BLASTX nr result

ID: Papaver31_contig00050768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00050768
         (622 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, part...    67   8e-09
ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein A...    61   6e-07
ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein A...    50   4e-06
ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413...    57   6e-06
ref|XP_008392821.1| PREDICTED: putative ribonuclease H protein A...    57   8e-06
ref|XP_008226959.1| PREDICTED: putative ribonuclease H protein A...    57   8e-06

>ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
           gi|462415876|gb|EMJ20613.1| hypothetical protein
           PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
 Frame = -2

Query: 600 YKSGNLSGKVISYWITSWFNDA------QQDLIVFAGFSLWHIWKMRCACVFDNAQVQID 439
           Y+  N S      W+ S F         +  L+    F LW IWK RC  V +  Q+   
Sbjct: 310 YRVHNQSITTFDNWLNSMFQLNLTSILDRNRLMTIISFILWEIWKARCKFVIEGRQLHPI 369

Query: 438 HLVRQIHQDINEWVNVNRRNTPTVHTVQTNENGNVWKLPCGGFVKINFDASFIKETKKMG 259
           H++ Q  +  NE++  N   + T     T  +   W  P  GFVK+N DA++IKE+ +  
Sbjct: 370 HVLHQAMRAANEFIEANVSQS-THSDYVTLISTRAWTPPSDGFVKVNTDAAWIKESNRSA 428

Query: 258 VGLTMFDDTRT*RGS 214
           VG+ + D     RG+
Sbjct: 429 VGVVIRDSAGNVRGA 443


>ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 1128

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -2

Query: 501  LWHIWKMRCACVFDNAQVQIDHLVRQIHQDINEWVNVNRRNT----PTVHTVQTNENGNV 334
            LW IWK R   +F N Q+   H+++Q  +D  EW   +  N     P + + QT      
Sbjct: 907  LWRIWKSRNLLIFQNKQIDGRHVLQQARRDAQEWSTHSTLNVSSGRPNISSQQTLMQNQR 966

Query: 333  WKLPCGGFVKINFDASFIKETKKMGVGLTMFDDTRT*RGS 214
            WK P  G++K N DASF+        G  + D+  T +G+
Sbjct: 967  WKRPPVGWLKCNVDASFVNAETPSKAGWIIRDENGTYKGA 1006


>ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 866

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = -2

Query: 501 LWHIWKMRCACVFDNAQVQIDHLVRQIHQDINEWVNVNRRNT---PTVHTVQTNENGNVW 331
           LW IWK R   +F        +L++  +QD  EW+   +      P       N   N W
Sbjct: 647 LWRIWKDRNKMIFQQKLTHWRYLLQAAYQDTKEWMEAQQFTEEVQPGQPRRSPNSKRNEW 706

Query: 330 KLPCGGFVKINFDASFIKETKKMGVGLTMFDDTRT*RGS 214
           K P  GFVK N+D SF         G  + D T   +G+
Sbjct: 707 KRPEMGFVKCNYDGSFYNINTPAQAGWLIRDSTGLFKGA 745



 Score = 27.3 bits (59), Expect(2) = 4e-06
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -3

Query: 134 RGVQKLEIKGDSLNVVNAIRSNTESISWKN 45
           +G  K+  +GD++NV+N ++  T++I+  N
Sbjct: 774 QGYTKVIFEGDNINVINLLKKRTKNINVVN 803


>ref|XP_013709827.1| PREDICTED: uncharacterized protein LOC106413636 [Brassica napus]
          Length = 1521

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 15/143 (10%)
 Frame = -2

Query: 621  C*FTKEYYKSGNLSGKVISYWITSWFNDAQQDLIVFAGFS------------LWHIWKMR 478
            C + K  +++  L   VI+   TS F D  Q+ I     +            LW +WK R
Sbjct: 1102 CPYAKMIWRTSGLDNAVINS-STSSFEDKIQECINIGTSTRLIHFQDQPIWILWRLWKSR 1160

Query: 477  CACVFDNAQVQIDHLVRQIHQDINEWVNVNRR---NTPTVHTVQTNENGNVWKLPCGGFV 307
               +F    +    L+RQ  +D  EW +  R    +T     +        W  P  G++
Sbjct: 1161 NMLIFQQKDIPWRTLIRQSREDAKEWFDTTRNIGLSTQQGRNISARSRDTRWAKPPRGWM 1220

Query: 306  KINFDASFIKETKKMGVGLTMFD 238
            KIN D SFI  T K   G  + D
Sbjct: 1221 KINVDGSFINNTMKSKAGWVLRD 1243


>ref|XP_008392821.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 451

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
 Frame = -2

Query: 621 C*FTKEYYKSGNLSGKVISYWITSWFN-------------DAQQDLIVFAGFSLWHIWKM 481
           C + KE +  G L+  +    +T+W N               + +L+ +   + W IWK 
Sbjct: 178 CSWVKEVWLGGRLTRGLWRGAVTNWANWLGDIVGSVNGQISVRHNLLSYVATTCWFIWKA 237

Query: 480 RCACVFDNAQVQIDHLVRQIHQDINEWVNVNRRNTPTVHTVQTNENGN----VWKLPCGG 313
           RC  +F+   +    ++  I Q +  +    +    TV  +  + NG+    +W  PC G
Sbjct: 238 RCNFLFNQQPIVPRQIIAVITQSVAAFKEYTQA---TVSCLPISVNGSASDVLWSPPCVG 294

Query: 312 FVKINFDASFIKETKKMGVGLTMFDD 235
           F+KIN DAS+++      VG+   DD
Sbjct: 295 FIKINVDASWLRSGDAGFVGVVARDD 320


>ref|XP_008226959.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 370

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
 Frame = -2

Query: 525 LIVFAGFSLWHIWKMRCACVFDNAQVQIDHLVRQIHQDINEWVNVN--------RRNTPT 370
           ++    F LW IWK R A VF    VQ  + V  + + ++E+  V+        +R  P+
Sbjct: 160 VLQLVAFVLWRIWKCRNALVFTGVLVQPCYAVAVLLKQVDEFNEVHTMEQTQLQQRGVPS 219

Query: 369 VHTVQTNENGNVWKLPCGGFVKINFDASFIKETKKMGVGLTMFD 238
            +     E G+ W  P  GFVK+N D  +  +T+K+GVG  + D
Sbjct: 220 GYI---GEAGSAWSCPPSGFVKLNCDGEWEAQTRKLGVGWVLRD 260


Top