BLASTX nr result
ID: Perilla23_contig00001783
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Perilla23_contig00001783
(1149 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012835898.1| PREDICTED: chloroplast stem-loop binding pro... 679 0.0
ref|XP_011092178.1| PREDICTED: chloroplast stem-loop binding pro... 674 0.0
ref|XP_009619213.1| PREDICTED: chloroplast stem-loop binding pro... 668 0.0
ref|XP_009780849.1| PREDICTED: chloroplast stem-loop binding pro... 667 0.0
emb|CDP20929.1| unnamed protein product [Coffea canephora] 651 0.0
ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding pro... 648 0.0
ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding pro... 646 0.0
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr... 646 0.0
ref|XP_009148185.1| PREDICTED: chloroplast stem-loop binding pro... 645 0.0
ref|XP_013450437.1| stem-loop-binding protein of 41 kDa protein ... 645 0.0
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 645 0.0
ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding pro... 645 0.0
ref|XP_013641013.1| PREDICTED: chloroplast stem-loop binding pro... 644 0.0
gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina] 644 0.0
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps... 642 0.0
ref|XP_010024151.1| PREDICTED: chloroplast stem-loop binding pro... 642 0.0
ref|XP_008246198.1| PREDICTED: chloroplast stem-loop binding pro... 640 0.0
ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding pro... 639 e-180
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop... 639 e-180
ref|XP_008442117.1| PREDICTED: chloroplast stem-loop binding pro... 639 e-180
>ref|XP_012835898.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Erythranthe guttatus]
gi|604334321|gb|EYU38405.1| hypothetical protein
MIMGU_mgv1a008259mg [Erythranthe guttata]
Length = 379
Score = 679 bits (1751), Expect = 0.0
Identities = 333/370 (90%), Positives = 351/370 (94%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA++VVV HKQP SDF+GARLT+S+QYKR+VWQ K AL V+ASS KKILIMG
Sbjct: 1 MATMVVVHHKQPSSAILSSSLSDFSGARLTASVQYKRKVWQSKSALSVTASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGH+VTLFTRGKAPIAQQLPGES+ +FS+++SKILHLKGDRKDF+
Sbjct: 61 GTRFIGLFLSRLLVKEGHKVTLFTRGKAPIAQQLPGESDTEFSDYASKILHLKGDRKDFE 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTD PPHYEVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDCPPHYEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL SRDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 VDPKSRHKGKLETESLLQSRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQITQLGHVKDLATAFIKVLGN KASKEIFNISGEKYVTFDGLA+ACAKAGGFPEPEII
Sbjct: 241 GIQITQLGHVKDLATAFIKVLGNEKASKEIFNISGEKYVTFDGLAKACAKAGGFPEPEII 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKK FPFRDQHFFASV+KAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKPFPFRDQHFFASVDKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADFSTDDII
Sbjct: 361 EADFSTDDII 370
>ref|XP_011092178.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Sesamum indicum]
Length = 381
Score = 674 bits (1738), Expect = 0.0
Identities = 330/372 (88%), Positives = 351/372 (94%), Gaps = 2/372 (0%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXS--DFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILI 939
MAS+VVV HKQP S DFNGARLT+S+QYKR++WQPKGALRV+ASS KKILI
Sbjct: 1 MASMVVVHHKQPSSTSILLSSSLSDFNGARLTASVQYKRKLWQPKGALRVTASSTKKILI 60
Query: 938 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKD 759
MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADF++FSSKILHLKGDRKD
Sbjct: 61 MGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILHLKGDRKD 120
Query: 758 FDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEV 579
F+FVKSSL+AEGFDVVYDINGREA EVEPIL+ALPNLEQYIYCSSAGVYLK+DYPPH+E+
Sbjct: 121 FEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSDYPPHFEI 180
Query: 578 DAVDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 399
DAVDPKSRHKGKLETESLL SR VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 DAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 240
Query: 398 NSGIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPE 219
NSG+Q+TQLGHVKDLATAFIKVLGN KAS+E+FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 241 NSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKAAGFPEPE 300
Query: 218 IIHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTF 39
I+HYNPKEFDFGKKK FPFRDQHFFASVEKAKSVLG KPEFDLVEGL DSYNLDFGRGTF
Sbjct: 301 IVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTF 360
Query: 38 RKEADFSTDDII 3
RKEADFSTDDII
Sbjct: 361 RKEADFSTDDII 372
>ref|XP_009619213.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Nicotiana tomentosiformis]
Length = 374
Score = 668 bits (1724), Expect = 0.0
Identities = 327/370 (88%), Positives = 348/370 (94%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MASLV VQHKQP SDFNGA+L SSLQ+KR+ QPKGAL V+ASSAKKILIMG
Sbjct: 1 MASLVAVQHKQPSFAVLPSSHSDFNGAKLISSLQFKRKPCQPKGALHVTASSAKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGES+ D+++FSSK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA EVEPILDALPNLEQYIYCSSAGVYLKTDY PH+E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEADA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL SRDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 VDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
G+QITQLGHVKDLATAFI+VLGN KASK++FNISGEKYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK+VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADFSTDD+I
Sbjct: 361 EADFSTDDLI 370
>ref|XP_009780849.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Nicotiana sylvestris]
Length = 378
Score = 667 bits (1721), Expect = 0.0
Identities = 326/370 (88%), Positives = 348/370 (94%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MASLV VQHKQP SDFNGA+L SSLQ+KR+ QPKGAL V+ASSAKKILIMG
Sbjct: 1 MASLVAVQHKQPSFAVLPSSHSDFNGAKLISSLQFKRKPCQPKGALHVTASSAKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGES+ D+++FSSK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA EVEPILDALPNLEQYIYCSSAGVYLKTDY PH+E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEADA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL SRDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 VDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
G+QITQLGHVKDLATAFI+VLGN KASK++FNISGEKYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK+VLG KPEFDLVEGLTDSYNLDFGRGT+RK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNLDFGRGTYRK 360
Query: 32 EADFSTDDII 3
EADFSTDD+I
Sbjct: 361 EADFSTDDLI 370
>emb|CDP20929.1| unnamed protein product [Coffea canephora]
Length = 378
Score = 651 bits (1680), Expect = 0.0
Identities = 318/370 (85%), Positives = 341/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MAS+ VQ KQP SDFNG RLT+S+QYKR+V P+GAL VSAS+AKKILIMG
Sbjct: 1 MASMAAVQAKQPSFSVLPSSLSDFNGIRLTTSVQYKRKVLHPRGALHVSASAAKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIGIFLSR LVKEGHQVTLFTRGKAPIAQQLPGES+ DF++FSSKILHLKGDRKDF+
Sbjct: 61 GTRFIGIFLSRFLVKEGHQVTLFTRGKAPIAQQLPGESDTDFADFSSKILHLKGDRKDFE 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSL+AEGFDVVYDINGREA E EPILDALPNLEQYIYCSSAGVYLK+DY PH+E+DA
Sbjct: 121 FVKSSLAAEGFDVVYDINGREAAEAEPILDALPNLEQYIYCSSAGVYLKSDYLPHFEIDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL +R VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 VDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
G+Q+TQLGHVKDLATAF+KVLGN KASKE+FNISGEKYVTFDGLA+ACAKA GFPEPEII
Sbjct: 241 GMQVTQLGHVKDLATAFVKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPEII 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
H+NPKEFDFGKKK FPFRDQHFFAS+EKAKSVLG KPEF LVEGL DSYNLDFGRGT+RK
Sbjct: 301 HFNPKEFDFGKKKPFPFRDQHFFASIEKAKSVLGWKPEFALVEGLADSYNLDFGRGTYRK 360
Query: 32 EADFSTDDII 3
EADFSTDDII
Sbjct: 361 EADFSTDDII 370
>ref|XP_013586906.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica oleracea var. oleracea]
gi|923877393|ref|XP_013711566.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b, chloroplastic-like
[Brassica napus] gi|674938358|emb|CDX94984.1|
BnaC05g06870D [Brassica napus]
Length = 378
Score = 648 bits (1671), Expect = 0.0
Identities = 318/370 (85%), Positives = 342/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L S +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQSQPSLSLLTSSLSDFNGAKLHSQVQYKRKVQQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPILDALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum tuberosum]
Length = 379
Score = 646 bits (1666), Expect = 0.0
Identities = 314/370 (84%), Positives = 341/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MASLV +Q KQP SDFNGARL SS QYKR+ KGAL+V+ASS KKILIMG
Sbjct: 1 MASLVAIQPKQPSFSVLPSSHSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGES+ D+++FSSK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEG+DVVYDINGREA EVEPILDALPNLEQYIYCSSAGVYLKTDY PH+EVDA
Sbjct: 121 FVKSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
DPKSRHKGKLETESLL SRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 GDPKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
G+QITQLGHVKDLA AF++VLGN KASK++FNISGEKYVTFDGLA+ACAKAGGFPEPE++
Sbjct: 241 GMQITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFF S+EK+K++LG KP+FDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFTSIEKSKALLGWKPDFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
ADFSTDD+I
Sbjct: 361 AADFSTDDMI 370
>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
gi|557095353|gb|ESQ35935.1| hypothetical protein
EUTSA_v10007937mg [Eutrema salsugineum]
Length = 379
Score = 646 bits (1666), Expect = 0.0
Identities = 315/370 (85%), Positives = 342/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V+QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPI+DALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_009148185.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica rapa]
gi|923640343|ref|XP_013641012.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa b, chloroplastic
isoform X1 [Brassica napus] gi|674939829|emb|CDX93509.1|
BnaA06g05390D [Brassica napus]
Length = 378
Score = 645 bits (1665), Expect = 0.0
Identities = 317/370 (85%), Positives = 341/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMMQQSQPSLSLLTSSVSDFNGAKLHLQVQYKRKVQQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPILDALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_013450437.1| stem-loop-binding protein of 41 kDa protein B [Medicago truncatula]
gi|388497252|gb|AFK36692.1| unknown [Medicago truncatula]
gi|657380261|gb|KEH24465.1| stem-loop-binding protein of
41 kDa protein B [Medicago truncatula]
Length = 378
Score = 645 bits (1665), Expect = 0.0
Identities = 316/370 (85%), Positives = 340/370 (91%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA LV +Q Q SDFNGARL + +Q KR+ WQPKG+L VSASS KKILIMG
Sbjct: 1 MARLVALQQNQLSFPPLASSLSDFNGARLQTHIQLKRKTWQPKGSLIVSASSTKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSR LVKEGHQVTLFTRGKAPI QQLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPILDALPNLEQ+IYCSSAGVYLK+D PH E+DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEIDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+DVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP S
Sbjct: 181 VDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQITQLGHVKDLATAF+KVLGN KASK+IFNISG+KYVTFDGLARACAKAGGFPEPEII
Sbjct: 241 GIQITQLGHVKDLATAFLKVLGNEKASKQIFNISGDKYVTFDGLARACAKAGGFPEPEII 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPK+FDFGKKK+FPFRDQHFFASVEKAKSVLGL+P++ LVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDYGLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADFSTDDII
Sbjct: 361 EADFSTDDII 370
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 645 bits (1665), Expect = 0.0
Identities = 314/370 (84%), Positives = 342/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V+QPKGAL VSASS KKILIMG
Sbjct: 1 MAKIMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPI+DALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKY+TFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Solanum lycopersicum]
Length = 379
Score = 645 bits (1663), Expect = 0.0
Identities = 314/370 (84%), Positives = 340/370 (91%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MASLV +Q KQP SDFNGARL SS QYKR+ KGAL+V+ASS KKILIMG
Sbjct: 1 MASLVAIQPKQPSFSLLPSSNSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGES+ D+++FSSK+LHLKGDR DFD
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEG+DVVYDINGREA EVEPILDALPNLEQYIYCSSAGVYLKTDY PH+EVDA
Sbjct: 121 FVKSSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKTDYLPHFEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
DPKSRHKGKLETESLL SRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS
Sbjct: 181 GDPKSRHKGKLETESLLVSRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
G+QITQLGHVKDLA AF++VLGN KASK++FNISGEKYVTFDGLA+ACAKAGGFPEPE++
Sbjct: 241 GMQITQLGHVKDLAKAFVQVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFF S+EK+K+ LG KP+FDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFTSIEKSKAELGWKPDFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
ADFSTDD+I
Sbjct: 361 AADFSTDDMI 370
>ref|XP_013641013.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X2 [Brassica napus]
Length = 378
Score = 644 bits (1662), Expect = 0.0
Identities = 316/370 (85%), Positives = 341/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMMQQSQPSLSLLTSSVSDFNGAKLHLQVQYKRKVQQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPILDALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLV+GLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>gb|KFK43232.1| hypothetical protein AALP_AA1G097200 [Arabis alpina]
Length = 379
Score = 644 bits (1661), Expect = 0.0
Identities = 314/370 (84%), Positives = 341/370 (92%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V+QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPI+DALP LEQYIYCSSAGVYLK+D PH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETES L S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESFLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNI+GEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFVTVLGNEKASREIFNIAGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
gi|482573799|gb|EOA37986.1| hypothetical protein
CARUB_v10009455mg [Capsella rubella]
Length = 379
Score = 642 bits (1656), Expect = 0.0
Identities = 314/370 (84%), Positives = 340/370 (91%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLNSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGK PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPI++ALP LEQYIYCSSAGVYLK+D PH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+KVLGN KAS+EIFNISGEKYVTFDGLARACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLKVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_010024151.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Eucalyptus grandis]
gi|629094586|gb|KCW60581.1| hypothetical protein
EUGRSUZ_H03311 [Eucalyptus grandis]
Length = 382
Score = 642 bits (1655), Expect = 0.0
Identities = 318/373 (85%), Positives = 340/373 (91%), Gaps = 3/373 (0%)
Frame = -2
Query: 1112 MASLVVVQ---HKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKIL 942
MA L+ VQ H SDFNG+RL + +QYKR+V QPKGALRV+ASS KKIL
Sbjct: 1 MAKLMAVQPQHHPPSSISLLPSSFSDFNGSRLHACVQYKRKVGQPKGALRVTASSNKKIL 60
Query: 941 IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRK 762
IMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGES+ DF++FSSKILHLKGDRK
Sbjct: 61 IMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDFADFSSKILHLKGDRK 120
Query: 761 DFDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYE 582
DFDFVKSSL+AEGFDVVYDINGREADEV PILDALPNLEQ+IYCSSAGVYLK+DY PH E
Sbjct: 121 DFDFVKSSLAAEGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKSDYLPHCE 180
Query: 581 VDAVDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 402
DAVDPKSRHKGKLETESLLASRDVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPI
Sbjct: 181 TDAVDPKSRHKGKLETESLLASRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240
Query: 401 PNSGIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEP 222
PNSG QITQLGHVKDLATAFI+VLGN KASK++FNISGEKYVTF+GLA+ACAKA GFPEP
Sbjct: 241 PNSGTQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFEGLAKACAKAAGFPEP 300
Query: 221 EIIHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGT 42
EIIHYNPKEFDFGKKKAFPFRDQHFFASV+KAKSVLG KPEFDLVEGL DSYNLDFGRGT
Sbjct: 301 EIIHYNPKEFDFGKKKAFPFRDQHFFASVDKAKSVLGWKPEFDLVEGLADSYNLDFGRGT 360
Query: 41 FRKEADFSTDDII 3
FRK ADF+TDD+I
Sbjct: 361 FRKAADFTTDDMI 373
>ref|XP_008246198.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X4 [Prunus mume]
Length = 382
Score = 640 bits (1650), Expect = 0.0
Identities = 316/373 (84%), Positives = 341/373 (91%), Gaps = 3/373 (0%)
Frame = -2
Query: 1112 MASLVVVQH---KQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKIL 942
MA LVVVQ +QP SDFNG RL + LQ KRRV QPK AL+V+ASSAKKIL
Sbjct: 1 MARLVVVQQQQQRQPSLSPLPSSLSDFNGTRLHTQLQCKRRVSQPKVALQVTASSAKKIL 60
Query: 941 IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRK 762
IMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGES+ D+++F+SKILHLKGDRK
Sbjct: 61 IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDYTDFASKILHLKGDRK 120
Query: 761 DFDFVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYE 582
D++FVKSSLSAEGFDVVYDINGREA+EV PIL+ LP LEQYIYCSSAGVYLK+D PH+E
Sbjct: 121 DYEFVKSSLSAEGFDVVYDINGREAEEVVPILEGLPKLEQYIYCSSAGVYLKSDQLPHFE 180
Query: 581 VDAVDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 402
DAVDPKSRHKGKLETE+LL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+
Sbjct: 181 TDAVDPKSRHKGKLETETLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPV 240
Query: 401 PNSGIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEP 222
PNSGIQITQLGHVKDLATAFIKVLGN KASKE+FNISGEKYVTFDGLA+ACAKAGGFPEP
Sbjct: 241 PNSGIQITQLGHVKDLATAFIKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAGGFPEP 300
Query: 221 EIIHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGT 42
EI+HYNPKEFDFGKKKAFPFRDQHFFAS++KAKSVLGLKPEFDLVEGL DSYNLDFGRGT
Sbjct: 301 EIVHYNPKEFDFGKKKAFPFRDQHFFASIDKAKSVLGLKPEFDLVEGLADSYNLDFGRGT 360
Query: 41 FRKEADFSTDDII 3
FRKEADFSTDDII
Sbjct: 361 FRKEADFSTDDII 373
>ref|XP_010475766.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Camelina sativa]
Length = 379
Score = 639 bits (1648), Expect = e-180
Identities = 311/370 (84%), Positives = 340/370 (91%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA++ +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKIHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPI+DALP LEQYIYCSSAGVYLK+D PH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL ++ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KASKEIFNISG+KYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASKEIFNISGDKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
chloroplast stem-loop binding protein [Arabidopsis
thaliana]
Length = 378
Score = 639 bits (1648), Expect = e-180
Identities = 312/370 (84%), Positives = 340/370 (91%)
Frame = -2
Query: 1112 MASLVVVQHKQPXXXXXXXXXSDFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMG 933
MA ++++Q QP SDFNGA+L +QYKR+V QPKGAL VSASS KKILIMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 932 GTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFD 753
GTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGES+ DF++FSSKILHLKGDRKD+D
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 752 FVKSSLSAEGFDVVYDINGREADEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDA 573
FVKSSLSAEGFDVVYDINGREA+EVEPIL+ALP LEQYIYCSSAGVYLK+D PH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 572 VDPKSRHKGKLETESLLASRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 393
VDPKSRHKGKLETESLL S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNS
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 392 GIQITQLGHVKDLATAFIKVLGNPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEII 213
GIQI+QLGHVKDLATAF+ VLGN KAS+EIFNISGEKYVTFDGLA+ACAKAGGFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 212 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRK 33
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLG KPEFDLVEGLTDSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 32 EADFSTDDII 3
EADF+TDD+I
Sbjct: 361 EADFTTDDMI 370
>ref|XP_008442117.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Cucumis melo]
Length = 383
Score = 639 bits (1647), Expect = e-180
Identities = 309/348 (88%), Positives = 330/348 (94%)
Frame = -2
Query: 1046 DFNGARLTSSLQYKRRVWQPKGALRVSASSAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 867
DFNGARL + +QYKR+V QPKG L V+AS+ K ILIMGGTRFIGIFLSRLLVKEGHQVTL
Sbjct: 27 DFNGARLHAQVQYKRKVMQPKGGLHVTASAKKNILIMGGTRFIGIFLSRLLVKEGHQVTL 86
Query: 866 FTRGKAPIAQQLPGESEADFSEFSSKILHLKGDRKDFDFVKSSLSAEGFDVVYDINGREA 687
FTRGKAP+ QQLPGESEAD+++F SKILHLKGDRKDFDFVKSSLSA GFDVVYDINGREA
Sbjct: 87 FTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYDINGREA 146
Query: 686 DEVEPILDALPNLEQYIYCSSAGVYLKTDYPPHYEVDAVDPKSRHKGKLETESLLASRDV 507
EVEPILDALP LEQ+IYCSSAGVYLK+D PH+EVDAVDPKSRHKGKLETESLLAS+DV
Sbjct: 147 VEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHFEVDAVDPKSRHKGKLETESLLASKDV 206
Query: 506 NWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAFIKVLG 327
NWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAF++VLG
Sbjct: 207 NWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLATAFVQVLG 266
Query: 326 NPKASKEIFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKEFDFGKKKAFPFRDQHF 147
N KAS+++FNISGEKYVTFDGLA+ACAKAGGFPEPEI+HYNPKEFDFGKKK FPFRDQHF
Sbjct: 267 NDKASQQVFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFRDQHF 326
Query: 146 FASVEKAKSVLGLKPEFDLVEGLTDSYNLDFGRGTFRKEADFSTDDII 3
FASVEKAKSVLG KPEFDLVEGL DSYNLDFGRGTFRKEADFSTDDII
Sbjct: 327 FASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDII 374