BLASTX nr result
ID: Papaver31_contig00057404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00057404
(477 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polyme... 65 3e-08
ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polyme... 65 3e-08
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 57 7e-06
ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polyme... 56 9e-06
ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polyme... 56 9e-06
gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sin... 56 9e-06
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 56 9e-06
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 56 9e-06
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ... 56 9e-06
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 56 9e-06
>ref|XP_010656269.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Vitis vinifera]
Length = 954
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -3
Query: 253 PSNRMINSEYSSTEKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIR 74
P+ + + S SST K R + P L+ALGELEF+K FLILS G + + ED +S +EI
Sbjct: 77 PTPKHLISSPSSTPKKARRQASSPQLVALGELEFRKAFLILSYIG-DKRPEDLLSAEEIL 135
Query: 73 RIKSLQMGHFETRLRTILG 17
++K+L MG FET + LG
Sbjct: 136 KLKNLPMGVFETEVWNNLG 154
>ref|XP_010656270.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Vitis vinifera] gi|297738765|emb|CBI28010.3| unnamed
protein product [Vitis vinifera]
Length = 929
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -3
Query: 253 PSNRMINSEYSSTEKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIR 74
P+ + + S SST K R + P L+ALGELEF+K FLILS G + + ED +S +EI
Sbjct: 77 PTPKHLISSPSSTPKKARRQASSPQLVALGELEFRKAFLILSYIG-DKRPEDLLSAEEIL 135
Query: 73 RIKSLQMGHFETRLRTILG 17
++K+L MG FET + LG
Sbjct: 136 KLKNLPMGVFETEVWNNLG 154
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 56.6 bits (135), Expect = 7e-06
Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = -3
Query: 436 INYKLATQSDETVNQESVDCSELKKFDSSVSNSPRDDA---VTQRMSLEDPEKKKNKSLL 266
I Y + + V + + + S LK+ S S+ ++ + VT L P+ K
Sbjct: 63 IKYSFSGYINYLVKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSP 122
Query: 265 NVDQPSNRMINSEYSSTEKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISV 86
DQ S SS R + P +ALGELEF+K FLILS G E LE+ I+
Sbjct: 123 VADQQPR---GSPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITA 178
Query: 85 DEIRRIKSLQMGHFETRLRTILG 17
DEIR ++ LQM FE+ + LG
Sbjct: 179 DEIRGMRDLQMARFESEVWEKLG 201
>ref|XP_012076892.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
[Jatropha curcas]
Length = 1003
Score = 56.2 bits (134), Expect = 9e-06
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -3
Query: 310 MSLEDPEKK-KNKSLLNVDQPSNRMINSEYSSTEKMKRLTCNDPHLLALGELEFKKMFLI 134
+S + P++ ++ + + P+ + S +SS + P L ALGELEF+K FLI
Sbjct: 85 LSPQSPQQSSRSPTTTRLMMPARLHLESRFSSASSSAAVI--SPQLEALGELEFRKAFLI 142
Query: 133 LSCCGKEYKLEDFISVDEIRRIKSLQMGHFETRLRTILG 17
LS G YKLE+ IS ++IR IK L M FE + +G
Sbjct: 143 LSYMG-GYKLENVISAEKIRGIKDLPMDKFEIEVWNSIG 180
>ref|XP_012076891.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
[Jatropha curcas]
Length = 1008
Score = 56.2 bits (134), Expect = 9e-06
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -3
Query: 310 MSLEDPEKK-KNKSLLNVDQPSNRMINSEYSSTEKMKRLTCNDPHLLALGELEFKKMFLI 134
+S + P++ ++ + + P+ + S +SS + P L ALGELEF+K FLI
Sbjct: 85 LSPQSPQQSSRSPTTTRLMMPARLHLESRFSSASSSAAVI--SPQLEALGELEFRKAFLI 142
Query: 133 LSCCGKEYKLEDFISVDEIRRIKSLQMGHFETRLRTILG 17
LS G YKLE+ IS ++IR IK L M FE + +G
Sbjct: 143 LSYMG-GYKLENVISAEKIRGIKDLPMDKFEIEVWNSIG 180
>gb|KDO66531.1| hypothetical protein CISIN_1g001771mg [Citrus sinensis]
Length = 1015
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = -3
Query: 232 SEYSSTEKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRIKSLQM 53
S SS R + P +ALGELEF+K FLILS G E LE+ I+ DEIR ++ LQM
Sbjct: 133 SPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITADEIRGMRDLQM 191
Query: 52 GHFETRLRTILG 17
FE+ + LG
Sbjct: 192 ARFESEVWEKLG 203
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 56.2 bits (134), Expect = 9e-06
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = -3
Query: 358 DSSVSNSPRDDAVTQRMSLEDPEKKKNKSL----LNVDQPSNRMINSEYSSTEKMKRLTC 191
D S SP + V S P KK ++ L+++ PS + + E + K
Sbjct: 85 DGSPRLSPGESPV---QSPRTPAKKSCRASQDVSLDLETPSPKFMKREENGGSKYI---- 137
Query: 190 NDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRIKSLQMGHFETRLRTILG 17
P LLALGELEFKK FL+LS G E +E+ IS D+IR+ K L M +E + LG
Sbjct: 138 --PPLLALGELEFKKAFLLLSYIGGESLVEEVISGDQIRKWKDLPMVSYEAAVWNRLG 193
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 56.2 bits (134), Expect = 9e-06
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = -3
Query: 232 SEYSSTEKMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRIKSLQM 53
S SS R + P +ALGELEF+K FLILS G E LE+ I+ DEIR ++ LQM
Sbjct: 133 SPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIG-ENSLEEVITADEIRGMRDLQM 191
Query: 52 GHFETRLRTILG 17
FE+ + LG
Sbjct: 192 ARFESEVWEKLG 203
>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 56.2 bits (134), Expect = 9e-06
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Frame = -3
Query: 370 LKKFDSSVSNSPRDDAVTQRMSLEDPEKKKNKSL-------LNVDQPSNRMINSEYSSTE 212
+K D + + A S++ P KS ++++ PS + + E +
Sbjct: 67 VKTLDGIIMYFVNNAATVDGSSVQCPRTPGKKSCRLFQDVSIDLETPSPKFLRREENGGS 126
Query: 211 KMKRLTCNDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRIKSLQMGHFETRL 32
+ P LLALGELEFKK FL+LS G E +E+ IS DEIR+ K L M +E +
Sbjct: 127 SK-----HIPPLLALGELEFKKAFLLLSYIGGESLVEEVISGDEIRKWKDLPMVEYEAEV 181
Query: 31 RTILG 17
LG
Sbjct: 182 WNRLG 186
>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
Length = 966
Score = 56.2 bits (134), Expect = 9e-06
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Frame = -3
Query: 358 DSSVSNSPRDDAVTQRMSLEDPEKKKNKSL----LNVDQPSNRMINSEYSSTEKMKRLTC 191
D S SP + V S P KK ++ L+++ PS + + E + K
Sbjct: 85 DGSPRLSPGESPV---QSPRTPAKKSCRASQDVSLDLETPSPKFMKREENGGSKYI---- 137
Query: 190 NDPHLLALGELEFKKMFLILSCCGKEYKLEDFISVDEIRRIKSLQMGHFETRLRTILG 17
P LLALGELEFKK FL+LS G E +E+ IS D+IR+ K L M +E + LG
Sbjct: 138 --PPLLALGELEFKKAFLLLSYIGGESLVEEVISGDQIRKWKDLPMVSYEAAVWNRLG 193