BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00049221
         (478 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]     49   3e-06
ref|XP_009113456.1| PREDICTED: uncharacterized protein LOC103838...    49   9e-06

>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
          Length = 1836

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
 Frame = -2

Query: 354  ETIYHIFFNCAAVVPIWLKLKNLTGFDLILEEMSPSFIRKIC-SFKGKICGVEWSCLIPF 178
            ETI H+F +C   V  W      T F          ++ K C S +    G+ W  + P+
Sbjct: 1556 ETIDHLFRSCDVAVNCWEAAAPPTAFMYSFHLPVTVWMEKSCASNQTNGRGISWRLIFPY 1615

Query: 177  VLWVIWVGRNDLIHNKVNFHPLKQLDVAIRRCREFYFFNLMNMTSVTKNEIMVSWRFPR 1
            +LW +W GRN+ + N V  +    + +A +   E   F L +   +   ++ + W  P+
Sbjct: 1616 ILWNMWKGRNNQVFNNVCTNGNAIVKIAEQEASEAQRFLLPHAGPLRARQLWIPWSPPQ 1674



 Score = 28.5 bits (62), Expect(2) = 3e-06
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 475  CPQKIKVFLCKLSHKRLNLNEPLYRKGVVSSPGCSFC 365
            C +K+K+F+ K+    L  N    R+G++ +  C  C
Sbjct: 1515 CVEKVKLFIWKIMENGLLTNSERRRRGLLEAATCPSC 1551


>ref|XP_009113456.1| PREDICTED: uncharacterized protein LOC103838755 [Brassica rapa]
          Length = 1143

 Score = 49.3 bits (116), Expect(2) = 9e-06
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
 Frame = -2

Query: 354  ETIYHIFFNCAAVVPIWLKLKNLTGFDLILEEMSPSFIRKICSFKGKIC----GVEWSCL 187
            ET+ HIFFNC     +W  +       +  E+   S + K   F+  +C    GV+ + +
Sbjct: 873  ETVMHIFFNCTFARKVWEAVPLRQAIPISAEDTITSMMVK---FRRALCLPPTGVQ-NPI 928

Query: 186  IPFVLWVIWVGRNDLIHNKVNFHPLKQLDVAIRRCREF 73
            +P++LW IW  RN L+    N  P +     IR  RE+
Sbjct: 929  LPWILWSIWTARNKLLFEDRNMPPEEIASGGIRLAREW 966



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 466 KIKVFLCKLSHKRLNLNEPLYRKGVVSSPGCSFCQ 362
           K+KVFL     K L   E L  +G+ S   C  C+
Sbjct: 836 KLKVFLWSTIQKALPTGENLQNRGITSDLTCPRCK 870