYMEI  DTS  +PE
Sbjct: 421  SNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIGEYMTTKYMEILSDTSMPSPE 480

Query: 258  EAVLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIER 79
            EAV+RQHM+ D+ TLL+GLEPRE+QVIILRFGLGN QCKSLEEIGR F VSKEWIRKIER
Sbjct: 481  EAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQCKSLEEIGRLFRVSKEWIRKIER 540

Query: 78   TALTKLRNEESLRILSHYVYMQ 13
            +AL KLRNE+SL+IL+HYV+MQ
Sbjct: 541  SALIKLRNEDSLKILNHYVHMQ 562


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  518 bits (1335), Expect = e-144
 Identities = 259/322 (80%), Positives = 291/322 (90%)
 Frame = -3

Query: 978  SNDLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLS 799
            S DLQQ KFA+A RT RSRNK+ K ARNE +MSSGVK VAELEK+R  +E+ETG+I SLS
Sbjct: 157  SKDLQQLKFAIAGRTPRSRNKRQKTARNEADMSSGVKRVAELEKIRTKLEQETGQIASLS 216

Query: 798  SWAEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGV 619
            +WAEAAG+ K ELQ+ LHYGWHCRDELLRST SLVLFIARNY GLGVAFEDLIQAGNIGV
Sbjct: 217  NWAEAAGIKKKELQQHLHYGWHCRDELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGV 276

Query: 618  LQGAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRT 439
            LQGAERFDQSRGYKFSTYVQYWIRKSMSTLV++HARGVRIPCTLSK +NQV KA+KAL T
Sbjct: 277  LQGAERFDQSRGYKFSTYVQYWIRKSMSTLVAKHARGVRIPCTLSKVINQVHKARKALTT 336

Query: 438  SNGKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPE 259
            SNGKYPDD EIAKFTGLS+AK++S SKCLRVVGSIDQK+GE+++TKYMEI  DTS  +PE
Sbjct: 337  SNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIGEYMTTKYMEILSDTSMPSPE 396

Query: 258  EAVLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIER 79
            EAV+RQHM+ D+ TLL+GLEPRE+QVIILRFGLGN QCKSLEEIGR F VSKEWIRKIER
Sbjct: 397  EAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQCKSLEEIGRLFRVSKEWIRKIER 456

Query: 78   TALTKLRNEESLRILSHYVYMQ 13
            +AL KLRNE+SL+IL+HYV+MQ
Sbjct: 457  SALIKLRNEDSLKILNHYVHMQ 478


>ref|XP_009623297.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            tomentosiformis]
          Length = 560

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/316 (67%), Positives = 266/316 (84%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            DLQQPKF   +RT  SRNK+ KIA+NE EMS GVK+VAELE++R I+EEETG++ S SSW
Sbjct: 243  DLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 302

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAAGV++ ELQ++LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 303  AEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 362

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARG+RIP T+ KA+NQ+ KA+KAL  S+
Sbjct: 363  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 422

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAK+TGLS A+I   SKCLRVVGSIDQK+G+ IS K ME+TPD S  +PEE 
Sbjct: 423  GKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVMELTPDKSIISPEET 482

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 483  VIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRA 542

Query: 72   LTKLRNEESLRILSHY 25
            L+KLR+ +  + L+HY
Sbjct: 543  LSKLRSADCFQDLTHY 558


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/316 (67%), Positives = 266/316 (84%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            DLQQPKF   +RT  SRNK+ KIA+NE EMS GVK+VAELE++R I+EEETG++ S SSW
Sbjct: 255  DLQQPKFFSGKRTHTSRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 314

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAAGV++ ELQ++LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 315  AEAAGVEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 374

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARG+RIP T+ KA+NQ+ KA+KAL  S+
Sbjct: 375  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 434

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAK+TGLS A+I   SKCLRVVGSIDQK+G+ IS K ME+TPD S  +PEE 
Sbjct: 435  GKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVMELTPDKSIISPEET 494

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+R+ +I ++Y LL  L+P+E+QV+  RFGL NHQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 495  VIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRA 554

Query: 72   LTKLRNEESLRILSHY 25
            L+KLR+ +  + L+HY
Sbjct: 555  LSKLRSADCFQDLTHY 570


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
          Length = 554

 Score =  435 bits (1119), Expect = e-119
 Identities = 214/316 (67%), Positives = 263/316 (83%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            D+QQPKF   +RT  SRNK+ KIA+NE EMS GVK+VAELE++R I+EEETG++ S SSW
Sbjct: 237  DMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 296

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAAGV++ ELQ  LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 297  AEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 356

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARG+RIP T+ KA+NQ+ KA+KAL  S+
Sbjct: 357  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 416

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAK+TGLS A+I   SKCLRVVGSIDQK+G  IS K +E+TPD S  +PEE 
Sbjct: 417  GKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGHCISAKVLELTPDKSIVSPEET 476

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+R+ +I ++Y LL  L+P+E+QVI  RFGL NHQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 477  VIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRA 536

Query: 72   LTKLRNEESLRILSHY 25
            LTKLR+ +  + L+HY
Sbjct: 537  LTKLRSADCFQDLTHY 552


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            sylvestris]
          Length = 584

 Score =  435 bits (1119), Expect = e-119
 Identities = 214/316 (67%), Positives = 263/316 (83%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            D+QQPKF   +RT  SRNK+ KIA+NE EMS GVK+VAELE++R I+EEETG++ S SSW
Sbjct: 267  DMQQPKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSW 326

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAAGV++ ELQ  LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 327  AEAAGVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 386

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARG+RIP T+ KA+NQ+ KA+KAL  S+
Sbjct: 387  GAVRFDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSH 446

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAK+TGLS A+I   SKCLRVVGSIDQK+G  IS K +E+TPD S  +PEE 
Sbjct: 447  GKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGHCISAKVLELTPDKSIVSPEET 506

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+R+ +I ++Y LL  L+P+E+QVI  RFGL NHQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 507  VIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRA 566

Query: 72   LTKLRNEESLRILSHY 25
            LTKLR+ +  + L+HY
Sbjct: 567  LTKLRSADCFQDLTHY 582


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  434 bits (1115), Expect = e-119
 Identities = 211/316 (66%), Positives = 264/316 (83%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            DLQQPKF   +RT  SRNK+ KIA+NE EMS GVK+VA+LE++R I+EEETG++ + SSW
Sbjct: 238  DLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSW 297

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAAG+++ ELQ++LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 298  AEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 357

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARGVRIP T+ K +NQ+ KA+K L  S+
Sbjct: 358  GAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSH 417

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAKFTGLS A+I   SKCLRVVGSIDQK+G+ IS K +E+TPD S  +PEE 
Sbjct: 418  GKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEET 477

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+RQ ++ ++Y+LL  L+P+E+QVI  RFGL  HQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 478  VMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRA 537

Query: 72   LTKLRNEESLRILSHY 25
            LTKLRN +  + ++HY
Sbjct: 538  LTKLRNADYFQHITHY 553


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  429 bits (1102), Expect = e-117
 Identities = 205/307 (66%), Positives = 263/307 (85%)
 Frame = -3

Query: 942  RRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAEAAGVDKIE 763
            ++T  S++++  IARNE EMS GVK++A LEK+R  +E+ETG+  SLS WAEAAG+D   
Sbjct: 298  KKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKV 357

Query: 762  LQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRG 583
            LQ+QLH+GW+CRDEL+RSTRSLVLF+ARNY G+G+A EDL+QAGN+GVLQGAERFD +RG
Sbjct: 358  LQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARG 417

Query: 582  YKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGKYPDDCEIA 403
            Y+FSTYVQYWIRKSMS +VSRHARG++IPCTLS+A+NQ+QKA+K L  S+GKYPDD +IA
Sbjct: 418  YRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIA 477

Query: 402  KFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVLRQHMIKDI 223
            +FTGLS+AKI S S+CLRVVGSIDQK+G+  + KY+E   DT+ ++PEEAV+RQHMIKD+
Sbjct: 478  EFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDM 537

Query: 222  YTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALTKLRNEESL 43
            + LL GL+ RERQV+ILR+GL +HQ KSLEEIGR F VSKEW+R++E+  +T+LRNEE+ 
Sbjct: 538  HDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETC 597

Query: 42   RILSHYV 22
            R L +YV
Sbjct: 598  RNLRYYV 604


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  429 bits (1102), Expect = e-117
 Identities = 205/307 (66%), Positives = 263/307 (85%)
 Frame = -3

Query: 942  RRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAEAAGVDKIE 763
            ++T  S++++  IARNE EMS GVK++A LEK+R  +E+ETG+  SLS WAEAAG+D   
Sbjct: 256  KKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEAAGLDMKV 315

Query: 762  LQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRG 583
            LQ+QLH+GW+CRDEL+RSTRSLVLF+ARNY G+G+A EDL+QAGN+GVLQGAERFD +RG
Sbjct: 316  LQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAERFDDARG 375

Query: 582  YKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGKYPDDCEIA 403
            Y+FSTYVQYWIRKSMS +VSRHARG++IPCTLS+A+NQ+QKA+K L  S+GKYPDD +IA
Sbjct: 376  YRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKYPDDEDIA 435

Query: 402  KFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVLRQHMIKDI 223
            +FTGLS+AKI S S+CLRVVGSIDQK+G+  + KY+E   DT+ ++PEEAV+RQHMIKD+
Sbjct: 436  EFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMRQHMIKDM 495

Query: 222  YTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALTKLRNEESL 43
            + LL GL+ RERQV+ILR+GL +HQ KSLEEIGR F VSKEW+R++E+  +T+LRNEE+ 
Sbjct: 496  HDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTRLRNEETC 555

Query: 42   RILSHYV 22
            R L +YV
Sbjct: 556  RNLRYYV 562


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  428 bits (1100), Expect = e-117
 Identities = 202/315 (64%), Positives = 266/315 (84%)
 Frame = -3

Query: 966  QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAE 787
            ++P  +  ++  +S++++  IARNE EM+ G+K++A+LEK+R  +EEET ++ SLS WAE
Sbjct: 244  EKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWAE 303

Query: 786  AAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 607
            AAG+D   LQ+QL +GW+CRDEL++STRSLVL+ ARNY G G+A EDL+QAGN+GVL+GA
Sbjct: 304  AAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGA 363

Query: 606  ERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGK 427
            ERFD +RGY+FSTYVQYWIRKSMS +VSR ARG++IPCTLS+A+ Q+QKA+KAL TSNGK
Sbjct: 364  ERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGK 423

Query: 426  YPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVL 247
            YPDD EIAK+TGLS+AKI S S+CLRVVGSIDQK+GE ++ KY+E  PDTS ++PEE V+
Sbjct: 424  YPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVM 483

Query: 246  RQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALT 67
            RQHMI+D++ LL  L+ RERQV+ILRFGL ++Q KSLEEIGRHF VSKEW+R++E+  +T
Sbjct: 484  RQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMT 543

Query: 66   KLRNEESLRILSHYV 22
            +LRNEE+ R L HY+
Sbjct: 544  RLRNEETCRNLRHYI 558


>emb|CDP08205.1| unnamed protein product [Coffea canephora]
          Length = 599

 Score =  426 bits (1095), Expect = e-116
 Identities = 211/319 (66%), Positives = 267/319 (83%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            D QQ +F+  R++  SR++  KIAR E EMS GVK+V+ELE++R IVEE TG++  +S+W
Sbjct: 281  DAQQVEFSPGRKSSDSRSRSLKIARTEAEMSQGVKLVSELERIRTIVEENTGQVVGMSNW 340

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            AEAA V+   LQ+ L +GW+CRDELLRSTRSLVL+IARNY GLGVAFEDL+QAGN+GVLQ
Sbjct: 341  AEAAQVNIQVLQQHLQFGWYCRDELLRSTRSLVLYIARNYRGLGVAFEDLVQAGNLGVLQ 400

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA+RFD +RGYKFSTYVQYWIRKS+S +V++HARG+RIP +LSKA++Q+QKA+KAL++S+
Sbjct: 401  GAQRFDHTRGYKFSTYVQYWIRKSISMVVAQHARGIRIPSSLSKAISQIQKARKALKSSH 460

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GKYPD  EIAKFTGLS AKI+SVSKCLR+VGSIDQK+G+  S K +E+  DTS R+PEE 
Sbjct: 461  GKYPDVNEIAKFTGLSTAKIMSVSKCLRIVGSIDQKVGDSSSAKRLELISDTSMRSPEET 520

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+RQHM++ +Y L+  LEPRERQV++LRFGL +HQ KSLEEIGR + VSKEW+RKIER A
Sbjct: 521  VVRQHMLQGMYGLMKDLEPRERQVLVLRFGLRSHQRKSLEEIGRLYSVSKEWVRKIERRA 580

Query: 72   LTKLRNEESLRILSHYVYM 16
            LTKLR  +  + LS Y+ M
Sbjct: 581  LTKLRKNDVFQDLSQYMNM 599


>ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
            gi|629114510|gb|KCW79185.1| hypothetical protein
            EUGRSUZ_C00620 [Eucalyptus grandis]
          Length = 556

 Score =  422 bits (1084), Expect = e-115
 Identities = 211/315 (66%), Positives = 256/315 (81%)
 Frame = -3

Query: 969  LQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWA 790
            LQQP  +  RR   S+ ++  IARNE EMS GVK+VAELEKLR I+EEE+G++PSL +WA
Sbjct: 239  LQQPSVSSLRRASNSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWA 298

Query: 789  EAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQG 610
            EAAGVD+  L++ LH+GW CRDELLRSTRSLV+F+ RNY GLG+A EDLIQAGN+GVL+G
Sbjct: 299  EAAGVDENVLRQNLHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRG 358

Query: 609  AERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNG 430
            AERFD +RGY+FSTYVQYWIRKSMS +V+ HARG+RIP TL+ AVNQ+QKAQK+L     
Sbjct: 359  AERFDHTRGYRFSTYVQYWIRKSMSRMVAWHARGIRIPTTLATAVNQIQKAQKSLNNHRR 418

Query: 429  KYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAV 250
            KYPDD EIAK TG S+AK+ S S+CLRVVGSIDQK+G+ I+ KYME TPD S R+PEE V
Sbjct: 419  KYPDDMEIAKLTGFSVAKVRSASQCLRVVGSIDQKIGDCINAKYMEFTPDRSLRSPEETV 478

Query: 249  LRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTAL 70
            LRQ+M   I  LL GL+ RERQV+ILR+GL ++Q KSLEEIGR F VSKEWIR+IER A+
Sbjct: 479  LRQNMSSQIQELLSGLDFRERQVLILRYGLKDNQVKSLEEIGRLFNVSKEWIRRIERKAM 538

Query: 69   TKLRNEESLRILSHY 25
             KLR+++    LSHY
Sbjct: 539  EKLRDKDVYSSLSHY 553


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
          Length = 551

 Score =  421 bits (1083), Expect = e-115
 Identities = 206/316 (65%), Positives = 260/316 (82%)
 Frame = -3

Query: 972  DLQQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSW 793
            DLQQ KF   +RT  SR K+ KIA+NE EMS GVK+VA+LE++R I+EEETG++ + SSW
Sbjct: 234  DLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSW 293

Query: 792  AEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQ 613
            A+AAG+++ ELQ+ LH+GW+CRDELL+STRSLVL++ARNY GLGVAFEDLIQAGN+GVLQ
Sbjct: 294  AKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQ 353

Query: 612  GAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSN 433
            GA RFD +RGYKFSTYVQYWIRKS+S LV++HARGVRIP T+ K +NQ+ KA+K L  S+
Sbjct: 354  GAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSH 413

Query: 432  GKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEA 253
            GK+P D EIAKFTGLS A+I   SKCLRVVGSIDQK+G+ I+ K +E+TPD S  +PEE 
Sbjct: 414  GKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVLELTPDKSVTSPEEF 473

Query: 252  VLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTA 73
            V+RQ ++ ++Y LL  L+P+E+QVI  RFGL  HQ KSLEEIGR + VSKEWIR+IER A
Sbjct: 474  VMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRA 533

Query: 72   LTKLRNEESLRILSHY 25
            LTKLR+ +  + ++HY
Sbjct: 534  LTKLRSADYFQHITHY 549


>gb|AKC88685.1| sigma factor [Francoa sonchifolia]
          Length = 540

 Score =  420 bits (1079), Expect = e-114
 Identities = 205/315 (65%), Positives = 253/315 (80%)
 Frame = -3

Query: 966  QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAE 787
            QQP  + ++R   SR ++  IARNE EMS GVK++ +LE++R  +E+ETG++ SLS+WAE
Sbjct: 222  QQPAHSSSKRGSNSRGRRLMIARNEAEMSRGVKVIQDLERIRTTLEKETGRVVSLSTWAE 281

Query: 786  AAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 607
            AAG+D+  L + L YGW+CRDELLRSTRSLVL++ARNY GLG+A EDL+QAG +GVLQGA
Sbjct: 282  AAGIDEKVLNQDLRYGWYCRDELLRSTRSLVLYLARNYRGLGIASEDLLQAGKLGVLQGA 341

Query: 606  ERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGK 427
            ERFD +RGYK STYVQYWIRKSMS +V++HARGV+IP TLS+ +N+VQKA+KAL  S+GK
Sbjct: 342  ERFDHTRGYKLSTYVQYWIRKSMSRMVAQHARGVQIPYTLSRVINRVQKARKALSNSHGK 401

Query: 426  YPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVL 247
            YPDD EIAK TG+S+ KI S  KCLRVVGSIDQK+      KYME+TPD S   PEE V+
Sbjct: 402  YPDDAEIAKATGISLEKIRSAKKCLRVVGSIDQKMEGCFGVKYMELTPDISIPCPEETVI 461

Query: 246  RQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALT 67
            RQHMIKD+Y  L GL+ RE QV+ILR+GL NH  KSLEEIGR FCVSKEWIR++E+ ALT
Sbjct: 462  RQHMIKDLYNHLQGLDQREMQVLILRYGLNNHHPKSLEEIGRLFCVSKEWIRRVEKKALT 521

Query: 66   KLRNEESLRILSHYV 22
             LR EE+ R L HY+
Sbjct: 522  NLRKEETRRSLIHYL 536


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  417 bits (1071), Expect = e-114
 Identities = 207/325 (63%), Positives = 266/325 (81%), Gaps = 4/325 (1%)
 Frame = -3

Query: 984  MHSNDL----QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETG 817
            M SN L    Q+PK + A+R   SR+++ +IARNE EMS GVK+VA LE++R  +EEETG
Sbjct: 522  MPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETG 581

Query: 816  KIPSLSSWAEAAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQ 637
            +  SLS WAEAAGV +  LQ+ L +GW+CRDELLRSTRSLVL+ ARNY GLG+A EDLIQ
Sbjct: 582  RAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQ 641

Query: 636  AGNIGVLQGAERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKA 457
            AG++GVLQGAERFD +RGY+FSTYVQ+WIRKS+S +V+RHARG+++PCTLS+A+ Q+QKA
Sbjct: 642  AGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKA 701

Query: 456  QKALRTSNGKYPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDT 277
            +KAL  S+GKYPD+  IAKFTGLS+AKI S +KC+RVVGSIDQK+G+ ++ KY+E  PD 
Sbjct: 702  RKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDL 761

Query: 276  STRTPEEAVLRQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEW 97
            S R+PE+ V+RQHM +DI+ LL+GL+ RERQV++LR+GL     KSLEEIGR F VSKEW
Sbjct: 762  SVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEW 821

Query: 96   IRKIERTALTKLRNEESLRILSHYV 22
            IR+IE  A+ KLR++E+ R LSHY+
Sbjct: 822  IRRIEMKAMKKLRDKETCRNLSHYL 846


>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 556

 Score =  414 bits (1065), Expect = e-113
 Identities = 203/315 (64%), Positives = 258/315 (81%)
 Frame = -3

Query: 966  QQPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAE 787
            Q+PK +  +R   SR  +  +ARNE EMS GVK+VA LE++R  +EEETG+I SLS WAE
Sbjct: 240  QKPKRSSPKRMSDSRKGRSAVARNEVEMSKGVKVVANLERIRATLEEETGRIVSLSCWAE 299

Query: 786  AAGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGA 607
            AA + +  LQ+ LHYGW+CRDEL+RSTRSLVL+ ARNY GLG+A EDLIQAG+IGVLQGA
Sbjct: 300  AAKLTEKVLQQHLHYGWYCRDELIRSTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGA 359

Query: 606  ERFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGK 427
            ERFD +RGYKFSTY+QYWIRKS+S +V+RHARG+++PCTLS+A+ Q+QKA+KAL  S+GK
Sbjct: 360  ERFDHTRGYKFSTYIQYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKARKALSKSHGK 419

Query: 426  YPDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVL 247
            YP++ EIAK TGLS++KI S +KC RVVGSIDQK+G++I+ KY+E  PD S  +PE+ V+
Sbjct: 420  YPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDYINAKYLEFIPDASICSPEKTVM 479

Query: 246  RQHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALT 67
            RQHM +DI  LL+GLE RERQV++LR+GL     KSLEEIGR FCVSKEWIR+IE  A+ 
Sbjct: 480  RQHMKEDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFCVSKEWIRRIEMKAMA 539

Query: 66   KLRNEESLRILSHYV 22
            KLR++E+ R LSHY+
Sbjct: 540  KLRDKETCRNLSHYL 554


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  412 bits (1060), Expect = e-112
 Identities = 203/314 (64%), Positives = 251/314 (79%)
 Frame = -3

Query: 963  QPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAEA 784
            +P  +  +RTL SR K+   A+NE EMS GVK+VA LE++R  +EEE G + SLS+WAEA
Sbjct: 246  RPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEA 305

Query: 783  AGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAE 604
            AGVDK  LQ+QL +GW+CRDELLRST SLVL+IARNY G+GVAFED++QAGN+GVLQGAE
Sbjct: 306  AGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAE 365

Query: 603  RFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGKY 424
            RFD ++GY+FSTYVQYWIRKSMSTLV+RHARGV+IP TL++A+ Q+QKA+KAL  S+G+Y
Sbjct: 366  RFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRY 425

Query: 423  PDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVLR 244
            PDD EIAKFTGLS+AKI S   CLRVVGS DQ   +      +E TPDTS ++PEE  ++
Sbjct: 426  PDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQ 485

Query: 243  QHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALTK 64
            Q   KDI+ LL GL+PRERQ+++LR+G G  Q KSLEEIGR F VSKEWIRK+E+TAL  
Sbjct: 486  QCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALAN 545

Query: 63   LRNEESLRILSHYV 22
            LR+EE  + L HYV
Sbjct: 546  LRDEEICQNLRHYV 559


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  412 bits (1060), Expect = e-112
 Identities = 203/314 (64%), Positives = 251/314 (79%)
 Frame = -3

Query: 963  QPKFALARRTLRSRNKKPKIARNEGEMSSGVKMVAELEKLRMIVEEETGKIPSLSSWAEA 784
            +P  +  +RTL SR K+   A+NE EMS GVK+VA LE++R  +EEE G + SLS+WAEA
Sbjct: 296  RPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEA 355

Query: 783  AGVDKIELQRQLHYGWHCRDELLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAE 604
            AGVDK  LQ+QL +GW+CRDELLRST SLVL+IARNY G+GVAFED++QAGN+GVLQGAE
Sbjct: 356  AGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAE 415

Query: 603  RFDQSRGYKFSTYVQYWIRKSMSTLVSRHARGVRIPCTLSKAVNQVQKAQKALRTSNGKY 424
            RFD ++GY+FSTYVQYWIRKSMSTLV+RHARGV+IP TL++A+ Q+QKA+KAL  S+G+Y
Sbjct: 416  RFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRY 475

Query: 423  PDDCEIAKFTGLSIAKIISVSKCLRVVGSIDQKLGEFISTKYMEITPDTSTRTPEEAVLR 244
            PDD EIAKFTGLS+AKI S   CLRVVGS DQ   +      +E TPDTS ++PEE  ++
Sbjct: 476  PDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQ 535

Query: 243  QHMIKDIYTLLHGLEPRERQVIILRFGLGNHQCKSLEEIGRHFCVSKEWIRKIERTALTK 64
            Q   KDI+ LL GL+PRERQ+++LR+G G  Q KSLEEIGR F VSKEWIRK+E+TAL  
Sbjct: 536  QCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALAN 595

Query: 63   LRNEESLRILSHYV 22
            LR+EE  + L HYV
Sbjct: 596  LRDEEICQNLRHYV 609