BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver32_contig00026538
         (430 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABA94311.1 retrotransposon protein, putative, Ty1-copia subclass...    39   9e-06

>ABA94311.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 39.3 bits (90), Expect(2) = 9e-06
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +1

Query: 13  YLAHANQLADSLASAGQPISDMELRHILLDGIDSSFETIYASLQTSMD 156
           Y +    LAD LASAG+PI D EL   +L G+D  +  + +++  S D
Sbjct: 146 YFSKMKGLADDLASAGKPIDDDELVSYILAGLDIDYNPLVSTVMVSYD 193



 Score = 37.4 bits (85), Expect(2) = 9e-06
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
 Frame = +3

Query: 189 LSYERRVEK-QNQSLVQPQANAA---RSNPNR-------GKXXXXXXXXXXXXXXXXXVC 335
           +SY+ R++  Q    +Q  ANAA   R N N        G                  VC
Sbjct: 190 VSYDNRMDHLQGGGQIQSSANAAFRGRGNNNNNFRGRGNGGCGRGNGGRGGGQQGPRPVC 249

Query: 336 QLCDKPYHIYPECWKHFDRNFKPPPK 413
           QLC K  H   +CW  FD+ ++P  K
Sbjct: 250 QLCGKTGHTVIKCWYRFDQTYQPEEK 275