BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00052581
         (1217 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   388   e-105
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   386   e-104
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   378   e-102
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     376   e-101
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     375   e-101
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   373   e-100
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     372   e-100
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     367   8e-99
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   367   8e-99
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   359   3e-96
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              353   2e-94
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              353   2e-94
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     352   5e-94
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              349   3e-93
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   348   7e-93
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        348   7e-93
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   347   9e-93
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   347   9e-93
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   347   9e-93
gb|AFB73912.1| polyprotein [Citrus sinensis]                          347   1e-92

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  388 bits (997), Expect = e-105
 Identities = 213/411 (51%), Positives = 282/411 (68%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1215 EKKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPL-QQVEIDATPLIPAKSVSVQNTS 1039
            EK+++MSR+V FDE  ++++     V+  +TS +  L +QVE             +QN S
Sbjct: 679  EKRVIMSRNVVFDESPLLRTI----VKPTTTSETGSLDKQVEFQV----------IQNES 724

Query: 1038 EDIESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGW---MNDY 868
             D++   E   E   ++DI             + + ++IA  +PRR   +P       D 
Sbjct: 725  -DLKEPEEEDQEPQTETDI--------PESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDM 775

Query: 867  IAYALPVIED---GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAI 697
            + YAL V E+     P++Y E + S++ ++W  AM DEMESL+KN TW L   P+G+K I
Sbjct: 776  VGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKII 835

Query: 696  GCKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQY 520
             CKWV+ KKEG S    V+YKAR+VA+G+ QREG+DYNE+FSPVV+H+SIR+LLA+VA  
Sbjct: 836  TCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQ 895

Query: 519  DLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRF 340
            +L+L QLDVKT FLHG+LEEEIYMTQP GF+V GKE+ VCKLKKSLYGLKQSPRQWYKRF
Sbjct: 896  NLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRF 955

Query: 339  DQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFE 160
            D +M+   YTRS YD CVY+ +L D SFIYL+LYVDDMLIA+  K +I  LK  LS EFE
Sbjct: 956  DSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFE 1015

Query: 159  MKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTP 7
            MKDLG A+KILGMEI RDRE+ K+ LSQ++Y++KVL +FG+   +K + TP
Sbjct: 1016 MKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGM-SSSKPIDTP 1065


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  386 bits (991), Expect = e-104
 Identities = 218/430 (50%), Positives = 280/430 (65%), Gaps = 27/430 (6%)
 Frame = -3

Query: 1215 EKKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEI-DATPLI---------PA 1066
            E ++++SRDVTFDE +M  S  ++   +   ST E  +QV   D TP +         P 
Sbjct: 768  EGRVILSRDVTFDENTMFVS-ANKPAGDTDESTDEGSEQVVAPDPTPQVRTQGKDNEAPV 826

Query: 1065 KSVSVQNTSEDIESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRK- 889
             S  V+ +  D+    E T +V +D +               TV E     +PR+ T++ 
Sbjct: 827  SSPIVETSQRDVAVVDE-TADVESDHE--------------ETVVE--GQKRPRKKTQRL 869

Query: 888  ---------PG---WMNDYIAYALPVIED---GTPTSYLEVVRSAECKEWEGAMQDEMES 754
                     PG    + + I YAL V ED     P SY E V S E  +W  AM +EMES
Sbjct: 870  IEQIEGRNVPGRNCCVEEMIGYALHVAEDIESPEPMSYKEAVSSNESAKWLVAMSEEMES 929

Query: 753  LYKNGTWVLTKLPNGKKAIGCKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVF 577
            L+KN TW L ++P G+K +GCKWV+ +KEG S+   VRYKARLVAKG++QREG+DYNE+F
Sbjct: 930  LHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVDYNEIF 989

Query: 576  SPVVKHSSIRILLALVAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCK 397
            SPVV+H+SIR+LLA+VA +DL+L QLDVKT FLHG+LEE+I M+QP GF V GKE   C 
Sbjct: 990  SPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFACS 1049

Query: 396  LKKSLYGLKQSPRQWYKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIA 217
            LKKSLYGLKQSPRQWYKRFD FM+   + RS YD CVY  K+ DGS+IYLLLYVDDMLIA
Sbjct: 1050 LKKSLYGLKQSPRQWYKRFDSFMVEHGFDRSPYDCCVYHSKVEDGSYIYLLLYVDDMLIA 1109

Query: 216  SNNKKEIDNLKQKLSTEFEMKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGV 37
            +  K ++  LK+ LS+EF+MKDLG AKKILGMEI RD  + K+ LSQK+Y+ KVL +FG+
Sbjct: 1110 AKKKSDVLKLKKLLSSEFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVLDRFGM 1169

Query: 36   YEGTKSVSTP 7
                KS+ TP
Sbjct: 1170 -STAKSIDTP 1178


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  378 bits (971), Expect = e-102
 Identities = 209/411 (50%), Positives = 272/411 (66%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  ++             ST+ P++  E  +  +    S       ED
Sbjct: 444  KKVVISRNVVFHESVILHD---------KPSTNVPVESQEKTSVQVEHLISSGHAPEKED 494

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      +DS IV             +   +IA  KP+R+ + P    +    +A
Sbjct: 495  VAINQDAPVIQDSDSSIVHQ-----------SPKRSIAKDKPKRNIKPPRRYIEEANIVA 543

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P+ Y E + S +C  W   M DEMESL KN TW L KLP  KK+I 
Sbjct: 544  YALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIR 603

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARLVAKGY+Q   ID+N+VFSP+VKHSSIR LL++VA +D
Sbjct: 604  CKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHD 663

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 664  YELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 723

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q + RS+YD+CVY K + DGS IYLLLYVDDMLIA+ +K EI+ LK +LS+EFEM
Sbjct: 724  SFMLSQKFRRSNYDNCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEM 782

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            KDLG AKKILGMEI R+R  GK+ LSQK Y++KVL++F +++  K VSTPL
Sbjct: 783  KDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHD-AKPVSTPL 832


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  376 bits (966), Expect = e-101
 Identities = 210/411 (51%), Positives = 271/411 (65%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  ++             ST+ P++  E  +  +    S       ED
Sbjct: 674  KKVVISRNVVFHESVILHD---------KPSTNVPVESQEKASVQVEHLISSGHAPEKED 724

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      +DS IV             +   +IA  KP+R+ + P    +    +A
Sbjct: 725  VAINQDAPVIEDSDSSIVHQ-----------SPKRSIAKDKPKRNIKPPRRYIEEAKIVA 773

Query: 861  YALPVIE----DGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E    +  P++Y E + S +C  W  AM DEMESL KN TW L KLP  KK I 
Sbjct: 774  YALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIR 833

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARLVAKGY+Q  GID+N+VFSPVVKHSSIR LL +VA +D
Sbjct: 834  CKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHD 893

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q++VKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 894  YELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 953

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q +  S+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI+ LK +LS+EFEM
Sbjct: 954  SFMLSQKFRISNYDSCVYLKVV-DGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEM 1012

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            KDLG AKKILGMEI R+R  GK+ LSQK Y++KVL++F +++  K VSTPL
Sbjct: 1013 KDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHD-AKPVSTPL 1062


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  375 bits (962), Expect = e-101
 Identities = 210/411 (51%), Positives = 271/411 (65%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  M+             ST+ P++  E  +  +    S       ED
Sbjct: 611  KKVVISRNVVFHESIMLHD---------KPSTNVPVESQEKVSVQVEHLISSGHAPEKED 661

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      +DS IV             +   +IA  +P+R+T+ P    +    +A
Sbjct: 662  VAINQDAPVIEDSDSSIVQQ-----------SPKRSIAKDRPKRNTKPPRRYIEEANIVA 710

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P++Y + + S +C  W  AM DEMESL KN +W L KLP  KK I 
Sbjct: 711  YALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIR 770

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARLVAKGY+Q  GID+N+VFSPVVKHSSIR LL++VA +D
Sbjct: 771  CKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHD 830

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 831  YELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 890

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q + RS+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI  LK +LS+EFEM
Sbjct: 891  SFMLSQKFRRSNYDSCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEM 949

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            KDLG AKKILGMEI R+R  GK+ LSQK Y++KVL +F +++  K VST L
Sbjct: 950  KDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHD-AKLVSTLL 999


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  373 bits (958), Expect = e-100
 Identities = 209/411 (50%), Positives = 270/411 (65%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  M+             ST+ P++  E  +  +    S       ED
Sbjct: 909  KKVVISRNVVFHESVMLHD---------KPSTNVPVESQEKASVQVEHLISSGHAPEKED 959

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      ++S IV             +   +IA  +P+R+ + P    +    +A
Sbjct: 960  VAINQDEPVIEDSNSSIVQQ-----------SPKRSIAKDRPKRNIKPPQRYIEEANIVA 1008

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P++Y E + S +C  W  AM DEMESL KN TW L KLP  KK I 
Sbjct: 1009 YALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIR 1068

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARL+AKGY+Q  GID+N+VFSPVVKHSSIR LL++VA +D
Sbjct: 1069 CKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHD 1128

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 1129 YELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRFD 1188

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q + RS+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI  LK +LS+EFEM
Sbjct: 1189 SFMLSQKFRRSNYDSCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFEM 1247

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            KDLG AKKILGMEI R R   K+ LSQK Y++KVL++F +++  K VSTPL
Sbjct: 1248 KDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHD-AKPVSTPL 1297


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  372 bits (955), Expect = e-100
 Identities = 209/411 (50%), Positives = 270/411 (65%), Gaps = 8/411 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  M+             ST+ P++  E  +  +    S       ED
Sbjct: 581  KKVVISRNVVFHESVMLHD---------KPSTNVPVESQEKASVQVEHLISSGHAPEKED 631

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++ +    +DS  V             +   +IA  KP+R+ + P    +    +A
Sbjct: 632  VAINQDASVIEDSDSSAVQQ-----------SPKRSIAKDKPKRNIKPPRRYIEEANIVA 680

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P++Y E + S  C  W  AM DEMESL KN TW L KLP  KK I 
Sbjct: 681  YALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIR 740

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +K+G S  ++ RYKARLVAKGY+Q  GID+N+VFSPV+KHSSIR LL++VA +D
Sbjct: 741  CKWIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHD 800

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ V +LKKSLYGLKQSPRQWYKRFD
Sbjct: 801  YELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWYKRFD 860

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM  Q + RS+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI+ LK +LS+EFEM
Sbjct: 861  SFMFSQKFRRSNYDSCVYLKVV-DGSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSSEFEM 919

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            KDLG AKKILGMEI R+R  GK+ LSQK Y++KVL++F +++  K VSTPL
Sbjct: 920  KDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHD-AKPVSTPL 969


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  367 bits (943), Expect = 8e-99
 Identities = 202/402 (50%), Positives = 263/402 (65%), Gaps = 8/402 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  ++             ST+ P++  E  +  +    S       E+
Sbjct: 737  KKVVISRNVVFHESVILHD---------KPSTNVPVESQEKASVQVEHLISSGHAPEKEN 787

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      +DS IV             +   +IA  KP+R+ + P    +    +A
Sbjct: 788  VAINQDAPVIEDSDSSIVQQ-----------SSKRSIAKDKPKRNIKPPRRYIEEANIVA 836

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P++Y E + S +C  W  AM DEMESL KN TW   KLP  KK I 
Sbjct: 837  YALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIR 896

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARLVAKGY+Q  GID+N+VFSP++KHSSIR LL +VA +D
Sbjct: 897  CKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHD 956

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 957  YELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFD 1016

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q + RS+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI  LK +LS+EF M
Sbjct: 1017 SFMLSQKFRRSNYDSCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGM 1075

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYE 31
            KDLG AKKILGMEI R+R  GK+ LSQK Y+KKVL++F +++
Sbjct: 1076 KDLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNMHD 1117


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  367 bits (943), Expect = 8e-99
 Identities = 202/402 (50%), Positives = 263/402 (65%), Gaps = 8/402 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            KK+V+SR+V F E  ++             ST+ P++  E  +  +    S       E+
Sbjct: 737  KKVVISRNVVFHESVILHD---------KPSTNVPVESQEKASVQVEHLISSGHAPEKEN 787

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMND---YIA 862
            +   ++      +DS IV             +   +IA  KP+R+ + P    +    +A
Sbjct: 788  VAINQDAPVIEDSDSSIVQQ-----------SSKRSIAKDKPKRNIKPPRRYIEEANIVA 836

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V E+      P++Y E + S +C  W  AM DEMESL KN TW   KLP  KK I 
Sbjct: 837  YALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIR 896

Query: 693  CKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKW++ +KEG S  ++ RYKARLVAKGY+Q  GID+N+VFSP++KHSSIR LL +VA +D
Sbjct: 897  CKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHD 956

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
             +L Q+DVKT FLHG+LEE+IYM QP GF V GKE+ VC+LKKSLYGLKQSPRQWYKRFD
Sbjct: 957  YELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFD 1016

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+ Q + RS+YD CVY K + DGS IYLLLYVDDMLIA+ +K EI  LK +LS+EF M
Sbjct: 1017 SFMLSQKFRRSNYDSCVYLKVV-DGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGM 1075

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYE 31
            KDLG AKKILGMEI R+R  GK+ LSQK Y+KKVL++F +++
Sbjct: 1076 KDLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNMHD 1117


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris subsp.
            vulgaris]
          Length = 2676

 Score =  359 bits (921), Expect = 3e-96
 Identities = 200/412 (48%), Positives = 261/412 (63%), Gaps = 8/412 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            ++++ SRDV FDE  M+       + N   S+ +  ++VE+++              S+D
Sbjct: 564  RRVITSRDVVFDESCMITPEKELSICNDVGSSHDTGEKVELESA-------------SQD 610

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMN---DYIA 862
               T E   E                     T  +T+A+ + RR  + P       DY+ 
Sbjct: 611  DALTHERHVEASPQ-----------------TQRKTLASERQRRQIKPPQRYVEECDYVQ 653

Query: 861  YALPVIED----GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIG 694
            YAL V  +      P SY E +   +  +W  AM+ EMESL+KN  W L   P  KK +G
Sbjct: 654  YALTVANEVETFDDPCSYKEAMSLPDSSKWLMAMKQEMESLHKNNIWELVVAPKKKKIVG 713

Query: 693  CKWVYAKKEGS-QVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYD 517
            CKWVY +KEG+       YKAR+VA+ + Q EG+D++EVF PVVKHSSIR+LLAL A  D
Sbjct: 714  CKWVYKRKEGTPDSGGPIYKARVVARRFTQVEGVDFHEVFPPVVKHSSIRVLLALEAMED 773

Query: 516  LDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFD 337
            L+L QLDVKT FLHGDLEEEIYM QP GF+V GKE+ VC+L KSLYGLKQSPRQWY+RFD
Sbjct: 774  LELHQLDVKTAFLHGDLEEEIYMKQPKGFEVEGKEEHVCRLVKSLYGLKQSPRQWYRRFD 833

Query: 336  QFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEM 157
             FM+   +TRS YD CVY+K+L  GSFIYLLLYVDDML+A  +  E++NLK+ L++ F+M
Sbjct: 834  SFMLAHEFTRSSYDSCVYYKELVSGSFIYLLLYVDDMLVACKHLIEVNNLKKLLNSGFDM 893

Query: 156  KDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPLG 1
            K+LGEAKKILGMEI RDR KG + LSQ+ Y++KVL++F +    K VSTPLG
Sbjct: 894  KNLGEAKKILGMEIWRDRSKGVLYLSQRRYIEKVLERFSM-NNAKPVSTPLG 944


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  353 bits (905), Expect = 2e-94
 Identities = 192/408 (47%), Positives = 258/408 (63%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            +K+V+SRDV F E  +       Q E ++ STS+         T ++  +  S ++ S +
Sbjct: 694  RKVVVSRDVVFAENEL-------QSEQKNDSTSKE--------TAIVQMEEKSKESDSSE 738

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMNDYI---- 865
             ES  E   + P+D                  V + +  S   R T+KP W +DY+    
Sbjct: 739  AESVHE--EQEPDD------------------VNDGVRRST--RQTQKPSWQSDYVMTSH 776

Query: 864  -AYALPVIEDGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIGCK 688
             AY L + E+G P+++ E +  ++  +W  AM +EME+L++N TW L +LP G+KAIG K
Sbjct: 777  DAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNK 835

Query: 687  WVYAKKEGSQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYDLDL 508
            WVY  K        RY+ARLV KGYAQ+EGID+NE+FSPVV+ ++IR++LA+ A  DL L
Sbjct: 836  WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHL 895

Query: 507  VQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFDQFM 328
             QLDVKT FLHG+LEEEIYM QP GFK  GKE+ VC+L KSLYGLKQ+PR WYKRFD F+
Sbjct: 896  EQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFI 955

Query: 327  IGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEMKDL 148
            I   Y R   DHC Y+K+     FI LLLYVDDML+   NK  +  LK +L+ EF+MKDL
Sbjct: 956  ISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDL 1015

Query: 147  GEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            G A KILGM+I RDR+  K+ LSQK YL+KVL++F + +  K +STPL
Sbjct: 1016 GPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM-QDCKPISTPL 1062


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  353 bits (905), Expect = 2e-94
 Identities = 192/408 (47%), Positives = 259/408 (63%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            +K+V+SRDV F E  +       Q E ++ STS+         T ++  +  S ++ S +
Sbjct: 694  RKVVVSRDVVFAENEL-------QSEQKNDSTSKE--------TAIVQMEEKSKESDSSE 738

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMNDYI---- 865
             ES  E   + P+D                  V + +  S   R T+KP W +DY+    
Sbjct: 739  AESVHE--EQEPDD------------------VNDGVRRST--RQTQKPSWQSDYVMTSH 776

Query: 864  -AYALPVIEDGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIGCK 688
             AY L + E+G P+++ E +  ++  +W  AM +EME+L++N TW L +LP G+KAIG K
Sbjct: 777  DAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNK 835

Query: 687  WVYAKKEGSQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYDLDL 508
            WVY  K        RY+ARLV KGYAQ+EGID+NE+FSPVV+ ++IR++LA+ A  DL L
Sbjct: 836  WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHL 895

Query: 507  VQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFDQFM 328
             QLDVKT FLHG+LEEEIYM QP GFK  GKE+ VC+L KSLYGLKQ+PR WYKRFD F+
Sbjct: 896  EQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFI 955

Query: 327  IGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEMKDL 148
            I   Y+R   DHC Y+K+     FI LLLYVDDML+   NK  +  LK +L+ EF+MKDL
Sbjct: 956  ISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDL 1015

Query: 147  GEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            G A KILGM+I RDR+  K+ LSQK YL+KVL++F + +  K +STPL
Sbjct: 1016 GPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNM-QDCKPISTPL 1062


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  352 bits (902), Expect = 5e-94
 Identities = 196/418 (46%), Positives = 262/418 (62%), Gaps = 14/418 (3%)
 Frame = -3

Query: 1215 EKKIVMSRDVTFDEMSMVK--------SWGSRQVENRSTSTSE-PLQQVEIDATPLIPAK 1063
            EKK++ SRDV FDE   +         +    QVE       E  +++ E    P + A+
Sbjct: 666  EKKVI-SRDVVFDEREAISISLAKPSVADSEAQVEQNEQGNDEVAIEEPEHQQQPTVMAQ 724

Query: 1062 SVSVQNTSEDIESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKP- 886
               V+ + +     R   + +P   +               +   +IA  KP+R+ RKP 
Sbjct: 725  ---VEQSPQ-----RGQNSPIPQAPE---------------SFKRSIALDKPKRN-RKPI 760

Query: 885  ---GWMNDYIAYALPVIEDGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLP 715
               G+  +        I  G PT+Y + + S E   W GAM +EMESL+KN  W L   P
Sbjct: 761  QRFGFEPEEDVSRALSISQGDPTTYEDAIESVESAGWIGAMTEEMESLHKNSVWELVPKP 820

Query: 714  NGKKAIGCKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILL 538
              +K +GCKWV+ KKEG  + + + YKARLVAKGY+Q+EG+DY+E+FSPVVKH+SIR+LL
Sbjct: 821  KERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLL 880

Query: 537  ALVAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPR 358
            ++ AQYD+++ Q+DVKT FLHGDLEE+IYM+QP GF   GKE+ VC+LKKSLYGLKQSPR
Sbjct: 881  SIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPR 940

Query: 357  QWYKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQK 178
            QWYK FD +M+   YTR  YD CVY+    DG  I LLLYVDDMLIA  +  +I  LK+K
Sbjct: 941  QWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKK 1000

Query: 177  LSTEFEMKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            L  EF+MKDLG A+KILG+EI+RDR  GK+ LSQ+ Y+ K+L++F + E  K VS PL
Sbjct: 1001 LGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAE-AKVVSIPL 1057


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  349 bits (895), Expect = 3e-93
 Identities = 188/408 (46%), Positives = 256/408 (62%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1212 KKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSED 1033
            +K+V+SRDV F E  +       Q + ++ STS+         T ++  +  S ++ S +
Sbjct: 694  RKVVVSRDVVFAENEL-------QSKQKNDSTSKE--------TAIVQMEEKSKESDSSE 738

Query: 1032 IESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMNDYI---- 865
             E   E   + P+D +                        +  R T+KP W +DY+    
Sbjct: 739  AEPVHE--EQEPDDVNN--------------------GVRRSTRQTQKPSWQSDYVMTSH 776

Query: 864  -AYALPVIEDGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIGCK 688
             AY L + E+G P+++ E +  ++  +W  AM +EME+L++N TW L +LP G+KAIG K
Sbjct: 777  DAYCL-ITEEGEPSTFHEALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNK 835

Query: 687  WVYAKKEGSQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYDLDL 508
            WVY  K        RY+ARLV KGYAQ+EGID+NE+FSPVV+ ++IR++LA+ A  DL L
Sbjct: 836  WVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHL 895

Query: 507  VQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFDQFM 328
             QLDVKT FLHG+LEEEIYM QP GFK  GKE+ VC+L KSLYGLKQ+PR WYKRFD F+
Sbjct: 896  EQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFI 955

Query: 327  IGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEMKDL 148
            I   Y+R   DHC Y+K+     FI LLLYVDDML+   NK  +  LK +L+ EF+MKDL
Sbjct: 956  ISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDL 1015

Query: 147  GEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            G A KILGM+I RDR+  K+ LSQK YL+KVL++F + +  K +STPL
Sbjct: 1016 GPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNM-QDCKPISTPL 1062


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  348 bits (892), Expect = 7e-93
 Identities = 196/429 (45%), Positives = 269/429 (62%), Gaps = 24/429 (5%)
 Frame = -3

Query: 1215 EKKIVMSRDVTFDEMSM-----VKSWGSRQVENRSTSTSEPLQ-------------QVEI 1090
            E+K V+SR+V F E  +     VK   +  +  + T++SE  Q             Q++ 
Sbjct: 706  EEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQS 765

Query: 1089 DATPLIPAKSVSVQNTSEDIESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSK 910
            D+ P+   +  S  ++ E++E + E T E P  + +                T  +A  +
Sbjct: 766  DSEPITEGEQSS--DSEEEVEYS-EKTQETPKRTGLT---------------TYKLARDR 807

Query: 909  PRRSTRKPGWMNDY--IAYALPVIED---GTPTSYLEVVRSAECKEWEGAMQDEMESLYK 745
             RR+   P    +   + +AL V+E+     P SY E + S +C++W+ A  DEM+SL K
Sbjct: 808  VRRNINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMK 867

Query: 744  NGTWVLTKLPNGKKAIGCKWVYAKKEGSQ-VNQVRYKARLVAKGYAQREGIDYNEVFSPV 568
            NGTW L   P  +K IGC+W++  K G   V   R+KARLVAKGY QREG+DY E+F+PV
Sbjct: 868  NGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPV 927

Query: 567  VKHSSIRILLALVAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKK 388
            VKH SIRIL++LV   DL+L Q+DVKTTFLHGDLEEE+YM QP GF     E+ VC+LKK
Sbjct: 928  VKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKK 987

Query: 387  SLYGLKQSPRQWYKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNN 208
            SLYGLKQSPRQW KRFD+FM  Q + RS +D CVY K + +  FIYLLLYVDDMLIA  +
Sbjct: 988  SLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGAS 1047

Query: 207  KKEIDNLKQKLSTEFEMKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEG 28
            K EI+ +K++LSTEFEMKD+G A +ILG++I RDR+ G + LSQ+ Y++KVL +F +  G
Sbjct: 1048 KAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNM-SG 1106

Query: 27   TKSVSTPLG 1
             K  + P+G
Sbjct: 1107 AKMTNAPVG 1115


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  348 bits (892), Expect = 7e-93
 Identities = 200/417 (47%), Positives = 257/417 (61%), Gaps = 14/417 (3%)
 Frame = -3

Query: 1209 KIVMSRDVTFDEMSMVKSWGSRQV---ENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTS 1039
            K ++SRDV F E  ++K          +N + +     +  +++   L+  KS   +  S
Sbjct: 693  KCIVSRDVVFHESVLLKESAEHDAGLQDNPAANKRSGSETSKVNVE-LLTDKSSEKEAAS 751

Query: 1038 EDIESTREV----TTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKP---GW 880
            +D  +T E      +E+P  +D+                   +A  + RR  R P   G+
Sbjct: 752  DDERATAESEEHEVSELPQ-ADLQNYQ---------------LARDRVRREVRAPVRYGY 795

Query: 879  MNDYIAYALPVIEDGT---PTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNG 709
              D IAYAL   ++ T   P ++ E + S  C +W  AMQDEMESL +N TW L   P  
Sbjct: 796  A-DLIAYALLCADEVTIEEPANFSEAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGN 854

Query: 708  KKAIGCKWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLAL 532
            K+ I CKW++ + EG   V   +YKARLVA+G+ QREG+D+NE+FSPVVKHSSIRILLA+
Sbjct: 855  KRLINCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEIFSPVVKHSSIRILLAM 914

Query: 531  VAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQW 352
            VA  DL+L Q+DVKT FLHG+LEE+I M QP GF+   KED VC L KSLYGLKQSPRQW
Sbjct: 915  VALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQW 974

Query: 351  YKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLS 172
            Y+RFD FM+ + Y RS YD CVYF     G   YLLLYVDDMLIAS  K EI+ LK  L 
Sbjct: 975  YRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASKYKSEIERLKNLLK 1034

Query: 171  TEFEMKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPLG 1
             EFEMKDLG AK+ILGM+I RDR  G + LSQ  Y+KKVL++F + +  K V TPLG
Sbjct: 1035 AEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEM-QDCKPVQTPLG 1090


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  347 bits (891), Expect = 9e-93
 Identities = 197/419 (47%), Positives = 265/419 (63%), Gaps = 14/419 (3%)
 Frame = -3

Query: 1215 EKKIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSV--QNT 1042
            ++K V+SRD+ F E  M K         ++  + E  Q  E++ T LI  K++S   +N 
Sbjct: 694  DRKCVVSRDIVFQENQMYKEL------QKNDMSEEDKQLTEVERT-LIELKNLSADDENQ 746

Query: 1041 SEDIESTRE----VTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWM- 877
            SE  +++ +     T     D  +            +      +A  + RR  R P    
Sbjct: 747  SEGGDNSNQEQASTTRSASKDKQV-----EETDSDDDCLENYLLARDRIRRQIRAPQRFV 801

Query: 876  ---NDYIAYALPVIEDGT---PTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLP 715
               +  + +AL + EDG    P +Y E +RS EC++W+ A  +EM+S+ KN TW +   P
Sbjct: 802  EEDDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKP 861

Query: 714  NGKKAIGCKWVYAKKEGSQ-VNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILL 538
             GK+ IGCKW++ +K G   V   RYKARLVAKG++QREGIDY E+FSPVVKH SIR LL
Sbjct: 862  EGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLL 921

Query: 537  ALVAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPR 358
            ++V Q+D++L QLDVKT FLHG+L+E I M+QP G++     + VC LKKSLYGLKQSPR
Sbjct: 922  SIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPR 981

Query: 357  QWYKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQK 178
            QW +RFD FMI   Y RS Y+ CVY ++L DGS+IYLLLYVDDMLIAS NK +I  LK+ 
Sbjct: 982  QWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKES 1041

Query: 177  LSTEFEMKDLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPLG 1
            L+ EFEMKDLG A+KILGMEI R+RE+G + LSQ  Y+  VL+ FG+ + +K   TPLG
Sbjct: 1042 LNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGM-DQSKVSQTPLG 1099


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  347 bits (891), Expect = 9e-93
 Identities = 194/385 (50%), Positives = 249/385 (64%), Gaps = 15/385 (3%)
 Frame = -3

Query: 1209 KIVMSRDVTFDEMSMV---KSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTS 1039
            K ++SRDVTFDE +M    K +G     +++   +    + E+DA          ++N  
Sbjct: 804  KFIISRDVTFDESAMFGQRKEFGDLAGTSKTDLGANQKVEFEVDAP---------MENGV 854

Query: 1038 EDIESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKP--------G 883
            +D    + V  +  NDS                   ++IA  +PRR  R+P         
Sbjct: 855  DDTSEEQPVIDQ--NDS-------------------QSIAAHRPRREIRRPMRYVDCVSA 893

Query: 882  WMNDYIAYALPVIED---GTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPN 712
             + + +A+AL V E+     P SY E + S + K+W  +M DEM SL KN TW L  LP 
Sbjct: 894  NITNPVAFALAVAEEIGREEPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPE 953

Query: 711  GKKAIGCKWVYAKKEGSQVNQV-RYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLA 535
            G K + CKW++  K+G   ++  +YK+RLVAKG++Q+EGIDYNEVFSPVVKH SIR+LLA
Sbjct: 954  GVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLA 1013

Query: 534  LVAQYDLDLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQ 355
            +V+ ++L+L QLDVKT FLHG+LEEEIYM QP GF  + K D VC LKKSLYGLKQSPRQ
Sbjct: 1014 MVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQ 1073

Query: 354  WYKRFDQFMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKL 175
            WYKRFD FM+   + R+ YD CVYFK L DGSFIYLLLYVDDMLIA+ N+ EI+ LKQ L
Sbjct: 1074 WYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLL 1133

Query: 174  STEFEMKDLGEAKKILGMEIQRDRE 100
            S+EFEMKDLG AKKILGMEI RDR+
Sbjct: 1134 SSEFEMKDLGAAKKILGMEIWRDRD 1158


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  347 bits (891), Expect = 9e-93
 Identities = 200/410 (48%), Positives = 259/410 (63%), Gaps = 8/410 (1%)
 Frame = -3

Query: 1209 KIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSEDI 1030
            K  MSR+V F+E  M     S   +     + E  Q V +    +   ++  V N   D+
Sbjct: 696  KTFMSRNVIFNEFVMFND--SLPTDVIPGGSDEEQQYVSVQVEHVDDQETEIVGN---DV 750

Query: 1029 ESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMN---DYIAY 859
              T + +  V    D                  E IA  + +RS   P  +    D + Y
Sbjct: 751  NDTVQHSPSVLQPQD------------------EPIAHRRTKRSCGAPVRLIEECDMVYY 792

Query: 858  ALPVIEDGT----PTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIGC 691
            A    E       P +Y E V S + ++W  A+Q+EM+SL KNGTW L  LP  KK + C
Sbjct: 793  AFSYAEQVENTLEPATYTEAVVSGDREKWISAIQEEMQSLEKNGTWELVHLPKQKKPVRC 852

Query: 690  KWVYAKKEG-SQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYDL 514
            KW++ +KEG S     R+K RLVAKG++Q  G+DYN+VFSPVVKHSSIR   ++V  +DL
Sbjct: 853  KWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDL 912

Query: 513  DLVQLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFDQ 334
            +L QLDVKTTFLHG+LEEEIYM QP GF V GKED VCKLK+SLYGLKQSPRQWYKRFD 
Sbjct: 913  ELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDS 972

Query: 333  FMIGQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEMK 154
            FM+   + RS +D CVY K + +GS IYLLLYVDDMLIA+ +K++I  LK++LS+EF+MK
Sbjct: 973  FMLSHGFKRSEFDSCVYIKFV-NGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMK 1031

Query: 153  DLGEAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
            DLG AKKILGMEI RDR  G + LSQ++Y+KKVLQ+F +++  K VSTP+
Sbjct: 1032 DLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHD-AKPVSTPI 1080


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  347 bits (890), Expect = 1e-92
 Identities = 191/407 (46%), Positives = 247/407 (60%), Gaps = 5/407 (1%)
 Frame = -3

Query: 1209 KIVMSRDVTFDEMSMVKSWGSRQVENRSTSTSEPLQQVEIDATPLIPAKSVSVQNTSEDI 1030
            KIV+SRDV F E  + +  G        + T              +P    +    S+  
Sbjct: 695  KIVISRDVIFVEDQLQRKDGDDGTVKEKSET--------------VPVYVENNPENSDSS 740

Query: 1029 ESTREVTTEVPNDSDIVXXXXXXXXXXXEATVTETIATSKPRRSTRKPGWMNDY-----I 865
            E+  E   + P +S                   E     +  R  R P W ++Y     +
Sbjct: 741  EAAPEHEEQEPVES-------------------EAPEVRRSTRERRPPTWHSEYVTEINV 781

Query: 864  AYALPVIEDGTPTSYLEVVRSAECKEWEGAMQDEMESLYKNGTWVLTKLPNGKKAIGCKW 685
            AY L + EDG P+++ E + S +   W  AMQ+E+E+L+KN TW L  LP+G+KAIG KW
Sbjct: 782  AYCL-LTEDGEPSTFHEALNSLDVALWMTAMQEEIEALHKNKTWELVPLPHGRKAIGNKW 840

Query: 684  VYAKKEGSQVNQVRYKARLVAKGYAQREGIDYNEVFSPVVKHSSIRILLALVAQYDLDLV 505
            VY  K        RY+ARLV KGYAQ+EGID+NE+FSPVV+ +++RI+LA+ A +DL L 
Sbjct: 841  VYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLE 900

Query: 504  QLDVKTTFLHGDLEEEIYMTQPSGFKVAGKEDCVCKLKKSLYGLKQSPRQWYKRFDQFMI 325
            QLDVKT FLHG+LEEEIYM QP GF   GKE+ VC+L KSLYGLKQ+PR WYKRFD F++
Sbjct: 901  QLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIM 960

Query: 324  GQTYTRSHYDHCVYFKKLRDGSFIYLLLYVDDMLIASNNKKEIDNLKQKLSTEFEMKDLG 145
               Y R   DHC Y+K+  D  FI LLLYVDDML+A  NK  I  LK +L+ EFEMKDLG
Sbjct: 961  SLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLG 1020

Query: 144  EAKKILGMEIQRDREKGKVCLSQKAYLKKVLQKFGVYEGTKSVSTPL 4
             A KILGM+I RDR   K+ LSQK YLKK+L++F + +  KS+STPL
Sbjct: 1021 PANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNM-QDCKSISTPL 1066