BLASTX nr result

ID: Papaver31_contig00057324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00057324
         (469 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010676966.1| PREDICTED: uncharacterized protein LOC104892...    56   9e-06
ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06

>ref|XP_010676966.1| PREDICTED: uncharacterized protein LOC104892675 [Beta vulgaris
           subsp. vulgaris]
          Length = 917

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
 Frame = -3

Query: 344 QIGDGNDTTINHN-WIPHLASLNQQIMSHHLPPIT----KVVYFIDQHSNTWNHTLVFNT 180
           +IGDG D +++ + W+      N+ I    +P +T    +V   I  +   WN  ++ + 
Sbjct: 486 KIGDGRDISVSSDRWMTG----NRPIFRDCVPLLTARRLRVADLILPNQGQWNSRIINDL 541

Query: 179 FTPRLAQHIISIFLPRDPQ-KDKNMWPLSKDGNYNSKYGY 63
           F PR A+HI SI LP  P   D+  WP +K+G Y +K GY
Sbjct: 542 FEPRSARHIKSIELPPGPNINDEQFWPYTKNGKYTTKSGY 581


>ref|XP_009149305.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 963

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = -3

Query: 362 KEHCFSQIGDGNDTTI-NHNWIPHLASLNQQIMSHHLPPITKVVYFIDQHSNTWNHTLVF 186
           K+    QIG+G +T + N  W+    SL ++++S  L P  KV   I+Q S +WN  ++ 
Sbjct: 521 KKGLVMQIGNGQNTNVWNDQWLQ--TSLPRKLISPCLYPNMKVSELINQSSASWNEAILE 578

Query: 185 NTFTPRLAQHIISIFLPRDPQKDKNMWPLSKDGNYNSKYGY 63
             F P     I  I L R  Q D+ +WP + D  Y+ K GY
Sbjct: 579 ELFVPEDIIEIKKIRLSRFNQCDRYVWPFTSDCKYSVKSGY 619


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