BLASTX nr result
ID: Papaver32_contig00036849
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00036849
(559 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 187 3e-54
XP_017631930.1 PREDICTED: pentatricopeptide repeat-containing pr... 184 1e-52
XP_016729081.1 PREDICTED: pentatricopeptide repeat-containing pr... 184 1e-52
XP_017631929.1 PREDICTED: pentatricopeptide repeat-containing pr... 184 2e-52
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 182 3e-52
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 182 3e-52
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 182 3e-52
XP_017631928.1 PREDICTED: pentatricopeptide repeat-containing pr... 184 1e-51
XP_016729080.1 PREDICTED: pentatricopeptide repeat-containing pr... 184 1e-51
XP_018813394.1 PREDICTED: pentatricopeptide repeat-containing pr... 183 3e-51
XP_012481935.1 PREDICTED: pentatricopeptide repeat-containing pr... 180 6e-51
XP_012481933.1 PREDICTED: pentatricopeptide repeat-containing pr... 180 8e-51
XP_016714377.1 PREDICTED: pentatricopeptide repeat-containing pr... 179 1e-50
XP_012481932.1 PREDICTED: pentatricopeptide repeat-containing pr... 180 3e-50
KJB28422.1 hypothetical protein B456_005G047000 [Gossypium raimo... 180 4e-50
EOY05934.1 Pentatricopeptide repeat superfamily protein [Theobro... 180 5e-50
XP_016714376.1 PREDICTED: pentatricopeptide repeat-containing pr... 179 9e-50
GAV69615.1 PPR_1 domain-containing protein/PPR_2 domain-containi... 177 2e-49
XP_016715162.1 PREDICTED: pentatricopeptide repeat-containing pr... 177 4e-49
XP_017608907.1 PREDICTED: pentatricopeptide repeat-containing pr... 175 1e-48
>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
Length = 460
Score = 187 bits (475), Expect = 3e-54
Identities = 89/185 (48%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +S+LI GLC K+ +A KLF++M+E G++PN +T T+I GLC
Sbjct: 178 LFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLC 237
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +PN+V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 238 KAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 296
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 297 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356
Query: 543 MVGIG 557
MV G
Sbjct: 357 MVEKG 361
Score = 183 bits (465), Expect = 1e-52
Identities = 87/185 (47%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 143 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLC 202
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +PN+V+YS +ID LCK G +DEAL LF EMV+ I P+
Sbjct: 203 KAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVE-KGIKPNV 261
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 262 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 321
Query: 543 MVGIG 557
MV G
Sbjct: 322 MVEKG 326
Score = 183 bits (465), Expect = 1e-52
Identities = 87/185 (47%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G P+V+ +S+LI GLC K+ +A KLF++M+E G++PN +T T+I GLC
Sbjct: 213 LFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLC 272
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 331
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 332 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391
Query: 543 MVGIG 557
MV G
Sbjct: 392 MVEKG 396
Score = 177 bits (450), Expect = 2e-50
Identities = 84/185 (45%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 108 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 167
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+YS +ID LCK G +DEAL LF EMV+ I P+
Sbjct: 168 KAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVE-KGIKPNV 226
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V ++TLI+GLCK+ +L EA++LF+ M +G+ + TYN LI+GLC+ G E ++ F+E
Sbjct: 227 VTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEE 286
Query: 543 MVGIG 557
MV G
Sbjct: 287 MVEKG 291
Score = 177 bits (449), Expect = 2e-50
Identities = 84/185 (45%), Positives = 128/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + ++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 38 LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 98 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 156
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY+ LI+GLC+ G E ++ F+E
Sbjct: 157 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEE 216
Query: 543 MVGIG 557
MV G
Sbjct: 217 MVEKG 221
Score = 176 bits (447), Expect = 5e-50
Identities = 83/185 (44%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 73 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 191
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V ++TLI+GLCK+ +L EA++LF+ M +G+ + TY+ LI+GLC+ G E ++ F+E
Sbjct: 192 VTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEE 251
Query: 543 MVGIG 557
MV G
Sbjct: 252 MVEKG 256
Score = 163 bits (413), Expect = 5e-45
Identities = 76/181 (41%), Positives = 122/181 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G P+V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 248 LFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 307
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 366
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY ++ CR ++E + E
Sbjct: 367 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSE 426
Query: 543 M 545
+
Sbjct: 427 V 427
Score = 152 bits (385), Expect = 6e-41
Identities = 76/173 (43%), Positives = 113/173 (65%)
Frame = +3
Query: 39 DVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELH 218
DV A+++++ L + A +LF ++ GV P +T T+I GLC+ G+LD AL+L
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 219 RNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCK 398
M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD V +NTLI+GLCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCK 133
Query: 399 SDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+EMV G
Sbjct: 134 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Score = 127 bits (320), Expect = 1e-31
Identities = 60/154 (38%), Positives = 98/154 (63%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDE 401
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSAD 464
+ + ++ C++ R EA +S + D
Sbjct: 402 LTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
>XP_017631930.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like isoform X3 [Gossypium arboreum]
Length = 511
Score = 184 bits (467), Expect = 1e-52
Identities = 89/185 (48%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 16 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 75
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G ALELHR M NC+ ++++S++IDA CK G VDEA ++FSEMV + +I PDA
Sbjct: 76 SFGHPGMALELHRKMENSNCQGTLLTFSMVIDAFCKDGMVDEAASVFSEMV-LKQISPDA 134
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C+ RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 135 VVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 194
Query: 543 MVGIG 557
MV G
Sbjct: 195 MVENG 199
Score = 115 bits (287), Expect = 1e-26
Identities = 56/181 (30%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 121 VFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 180
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA + M+ PD
Sbjct: 181 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRILDLMIR-RGAKPDI 239
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 240 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQK 299
Query: 543 M 545
M
Sbjct: 300 M 300
Score = 114 bits (284), Expect = 3e-26
Identities = 59/181 (32%), Positives = 107/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G D +++ +I G C K+ +A +LF KM + G++P +T T+I L
Sbjct: 261 LFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLF 320
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EA +LF + +K P
Sbjct: 321 QEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEAFDLFHSLESTNK-KPSI 379
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 380 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 439
Query: 543 M 545
M
Sbjct: 440 M 440
Score = 109 bits (273), Expect = 1e-24
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 156 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 215
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 216 KEGKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLKLDA 274
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 275 FSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNE 334
Query: 543 M 545
M
Sbjct: 335 M 335
Score = 107 bits (268), Expect = 5e-24
Identities = 57/172 (33%), Positives = 91/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G CR+G L A+ +
Sbjct: 99 LLTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFD 158
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 159 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 217
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+ D M RG D TYN L++GLC G E + F +V G
Sbjct: 218 GKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 269
Score = 85.1 bits (209), Expect = 5e-16
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 34/196 (17%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + G P ++ +++LI L + ++ A K+F++M +G P T M+ GLC
Sbjct: 296 LFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLC 355
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM---------- 332
+ G ++ A +L ++ N +P+I +S++ID + + G +EA +F+E+
Sbjct: 356 KHGHIEEAFDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVV 415
Query: 333 ---------------VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSM 440
++ +K+ +PD++ FNTLI+GL + + +A+ L + M
Sbjct: 416 TYNIMLSGLCKQSMSLEANKLLMEMEEKGCIPDSISFNTLIHGLLREKEVEKAMNLLEEM 475
Query: 441 SSRGVSADSYTYNILI 488
R SAD ++L+
Sbjct: 476 RRRNFSADEGVTSLLL 491
>XP_016729081.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Gossypium hirsutum]
XP_016729082.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g12300, mitochondrial-like
isoform X2 [Gossypium hirsutum]
Length = 511
Score = 184 bits (467), Expect = 1e-52
Identities = 89/185 (48%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 16 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 75
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G ALELHR M NC+ ++++S++IDA CK G VDEA ++FSEMV + +I PDA
Sbjct: 76 SFGHPGMALELHRKMENSNCQGTLLTFSMVIDAFCKDGMVDEAASVFSEMV-LKQISPDA 134
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C+ RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 135 VVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 194
Query: 543 MVGIG 557
MV G
Sbjct: 195 MVENG 199
Score = 115 bits (287), Expect = 1e-26
Identities = 56/181 (30%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 121 VFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 180
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA + M+ PD
Sbjct: 181 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRILDLMIR-RGAKPDI 239
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 240 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQK 299
Query: 543 M 545
M
Sbjct: 300 M 300
Score = 112 bits (281), Expect = 8e-26
Identities = 59/181 (32%), Positives = 108/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G D +++ +I G C K+ +A +LF KM + G++P +T T+I L
Sbjct: 261 LFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLF 320
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EAL+LF + +K +
Sbjct: 321 QEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHSLESTNKKL-SI 379
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 380 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 439
Query: 543 M 545
M
Sbjct: 440 M 440
Score = 109 bits (273), Expect = 1e-24
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 156 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 215
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 216 KEGKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLKLDA 274
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 275 FSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNE 334
Query: 543 M 545
M
Sbjct: 335 M 335
Score = 107 bits (268), Expect = 5e-24
Identities = 57/172 (33%), Positives = 91/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G CR+G L A+ +
Sbjct: 99 LLTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFD 158
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 159 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 217
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+ D M RG D TYN L++GLC G E + F +V G
Sbjct: 218 GKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 269
Score = 80.5 bits (197), Expect = 2e-14
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 34/196 (17%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + G P ++ +++LI L + ++ A K+F++M +G P T M+ GLC
Sbjct: 296 LFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLC 355
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM---------- 332
+ G ++ AL+L ++ N + +I +S++ID + + G +EA +F+E+
Sbjct: 356 KHGHIEEALDLFHSLESTNKKLSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVV 415
Query: 333 ---------------VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSM 440
++ +K+ +PD++ FNTLI+GL + + +A+ + M
Sbjct: 416 TYNIMLSGLCKQSMSLEANKLLMEMEEKGCIPDSISFNTLIHGLLREKEVEKAMNRLEEM 475
Query: 441 SSRGVSADSYTYNILI 488
R SAD ++L+
Sbjct: 476 RRRNFSADEGVTSLLL 491
>XP_017631929.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Gossypium arboreum]
Length = 531
Score = 184 bits (467), Expect = 2e-52
Identities = 89/185 (48%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 36 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 95
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G ALELHR M NC+ ++++S++IDA CK G VDEA ++FSEMV + +I PDA
Sbjct: 96 SFGHPGMALELHRKMENSNCQGTLLTFSMVIDAFCKDGMVDEAASVFSEMV-LKQISPDA 154
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C+ RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 155 VVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 214
Query: 543 MVGIG 557
MV G
Sbjct: 215 MVENG 219
Score = 115 bits (287), Expect = 1e-26
Identities = 56/181 (30%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 141 VFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 200
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA + M+ PD
Sbjct: 201 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRILDLMIR-RGAKPDI 259
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 260 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQK 319
Query: 543 M 545
M
Sbjct: 320 M 320
Score = 114 bits (284), Expect = 3e-26
Identities = 59/181 (32%), Positives = 107/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G D +++ +I G C K+ +A +LF KM + G++P +T T+I L
Sbjct: 281 LFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLF 340
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EA +LF + +K P
Sbjct: 341 QEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEAFDLFHSLESTNK-KPSI 399
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 400 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 459
Query: 543 M 545
M
Sbjct: 460 M 460
Score = 109 bits (273), Expect = 1e-24
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 176 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 235
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 236 KEGKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLKLDA 294
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 295 FSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNE 354
Query: 543 M 545
M
Sbjct: 355 M 355
Score = 107 bits (268), Expect = 5e-24
Identities = 57/172 (33%), Positives = 91/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G CR+G L A+ +
Sbjct: 119 LLTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFD 178
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 179 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 237
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+ D M RG D TYN L++GLC G E + F +V G
Sbjct: 238 GKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 289
Score = 85.1 bits (209), Expect = 5e-16
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 34/196 (17%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + G P ++ +++LI L + ++ A K+F++M +G P T M+ GLC
Sbjct: 316 LFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLC 375
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM---------- 332
+ G ++ A +L ++ N +P+I +S++ID + + G +EA +F+E+
Sbjct: 376 KHGHIEEAFDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVV 435
Query: 333 ---------------VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSM 440
++ +K+ +PD++ FNTLI+GL + + +A+ L + M
Sbjct: 436 TYNIMLSGLCKQSMSLEANKLLMEMEEKGCIPDSISFNTLIHGLLREKEVEKAMNLLEEM 495
Query: 441 SSRGVSADSYTYNILI 488
R SAD ++L+
Sbjct: 496 RRRNFSADEGVTSLLL 511
Score = 75.9 bits (185), Expect = 9e-13
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Frame = +3
Query: 108 LFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALC 287
++ K+ G++PN T ++ C++ ++ + + K EP++V+ S+++ +C
Sbjct: 1 MYRKLNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIKRGFEPDLVTVSILLKGMC 60
Query: 288 KRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGL------------------------- 392
G V +A+ +F +M + D V++ LINGL
Sbjct: 61 ADGKVLDAVQVFDKMCE-RGFQGDGVIYGILINGLCSFGHPGMALELHRKMENSNCQGTL 119
Query: 393 ----------CKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
CK + EA +F M + +S D+ Y LI+G CR G KE + FDE
Sbjct: 120 LTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDE 179
Query: 543 MVGIG 557
MV G
Sbjct: 180 MVSRG 184
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 182 bits (462), Expect = 3e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 213 LFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 272
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 331
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 332 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391
Query: 543 MVGIG 557
MV G
Sbjct: 392 MVEKG 396
Score = 181 bits (460), Expect = 6e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 178 LFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLC 237
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 238 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 296
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 297 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356
Query: 543 MVGIG 557
MV G
Sbjct: 357 MVEKG 361
Score = 177 bits (450), Expect = 2e-50
Identities = 84/185 (45%), Positives = 128/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 73 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 191
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V + TLI+GLCK+ +L EA++LF+ M +G+ D TY LI+GLC+ G E ++ F+E
Sbjct: 192 VTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEE 251
Query: 543 MVGIG 557
MV G
Sbjct: 252 MVEKG 256
Score = 177 bits (448), Expect = 3e-50
Identities = 84/185 (45%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + ++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 38 LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 98 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 156
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY LI+GLC+ G E ++ F+E
Sbjct: 157 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEE 216
Query: 543 MVGIG 557
MV G
Sbjct: 217 MVEKG 221
Score = 165 bits (418), Expect = 9e-46
Identities = 77/181 (42%), Positives = 122/181 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 248 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 307
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 366
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY ++ CR ++E + E
Sbjct: 367 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSE 426
Query: 543 M 545
+
Sbjct: 427 V 427
Score = 152 bits (385), Expect = 6e-41
Identities = 76/173 (43%), Positives = 113/173 (65%)
Frame = +3
Query: 39 DVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELH 218
DV A+++++ L + A +LF ++ GV P +T T+I GLC+ G+LD AL+L
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 219 RNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCK 398
M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD V +NTLI+GLCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCK 133
Query: 399 SDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+EMV G
Sbjct: 134 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Score = 127 bits (320), Expect = 1e-31
Identities = 60/154 (38%), Positives = 98/154 (63%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDE 401
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSAD 464
+ + ++ C++ R EA +S + D
Sbjct: 402 LTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
Length = 460
Score = 182 bits (462), Expect = 3e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 178 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLC 237
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 238 KAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 296
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 297 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356
Query: 543 MVGIG 557
MV G
Sbjct: 357 MVEKG 361
Score = 180 bits (456), Expect = 2e-51
Identities = 85/185 (45%), Positives = 129/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 73 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 191
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ TYN LI+GLC+ G E ++ F+E
Sbjct: 192 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEE 251
Query: 543 MVGIG 557
MV G
Sbjct: 252 MVEKG 256
Score = 180 bits (456), Expect = 2e-51
Identities = 85/185 (45%), Positives = 129/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 213 LFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLC 272
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 331
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 332 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391
Query: 543 MVGIG 557
MV G
Sbjct: 392 MVEKG 396
Score = 179 bits (454), Expect = 4e-51
Identities = 85/185 (45%), Positives = 128/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + ++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 38 LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 98 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 156
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 157 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 216
Query: 543 MVGIG 557
MV G
Sbjct: 217 MVEKG 221
Score = 163 bits (412), Expect = 7e-45
Identities = 76/181 (41%), Positives = 121/181 (66%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 248 LFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 307
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 366
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY ++ CR ++E + E
Sbjct: 367 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSE 426
Query: 543 M 545
+
Sbjct: 427 V 427
Score = 152 bits (385), Expect = 6e-41
Identities = 76/173 (43%), Positives = 113/173 (65%)
Frame = +3
Query: 39 DVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELH 218
DV A+++++ L + A +LF ++ GV P +T T+I GLC+ G+LD AL+L
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 219 RNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCK 398
M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD V +NTLI+GLCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCK 133
Query: 399 SDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+EMV G
Sbjct: 134 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Score = 127 bits (320), Expect = 1e-31
Identities = 60/154 (38%), Positives = 98/154 (63%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDE 401
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSAD 464
+ + ++ C++ R EA +S + D
Sbjct: 402 LTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 182 bits (462), Expect = 3e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 73 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 191
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 192 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 251
Query: 543 MVGIG 557
MV G
Sbjct: 252 MVEKG 256
Score = 182 bits (462), Expect = 3e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 178 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 237
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 238 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 296
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 297 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356
Query: 543 MVGIG 557
MV G
Sbjct: 357 MVEKG 361
Score = 182 bits (462), Expect = 3e-52
Identities = 86/185 (46%), Positives = 130/185 (70%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 213 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 272
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 331
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 332 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391
Query: 543 MVGIG 557
MV G
Sbjct: 392 MVEKG 396
Score = 179 bits (454), Expect = 4e-51
Identities = 85/185 (45%), Positives = 128/185 (69%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + ++G P V+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 38 LFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 97
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 98 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDV 156
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+E
Sbjct: 157 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEE 216
Query: 543 MVGIG 557
MV G
Sbjct: 217 MVEKG 221
Score = 165 bits (418), Expect = 9e-46
Identities = 77/181 (42%), Positives = 122/181 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 248 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 307
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDV 366
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI+GLCK+ +L EA++LF+ M +G+ D TY ++ CR ++E + E
Sbjct: 367 VTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSE 426
Query: 543 M 545
+
Sbjct: 427 V 427
Score = 152 bits (385), Expect = 6e-41
Identities = 76/173 (43%), Positives = 113/173 (65%)
Frame = +3
Query: 39 DVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELH 218
DV A+++++ L + A +LF ++ GV P +T T+I GLC+ G+LD AL+L
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 219 RNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCK 398
M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD V +NTLI+GLCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDVVTYNTLIDGLCK 133
Query: 399 SDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ +L EA++LF+ M +G+ D TYN LI+GLC+ G E ++ F+EMV G
Sbjct: 134 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG 186
Score = 127 bits (320), Expect = 1e-31
Identities = 60/154 (38%), Positives = 98/154 (63%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++++G PDV+ +++LI GLC K+ +A KLF++M+E G++P+ +T T+I GLC
Sbjct: 283 LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 342
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+LD AL+L M + +P++V+Y+ +ID LCK G +DEAL LF EMV+ I PD
Sbjct: 343 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE-KGIKPDE 401
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSAD 464
+ + ++ C++ R EA +S + D
Sbjct: 402 LTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 435
>XP_017631928.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium arboreum]
Length = 643
Score = 184 bits (467), Expect = 1e-51
Identities = 89/185 (48%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 148 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 207
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G ALELHR M NC+ ++++S++IDA CK G VDEA ++FSEMV + +I PDA
Sbjct: 208 SFGHPGMALELHRKMENSNCQGTLLTFSMVIDAFCKDGMVDEAASVFSEMV-LKQISPDA 266
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C+ RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 267 VVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 326
Query: 543 MVGIG 557
MV G
Sbjct: 327 MVENG 331
Score = 115 bits (287), Expect = 2e-26
Identities = 56/181 (30%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 253 VFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 312
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA + M+ PD
Sbjct: 313 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRILDLMIR-RGAKPDI 371
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 372 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQK 431
Query: 543 M 545
M
Sbjct: 432 M 432
Score = 114 bits (284), Expect = 5e-26
Identities = 59/181 (32%), Positives = 107/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G D +++ +I G C K+ +A +LF KM + G++P +T T+I L
Sbjct: 393 LFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLF 452
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EA +LF + +K P
Sbjct: 453 QEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEAFDLFHSLESTNK-KPSI 511
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 512 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 571
Query: 543 M 545
M
Sbjct: 572 M 572
Score = 109 bits (273), Expect = 1e-24
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 288 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 347
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 348 KEGKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLKLDA 406
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 407 FSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNE 466
Query: 543 M 545
M
Sbjct: 467 M 467
Score = 107 bits (268), Expect = 7e-24
Identities = 57/172 (33%), Positives = 91/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G CR+G L A+ +
Sbjct: 231 LLTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFD 290
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 291 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 349
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+ D M RG D TYN L++GLC G E + F +V G
Sbjct: 350 GKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 401
Score = 85.1 bits (209), Expect = 6e-16
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 34/196 (17%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + G P ++ +++LI L + ++ A K+F++M +G P T M+ GLC
Sbjct: 428 LFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLC 487
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM---------- 332
+ G ++ A +L ++ N +P+I +S++ID + + G +EA +F+E+
Sbjct: 488 KHGHIEEAFDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVV 547
Query: 333 ---------------VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSM 440
++ +K+ +PD++ FNTLI+GL + + +A+ L + M
Sbjct: 548 TYNIMLSGLCKQSMSLEANKLLMEMEEKGCIPDSISFNTLIHGLLREKEVEKAMNLLEEM 607
Query: 441 SSRGVSADSYTYNILI 488
R SAD ++L+
Sbjct: 608 RRRNFSADEGVTSLLL 623
Score = 76.3 bits (186), Expect = 7e-13
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 FSSLIKGLCLQEKI--YDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRN 224
F ++ C KI +DA FDK++ P T ++ + ++ + ++R
Sbjct: 57 FEYFVRRQCKSGKITLHDALTYFDKLVTTEPSPLIQTFNIVLDSVSKLKCNSNVFSMYRK 116
Query: 225 MGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKSD 404
+ +PN+ + S+++++ C+ + +F E++ PD V + L+ G+C
Sbjct: 117 LNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIK-RGFEPDLVTVSILLKGMCADG 175
Query: 405 RLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRG 509
++ +AV++FD M RG D Y ILINGLC G
Sbjct: 176 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSFG 210
Score = 75.9 bits (185), Expect = 9e-13
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Frame = +3
Query: 108 LFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALC 287
++ K+ G++PN T ++ C++ ++ + + K EP++V+ S+++ +C
Sbjct: 113 MYRKLNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIKRGFEPDLVTVSILLKGMC 172
Query: 288 KRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGL------------------------- 392
G V +A+ +F +M + D V++ LINGL
Sbjct: 173 ADGKVLDAVQVFDKMCE-RGFQGDGVIYGILINGLCSFGHPGMALELHRKMENSNCQGTL 231
Query: 393 ----------CKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
CK + EA +F M + +S D+ Y LI+G CR G KE + FDE
Sbjct: 232 LTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDE 291
Query: 543 MVGIG 557
MV G
Sbjct: 292 MVSRG 296
>XP_016729080.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
Length = 643
Score = 184 bits (467), Expect = 1e-51
Identities = 89/185 (48%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 148 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 207
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G ALELHR M NC+ ++++S++IDA CK G VDEA ++FSEMV + +I PDA
Sbjct: 208 SFGHPGMALELHRKMENSNCQGTLLTFSMVIDAFCKDGMVDEAASVFSEMV-LKQISPDA 266
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C+ RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 267 VVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 326
Query: 543 MVGIG 557
MV G
Sbjct: 327 MVENG 331
Score = 115 bits (287), Expect = 2e-26
Identities = 56/181 (30%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 253 VFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 312
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA + M+ PD
Sbjct: 313 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRILDLMIR-RGAKPDI 371
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 372 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQK 431
Query: 543 M 545
M
Sbjct: 432 M 432
Score = 112 bits (281), Expect = 1e-25
Identities = 59/181 (32%), Positives = 108/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G D +++ +I G C K+ +A +LF KM + G++P +T T+I L
Sbjct: 393 LFGLIVDQGLKLDAFSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLF 452
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EAL+LF + +K +
Sbjct: 453 QEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHSLESTNKKL-SI 511
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 512 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 571
Query: 543 M 545
M
Sbjct: 572 M 572
Score = 109 bits (273), Expect = 1e-24
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 288 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 347
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 348 KEGKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLKLDA 406
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 407 FSYNIMISGYCKSWKMDEAFELFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNE 466
Query: 543 M 545
M
Sbjct: 467 M 467
Score = 107 bits (268), Expect = 7e-24
Identities = 57/172 (33%), Positives = 91/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G CR+G L A+ +
Sbjct: 231 LLTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFD 290
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 291 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 349
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+ D M RG D TYN L++GLC G E + F +V G
Sbjct: 350 GKTGEAQRILDLMIRRGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 401
Score = 80.5 bits (197), Expect = 2e-14
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 34/196 (17%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + G P ++ +++LI L + ++ A K+F++M +G P T M+ GLC
Sbjct: 428 LFQKMHDNGIKPTIVTYNTLIGMLFQEGQVSTAEKMFNEMHVYGQSPALSTYTVMLDGLC 487
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM---------- 332
+ G ++ AL+L ++ N + +I +S++ID + + G +EA +F+E+
Sbjct: 488 KHGHIEEALDLFHSLESTNKKLSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVV 547
Query: 333 ---------------VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSM 440
++ +K+ +PD++ FNTLI+GL + + +A+ + M
Sbjct: 548 TYNIMLSGLCKQSMSLEANKLLMEMEEKGCIPDSISFNTLIHGLLREKEVEKAMNRLEEM 607
Query: 441 SSRGVSADSYTYNILI 488
R SAD ++L+
Sbjct: 608 RRRNFSADEGVTSLLL 623
Score = 76.3 bits (186), Expect = 7e-13
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 FSSLIKGLCLQEKI--YDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRN 224
F ++ C KI +DA FDK++ P T ++ + ++ + ++R
Sbjct: 57 FEYFVRRQCKSGKITLHDALTYFDKLVTTEPSPLIQTFNIVLDSVSKLKCNSNVFSMYRK 116
Query: 225 MGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKSD 404
+ +PN+ + S+++++ C+ + +F E++ PD V + L+ G+C
Sbjct: 117 LNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIK-RGFEPDLVTVSILLKGMCADG 175
Query: 405 RLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRG 509
++ +AV++FD M RG D Y ILINGLC G
Sbjct: 176 KVLDAVQVFDKMCERGFQGDGVIYGILINGLCSFG 210
Score = 75.9 bits (185), Expect = 9e-13
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Frame = +3
Query: 108 LFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALC 287
++ K+ G++PN T ++ C++ ++ + + K EP++V+ S+++ +C
Sbjct: 113 MYRKLNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIKRGFEPDLVTVSILLKGMC 172
Query: 288 KRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGL------------------------- 392
G V +A+ +F +M + D V++ LINGL
Sbjct: 173 ADGKVLDAVQVFDKMCE-RGFQGDGVIYGILINGLCSFGHPGMALELHRKMENSNCQGTL 231
Query: 393 ----------CKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
CK + EA +F M + +S D+ Y LI+G CR G KE + FDE
Sbjct: 232 LTFSMVIDAFCKDGMVDEAASVFSEMVLKQISPDAVVYGSLIHGFCRLGRLKEAVNVFDE 291
Query: 543 MVGIG 557
MV G
Sbjct: 292 MVSRG 296
>XP_018813394.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Juglans regia]
Length = 652
Score = 183 bits (465), Expect = 3e-51
Identities = 89/185 (48%), Positives = 124/185 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I KRG++PDV+ +L+KGLC +++ A +LFDK+ E + + I GT+I G C
Sbjct: 153 LFGEIAKRGFEPDVVTVGTLVKGLCNDGRVHYALQLFDKLCEKRLGESEIIYGTLIDGFC 212
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
++ E+ ALE+HR M K C+ N+++Y +IIDALCK G + EA+ +FSEM+D I PD
Sbjct: 213 KMHEIGRALEMHRRMVKAECKVNVLTYGMIIDALCKDGLISEAMEMFSEMIDAG-IHPDV 271
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+++LI+G C R EAV+LF M R +S D TYN LI+G C+ GLWKE F +
Sbjct: 272 VVYSSLIDGFCSLGRFKEAVKLFKEMVGREISVDLVTYNTLIHGFCQSGLWKEATIIFKQ 331
Query: 543 MVGIG 557
MVG G
Sbjct: 332 MVGQG 336
Score = 116 bits (291), Expect = 5e-27
Identities = 59/181 (32%), Positives = 102/181 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ G PDV+ +SSLI G C + +A KLF +M+ + + +T T+I G C
Sbjct: 258 MFSEMIDAGIHPDVVVYSSLIDGFCSLGRFKEAVKLFKEMVGREISVDLVTYNTLIHGFC 317
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G A + + M P +V+++++ID LCK G + EA +F M+ K P+
Sbjct: 318 QSGLWKEATIIFKQMVGQGICPCVVTFTILIDCLCKEGKMAEACGIFKLMIKQGK-EPNL 376
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
++++++GLC RL +A +LF+ M +G+ D +YN++I+G C+ E I+ F E
Sbjct: 377 YTYSSVMSGLCLVGRLDDAEKLFNMMVDKGLKLDVVSYNVMISGYCKSWKTNEAIQLFQE 436
Query: 543 M 545
M
Sbjct: 437 M 437
Score = 115 bits (287), Expect = 2e-26
Identities = 66/175 (37%), Positives = 100/175 (57%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ +G P V+ F+ LI LC + K+ +A +F MI+ G +PN T ++++GLC
Sbjct: 328 IFKQMVGQGICPCVVTFTILIDCLCKEGKMAEACGIFKLMIKQGKEPNLYTYSSVMSGLC 387
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
VG LD A +L M + ++VSY+V+I CK +EA+ LF EM + P A
Sbjct: 388 LVGRLDDAEKLFNMMVDKGLKLDVVSYNVMISGYCKSWKTNEAIQLFQEM-QCKGLKPTA 446
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETI 527
V +NTLI LC + R+ A +LF M S G S TY+ L+ GLC+ G +E +
Sbjct: 447 VSYNTLIGALCHAGRVRTAHKLFKEMQSSGPSPVFATYSALLGGLCKNGQIEEAM 501
Score = 114 bits (285), Expect = 4e-26
Identities = 60/185 (32%), Positives = 108/185 (58%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++K+G +P++ +SS++ GLCL ++ DA KLF+ M++ G++ + ++ MI+G C
Sbjct: 363 IFKLMIKQGKEPNLYTYSSVMSGLCLVGRLDDAEKLFNMMVDKGLKLDVVSYNVMISGYC 422
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ + + A++L + M +P VSY+ +I ALC G V A LF EM S P
Sbjct: 423 KSWKTNEAIQLFQEMQCKGLKPTAVSYNTLIGALCHAGRVRTAHKLFKEM-QSSGPSPVF 481
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
++ L+ GLCK+ ++ EA+ L S+ S + +N+LI+G+C+ G +E + +E
Sbjct: 482 ATYSALLGGLCKNGQIEEAMDLLQSLESTKSESGIQFFNLLIDGMCKAGKLEEARKKLEE 541
Query: 543 MVGIG 557
+ G
Sbjct: 542 ISSNG 546
Score = 102 bits (255), Expect = 4e-22
Identities = 53/167 (31%), Positives = 93/167 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + +G P +++++LI LC ++ A KLF +M G P T ++ GLC
Sbjct: 433 LFQEMQCKGLKPTAVSYNTLIGALCHAGRVRTAHKLFKEMQSSGPSPVFATYSALLGGLC 492
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+++ A++L +++ E I ++++ID +CK G ++EA E + + +VP+
Sbjct: 493 KNGQIEEAMDLLQSLESTKSESGIQFFNLLIDGMCKAGKLEEARKKLEE-ISSNGLVPNV 551
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCR 503
+N++I+GLCK EA L M +G DS ++NI+I GL R
Sbjct: 552 STYNSMIDGLCKKGMSLEACELLMQMEEKGCLPDSISFNIMIQGLLR 598
Score = 83.2 bits (204), Expect = 3e-15
Identities = 43/174 (24%), Positives = 84/174 (48%)
Frame = +3
Query: 36 PDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALEL 215
P + F+ ++ + + D ++ K+ G++P+ T +I C + +D+ L
Sbjct: 94 PAIDTFNHVLGSVSRLKCYSDVFLMYRKLNCVGIEPDLYTLNILINCCCNLNVVDYGFGL 153
Query: 216 HRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLC 395
+ K EP++V+ ++ LC G V AL LF ++ + ++ +++ TLI+G C
Sbjct: 154 FGEIAKRGFEPDVVTVGTLVKGLCNDGRVHYALQLFDKLCE-KRLGESEIIYGTLIDGFC 212
Query: 396 KSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
K + A+ + M + TY ++I+ LC+ GL E + F EM+ G
Sbjct: 213 KMHEIGRALEMHRRMVKAECKVNVLTYGMIIDALCKDGLISEAMEMFSEMIDAG 266
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/112 (32%), Positives = 61/112 (54%)
Frame = +3
Query: 51 FSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMG 230
F+ LI G+C K+ +ARK +++ G+ PN T +MI GLC+ G A EL M
Sbjct: 519 FNLLIDGMCKAGKLEEARKKLEEISSNGLVPNVSTYNSMIDGLCKKGMSLEACELLMQME 578
Query: 231 KWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLIN 386
+ C P+ +S++++I L + V A+ L E++ +P+ V + LI+
Sbjct: 579 EKGCLPDSISFNIMIQGLLREKEVQRAMQLL-EVMRKRNFLPNEAVTSMLIH 629
>XP_012481935.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X3 [Gossypium raimondii]
Length = 509
Score = 180 bits (456), Expect = 6e-51
Identities = 87/185 (47%), Positives = 126/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C+ K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 16 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 75
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VD A ++FSEMV +I PDA
Sbjct: 76 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVS-KQISPDA 134
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 135 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 194
Query: 543 MVGIG 557
MV G
Sbjct: 195 MVENG 199
Score = 120 bits (301), Expect = 1e-28
Identities = 59/184 (32%), Positives = 104/184 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 121 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 180
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 181 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 239
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 240 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 299
Query: 543 MVGI 554
M GI
Sbjct: 300 MHGI 303
Score = 110 bits (274), Expect = 7e-25
Identities = 60/181 (33%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 191 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 250
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M I P
Sbjct: 251 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKM---HGIKPTI 307
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 308 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 367
Query: 543 M 545
+
Sbjct: 368 L 368
Score = 106 bits (264), Expect = 2e-23
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 156 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 215
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 216 KEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLELDA 274
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 275 FSYNIMISGYCKSWKMDEAFELFQKM--HGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNE 332
Query: 543 M 545
M
Sbjct: 333 M 333
Score = 105 bits (261), Expect = 4e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 99 LLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 158
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 159 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 217
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 218 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 269
Score = 102 bits (253), Expect = 6e-22
Identities = 53/173 (30%), Positives = 98/173 (56%)
Frame = +3
Query: 27 GYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHA 206
G P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ A
Sbjct: 302 GIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEA 361
Query: 207 LELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLIN 386
L+L ++ N +P+I +S++ID + + G +EA +F+E + + D V +N +++
Sbjct: 362 LDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTE-ISEKGLSLDVVTYNIMLS 420
Query: 387 GLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
GLCK EA +L M +G DS ++N LI+GL R ++ + +EM
Sbjct: 421 GLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 473
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 364 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 423
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 424 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 473
>XP_012481933.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Gossypium raimondii]
Length = 529
Score = 180 bits (456), Expect = 8e-51
Identities = 87/185 (47%), Positives = 126/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C+ K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 36 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 95
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VD A ++FSEMV +I PDA
Sbjct: 96 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVS-KQISPDA 154
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 155 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 214
Query: 543 MVGIG 557
MV G
Sbjct: 215 MVENG 219
Score = 120 bits (301), Expect = 1e-28
Identities = 59/184 (32%), Positives = 104/184 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 141 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 200
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 201 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 259
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 260 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 319
Query: 543 MVGI 554
M GI
Sbjct: 320 MHGI 323
Score = 110 bits (274), Expect = 8e-25
Identities = 60/181 (33%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 211 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 270
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M I P
Sbjct: 271 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKM---HGIKPTI 327
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 328 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 387
Query: 543 M 545
+
Sbjct: 388 L 388
Score = 106 bits (264), Expect = 2e-23
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 176 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 235
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 236 KEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLELDA 294
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 295 FSYNIMISGYCKSWKMDEAFELFQKM--HGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNE 352
Query: 543 M 545
M
Sbjct: 353 M 353
Score = 105 bits (261), Expect = 5e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 119 LLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 178
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 179 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 237
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 238 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 289
Score = 102 bits (253), Expect = 6e-22
Identities = 53/173 (30%), Positives = 98/173 (56%)
Frame = +3
Query: 27 GYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHA 206
G P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ A
Sbjct: 322 GIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEA 381
Query: 207 LELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLIN 386
L+L ++ N +P+I +S++ID + + G +EA +F+E + + D V +N +++
Sbjct: 382 LDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTE-ISEKGLSLDVVTYNIMLS 440
Query: 387 GLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
GLCK EA +L M +G DS ++N LI+GL R ++ + +EM
Sbjct: 441 GLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 493
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Frame = +3
Query: 108 LFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALC 287
++ K+ G++PN T ++ C++ ++ + + K EP++V+ S+++ +C
Sbjct: 1 MYRKLNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIKRGFEPDLVTVSILLKGMC 60
Query: 288 KRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGL------------------------- 392
G V +A+ +F +M + D V++ LINGL
Sbjct: 61 VDGKVLDAVQVFDKMCE-RGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTL 119
Query: 393 ----------CKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
CK + A +F M S+ +S D+ Y LI+G C G KE + FDE
Sbjct: 120 LTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDE 179
Query: 543 MVGIG 557
MV G
Sbjct: 180 MVSRG 184
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 384 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 443
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 444 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 493
>XP_016714377.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like isoform X2 [Gossypium hirsutum]
Length = 511
Score = 179 bits (454), Expect = 1e-50
Identities = 87/185 (47%), Positives = 125/185 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 16 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 75
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VDEA ++FSEMV +I PDA
Sbjct: 76 FIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGVVDEAASVFSEMVS-KQISPDA 134
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN I+G C+ G+W E ++ F+
Sbjct: 135 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTFIHGFCQVGMWGEAVKIFNR 194
Query: 543 MVGIG 557
MV G
Sbjct: 195 MVENG 199
Score = 117 bits (292), Expect = 2e-27
Identities = 57/181 (31%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T I G C
Sbjct: 121 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTFIHGFC 180
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 181 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 239
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 240 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 299
Query: 543 M 545
M
Sbjct: 300 M 300
Score = 113 bits (283), Expect = 4e-26
Identities = 59/181 (32%), Positives = 108/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G + D +++ +I G C K+ +A +LF KM + ++P +T T+I L
Sbjct: 261 LFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKMHDNVIKPTIVTYNTLIGMLF 320
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EAL+LF + +K P
Sbjct: 321 QEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHSLESTNK-KPSI 379
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 380 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 439
Query: 543 M 545
M
Sbjct: 440 M 440
Score = 112 bits (281), Expect = 8e-26
Identities = 61/181 (33%), Positives = 103/181 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 191 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 250
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M D + I P
Sbjct: 251 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKMHD-NVIKPTI 309
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 310 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 369
Query: 543 M 545
+
Sbjct: 370 L 370
Score = 105 bits (263), Expect = 2e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 99 LLTFSMVIDAFCKDGVVDEAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 158
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 159 EMVSRGLTPDLIMYNTFIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 217
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 218 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 269
Score = 82.4 bits (202), Expect = 4e-15
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 34/185 (18%)
Frame = +3
Query: 36 PDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALEL 215
P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ AL+L
Sbjct: 307 PTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDL 366
Query: 216 HRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM--------------------- 332
++ N +P+I +S++ID + + G +EA +F+E+
Sbjct: 367 FHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCK 426
Query: 333 ----VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYT 473
++ +K+ VPD++ FNTLI+GL + + +A+ + M R SAD
Sbjct: 427 QSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEMRRRNFSADEGV 486
Query: 474 YNILI 488
++L+
Sbjct: 487 TSLLL 491
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 366 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 425
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 426 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 475
>XP_012481932.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium raimondii]
Length = 607
Score = 180 bits (456), Expect = 3e-50
Identities = 87/185 (47%), Positives = 126/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C+ K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 114 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 173
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VD A ++FSEMV +I PDA
Sbjct: 174 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVS-KQISPDA 232
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 233 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 292
Query: 543 MVGIG 557
MV G
Sbjct: 293 MVENG 297
Score = 120 bits (301), Expect = 2e-28
Identities = 59/184 (32%), Positives = 104/184 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 219 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 278
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 279 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 337
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 338 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 397
Query: 543 MVGI 554
M GI
Sbjct: 398 MHGI 401
Score = 110 bits (274), Expect = 1e-24
Identities = 60/181 (33%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 289 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 348
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M I P
Sbjct: 349 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKM---HGIKPTI 405
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 406 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 465
Query: 543 M 545
+
Sbjct: 466 L 466
Score = 106 bits (264), Expect = 2e-23
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 254 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 313
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 314 KEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLELDA 372
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 373 FSYNIMISGYCKSWKMDEAFELFQKM--HGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNE 430
Query: 543 M 545
M
Sbjct: 431 M 431
Score = 105 bits (261), Expect = 6e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 197 LLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 256
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 257 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 315
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 316 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 367
Score = 102 bits (253), Expect = 7e-22
Identities = 53/173 (30%), Positives = 98/173 (56%)
Frame = +3
Query: 27 GYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHA 206
G P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ A
Sbjct: 400 GIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEA 459
Query: 207 LELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLIN 386
L+L ++ N +P+I +S++ID + + G +EA +F+E + + D V +N +++
Sbjct: 460 LDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTE-ISEKGLSLDVVTYNIMLS 518
Query: 387 GLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
GLCK EA +L M +G DS ++N LI+GL R ++ + +EM
Sbjct: 519 GLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 571
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 462 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 521
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 522 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 571
>KJB28422.1 hypothetical protein B456_005G047000 [Gossypium raimondii]
Length = 641
Score = 180 bits (456), Expect = 4e-50
Identities = 87/185 (47%), Positives = 126/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C+ K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 148 VFGEIIKRGFEPDLVTVSILLKGMCVDGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 207
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VD A ++FSEMV +I PDA
Sbjct: 208 SIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGMVDVAASVFSEMVS-KQISPDA 266
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN LI+G C+ G+W E ++ F+
Sbjct: 267 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNR 326
Query: 543 MVGIG 557
MV G
Sbjct: 327 MVENG 331
Score = 120 bits (301), Expect = 2e-28
Identities = 59/184 (32%), Positives = 104/184 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T+I G C
Sbjct: 253 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTLIHGFC 312
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 313 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 371
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 372 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 431
Query: 543 MVGI 554
M GI
Sbjct: 432 MHGI 435
Score = 110 bits (274), Expect = 1e-24
Identities = 60/181 (33%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 323 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 382
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M I P
Sbjct: 383 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKM---HGIKPTI 439
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 440 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 499
Query: 543 M 545
+
Sbjct: 500 L 500
Score = 106 bits (264), Expect = 2e-23
Identities = 61/181 (33%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ RG PD+I +++LI G C +A K+F++M+E G+ P+ +T T+I L
Sbjct: 288 VFDEMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLG 347
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G+ A + M + +P+I +Y+ ++ LC G +DEA LF +VD + DA
Sbjct: 348 KEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVD-QGLELDA 406
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N +I+G CKS ++ EA LF M G+ TYN LI L + G + F+E
Sbjct: 407 FSYNIMISGYCKSWKMDEAFELFQKM--HGIKPTIVTYNTLIGMLFQEGQVSTAQKMFNE 464
Query: 543 M 545
M
Sbjct: 465 M 465
Score = 105 bits (261), Expect = 6e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 231 LLTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 290
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ +I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 291 EMVSRGLTPDLIMYNTLIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 349
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 350 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 401
Score = 102 bits (253), Expect = 7e-22
Identities = 53/173 (30%), Positives = 98/173 (56%)
Frame = +3
Query: 27 GYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHA 206
G P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ A
Sbjct: 434 GIKPTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEA 493
Query: 207 LELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLIN 386
L+L ++ N +P+I +S++ID + + G +EA +F+E + + D V +N +++
Sbjct: 494 LDLFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTE-ISEKGLSLDVVTYNIMLS 552
Query: 387 GLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
GLCK EA +L M +G DS ++N LI+GL R ++ + +EM
Sbjct: 553 GLCKQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 605
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Frame = +3
Query: 108 LFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALC 287
++ K+ G++PN T ++ C++ ++ + + K EP++V+ S+++ +C
Sbjct: 113 MYRKLNVEGIKPNLYTLSILMNSCCQLKQMSSGFCVFGEIIKRGFEPDLVTVSILLKGMC 172
Query: 288 KRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGL------------------------- 392
G V +A+ +F +M + D V++ LINGL
Sbjct: 173 VDGKVLDAVQVFDKMCE-RGFQGDGVIYGILINGLCSIGHPGMALELHRKMENSSCQGTL 231
Query: 393 ----------CKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
CK + A +F M S+ +S D+ Y LI+G C G KE + FDE
Sbjct: 232 LTFSMVIDAFCKDGMVDVAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDE 291
Query: 543 MVGIG 557
MV G
Sbjct: 292 MVSRG 296
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 496 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 555
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 556 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 605
>EOY05934.1 Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 644
Score = 180 bits (456), Expect = 5e-50
Identities = 88/185 (47%), Positives = 127/185 (68%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+ G I++RG++PD++ L+KGLC++ K +A ++FDK+ E G Q + T G +ITGLC
Sbjct: 142 VLGDIIRRGFEPDLVTVDRLLKGLCMEGKALEAVQVFDKINERGFQGDVFTYGILITGLC 201
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
++ E + AL+L+R M + NC +V YS+IID+LCK VDE +N+F EMV I PD
Sbjct: 202 KIHETNFALKLYRKMAERNCGGTLVIYSMIIDSLCKDRLVDEGVNMFFEMVS-KGINPDV 260
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+++LI+GLC RL EAV+ FD M RG++AD YN LI+G C+ G+WKE +R F+
Sbjct: 261 VVYSSLISGLCSLGRLKEAVKFFDEMVGRGIAADLVMYNSLIHGYCQVGMWKEAMRIFNR 320
Query: 543 MVGIG 557
MV G
Sbjct: 321 MVEEG 325
Score = 132 bits (331), Expect = 2e-32
Identities = 68/181 (37%), Positives = 106/181 (58%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI LC + K+ +A K+F M + G +PN T ++++GLC
Sbjct: 317 IFNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGKEPNLFTYNSLMSGLC 376
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
VG+LD A +L + EPN SY+++I+ CK +DEA LF EM P+A
Sbjct: 377 MVGQLDEAAKLFGMLADQGVEPNAFSYNIMINGYCKSRKIDEAFQLFQEM-HFQGCKPNA 435
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V FNTLI LC++ RL A +++ M + G S TY ++++GLC+ G E I F
Sbjct: 436 VTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLDGLCKNGHIDEAIALFHS 495
Query: 543 M 545
+
Sbjct: 496 L 496
Score = 128 bits (322), Expect = 3e-31
Identities = 63/181 (34%), Positives = 108/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ +G +PDV+ +SSLI GLC ++ +A K FD+M+ G+ + + ++I G C
Sbjct: 247 MFFEMVSKGINPDVVVYSSLISGLCSLGRLKEAVKFFDEMVGRGIAADLVMYNSLIHGYC 306
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+ + M + P++V+++ +ID LCK G V EA +F M K P+
Sbjct: 307 QVGMWKEAMRIFNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGK-EPNL 365
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC +L EA +LF ++ +GV ++++YNI+ING C+ E + F E
Sbjct: 366 FTYNSLMSGLCMVGQLDEAAKLFGMLADQGVEPNAFSYNIMINGYCKSRKIDEAFQLFQE 425
Query: 543 M 545
M
Sbjct: 426 M 426
Score = 119 bits (297), Expect = 8e-28
Identities = 61/184 (33%), Positives = 105/184 (57%)
Frame = +3
Query: 6 FGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCR 185
F ++ RG D++ ++SLI G C +A ++F++M+E G+ P+ +T T+I LC+
Sbjct: 283 FDEMVGRGIAADLVMYNSLIHGYCQVGMWKEAMRIFNRMVEEGIFPDVVTFTTLIDCLCK 342
Query: 186 VGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAV 365
G++ A ++ M + EPN+ +Y+ ++ LC G +DEA LF + D + P+A
Sbjct: 343 EGKVGEAHKIFVLMRQQGKEPNLFTYNSLMSGLCMVGQLDEAAKLFGMLADQG-VEPNAF 401
Query: 366 VFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
+N +ING CKS ++ EA +LF M +G ++ T+N LI LC+ G + + + EM
Sbjct: 402 SYNIMINGYCKSRKIDEAFQLFQEMHFQGCKPNAVTFNTLIGALCQAGRLRTAEKMYHEM 461
Query: 546 VGIG 557
G
Sbjct: 462 HACG 465
Score = 112 bits (279), Expect = 2e-25
Identities = 59/181 (32%), Positives = 100/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + +G P+ + F++LI LC ++ A K++ +M G P T M+ GLC
Sbjct: 422 LFQEMHFQGCKPNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLDGLC 481
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G +D A+ L ++G + +I S++ID +C+ G ++EA+N+F+E + +VPD
Sbjct: 482 KNGHIDEAIALFHSLGSTKYKSSIELCSILIDGMCRTGRLEEAMNMFNE-IPKKGLVPDV 540
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +N +INGLCK L EA +L M +G +S ++NI+I G + + + E
Sbjct: 541 VTYNIMINGLCKKGMLLEADKLLIDMEEKGCLPNSISFNIIIQGCLQENNIHKAMNLLGE 600
Query: 543 M 545
M
Sbjct: 601 M 601
Score = 74.7 bits (182), Expect = 2e-12
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 72/241 (29%)
Frame = +3
Query: 51 FSSLIKGLCLQEKI--YDARKLFDKMIE-------------------------------- 128
F I+ C KI YDA F+K+I+
Sbjct: 51 FEYYIRHQCKSGKINLYDALSYFEKLIKVKPFPFVDTFNHVLSSVLKLRCNSDVISMYRE 110
Query: 129 ---WGVQPNTITCGTMIT-----------------------------------GLCRVGE 194
G++PN T ++T GLC G+
Sbjct: 111 LNYRGIKPNLCTLNILLTSCCHLRQINFGFCVLGDIIRRGFEPDLVTVDRLLKGLCMEGK 170
Query: 195 LDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFN 374
A+++ + + + ++ +Y ++I LCK + AL L+ +M + V+++
Sbjct: 171 ALEAVQVFDKINERGFQGDVFTYGILITGLCKIHETNFALKLYRKMAE-RNCGGTLVIYS 229
Query: 375 TLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGI 554
+I+ LCK + E V +F M S+G++ D Y+ LI+GLC G KE +++FDEMVG
Sbjct: 230 MIIDSLCKDRLVDEGVNMFFEMVSKGINPDVVVYSSLISGLCSLGRLKEAVKFFDEMVGR 289
Query: 555 G 557
G
Sbjct: 290 G 290
>XP_016714376.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Gossypium hirsutum]
Length = 643
Score = 179 bits (454), Expect = 9e-50
Identities = 87/185 (47%), Positives = 125/185 (67%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+FG I+KRG++PD++ S L+KG+C K+ DA ++FDKM E G Q + + G +I GLC
Sbjct: 148 VFGEIIKRGFEPDLVTVSILLKGMCADGKVLDAVQVFDKMCERGFQGDGVIYGILINGLC 207
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+G ALELHR M +C+ ++++S++IDA CK G VDEA ++FSEMV +I PDA
Sbjct: 208 FIGHPGMALELHRKMENSSCQGTLLTFSMVIDAFCKDGVVDEAASVFSEMVS-KQISPDA 266
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI+G C RL EAV +FD M SRG++ D YN I+G C+ G+W E ++ F+
Sbjct: 267 VVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTFIHGFCQVGMWGEAVKIFNR 326
Query: 543 MVGIG 557
MV G
Sbjct: 327 MVENG 331
Score = 117 bits (292), Expect = 4e-27
Identities = 57/181 (31%), Positives = 101/181 (55%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ + PD + + SLI G C ++ +A +FD+M+ G+ P+ I T I G C
Sbjct: 253 VFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFDEMVSRGLTPDLIMYNTFIHGFC 312
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+VG A+++ M + P++V+++ +ID+L K G EA +F M+ PD
Sbjct: 313 QVGMWGEAVKIFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIR-QGAKPDI 371
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC + L EA +LF + +G+ D+++YNI+I+G C+ E F +
Sbjct: 372 RTYNSLLSGLCSNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQK 431
Query: 543 M 545
M
Sbjct: 432 M 432
Score = 113 bits (283), Expect = 7e-26
Identities = 59/181 (32%), Positives = 108/181 (59%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG I+ +G + D +++ +I G C K+ +A +LF KM + ++P +T T+I L
Sbjct: 393 LFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKMHDNVIKPTIVTYNTLIGMLF 452
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G++ A ++ M + P + +Y+V++D LCK G ++EAL+LF + +K P
Sbjct: 453 QEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHSLESTNK-KPSI 511
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
F+ LI+G+ ++ + EA ++F +S +G+S D TYNI+++GLC++ + E + E
Sbjct: 512 EHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCKQSMSLEANKLLME 571
Query: 543 M 545
M
Sbjct: 572 M 572
Score = 112 bits (281), Expect = 1e-25
Identities = 61/181 (33%), Positives = 103/181 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +++ G PDV+ F++LI L + K +A+++FD MI G +P+ T ++++GLC
Sbjct: 323 IFNRMVENGISPDVVTFTTLIDSLGKEGKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLC 382
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G LD A +L + E + SY+++I CK +DEA LF +M D + I P
Sbjct: 383 SNGHLDEATKLFGLIVDQGLELDAFSYNIMISGYCKSWKMDEAFELFQKMHD-NVIKPTI 441
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V +NTLI L + ++S A ++F+ M G S TY ++++GLC+ G +E + F
Sbjct: 442 VTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDLFHS 501
Query: 543 M 545
+
Sbjct: 502 L 502
Score = 105 bits (263), Expect = 3e-23
Identities = 56/172 (32%), Positives = 90/172 (52%)
Frame = +3
Query: 42 VIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHR 221
++ FS +I C + +A +F +M+ + P+ + G++I G C +G L A+ +
Sbjct: 231 LLTFSMVIDAFCKDGVVDEAASVFSEMVSKQISPDAVVYGSLIHGFCGLGRLKEAVNVFD 290
Query: 222 NMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNTLINGLCKS 401
M P+++ Y+ I C+ G EA+ +F+ MV+ + I PD V F TLI+ L K
Sbjct: 291 EMVSRGLTPDLIMYNTFIHGFCQVGMWGEAVKIFNRMVE-NGISPDVVTFTTLIDSLGKE 349
Query: 402 DRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
+ EA R+FD M +G D TYN L++GLC G E + F +V G
Sbjct: 350 GKTGEAQRIFDLMIRQGAKPDIRTYNSLLSGLCSNGHLDEATKLFGLIVDQG 401
Score = 82.4 bits (202), Expect = 5e-15
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 34/185 (18%)
Frame = +3
Query: 36 PDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALEL 215
P ++ +++LI L + ++ A+K+F++M +G P T M+ GLC+ G ++ AL+L
Sbjct: 439 PTIVTYNTLIGMLFQEGQVSTAQKMFNEMHVYGQSPALSTYTVMLDGLCKHGHIEEALDL 498
Query: 216 HRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM--------------------- 332
++ N +P+I +S++ID + + G +EA +F+E+
Sbjct: 499 FHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLCK 558
Query: 333 ----VDVSKI---------VPDAVVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYT 473
++ +K+ VPD++ FNTLI+GL + + +A+ + M R SAD
Sbjct: 559 QSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEMRRRNFSADEGV 618
Query: 474 YNILI 488
++L+
Sbjct: 619 TSLLL 623
Score = 58.9 bits (141), Expect = 6e-07
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + P + FS LI G+ K +ARK+F ++ E G+ + +T M++GLC
Sbjct: 498 LFHSLESTNKKPSIEHFSILIDGMWRAGKSEEARKMFTEISEKGLSLDVVTYNIMLSGLC 557
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEM 332
+ A +L M + C P+ +S++ +I L + V++A+N EM
Sbjct: 558 KQSMSLEANKLLMEMEEKGCVPDSISFNTLIHGLLREKEVEKAMNRLEEM 607
>GAV69615.1 PPR_1 domain-containing protein/PPR_2 domain-containing protein
[Cephalotus follicularis]
Length = 559
Score = 177 bits (448), Expect = 2e-49
Identities = 86/182 (47%), Positives = 121/182 (66%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LFG ++KRG++PD++ S+L+K LC+ K+ DA ++FDK+ E G Q + G +I LC
Sbjct: 36 LFGEVIKRGFEPDIVTISTLVKCLCVDGKVVDAVQMFDKICERGFQGDVFIYGFLIYRLC 95
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
++ E A+ELHR M + NC PN+ +YS+IIDALCK +D A ++F EM+ I PD
Sbjct: 96 KISETASAIELHRRMMERNCVPNVHTYSMIIDALCKDRLMDAAEDMFLEMIS-KGIFPDV 154
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+ +LI GLC RL AV+ FD M RG+ AD TYN LI+G C+ GLWK+ R F+
Sbjct: 155 VVYGSLITGLCCLGRLKVAVKYFDEMVGRGIKADIVTYNTLIHGFCQAGLWKDATRIFNR 214
Query: 543 MV 548
M+
Sbjct: 215 ML 216
Score = 132 bits (333), Expect = 6e-33
Identities = 69/181 (38%), Positives = 109/181 (60%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++ RG + V++++ LI G C K +A +LF++M G++P T+T GT+I +
Sbjct: 281 LFKLMVDRGIEVSVVSYNILINGYCKSWKTDEAIELFEEMCSKGLKPTTVTYGTLIGAIF 340
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G + A EL M + P + +Y+V++D LCK G ++EALNLF + D K P
Sbjct: 341 HAGRVKTAQELFNKMHICSQMPELSTYTVMLDGLCKNGLIEEALNLFKSLKD--KYEPCV 398
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V+++ LI+G+C RL EA FD + +G+ D TYNI+INGLC++G+ E + F +
Sbjct: 399 VMYSALIHGMCSVGRLEEAREKFDEILKKGLVPDVVTYNIMINGLCKKGMLLEADKLFMQ 458
Query: 543 M 545
M
Sbjct: 459 M 459
Score = 128 bits (321), Expect = 3e-31
Identities = 65/185 (35%), Positives = 105/185 (56%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ +G PDV+ + SLI GLC ++ A K FD+M+ G++ + +T T+I G C
Sbjct: 141 MFLEMISKGIFPDVVVYGSLITGLCCLGRLKVAVKYFDEMVGRGIKADIVTYNTLIHGFC 200
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G A + M + P++++Y+++ID L K G + EA + M+ K P+
Sbjct: 201 QAGLWKDATRIFNRMLEGRIFPDVITYTILIDCLFKGGKMGEASRILEVMIKQGK-APNL 259
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L+NGLC + +L +AV+LF M RG+ +YNILING C+ E I F+E
Sbjct: 260 FTYNSLLNGLCLAGQLDDAVKLFKLMVDRGIEVSVVSYNILINGYCKSWKTDEAIELFEE 319
Query: 543 MVGIG 557
M G
Sbjct: 320 MCSKG 324
Score = 109 bits (272), Expect = 2e-24
Identities = 59/181 (32%), Positives = 99/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F +L+ PDVI ++ LI L K+ +A ++ + MI+ G PN T +++ GLC
Sbjct: 211 IFNRMLEGRIFPDVITYTILIDCLFKGGKMGEASRILEVMIKQGKAPNLFTYNSLLNGLC 270
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
G+LD A++L + M E ++VSY+++I+ CK DEA+ LF EM + P
Sbjct: 271 LAGQLDDAVKLFKLMVDRGIEVSVVSYNILINGYCKSWKTDEAIELFEEMCS-KGLKPTT 329
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
V + TLI + + R+ A LF+ M + TY ++++GLC+ GL +E + F
Sbjct: 330 VTYGTLIGAIFHAGRVKTAQELFNKMHICSQMPELSTYTVMLDGLCKNGLIEEALNLFKS 389
Query: 543 M 545
+
Sbjct: 390 L 390
Score = 107 bits (266), Expect = 1e-23
Identities = 57/181 (31%), Positives = 101/181 (55%)
Frame = +3
Query: 15 ILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGE 194
+++R P+V +S +I LC + A +F +MI G+ P+ + G++ITGLC +G
Sbjct: 110 MMERNCVPNVHTYSMIIDALCKDRLMDAAEDMFLEMISKGIFPDVVVYGSLITGLCCLGR 169
Query: 195 LDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFN 374
L A++ M + +IV+Y+ +I C+ G +A +F+ M++ +I PD + +
Sbjct: 170 LKVAVKYFDEMVGRGIKADIVTYNTLIHGFCQAGLWKDATRIFNRMLE-GRIFPDVITYT 228
Query: 375 TLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGI 554
LI+ L K ++ EA R+ + M +G + + +TYN L+NGLC G + ++ F MV
Sbjct: 229 ILIDCLFKGGKMGEASRILEVMIKQGKAPNLFTYNSLLNGLCLAGQLDDAVKLFKLMVDR 288
Query: 555 G 557
G
Sbjct: 289 G 289
Score = 105 bits (262), Expect = 4e-23
Identities = 57/181 (31%), Positives = 102/181 (56%)
Frame = +3
Query: 15 ILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGE 194
++K+G P++ ++SL+ GLCL ++ DA KLF M++ G++ + ++ +I G C+ +
Sbjct: 250 MIKQGKAPNLFTYNSLLNGLCLAGQLDDAVKLFKLMVDRGIEVSVVSYNILINGYCKSWK 309
Query: 195 LDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFN 374
D A+EL M +P V+Y +I A+ G V A LF++M S++ P+ +
Sbjct: 310 TDEAIELFEEMCSKGLKPTTVTYGTLIGAIFHAGRVKTAQELFNKMHICSQM-PELSTYT 368
Query: 375 TLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGI 554
+++GLCK+ + EA+ LF S+ + Y+ LI+G+C G +E FDE++
Sbjct: 369 VMLDGLCKNGLIEEALNLFKSLKDK-YEPCVVMYSALIHGMCSVGRLEEAREKFDEILKK 427
Query: 555 G 557
G
Sbjct: 428 G 428
Score = 79.0 bits (193), Expect = 7e-14
Identities = 45/134 (33%), Positives = 76/134 (56%)
Frame = +3
Query: 18 LKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGEL 197
LK Y+P V+ +S+LI G+C ++ +AR+ FD++++ G+ P+ +T MI GLC+ G L
Sbjct: 390 LKDKYEPCVVMYSALIHGMCSVGRLEEAREKFDEILKKGLVPDVVTYNIMINGLCKKGML 449
Query: 198 DHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFNT 377
A +L M + C P+ +S+++II K V +A+ +M ++P+ VV T
Sbjct: 450 LEADKLFMQMEENGCLPDAISFNIIIQGFLKEKEVHKAMQFLKKMRQ-RNLIPNEVV-TT 507
Query: 378 LINGLCKSDRLSEA 419
L+ L D S A
Sbjct: 508 LLIELIMDDAQSRA 521
Score = 74.7 bits (182), Expect = 2e-12
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 34/176 (19%)
Frame = +3
Query: 132 GVQPNTITCGTMITGLCRVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEA 311
G++P+ T +I C++ +++ L + K EP+IV+ S ++ LC G V +A
Sbjct: 9 GIKPDLFTLNILINCCCQLRKMNRGFGLFGEVIKRGFEPDIVTISTLVKCLCVDGKVVDA 68
Query: 312 LNLFSEMVD----------------VSKI------------------VPDAVVFNTLING 389
+ +F ++ + + KI VP+ ++ +I+
Sbjct: 69 VQMFDKICERGFQGDVFIYGFLIYRLCKISETASAIELHRRMMERNCVPNVHTYSMIIDA 128
Query: 390 LCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGIG 557
LCK + A +F M S+G+ D Y LI GLC G K ++YFDEMVG G
Sbjct: 129 LCKDRLMDAAEDMFLEMISKGIFPDVVVYGSLITGLCCLGRLKVAVKYFDEMVGRG 184
Score = 58.5 bits (140), Expect = 8e-07
Identities = 35/117 (29%), Positives = 62/117 (52%)
Frame = +3
Query: 6 FGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCR 185
F ILK+G PDV+ ++ +I GLC + + +A KLF +M E G P+ I+ +I G +
Sbjct: 421 FDEILKKGLVPDVVTYNIMINGLCKKGMLLEADKLFMQMEENGCLPDAISFNIIIQGFLK 480
Query: 186 VGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVP 356
E+ A++ + M + N PN V +++I+ + L+ + V K++P
Sbjct: 481 EKEVHKAMQFLKKMRQRNLIPNEVVTTLLIELIMDDAQSRATLDSLPD-VPPQKLIP 536
>XP_016715162.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like isoform X1 [Gossypium hirsutum]
Length = 638
Score = 177 bits (449), Expect = 4e-49
Identities = 92/185 (49%), Positives = 117/185 (63%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+ G I KRG++PD L+KGLC++ + +A ++FDKM E G Q + T G +I GLC
Sbjct: 130 VLGDIFKRGFEPDYATVGRLLKGLCVEGQGLEAVQVFDKMRERGFQGDVFTYGILIYGLC 189
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+GE AL L R M K NCE + Y II +LCK VDE LNLF EMV I PD
Sbjct: 190 SIGESCPALNLFRKMAKTNCEGYLRIYGTIIGSLCKNKLVDEGLNLFFEMVS-KGITPDV 248
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
VV+++L++GLC RL EAV+ FD M RG++AD YN LI+G R G+WKE IR FD
Sbjct: 249 VVYSSLVSGLCSLGRLKEAVKFFDEMIDRGIAADLIMYNSLIHGFSREGMWKEAIRIFDR 308
Query: 543 MVGIG 557
MVG G
Sbjct: 309 MVGEG 313
Score = 119 bits (297), Expect = 8e-28
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF I +GY+ +VI+++ +I G C +KI + + F M G +PN T T+I LC
Sbjct: 375 LFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALC 434
Query: 183 RVGELDHALELHRNMGKWNCE-PNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPD 359
RVG + A ++ M + P +Y++++D LCK G VDEA+ LF + +++K
Sbjct: 435 RVGRVRTAKKMFNEMYVCGSQSPTSFTYTIMLDGLCKNGHVDEAIALFRSL-EITKYESS 493
Query: 360 AVVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFD 539
+++ LI G+C++ R+ EA +F+ MS +G D TYNILI+GL ++G+ E +
Sbjct: 494 IELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILIDGLRKKGMLLEANKLIV 553
Query: 540 EM 545
EM
Sbjct: 554 EM 555
Score = 115 bits (289), Expect = 1e-26
Identities = 59/181 (32%), Positives = 105/181 (58%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++ +G PDV+ +SSL+ GLC ++ +A K FD+MI+ G+ + I ++I G
Sbjct: 235 LFFEMVSKGITPDVVVYSSLVSGLCSLGRLKEAVKFFDEMIDRGIAADLIMYNSLIHGFS 294
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
R G A+ + M P+ ++++ +I LCK+G V +A +F+ M ++ P
Sbjct: 295 REGMWKEAIRIFDRMVGEGISPDEITFTTLISCLCKKGMVVKAHEMFAFMRQ-KEMKPTL 353
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC++ +L EA +LF S+ +G + +YNI+ING C+ E ++F +
Sbjct: 354 FTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRD 413
Query: 543 M 545
M
Sbjct: 414 M 414
Score = 115 bits (288), Expect = 1e-26
Identities = 62/184 (33%), Positives = 103/184 (55%)
Frame = +3
Query: 6 FGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCR 185
F ++ RG D+I ++SLI G + +A ++FD+M+ G+ P+ IT T+I+ LC+
Sbjct: 271 FDEMIDRGIAADLIMYNSLIHGFSREGMWKEAIRIFDRMVGEGISPDEITFTTLISCLCK 330
Query: 186 VGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAV 365
G + A E+ M + +P + +Y+ ++D LC+ G +DEA LF + D V + +
Sbjct: 331 KGMVVKAHEMFAFMRQKEMKPTLFTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEV-NVI 389
Query: 366 VFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
+N +ING CKS ++ E + F M +G ++ TYN LI LCR G + + F+EM
Sbjct: 390 SYNIMINGYCKSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALCRVGRVRTAKKMFNEM 449
Query: 546 VGIG 557
G
Sbjct: 450 YVCG 453
Score = 114 bits (285), Expect = 3e-26
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ G PD I F++LI LC + + A ++F M + ++P T +++ GLC
Sbjct: 305 IFDRMVGEGISPDEITFTTLISCLCKKGMVVKAHEMFAFMRQKEMKPTLFTYNSLMDGLC 364
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
R G+LD A +L R++ E N++SY+++I+ CK +DE F +M P+A
Sbjct: 365 RAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRDM-QFQGCKPNA 423
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRG-VSADSYTYNILINGLCRRGLWKETIRYF 536
+NTLI LC+ R+ A ++F+ M G S S+TY I+++GLC+ G E I F
Sbjct: 424 RTYNTLIQALCRVGRVRTAKKMFNEMYVCGSQSPTSFTYTIMLDGLCKNGHVDEAIALF 482
Score = 112 bits (281), Expect = 1e-25
Identities = 57/181 (31%), Positives = 98/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F + ++ P + ++SL+ GLC ++ +A KLF + + G + N I+ MI G C
Sbjct: 340 MFAFMRQKEMKPTLFTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYC 399
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ ++D + R+M C+PN +Y+ +I ALC+ G V A +F+EM P +
Sbjct: 400 KSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALCRVGRVRTAKKMFNEMYVCGSQSPTS 459
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+ +++GLCK+ + EA+ LF S+ + Y+ILI G+CR G +E F+E
Sbjct: 460 FTYTIMLDGLCKNGHVDEAIALFRSLEITKYESSIELYSILIYGMCRTGRMEEARNMFNE 519
Query: 543 M 545
M
Sbjct: 520 M 520
Score = 67.4 bits (163), Expect = 8e-10
Identities = 39/128 (30%), Positives = 67/128 (52%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + Y+ + +S LI G+C ++ +AR +F++M G P+ +T +I GL
Sbjct: 481 LFRSLEITKYESSIELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILIDGLR 540
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G L A +L M + C PN +S+++II + ++ EA+NL EM P+
Sbjct: 541 KKGMLLEANKLIVEMEEKGCLPNSISFNIIIQGFLRENNIPEAMNLLKEM-RRRNFAPNE 599
Query: 363 VVFNTLIN 386
V + L+N
Sbjct: 600 AVTSLLLN 607
Score = 65.9 bits (159), Expect = 3e-09
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Frame = +3
Query: 51 FSSLIKGLCLQEKIY--DARKLFDKMIEWGVQPNTITCGTMITGLCRVGELDHALELHRN 224
F I+ C KI DA DK+I+ P+T T ++ + ++ + + L+R
Sbjct: 39 FEFHIRHQCKSGKINLNDALGYIDKLIKVKPFPSTDTFNHVLGSVLKLSRDTNVISLYRK 98
Query: 225 MGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSK--IVPDAVVFNTLINGLCK 398
+ +PN+ + ++++ + +D F + D+ K PD L+ GLC
Sbjct: 99 LSYEGIKPNLCTLNILLSSYYHLRRIDFG---FCVLGDIFKRGFEPDYATVGRLLKGLCV 155
Query: 399 SDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
+ EAV++FD M RG D +TY ILI GLC G + F +M
Sbjct: 156 EGQGLEAVQVFDKMRERGFQGDVFTYGILIYGLCSIGESCPALNLFRKM 204
>XP_017608907.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g12620-like [Gossypium arboreum]
Length = 568
Score = 175 bits (443), Expect = 1e-48
Identities = 90/181 (49%), Positives = 116/181 (64%)
Frame = +3
Query: 15 ILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCRVGE 194
++KRG++PD L+KGLC++ + +A ++FDKM E G Q + T G +I GLC +GE
Sbjct: 64 LIKRGFEPDYATVGRLLKGLCVEGQGLEAVQVFDKMRERGFQGDVFTYGILIYGLCSIGE 123
Query: 195 LDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAVVFN 374
AL L R M K NCE + Y II +LCK VDE LNLF EMV I PD VV++
Sbjct: 124 SCPALNLFRKMAKTNCEGYLRIYGTIIGSLCKNKLVDEGLNLFFEMVS-KGITPDVVVYS 182
Query: 375 TLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEMVGI 554
+L++GLC RL EAV+ FD M RG++AD YN LI+G R G+WKE IR FD MVG
Sbjct: 183 SLVSGLCSLGRLKEAVKFFDEMIDRGIAADLIMYNSLIHGFSREGMWKEAIRIFDRMVGE 242
Query: 555 G 557
G
Sbjct: 243 G 243
Score = 119 bits (297), Expect = 6e-28
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF I +GY+ +VI+++ +I G C +KI + + F M G +PN T T+I LC
Sbjct: 305 LFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALC 364
Query: 183 RVGELDHALELHRNMGKWNCE-PNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPD 359
RVG + A ++ M + P +Y++++D LCK G VDEA+ LF + +++K
Sbjct: 365 RVGRVRTAKKMFNEMYVCGSQSPTSFTYTIMLDGLCKNGHVDEAIALFRSL-EITKYESS 423
Query: 360 AVVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFD 539
+++ LI G+C++ R+ EA +F+ MS +G D TYNILI+GL ++G+ E +
Sbjct: 424 IELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILIDGLRKKGMLLEANKLIV 483
Query: 540 EM 545
EM
Sbjct: 484 EM 485
Score = 115 bits (289), Expect = 8e-27
Identities = 59/181 (32%), Positives = 105/181 (58%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF ++ +G PDV+ +SSL+ GLC ++ +A K FD+MI+ G+ + I ++I G
Sbjct: 165 LFFEMVSKGITPDVVVYSSLVSGLCSLGRLKEAVKFFDEMIDRGIAADLIMYNSLIHGFS 224
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
R G A+ + M P+ ++++ +I LCK+G V +A +F+ M ++ P
Sbjct: 225 REGMWKEAIRIFDRMVGEGISPDEITFTTLISCLCKKGMVVKAHEMFAFMRQ-KEMKPTL 283
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+N+L++GLC++ +L EA +LF S+ +G + +YNI+ING C+ E ++F +
Sbjct: 284 FTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRD 343
Query: 543 M 545
M
Sbjct: 344 M 344
Score = 115 bits (288), Expect = 1e-26
Identities = 62/184 (33%), Positives = 103/184 (55%)
Frame = +3
Query: 6 FGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLCR 185
F ++ RG D+I ++SLI G + +A ++FD+M+ G+ P+ IT T+I+ LC+
Sbjct: 201 FDEMIDRGIAADLIMYNSLIHGFSREGMWKEAIRIFDRMVGEGISPDEITFTTLISCLCK 260
Query: 186 VGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDAV 365
G + A E+ M + +P + +Y+ ++D LC+ G +DEA LF + D V + +
Sbjct: 261 KGMVVKAHEMFAFMRQKEMKPTLFTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEV-NVI 319
Query: 366 VFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDEM 545
+N +ING CKS ++ E + F M +G ++ TYN LI LCR G + + F+EM
Sbjct: 320 SYNIMINGYCKSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALCRVGRVRTAKKMFNEM 379
Query: 546 VGIG 557
G
Sbjct: 380 YVCG 383
Score = 114 bits (285), Expect = 3e-26
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F ++ G PD I F++LI LC + + A ++F M + ++P T +++ GLC
Sbjct: 235 IFDRMVGEGISPDEITFTTLISCLCKKGMVVKAHEMFAFMRQKEMKPTLFTYNSLMDGLC 294
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
R G+LD A +L R++ E N++SY+++I+ CK +DE F +M P+A
Sbjct: 295 RAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYCKSQKIDEGFQFFRDM-QFQGCKPNA 353
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRG-VSADSYTYNILINGLCRRGLWKETIRYF 536
+NTLI LC+ R+ A ++F+ M G S S+TY I+++GLC+ G E I F
Sbjct: 354 RTYNTLIQALCRVGRVRTAKKMFNEMYVCGSQSPTSFTYTIMLDGLCKNGHVDEAIALF 412
Score = 112 bits (281), Expect = 1e-25
Identities = 57/181 (31%), Positives = 98/181 (54%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
+F + ++ P + ++SL+ GLC ++ +A KLF + + G + N I+ MI G C
Sbjct: 270 MFAFMRQKEMKPTLFTYNSLMDGLCRAGQLDEAAKLFRSIPDQGYEVNVISYNIMINGYC 329
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ ++D + R+M C+PN +Y+ +I ALC+ G V A +F+EM P +
Sbjct: 330 KSQKIDEGFQFFRDMQFQGCKPNARTYNTLIQALCRVGRVRTAKKMFNEMYVCGSQSPTS 389
Query: 363 VVFNTLINGLCKSDRLSEAVRLFDSMSSRGVSADSYTYNILINGLCRRGLWKETIRYFDE 542
+ +++GLCK+ + EA+ LF S+ + Y+ILI G+CR G +E F+E
Sbjct: 390 FTYTIMLDGLCKNGHVDEAIALFRSLEITKYESSIELYSILIYGMCRTGRMEEARNMFNE 449
Query: 543 M 545
M
Sbjct: 450 M 450
Score = 67.4 bits (163), Expect = 7e-10
Identities = 39/128 (30%), Positives = 67/128 (52%)
Frame = +3
Query: 3 LFGGILKRGYDPDVIAFSSLIKGLCLQEKIYDARKLFDKMIEWGVQPNTITCGTMITGLC 182
LF + Y+ + +S LI G+C ++ +AR +F++M G P+ +T +I GL
Sbjct: 411 LFRSLEITKYESSIELYSILIYGMCRTGRMEEARNMFNEMSRKGFVPDVVTYNILIDGLR 470
Query: 183 RVGELDHALELHRNMGKWNCEPNIVSYSVIIDALCKRGSVDEALNLFSEMVDVSKIVPDA 362
+ G L A +L M + C PN +S+++II + ++ EA+NL EM P+
Sbjct: 471 KKGMLLEANKLIVEMEEKGCLPNSISFNIIIQGFLRENNIPEAMNLLKEM-RRRNFAPNE 529
Query: 363 VVFNTLIN 386
V + L+N
Sbjct: 530 AVTSLLLN 537