BLASTX nr result
ID: Papaver31_contig00048772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00048772
(642 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II su... 94 9e-17
gb|ERM93641.1| hypothetical protein AMTR_s00004p00150370 [Ambore... 93 1e-16
ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II su... 92 3e-16
ref|XP_010934577.1| PREDICTED: DNA-directed RNA polymerase II su... 91 4e-16
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 91 6e-16
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 91 6e-16
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 91 6e-16
ref|XP_008809800.1| PREDICTED: DNA-directed RNA polymerase II su... 90 1e-15
ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II su... 89 2e-15
ref|XP_011626898.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 89 2e-15
ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II su... 89 3e-15
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 89 3e-15
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 89 3e-15
gb|KNA07108.1| hypothetical protein SOVF_174890 [Spinacia oleracea] 88 5e-15
gb|KHF99091.1| DNA-directed RNA polymerase II subunit RPB7 [Goss... 88 5e-15
gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria ital... 87 8e-15
gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subu... 87 8e-15
emb|CDP09113.1| unnamed protein product [Coffea canephora] 87 8e-15
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype... 87 8e-15
ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Th... 87 8e-15
>ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082116|ref|XP_010242493.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera] gi|720082119|ref|XP_010242494.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
nucifera]
Length = 177
Score = 93.6 bits (231), Expect = 9e-17
Identities = 62/138 (44%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGPNLRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>gb|ERM93641.1| hypothetical protein AMTR_s00004p00150370 [Amborella trichopoda]
Length = 147
Score = 93.2 bits (230), Expect = 1e-16
Identities = 57/115 (49%), Positives = 68/115 (59%), Gaps = 26/115 (22%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKL+AKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLIAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLLKGRYLKLRLPWLLIPEDMEIQAGDIPNYSTSDRSVTPVKIQKDSGVR 1
P+ F + +++ + LIP+DME Q+GD+PNY TSD S VKIQKDS VR
Sbjct: 69 PMGF--FAEAGPVQIFVSNHLIPDDMEFQSGDVPNYMTSDGS---VKIQKDSEVR 118
>ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 isoform X2
[Musa acuminata subsp. malaccensis]
Length = 177
Score = 92.0 bits (227), Expect = 3e-16
Identities = 61/138 (44%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|XP_010934577.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Elaeis
guineensis]
Length = 177
Score = 91.3 bits (225), Expect = 4e-16
Identities = 61/138 (44%), Positives = 72/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDL----LKGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ + KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVAFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7
[Brachypodium distachyon] gi|944070871|gb|KQK06355.1|
hypothetical protein BRADI_2g25940 [Brachypodium
distachyon]
Length = 177
Score = 90.9 bits (224), Expect = 6e-16
Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQK+S VR
Sbjct: 129 TSDGS---VKIQKESEVR 143
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 90.9 bits (224), Expect = 6e-16
Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 68 RNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 127
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 128 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 187
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQK+S VR
Sbjct: 188 TSDGS---VKIQKESEVR 202
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 90.9 bits (224), Expect = 6e-16
Identities = 60/138 (43%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQK+S VR
Sbjct: 129 TSDGS---VKIQKESEVR 143
>ref|XP_008809800.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Phoenix
dactylifera]
Length = 177
Score = 89.7 bits (221), Expect = 1e-15
Identities = 60/138 (43%), Positives = 72/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LR+KLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLREKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDL----LKGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ + KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVAFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747084765|ref|XP_011089806.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085755|ref|XP_011090351.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085757|ref|XP_011090352.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085759|ref|XP_011090354.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum] gi|747085761|ref|XP_011090355.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7 [Sesamum
indicum]
Length = 177
Score = 89.4 bits (220), Expect = 2e-15
Identities = 61/138 (44%), Positives = 72/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFG +LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GDIPNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|XP_011626898.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB7 [Amborella trichopoda]
Length = 184
Score = 89.0 bits (219), Expect = 2e-15
Identities = 60/145 (41%), Positives = 72/145 (49%), Gaps = 56/145 (38%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKL+AKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPHLRDKLIAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL--------------------------LIPEDMEIQA 76
P+K+ ++ KG L+ + + LIP+DME Q+
Sbjct: 69 PVKYQCVVFRPFKGEILEAXVRMVTWKILXYVQMGFFAEAGPVQIFVSNHLIPDDMEFQS 128
Query: 75 GDIPNYSTSDRSVTPVKIQKDSGVR 1
GD+PNY TSD S VKIQKDS VR
Sbjct: 129 GDVPNYMTSDGS---VKIQKDSEVR 150
>ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Elaeis guineensis]
Length = 177
Score = 88.6 bits (218), Expect = 3e-15
Identities = 60/138 (43%), Positives = 72/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQL PRHFGP+LRDKLVAKLMKDVEGT FV F
Sbjct: 9 RNMQLQPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 88.6 bits (218), Expect = 3e-15
Identities = 58/138 (42%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLV+KL+KDVEGT +V F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
gi|937918996|dbj|BAS93914.1| Os05g0400700 [Oryza sativa
Japonica Group]
Length = 177
Score = 88.6 bits (218), Expect = 3e-15
Identities = 58/138 (42%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLV+KL+KDVEGT +V F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIREGTGYVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>gb|KNA07108.1| hypothetical protein SOVF_174890 [Spinacia oleracea]
Length = 177
Score = 87.8 bits (216), Expect = 5e-15
Identities = 59/138 (42%), Positives = 70/138 (50%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP LRDKLV+KLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGPRLRDKLVSKLMKDVEGTCSGRHGFVVAIMGIEHVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+ D PNY+
Sbjct: 69 PVKYKCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQVFVSNHLIPDDMEFQSADTPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDNS---VKIQKDSEVR 143
>gb|KHF99091.1| DNA-directed RNA polymerase II subunit RPB7 [Gossypium arboreum]
Length = 173
Score = 87.8 bits (216), Expect = 5e-15
Identities = 58/135 (42%), Positives = 71/135 (52%), Gaps = 46/135 (34%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFG NLR+ LV+KLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL----------------LIPEDMEIQAGDIPNYSTSD 46
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+TSD
Sbjct: 69 PVKYQCVVFRPFKGEILEAAVTMMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSD 128
Query: 45 RSVTPVKIQKDSGVR 1
S VKIQKDS VR
Sbjct: 129 GS---VKIQKDSEVR 140
>gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria italica]
Length = 283
Score = 87.0 bits (214), Expect = 8e-15
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLV+KL+KDVEGT +V F
Sbjct: 115 RNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTF 174
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 175 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 234
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQK+S VR
Sbjct: 235 TSDGS---VKIQKESEVR 249
>gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subunit [Erodium
trifolium]
Length = 176
Score = 87.0 bits (214), Expect = 8e-15
Identities = 59/138 (42%), Positives = 71/138 (51%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFG NLR+ LVAKLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDSS---VKIQKDSEVR 143
>emb|CDP09113.1| unnamed protein product [Coffea canephora]
Length = 177
Score = 87.0 bits (214), Expect = 8e-15
Identities = 59/138 (42%), Positives = 72/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFG +LRDKLV+KLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGRDLRDKLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQKDS VR
Sbjct: 129 TSDGS---VKIQKDSEVR 143
>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
gi|242056199|ref|XP_002457245.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|242090461|ref|XP_002441063.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7 [Setaria italica]
gi|194708012|gb|ACF88090.1| unknown [Zea mays]
gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|241929220|gb|EES02365.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|241946348|gb|EES19493.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 177
Score = 87.0 bits (214), Expect = 8e-15
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 49/138 (35%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFGP+LRDKLV+KL+KDVEGT +V F
Sbjct: 9 RNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL-------------------LIPEDMEIQAGDIPNYS 55
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+
Sbjct: 69 PVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYT 128
Query: 54 TSDRSVTPVKIQKDSGVR 1
TSD S VKIQK+S VR
Sbjct: 129 TSDGS---VKIQKESEVR 143
>ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Theobroma cacao]
gi|508786662|gb|EOY33918.1| DNA-directed RNA polymerase
II isoform 3 [Theobroma cacao]
Length = 173
Score = 87.0 bits (214), Expect = 8e-15
Identities = 58/135 (42%), Positives = 71/135 (52%), Gaps = 46/135 (34%)
Frame = -1
Query: 267 RNMQLHPRHFGPNLRDKLVAKLMKDVEGTW--------------------------FVAF 166
RNMQLHPRHFG NLR+ LV+KLMKDVEGT FV F
Sbjct: 9 RNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTF 68
Query: 165 PIKFSDLL----KGRYLKLRLPWL----------------LIPEDMEIQAGDIPNYSTSD 46
P+K+ ++ KG L+ + + LIP+DME Q+GD+PNY+TSD
Sbjct: 69 PVKYQCVVFRPFKGEVLEAVVTMMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSD 128
Query: 45 RSVTPVKIQKDSGVR 1
S VKIQKDS VR
Sbjct: 129 GS---VKIQKDSEVR 140