BLASTX nr result
ID: Papaver32_contig00017304
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver32_contig00017304
(1612 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KRY02392.1 40S ribosomal protein S3-3, partial [Trichinella pata... 56 2e-06
JAU80550.1 40S ribosomal protein S3-3, partial [Noccaea caerules... 56 2e-06
JAU37790.1 40S ribosomal protein S3-3, partial [Noccaea caerules... 55 4e-06
JAU93702.1 putative mediator of RNA polymerase II transcription ... 55 5e-06
XP_010463509.1 PREDICTED: 40S ribosomal protein S3-1-like [Camel... 56 5e-06
ACN27873.1 unknown [Zea mays] 56 5e-06
NP_001142180.1 uncharacterized LOC100274348 [Zea mays] ACF87834.... 56 5e-06
ACN25274.1 unknown [Zea mays] 56 7e-06
ALT31541.1 mediator of RNA polymerase II transcription subunit 3... 56 8e-06
JAU48647.1 40S ribosomal protein S3-3, partial [Noccaea caerules... 55 8e-06
XP_006376836.1 hypothetical protein POPTR_0012s07830g [Populus t... 56 8e-06
ACS68715.1 40S RPS3B, partial [Sonneratia alba] ACS68786.1 RPS3B... 56 9e-06
JAU73940.1 40S ribosomal protein S3-1, partial [Noccaea caerules... 54 9e-06
JAT43106.1 40S ribosomal protein S3-1, partial [Anthurium amnicola] 55 9e-06
WP_071414579.1 30S ribosomal protein S3, partial [Acinetobacter ... 56 1e-05
XP_011028621.1 PREDICTED: 40S ribosomal protein S3-1-like [Popul... 56 1e-05
>KRY02392.1 40S ribosomal protein S3-3, partial [Trichinella patagoniensis]
Length = 82
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>JAU80550.1 40S ribosomal protein S3-3, partial [Noccaea caerulescens]
Length = 86
Score = 56.2 bits (134), Expect = 2e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>JAU37790.1 40S ribosomal protein S3-3, partial [Noccaea caerulescens]
Length = 83
Score = 55.1 bits (131), Expect = 4e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
+RTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 10 LRTEIIIRATRTQNVLGEKGRRIRELTS 37
>JAU93702.1 putative mediator of RNA polymerase II transcription subunit 36b,
partial [Noccaea caerulescens]
Length = 88
Score = 55.1 bits (131), Expect = 5e-06
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +1
Query: 490 KLAAAILGGVDNIWIVPGARVLYLGAAMRTEIIIRATRTQNVLGEKG 630
KLAAAILGGVDNIWI PGA+VLYLGAA T + + +++G +G
Sbjct: 27 KLAAAILGGVDNIWIKPGAKVLYLGAASGTTV----SHVSDLVGPEG 69
>XP_010463509.1 PREDICTED: 40S ribosomal protein S3-1-like [Camelina sativa]
Length = 127
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>ACN27873.1 unknown [Zea mays]
Length = 127
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>NP_001142180.1 uncharacterized LOC100274348 [Zea mays] ACF87834.1 unknown [Zea
mays] AQK50673.1 40S ribosomal protein S3-1 [Zea mays]
Length = 133
Score = 56.2 bits (134), Expect = 5e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>ACN25274.1 unknown [Zea mays]
Length = 148
Score = 56.2 bits (134), Expect = 7e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>ALT31541.1 mediator of RNA polymerase II transcription subunit 36-like
protein, partial [Rehmannia glutinosa]
Length = 136
Score = 55.8 bits (133), Expect = 8e-06
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = +1
Query: 490 KLAAAILGGVDNIWIVPGARVLYLGAAMRTEIIIRATRTQNVLGEKG 630
KLAAA+LGGVDNIWI PGARVLYLGAA T + + +++G G
Sbjct: 65 KLAAAVLGGVDNIWIKPGARVLYLGAASGTTV----SHVSDIVGPDG 107
>JAU48647.1 40S ribosomal protein S3-3, partial [Noccaea caerulescens]
Length = 110
Score = 55.1 bits (131), Expect = 8e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
+RTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 48 LRTEIIIRATRTQNVLGEKGRRIRELTS 75
>XP_006376836.1 hypothetical protein POPTR_0012s07830g [Populus trichocarpa]
ERP54633.1 hypothetical protein POPTR_0012s07830g
[Populus trichocarpa]
Length = 152
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71
>ACS68715.1 40S RPS3B, partial [Sonneratia alba] ACS68786.1 RPS3B, partial
[Sonneratia alba]
Length = 156
Score = 56.2 bits (134), Expect = 9e-06
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 1 MRTEIIIRATRTQNVLGEKGRRIRELTS 28
>JAU73940.1 40S ribosomal protein S3-1, partial [Noccaea caerulescens]
Length = 89
Score = 54.3 bits (129), Expect = 9e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQ+VLGEKGRRIRELTS
Sbjct: 52 MRTEIIIRATRTQSVLGEKGRRIRELTS 79
>JAT43106.1 40S ribosomal protein S3-1, partial [Anthurium amnicola]
Length = 115
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGE+GRRIRELTS
Sbjct: 43 MRTEIIIRATRTQNVLGERGRRIRELTS 70
>WP_071414579.1 30S ribosomal protein S3, partial [Acinetobacter baumannii]
OIC49093.1 30S ribosomal protein S3, partial
[Acinetobacter baumannii]
Length = 164
Score = 56.2 bits (134), Expect = 1e-05
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 21 MRTEIIIRATRTQNVLGEKGRRIRELTS 48
>XP_011028621.1 PREDICTED: 40S ribosomal protein S3-1-like [Populus euphratica]
Length = 164
Score = 56.2 bits (134), Expect = 1e-05
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 571 MRTEIIIRATRTQNVLGEKGRRIRELTS 654
MRTEIIIRATRTQNVLGEKGRRIRELTS
Sbjct: 44 MRTEIIIRATRTQNVLGEKGRRIRELTS 71