BLASTX nr result

ID: Perilla23_contig00000580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Perilla23_contig00000580
         (734 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076877.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...    59   4e-06

>ref|XP_011076877.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein
            NUP1-like [Sesamum indicum]
          Length = 1277

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 41/103 (39%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
 Frame = -1

Query: 734  PSSGNSSISPTNFVAFGTPXXXXXXXXXXXXXXXXXXXXAQGSLFSSASKSFVTAVGTVS 555
            PSSG+SS       AF                        QGSLF++A KS ++  G+VS
Sbjct: 852  PSSGSSSSGNPTIAAFAASNPGSSTFGLGSSVSYSTGSNVQGSLFATAIKSPLSGAGSVS 911

Query: 554  QGTSAQSISVAPPPSSDMN-SSTFVSSLPGSQVSSPVVSFGFN 429
            Q TS QS   A  P  +MN SS+F SSL  SQ   P  SFGF+
Sbjct: 912  QATSVQSFPSASLPLFNMNSSSSFASSLSNSQGFVPNKSFGFS 954


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