BLASTX nr result
ID: Papaver31_contig00050851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00050851
(693 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008390627.1| PREDICTED: uncharacterized protein LOC103452... 60 4e-19
ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440... 50 6e-19
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 57 7e-15
ref|XP_008389560.1| PREDICTED: uncharacterized protein LOC103451... 42 9e-14
ref|XP_008376319.1| PREDICTED: uncharacterized protein LOC103439... 58 1e-13
emb|CCH50966.1| T4.5 [Malus x robusta] 59 4e-13
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 43 7e-13
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 41 1e-11
ref|XP_008342970.1| PREDICTED: uncharacterized protein LOC103405... 49 2e-11
gb|EPS62921.1| hypothetical protein M569_11867 [Genlisea aurea] 48 1e-10
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 44 2e-10
ref|XP_008382851.1| PREDICTED: uncharacterized protein LOC103445... 52 3e-10
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 58 6e-10
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 47 6e-10
emb|CAN77632.1| hypothetical protein VITISV_041497 [Vitis vinifera] 52 8e-10
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 43 1e-09
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 50 1e-09
emb|CAN80469.1| hypothetical protein VITISV_008623 [Vitis vinifera] 52 1e-09
ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431... 45 2e-09
emb|CAN73074.1| hypothetical protein VITISV_032386 [Vitis vinifera] 50 4e-09
>ref|XP_008390627.1| PREDICTED: uncharacterized protein LOC103452871 [Malus domestica]
Length = 1159
Score = 60.5 bits (145), Expect(4) = 4e-19
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P+ NLLS ++F N+C+LTLDS G ++K R +R++L QGP Y + S A
Sbjct: 396 PKMKFNLLSAYQFLKDNSCALTLDSDGSTIKDRSTRRMLFQGPVSAGFYPLQGIPSTSAP 455
Query: 254 SS-IT*KALL---YRRFGHLSFQTLRKICN 177
S+ ++ KA L +RR GH S RKI N
Sbjct: 456 STFLSTKASLQTWHRRLGHPSIAMFRKILN 485
Score = 44.7 bits (104), Expect(4) = 4e-19
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1
Query: 144 FLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISG 10
F CT+C + +++K PF S + ++ EL+H D+WGP +SG
Sbjct: 499 FFCTDCAIGKNHKLPFSSSTSSASASLELIHCDVWGPAPVVFVSG 543
Score = 35.0 bits (79), Expect(4) = 4e-19
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 691 KSPQTNLSAMFAAADIFDAEEWIVDSGANNHITPDPSVLKESLPY 557
K P L+ M + + W++D GA +HIT D + L +PY
Sbjct: 312 KIPPAKLAVMCVHTNSKTSPTWLIDYGATSHITNDTAALHSPIPY 356
Score = 21.2 bits (43), Expect(4) = 4e-19
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 549 GSEIINTSNG*VMSITHTGTS 487
G E + +G MSI H+GTS
Sbjct: 358 GEEKVYIGDGQGMSIHHSGTS 378
>ref|XP_008376990.1| PREDICTED: uncharacterized protein LOC103440084 [Malus domestica]
Length = 1106
Score = 49.7 bits (117), Expect(4) = 6e-19
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQA- 258
P H+LLS ++F N+CSLTLD HG SVK R + + G + + +SS A
Sbjct: 277 PHMKHSLLSAYQFIKDNDCSLTLDIHGSSVKDRFTGXTXLXGXVRGGFFPXQGSSSSXAP 336
Query: 257 ------LSSIT*KALLYRRFGHLSFQTLRKI 183
+S T + + R GH S RK+
Sbjct: 337 TSPTALVSXSTNVRIWHSRLGHPSSVIFRKV 367
Score = 48.5 bits (114), Expect(4) = 6e-19
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = -1
Query: 156 SNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
S+ F C +C L +++K PF + + S+ ELLH D+WGP S+SG Y
Sbjct: 379 SSPDFFCKDCALAKNHKLPFGTTPSASSTSLELLHCDVWGPSPVVSVSGYRY 430
Score = 38.1 bits (87), Expect(4) = 6e-19
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 691 KSPQTNLSAMFAAADIFDAEEWIVDSGANNHITPDPSVLKESLPY 557
K P L+AM A + W++DSGA +HIT D S ++ PY
Sbjct: 193 KFPPXKLAAMCAHYTAKSSNSWLIDSGATSHITNDISNIQSPTPY 237
Score = 24.6 bits (52), Expect(4) = 6e-19
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 549 GSEIINTSNG*VMSITHTGTSSKH 478
G + + +G +SI HTGTS+ H
Sbjct: 239 GEDXVYIGDGKGLSIAHTGTSTLH 262
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 57.4 bits (137), Expect(2) = 7e-15
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI-------TF 276
PQ H+LLS ++F N+CSLTLD +G SVK R + + L++G K+ + + T
Sbjct: 442 PQMQHSLLSAYQFIKDNBCSLTLDINGSSVKDRFTGRTLLRGQVKDGFFPLHGSPALSTV 501
Query: 275 NSSPQALSSIT*KALLYR-RFGHLSFQTLRKI 183
+ SP AL S ++ R GH S RK+
Sbjct: 502 SHSPTALVSTAANVRIWHSRLGHPSSAIFRKV 533
Score = 50.4 bits (119), Expect(2) = 7e-15
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = -1
Query: 156 SNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
S+ F C +C L +++K PF +VST ELLH D+WGP S+SG Y
Sbjct: 545 SSLAFFCKDCALAKNHKLPFGSPQSVSTASLELLHCDVWGPSPVVSVSGYRY 596
>ref|XP_008389560.1| PREDICTED: uncharacterized protein LOC103451895 [Malus domestica]
Length = 1300
Score = 42.0 bits (97), Expect(4) = 9e-14
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Frame = -1
Query: 261 SSFLNNIKSSSV*EIWSSIFSNTSKNL*CLEL--SNVSNK----PFLCTECKLCRSYKFP 100
S+ L + SS+ +W S + S + + L S++S P LC C + K P
Sbjct: 553 SALLGQLVSSN---LWHSRLGHPSNTIASIMLTKSHISCTKDIVPRLCHNCLEGKFTKLP 609
Query: 99 FQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
FQ S + S P E +H DLWGP SI G Y
Sbjct: 610 FQSSVHNSVIPFETIHSDLWGPSPCNSIDGYKY 642
Score = 40.8 bits (94), Expect(4) = 9e-14
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI 282
P+ S NLLS H+ NNC L D++ F ++ + + +IL +G N +Y I
Sbjct: 485 PRLSQNLLSVHRICLDNNCWLVFDAYCFWIQDKATWRILYKGLCSNGLYPI 535
Score = 36.6 bits (83), Expect(4) = 9e-14
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = -3
Query: 688 SPQTNLSAMFAAADIFDA----EEWIVDSGANNHITPDPSVLKESLPY 557
SPQ+N+ A+ + + + W+ DSGA NH+T D S L + PY
Sbjct: 398 SPQSNIQALHTVSSPSSSAPTSQMWLTDSGATNHMTADFSNLSMATPY 445
Score = 23.5 bits (49), Expect(4) = 9e-14
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 546 SEIINTSNG*VMSITHTGTSSKH 478
+E + T+NG + I+H G+S H
Sbjct: 448 NETVQTANGEGLQISHIGSSIMH 470
>ref|XP_008376319.1| PREDICTED: uncharacterized protein LOC103439538 [Malus domestica]
Length = 1217
Score = 58.2 bits (139), Expect(2) = 1e-13
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Frame = -2
Query: 422 HNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQALSS-- 249
HNLL ++F NNC+LTLD G +VK R+S K L++G K Y + +S P + S
Sbjct: 400 HNLLFAYQFLKDNNCALTLDPDGSTVKDRVSGKTLLRGQVKEGFYPLQGSSHPPSSSPSA 459
Query: 248 -IT*KA---LLYRRFGHLSFQTLRKI 183
I+ KA + +RR GH S RK+
Sbjct: 460 FISVKAHVQIWHRRLGHPSSSIFRKV 485
Score = 45.4 bits (106), Expect(2) = 1e-13
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = -1
Query: 138 CTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
C++C L +S+K PF + + +T+ +LLH DLWGP S SG Y
Sbjct: 503 CSDCALAKSHKLPFGSAHSTTTQILQLLHCDLWGPAPITSPSGFKY 548
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 58.9 bits (141), Expect(2) = 4e-13
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
PQASHNLLS +KF N C LT D GF VK + K+L QGP + +Y +N+S
Sbjct: 654 PQASHNLLSVYKFVYDNWCYLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVS 713
Query: 254 S-SIT*KALL---------YRRFGHLSFQTLRKI 183
+I+ AL+ +RR GH S TL +
Sbjct: 714 GIAISPTALMIAKADIHTWHRRLGHPSGGTLHSV 747
Score = 43.1 bits (100), Expect(2) = 4e-13
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -1
Query: 153 NKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISG 10
N +CT C+L +SY+ F S++P +LLH D+WGP +S +G
Sbjct: 760 NNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCTG 807
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 43.1 bits (100), Expect(4) = 7e-13
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -1
Query: 141 LCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASI 16
LC C++ +S + PF S V+T+P E +H D+WGP S+
Sbjct: 495 LCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSV 536
Score = 39.3 bits (90), Expect(4) = 7e-13
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI------TFN 273
PQ + LLS KFT+ C D+ + + ++K+L+QG + +Y I F
Sbjct: 394 PQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKATKKVLLQGRNTKGLYSIKEPAFHAFF 453
Query: 272 SSPQALSSIT*KALLYRRFGHLSFQTLRKICNV 174
S+ Q +S + ++R GH + L+++ ++
Sbjct: 454 STRQVAAS---DEVWHQRLGHPNPHILQRLASI 483
Score = 32.7 bits (73), Expect(4) = 7e-13
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 676 NLSAMFAAADIFDAE--EWIVDSGANNHITPDPSVLKESLPYI 554
N A +D+ D+ EW D+GA+ HIT P L+ + PY+
Sbjct: 313 NALAAMRVSDMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYM 355
Score = 24.6 bits (52), Expect(4) = 7e-13
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 549 GSEIINTSNG*VMSITHTGTSS 484
GS+ + NG + ITHTG +S
Sbjct: 356 GSDSVMVGNGEYLPITHTGAAS 377
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 40.8 bits (94), Expect(4) = 1e-11
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 141 LCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
+C C L +S + PF S +++P E +H DLWGP +S+ G Y
Sbjct: 491 VCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRY 537
Score = 39.3 bits (90), Expect(4) = 1e-11
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMY-------HITF 276
P +LLS K TS CS+ D+ + + ++K+LV G +++ +Y + +
Sbjct: 389 PDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQVLY 448
Query: 275 NSSPQALSSIT*KALLYRRFGHLSFQTLRKICN 177
++ + SS + +RR GH + + L ++ +
Sbjct: 449 STRQNSASS----EVWHRRLGHANAEVLHQLAS 477
Score = 32.0 bits (71), Expect(4) = 1e-11
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 667 AMFAAADIFD--AEEWIVDSGANNHITPDPSVLKESLPY 557
A D+ D EWI DS A+ H+T + VL++S PY
Sbjct: 311 ATMRITDVTDHHGHEWIPDSAASAHVTNNRHVLQQSQPY 349
Score = 23.5 bits (49), Expect(4) = 1e-11
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 549 GSEIINTSNG*VMSITHTGTSS 484
GS+ I ++G + ITHTG+ S
Sbjct: 351 GSDSIMVADGNFLPITHTGSGS 372
>ref|XP_008342970.1| PREDICTED: uncharacterized protein LOC103405720 [Malus domestica]
Length = 887
Score = 48.5 bits (114), Expect(2) = 2e-11
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI---TFNSSP 264
P HNLLS ++F N CS TL +G VK R + K+L++GP Y + + SP
Sbjct: 350 PPMKHNLLSAYQFLKDNYCSXTLTXNGSIVKDRSTGKMLLRGPXTXGFYLLQGTPXSFSP 409
Query: 263 QALSS---IT*KA---LLYRRFGHLSFQTLRKI 183
LSS + KA + + R GH S ++K+
Sbjct: 410 TXLSSHALVCTKASVNIWHSRLGHPSSSIIKKV 442
Score = 47.8 bits (112), Expect(2) = 2e-11
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = -1
Query: 174 LELSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
L L + F C++C + +++K PF S + ST LLH D+WGP SI G Y
Sbjct: 448 LALXGKKSVNFFCSDCAIAKTHKLPFPQSSSFSTTSLSLLHCDVWGPXPVVSICGYKY 505
>gb|EPS62921.1| hypothetical protein M569_11867 [Genlisea aurea]
Length = 1264
Score = 47.8 bits (112), Expect(2) = 1e-10
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = -1
Query: 168 LSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
L+N S+ C C+L + + PF + + K E LH+DLWGP H S SGN Y
Sbjct: 520 LNNFSSSDDFCHTCRLSKPTRLPFPINFKRAEKSFEALHIDLWGPYHTPSRSGNRY 575
Score = 45.8 bits (107), Expect(2) = 1e-10
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P + NLLS ++ N DS G+ + R S KIL G N +Y + S Q
Sbjct: 430 PGFTFNLLSVYRLAEKYNIRGIFDSDGWCFQDRRSNKILAAGDVLNGLYRLRDQESRQDY 489
Query: 254 SSIT*KALLYR----RFGHLSFQTLRKICNVLNF 165
S+ + R RFGH SF+ LR I + NF
Sbjct: 490 SNFAKSDVDLRTWHLRFGHASFRVLRNISFLNNF 523
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 43.9 bits (102), Expect(3) = 2e-10
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -1
Query: 141 LCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
+C C+L +S + PF S ++++P E +H DLWGP +SI G Y
Sbjct: 479 MCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQY 525
Score = 36.6 bits (83), Expect(3) = 2e-10
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKND-MYHITFNSSPQA 258
P + +LLS K T CS T D+ G VK + + K+L +G ++ +Y +
Sbjct: 377 PNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKLENPKFQMF 436
Query: 257 LSSIT*KA---LLYRRFGHLSFQTLRKICN 177
S+ KA + + R GH + Q L+ + N
Sbjct: 437 YSTRQVKATDEVWHMRLGHPNPQVLQLLAN 466
Score = 31.6 bits (70), Expect(3) = 2e-10
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -3
Query: 670 SAMFAA---ADIFDAEEWIVDSGANNHITPDPSVLKESLPYI 554
+A F+A D+ D W+ DS A HIT + S L++ PY+
Sbjct: 297 AAAFSALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYL 338
>ref|XP_008382851.1| PREDICTED: uncharacterized protein LOC103445612 [Malus domestica]
Length = 573
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI-----TFN- 273
PQ HNLL ++F N CSLTL S+ VK R + K+ +QGP N Y + +F+
Sbjct: 427 PQMKHNLLFAYQFLKDNYCSLTLHSNDSVVKDRYTGKMFLQGPVNNGFYTLQGIPASFSP 486
Query: 272 --SSPQALSSIT*KALL---YRRFGHLSFQTLRKI 183
SSP AL + KAL+ + R GH S R++
Sbjct: 487 SCSSPHAL--VGTKALVNIWHSRLGHPSSAIFRRV 519
Score = 39.7 bits (91), Expect(2) = 3e-10
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 174 LELSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLW 40
L L + F C++C + +++K PF S ++ST LLH D+W
Sbjct: 525 LALQGKHSVDFFCSDCAIAKNHKLPFHPSGSISTTSLSLLHCDVW 569
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 57.8 bits (138), Expect(2) = 6e-10
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P NLLS +FT NNCS+ D GFSVKG +R+++++ + D+Y + + A
Sbjct: 421 PSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNSRGDLYTLPIAAPAIAA 480
Query: 254 SSIT*KA--LLYRRFGHLS---FQTLRKI----CNVLNFQMC 156
S ++ L +RR GH S QTL K+ C ++ +C
Sbjct: 481 HSFLAQSSTLWHRRLGHPSSAAIQTLHKLAILPCTKIDHSLC 522
Score = 33.5 bits (75), Expect(2) = 6e-10
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 141 LCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLW 40
LC CKL + + PF S + ++ P EL+H D+W
Sbjct: 521 LCHACKLGKHTRLPFSRSQSSTSSPFELVHCDVW 554
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 46.6 bits (109), Expect(2) = 6e-10
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = -1
Query: 195 TSKNL*CLELSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGP 34
+S L CL SNK +C C+ +S++ P+ S +VS KP EL++ D+WGP
Sbjct: 368 SSNKLPCLR---ESNKESVCDACQKAKSHQLPYSNSMSVSNKPLELIYSDVWGP 418
Score = 44.7 bits (104), Expect(2) = 6e-10
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHI-TFNSSPQA 258
PQA+ NL+S K S N+ + + S F +K R +R +++GP ++ +Y + + +S+ QA
Sbjct: 282 PQAAKNLISATKLASDNSVFVEIHSKYFLIKDRTTRSTVLKGPRRHGLYPLPSTSSTKQA 341
Query: 257 LSSIT*KALLYRRFGHLSFQTLRKI 183
+ + R GH S + K+
Sbjct: 342 FAVAPSLERWHSRLGHPSIPIVMKV 366
>emb|CAN77632.1| hypothetical protein VITISV_041497 [Vitis vinifera]
Length = 521
Score = 52.4 bits (124), Expect(2) = 8e-10
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P+ NL+S K T NCS+T +++GR + K + G +YH+T +SSP
Sbjct: 372 PECPFNLISISKITRTLNCSITFSDKFVTLQGRSTGKTIDIGRESQGLYHLTSDSSPAVC 431
Query: 254 SSIT*KALLYRRFGHLSFQTLRKI 183
S L++ R GH S +K+
Sbjct: 432 ISTDAPLLIHNRLGHPSLSKFQKM 455
Score = 38.5 bits (88), Expect(2) = 8e-10
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 SNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPP-ELLHMDLWGPCHFASISGNLY 1
S +S+ P C C+L + + F N K P EL+H D+WGPC AS G Y
Sbjct: 460 STLSSLP--CESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQY 513
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 42.7 bits (99), Expect(4) = 1e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 174 LELSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLW 40
L +SN K F C++C L +++K PF + ST+P E L++DLW
Sbjct: 445 LPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLW 489
Score = 33.9 bits (76), Expect(4) = 1e-09
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 658 AAADIFDAEEWIVDSGANNHITPDPSVLKESLPY 557
A A ++A W++DSGA +HIT D + L PY
Sbjct: 278 AIASPYNANNWLLDSGATHHITSDLNNLSLHQPY 311
Score = 30.8 bits (68), Expect(4) = 1e-09
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQA- 258
P NL+S ++ + N S+ F VK + L+QG K+++Y N +
Sbjct: 351 PNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPVNPPKPSS 410
Query: 257 -LSSIT*KALL---YRRFGHLSFQTLRKI 183
++ T K L + R GH S TL+ +
Sbjct: 411 HFTTTTPKTDLTSWHSRLGHPSLSTLKVV 439
Score = 21.2 bits (43), Expect(4) = 1e-09
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 549 GSEIINTSNG*VMSITHTGTS 487
G E + ++G +SI+HTG++
Sbjct: 313 GGEDVTIADGSGLSISHTGSA 333
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 49.7 bits (117), Expect(2) = 1e-09
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
PQA NL+S H+ + N+ L L F +K +I+RK L++G +Y + +S QA
Sbjct: 384 PQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPLPHSSLKQAY 443
Query: 254 SSIT*KALL---YRRFGHLSFQTLRKICN 177
S+I K L + R GH S T++++ N
Sbjct: 444 SAI--KLSLDRWHHRLGHPSITTVKQVVN 470
Score = 40.4 bits (93), Expect(2) = 1e-09
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -1
Query: 186 NL*CLELSNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGP 34
+L C +LS+ S +C C+ +S++ PF S +VS P EL+ D+WGP
Sbjct: 473 SLPCSDLSSES----VCNACQQAKSHQLPFPISSSVSKHPLELVFSDVWGP 519
>emb|CAN80469.1| hypothetical protein VITISV_008623 [Vitis vinifera]
Length = 1041
Score = 51.6 bits (122), Expect(2) = 1e-09
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P+ NL+S K T NCS+T +++ R + K + G +YH+T +SSP
Sbjct: 245 PECPFNLISISKITRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLTSDSSPAVC 304
Query: 254 SSIT*KALLYRRFGHLSFQTLRKI 183
SI L++ R GH S +K+
Sbjct: 305 ISIDAPLLIHNRLGHPSLSKFQKM 328
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 SNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPP-ELLHMDLWGPCHFASISGNLY 1
S +S+ P C C+L + + F N K P EL+H D+WGPC AS G Y
Sbjct: 333 STLSSLP--CESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQY 386
>ref|XP_008367623.1| PREDICTED: uncharacterized protein LOC103431265 [Malus domestica]
Length = 1110
Score = 45.4 bits (106), Expect(2) = 2e-09
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSP--- 264
P HNLLS ++F N+CSL L F+VK S + +GP + Y F+SS
Sbjct: 630 PALKHNLLSANQFLLDNHCSLHLYPSHFTVKDLSSGRXRFKGPVQQGFYPFHFSSSATGN 689
Query: 263 -QALSSIT*KA---LLYRRFGHLSFQTLRKICN 177
+AL++ T KA + ++R GH S + L K+ +
Sbjct: 690 HKALTA-TAKASTDVWHQRLGHPSVKILHKLAS 721
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1
Query: 138 CTECKLCRSYKFPFQ*SCNVSTKPPELLHMDLWGPCHFASISGNLY 1
C++C L +S K PF S ++KP EL+H D+WGP S G Y
Sbjct: 736 CSDCALAKSSKLPFVFSSCTTSKPLELVHTDVWGPSPQXSSQGFXY 781
>emb|CAN73074.1| hypothetical protein VITISV_032386 [Vitis vinifera]
Length = 1195
Score = 49.7 bits (117), Expect(2) = 4e-09
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = -2
Query: 434 PQASHNLLSTHKFTSGNNCSLTLDSHGFSVKGRISRKILVQGPHKNDMYHITFNSSPQAL 255
P+ NL+S K T NCS+T +++ R + K + G +YH+T +SSP
Sbjct: 334 PECPFNLISISKITRTLNCSITFSDKFVTLQDRSTGKTIGIGRESQGLYHLTSDSSPAVC 393
Query: 254 SSIT*KALLYRRFGHLSFQTLRKI 183
S L++ R GH S +K+
Sbjct: 394 ISTDAPLLIHNRLGHPSLSKFQKM 417
Score = 38.9 bits (89), Expect(2) = 4e-09
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 165 SNVSNKPFLCTECKLCRSYKFPFQ*SCNVSTKPP-ELLHMDLWGPCHFASISGNLY 1
S +S+ P C C+L + + F N K P EL+H D+WGPC AS G Y
Sbjct: 422 STLSSLP--CESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRXASTLGFQY 475