BLASTX nr result

ID: Papaver31_contig00050671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00050671
         (604 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein A...    62   2e-07
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    62   3e-07
ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307...    60   9e-07
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    60   1e-06
ref|XP_008340288.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418...    58   3e-06
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A...    57   6e-06

>ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 389

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
 Frame = -2

Query: 579 KLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVASSC 400
           K  +I   +WL PP   +    +G A G PG    G V RD TG  +G  S  LG  +S 
Sbjct: 212 KAPSIVPVLWLPPPFSWVKVNTDGLAKGNPGPAACGGVFRDSTGYFLGGFSLSLGHRTSF 271

Query: 399 ITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQGIV--PWSLKARWLQDTSRL-NQ 229
             +  +VI  IE A      N+ + +DS +V++ F  G    PWSL+ RW   T  L N 
Sbjct: 272 YAELHAVILAIELAHARGWKNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLHLQNM 331

Query: 228 VF-YEYCYKEVNFSSIILARRG 166
           VF   + ++E N  +  LA  G
Sbjct: 332 VFRCSHIFREGNVVADKLANLG 353


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
 Frame = -2

Query: 603 FKLGDRGSKLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISG 424
           F +  +  ++T   + +W  P  DI+   C+G ++G       GIV RD     +G IS 
Sbjct: 36  FNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISS 95

Query: 423 GLGVASSCITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQGI-VPWSLKARWLQD 247
            +G A+    +  + +  +E A  +Q  ++ + TDS  V+  F +G+ VPW ++ARW   
Sbjct: 96  NIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARW--- 152

Query: 246 TSRLNQVFYEYCYKEVNFSSIILARRG 166
                Q  +++C   ++ S + + R G
Sbjct: 153 -----QNCWDFC-DSISCSCVHILREG 173


>ref|XP_011470669.1| PREDICTED: uncharacterized protein LOC101307646 [Fragaria vesca
            subsp. vesca]
          Length = 796

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
 Frame = -2

Query: 588  RGSKLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVA 409
            R  ++  + E +W  P    +    +G    E G+ GFG V R Y G+ +G  +  + + 
Sbjct: 620  RSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHIDIP 679

Query: 408  SSCITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQ-GIVPWSLKARWLQDTSRLN 232
            SS   K   VI  IE A      ++ +  D  TVL   +   +VPW L+ RWL    R++
Sbjct: 680  SSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPSLVPWQLRVRWLNCLYRIS 739

Query: 231  QVFYE--YCYKEVNFSSIILARRG 166
             + ++  + ++E N  +  LA  G
Sbjct: 740  TMTFKSSHIFREGNRVADALANHG 763


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
 Frame = -2

Query: 582  SKLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVASS 403
            S+ T +    W  PP   +    +G A+  PG  G G V R++ G++I   S  LG  ++
Sbjct: 1060 SQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTN 1119

Query: 402  CITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQG-IVPWSLKARWLQDTSRLNQV 226
               +  + I+ I W   ++ N +I+  DS+ ++  F+   ++PW++ ++  Q      Q+
Sbjct: 1120 NQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNISSQMQQLHQLATQL 1179

Query: 225  FYEYC---YKEVNFSSIILARRGAQNPMGEI 142
             +  C   ++E NF + +L++   Q P  +I
Sbjct: 1180 DHFKCIHTFREANFVADVLSKHSHQIPNPQI 1210


>ref|XP_008340288.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 364

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
 Frame = -2

Query: 579 KLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVASSC 400
           K  +I   +W  PP   +    +G A G PG    G V RD TG  +G  S  LG  +S 
Sbjct: 187 KAHSIVPVLWHPPPSSWVKVNTDGLAKGNPGPAACGGVFRDSTGYFLGGFSLSLGHRTSF 246

Query: 399 ITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQGIV--PWSLKARWLQDTSRL-NQ 229
             +  +VI  +E A      N+ + +DS +V++ F  G    PWSL+ RW   T  L N 
Sbjct: 247 YAELHAVILAVELAHARGWQNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLLLQNM 306

Query: 228 VF-YEYCYKEVNFSSIILARRG 166
           VF   + ++E N  +  LA  G
Sbjct: 307 VFRCSHIFREGNVVADKLANLG 328


>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
          Length = 1384

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
 Frame = -2

Query: 579  KLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVASSC 400
            K  +I    W  PP   +    +G A G PG    G V RD  G  +G  S  LG  +S 
Sbjct: 1207 KAPSIVPVXWHXPPFSWVKVNTDGLAKGNPGPAACGGVXRDSAGYFLGGFSLSLGHRTSF 1266

Query: 399  ITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQGIV--PWSLKARWLQDTSRLNQV 226
              +  +VI  +E A      N+ + +DS +V++ F  G    PWSL+ RW   T  L  +
Sbjct: 1267 YAELHAVILAVELAHARGWQNLWLESDSSSVISCFAXGSFSPPWSLQTRWNNCTLHLQNM 1326

Query: 225  FY--EYCYKEVNFSSIILARRG 166
             +   + ++E N  +  LA  G
Sbjct: 1327 XFRCSHIFREXNVVADKLANLG 1348


>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 591

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 4/142 (2%)
 Frame = -2

Query: 579 KLTTIKECVWLLPPKDILLF*CNGFAIGEPGLEGFGIVARDYTGKVIGTISGGLGVASSC 400
           K  +I   +W  PP   +    +G A G PG    G V RD  G  +G  S  LG  +S 
Sbjct: 414 KAPSIVPVLWHPPPSSWVKVNTDGLAKGNPGPAACGGVFRDSAGYFLGGFSLSLGHRTSF 473

Query: 399 ITKSFSVIWDIEWAGTLQCNNIIIRTDSKTVLTDFQQGIV--PWSLKARWLQDTSRL-NQ 229
             +  +VI  +E A      N+ + +DS +V++ F  G    PWSL+ RW   T  L N 
Sbjct: 474 YAELHAVILAVELAHARGWQNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLLLQNM 533

Query: 228 VF-YEYCYKEVNFSSIILARRG 166
           VF   + ++E N  +  LA  G
Sbjct: 534 VFRCSHIFREGNAVADKLANLG 555


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