BLASTX nr result
ID: Papaver31_contig00048533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00048533
(712 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013625423.1| PREDICTED: uncharacterized protein LOC106331... 82 3e-13
ref|XP_013709144.1| PREDICTED: uncharacterized protein LOC106412... 82 4e-13
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 80 1e-12
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 80 1e-12
ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein A... 80 2e-12
ref|XP_007015523.1| Uncharacterized protein TCM_041125 [Theobrom... 79 4e-12
ref|XP_012080090.1| PREDICTED: uncharacterized protein LOC105640... 78 5e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 78 5e-12
ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein A... 78 6e-12
ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein A... 78 6e-12
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418... 77 8e-12
ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362... 77 1e-11
ref|XP_009144970.1| PREDICTED: putative ribonuclease H protein A... 77 1e-11
ref|XP_009138589.1| PREDICTED: putative ribonuclease H protein A... 77 1e-11
ref|XP_009129273.1| PREDICTED: putative ribonuclease H protein A... 77 1e-11
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A... 77 1e-11
ref|XP_013594814.1| PREDICTED: uncharacterized protein LOC106302... 76 2e-11
ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444... 76 2e-11
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali... 76 2e-11
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali... 76 2e-11
>ref|XP_013625423.1| PREDICTED: uncharacterized protein LOC106331580 [Brassica oleracea
var. oleracea]
Length = 304
Score = 82.0 bits (201), Expect = 3e-13
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 5/231 (2%)
Frame = -3
Query: 686 RIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTT 507
R H++ C +C DTE NH+L CP L LS P T + +
Sbjct: 3 RKHISKEAGCYKCRYDTETINHVLFQCPLAR-----LVWALSPIP-TPPDGVMVQSLYSN 56
Query: 506 ISQIL----QQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSW 339
I +L + P +L W LW +RN L++ K+ +E I+ A++ +E+
Sbjct: 57 IYHVLNVQKEYPIEDIQAEIAPWLMWRLWKNRNELVFNGKEYEAECIIRKAREDAEEWKG 116
Query: 338 AQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFI 159
+ ++ T + IT + W P NW+K N+DGA +G G+I
Sbjct: 117 RK------VAEETAVKRLEVQQPTITNQANPWRPPPSNWVKCNSDGAWHNERDTSGLGWI 170
Query: 158 CRDSDARTIIAMAQPLGIT-TALTAETWAFLLASKTASERKWPRILFETDS 9
CR+ + A A+ + T +A+ AE A ++T + + I+FETDS
Sbjct: 171 CRNETGEVLWAGARAVTKTGSAILAEAEALKWGAETLANFGYKNIIFETDS 221
>ref|XP_013709144.1| PREDICTED: uncharacterized protein LOC106412794 [Brassica napus]
Length = 310
Score = 81.6 bits (200), Expect = 4e-13
Identities = 71/238 (29%), Positives = 101/238 (42%), Gaps = 5/238 (2%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHA 531
L T S L R H+ C RC + E HL CP + +SN +HT
Sbjct: 6 LATDSSLQRRHIIRDGQCRRCCSALETEKHLFFECPYAQKIWRR--SGISNIIINSHTAT 63
Query: 530 FTLTPQTTISQILQQPTSTSTI---SSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQK 360
F + I LQ TST I + ++ W +W SRN LI+QQK E IL AQ
Sbjct: 64 F----EEKIDACLQYSTSTRLIHYQNLPIWILWRIWKSRNVLIFQQKSIYWERILQQAQA 119
Query: 359 LQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPG 180
+E+S + I G N T GW P WIK N DG+
Sbjct: 120 DGKEWSLHNNDQTRSIYG---NANGRSTQG-------GWRKPPQGWIKCNVDGSYSAQQQ 169
Query: 179 FAGAGFICRDSDARTIIAMAQPLG--ITTALTAETWAFLLASKTASERKWPRILFETD 12
+ AG++ RDS+ T Q G + A +E A ++A + +++ ++ FE+D
Sbjct: 170 TSKAGWVIRDSNG-TYKGAGQANGNHVNNAFESEIQALIIAMQNCWSKRYMKVQFESD 226
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 80.5 bits (197), Expect = 1e-12
Identities = 66/239 (27%), Positives = 99/239 (41%), Gaps = 4/239 (1%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHA 531
L T S R L + CP C T+ E +HL C + P T ++
Sbjct: 1531 LLTNSERRRRGLLEAATCPSCGTNDETIDHLFRSCDVAVNCWE------AAAPPTAFMYS 1584
Query: 530 FTLTPQTTISQ-ILQQPTSTSTIS---SFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQ 363
F L + + T+ IS F ++ W +W RNN ++ T I+ A+
Sbjct: 1585 FHLPVTVWMEKSCASNQTNGRGISWRLIFPYILWNMWKGRNNQVFNNVCTNGNAIVKIAE 1644
Query: 362 KLQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHP 183
QE S AQ ++ A P R + + WS P ++K+N+DGA + +
Sbjct: 1645 ---QEASEAQRF---LLPHAGPL--------RARQLWIPWSPPQPGFVKMNSDGAMKANS 1690
Query: 182 GFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKWPRILFETDSE 6
G A AG + RD I+ + +G T + AE W F A R + I+ ETDSE
Sbjct: 1691 GMASAGGLLRDHMGNWIVGFSTNIGHTNSFLAELWGFREGLVIAKNRGYNHIIAETDSE 1749
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 80.5 bits (197), Expect = 1e-12
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Frame = -3
Query: 449 LFWTLWLSRNNLIYQQK---QTTSEEILAWAQKL-QQEYSWAQHASPPIISGATPTVNHT 282
+ WTLW RN L + + E ++ +K+ + ++ W ++ + +
Sbjct: 631 IMWTLWKRRNALKHDSSISWERMVEMVIEVVRKMVKSQFPWIKN-----MRWTWQAIIQR 685
Query: 281 LTD--KRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLG 108
L ++I + V W P+ +++K NTDGA RG+PG + GF RD I A A+ +G
Sbjct: 686 LNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIG 745
Query: 107 ITTALTAETWAFLLASKTASERKWPRILFETDS 9
I T + AET A L A + S RK +++ ETDS
Sbjct: 746 IATNMEAETVAILTALRECSNRKMQKVIIETDS 778
>ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 900
Score = 79.7 bits (195), Expect = 2e-12
Identities = 67/243 (27%), Positives = 103/243 (42%), Gaps = 8/243 (3%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCP------TTTTS*NILFNQLSNTPN 549
L T + L R H+ +D C RC E A+H+ CP + N++ N S+T
Sbjct: 596 LATGNNLKRRHIIQNDQCRRCCLAIETADHIFFECPYAKIIWRASGVSNLIINNSSSTLE 655
Query: 548 TNHTHAFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAW 369
+ T +S + P +L W +W SRN LI++QK+ +L +
Sbjct: 656 EKIEACLQCSLSTRLSHMQDLPF---------WLLWRIWKSRNTLIFRQKEIPWRSLLRY 706
Query: 368 AQKLQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARG 189
A++ +E W Q + +H LT+ + W P I WIK NTDGA
Sbjct: 707 AREDAKE--WKQLDNKGEEGHLRRRQSHHLTE------CLHWKKPMIGWIKCNTDGAYNS 758
Query: 188 HPGFAGAGFICRDSDARTIIAMAQPLGIT--TALTAETWAFLLASKTASERKWPRILFET 15
AG++ RD + AQ G T AL E A L+A + + +I+ E+
Sbjct: 759 TQHQTSAGWVIRDENG-IYKGSAQARGRTRNDALECELQAILMALQHCWSLGYRKIIMES 817
Query: 14 DSE 6
D +
Sbjct: 818 DCQ 820
>ref|XP_007015523.1| Uncharacterized protein TCM_041125 [Theobroma cacao]
gi|508785886|gb|EOY33142.1| Uncharacterized protein
TCM_041125 [Theobroma cacao]
Length = 432
Score = 78.6 bits (192), Expect = 4e-12
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Frame = -3
Query: 458 FCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWAQ--HASPPIIS-GATPTVN 288
F + WT+WLSRN L ++ K E+I + ++ A+ P ++S P V
Sbjct: 261 FFTISWTIWLSRNELTFKGKSWDPEQIFDLVKLRVASWAAAKWPEEHPNVLSLFCQPKVQ 320
Query: 287 HTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLG 108
T DK+ T +S+ W P W+K N DGAARG G A G + R+ + ++ +G
Sbjct: 321 VTKKDKKKTRVSIEWKKPEHGWMKFNVDGAARGSLGEASIGGVLRNCQGEIKVIFSKLIG 380
Query: 107 ITTALTAE----TWAFLLASKTASERKWPRILFETDSEN 3
++ A TAE AFL+ S T RK ++ E+DS N
Sbjct: 381 VSDANTAEFLAIREAFLIFSAT-EWRKQISLVVESDSVN 418
>ref|XP_012080090.1| PREDICTED: uncharacterized protein LOC105640399 [Jatropha curcas]
Length = 340
Score = 78.2 bits (191), Expect = 5e-12
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Frame = -3
Query: 665 DICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTTISQILQQ 486
DICP C +E H+LI+CP S T F + + + QQ
Sbjct: 66 DICPLCLGHSETNLHVLINCP------------FSRQVWTLSHIGFRWSSALSFGEWFQQ 113
Query: 485 PTSTSTISSFCFLF---WTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWAQ----HA 327
+++ T+ + ++ W LW++RN+ +++QK ++ A + + A+ A
Sbjct: 114 ASTSLTLENLSYVSMVCWALWVTRNDTVWRQKSRNPRAVILLATGVWHAWKEAKLHDLGA 173
Query: 326 SPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFICRDS 147
P+ S NHT WS P NW+K+NTD + G+ G G + R+S
Sbjct: 174 PSPVFS------NHT------------WSPPPFNWLKVNTDASTGVASGYVGIGTVVRNS 215
Query: 146 DARTIIAMAQPL-GITTALTAETWAFLLASKTASERKWPRILFETDSEN 3
+ I + A G A AE A A + W IL ETDS++
Sbjct: 216 ASEFIASKAWRFPGYFNAKVAEAIAVREALSWIKDHGWNYILLETDSQS 264
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 78.2 bits (191), Expect = 5e-12
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 5/230 (2%)
Frame = -3
Query: 680 HLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTTIS 501
HL C RC + E NHLL CP + I + L P + +S
Sbjct: 1085 HLAREKSCVRCPSHGETVNHLLFKCPFARLTWAI--SPLPAPPGGEWAESLFRNMHHVLS 1142
Query: 500 QILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWAQHASP 321
QP + + ++ W LW +RN+L+++ ++ T+ +++ A + +W P
Sbjct: 1143 VHKSQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMD--AWNNRKEP 1200
Query: 320 PIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFICRDSDA 141
P V + D+ V W P+ W+K NTDGA G G G++ R+
Sbjct: 1201 Q------PQVTSSTRDR-----CVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTG 1249
Query: 140 RTI-----IAMAQPLGITTALTAETWAFLLASKTASERKWPRILFETDSE 6
R + +Q + T + A WA L + S + R++FE+DS+
Sbjct: 1250 RLLWLGLRALPSQQSVLETEVEALRWAVL----SLSRFNYRRVIFESDSQ 1295
>ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 577
Score = 77.8 bits (190), Expect = 6e-12
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 15/251 (5%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNT-PNTNHTH 534
LPT L R + + IC C+ ++E +HL C + L Q P T
Sbjct: 253 LPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAXRWLATQFGTIIPPTGSLS 312
Query: 533 AFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQ 354
L +S+ ++S FL +W RN + ++ K + +++ +
Sbjct: 313 DLWLD---FLSKRFSPHLRNXWLASGFFLLMAIWKMRNKVKFEGKPPS------FSRLCR 363
Query: 353 QEYSWAQHASPPIISGATPTVNHTLTDKRI--------------TTISVGWSVPNINWIK 216
+W + + TP + D+++ + + V W P +W+K
Sbjct: 364 STSAWIRQ-----VGALTPGHVRGILDRQLLVSLGISPNSCKAPSIVPVLWHPPPFSWVK 418
Query: 215 INTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKW 36
+NTDG A+G+PG A G I RDS + + LG T+ AE A +LA++ A R W
Sbjct: 419 VNTDGLAKGNPGLAACGGIFRDSAGYFLGGFSLSLGHRTSFYAELHAVILAAELAHARGW 478
Query: 35 PRILFETDSEN 3
+ E+DS +
Sbjct: 479 HNLWLESDSSS 489
>ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 389
Score = 77.8 bits (190), Expect = 6e-12
Identities = 63/251 (25%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNT-PNTNHTH 534
LPT L R + + IC C+ ++E +HL C + L Q T P T
Sbjct: 65 LPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQFGTTIPPTGSIS 124
Query: 533 AFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQ 354
L +S+ I+S FL +W RN + ++ K + + +
Sbjct: 125 DLWLV---FLSKQFSPHLRNVWIASGFFLLMAIWKMRNKVKFEGKPPSLSRLC------R 175
Query: 353 QEYSWAQHASPPIISGATPTVNHTLTDKRI--------------TTISVGWSVPNINWIK 216
+W + + TP + D+++ + + V W P +W+K
Sbjct: 176 STSAWIRQ-----VGALTPGHVRGILDRQLLVSLGISPNSCKAPSIVPVLWLPPPFSWVK 230
Query: 215 INTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKW 36
+NTDG A+G+PG A G + RDS + + LG T+ AE A +LA + A R W
Sbjct: 231 VNTDGLAKGNPGPAACGGVFRDSTGYFLGGFSLSLGHRTSFYAELHAVILAIELAHARGW 290
Query: 35 PRILFETDSEN 3
+ E+DS +
Sbjct: 291 KNLWLESDSSS 301
>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
Length = 1384
Score = 77.4 bits (189), Expect = 8e-12
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNT-PNTNHTH 534
LPT L R + + IC C+ ++E +HL C + L Q P T
Sbjct: 1060 LPTXDXLQRRGIPLAPICQLCHKNSESIDHLFSSCEFAXCAWXWLATQFGTIIPXTXSJS 1119
Query: 533 AFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQ 354
L +S+ ++S FL +W RN + ++ K + +++
Sbjct: 1120 DLXLV---FLSKRFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPS------FSRLCX 1170
Query: 353 QEYSWAQHASPPIISGATPTVNHTLTDKRI--------------TTISVGWSVPNINWIK 216
W + + TP + D+++ + + V W P +W+K
Sbjct: 1171 STSXWIRQ-----VGALTPXHVRGILDRQLLVSLGISPNSCKAPSIVPVXWHXPPFSWVK 1225
Query: 215 INTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKW 36
+NTDG A+G+PG A G + RDS + + LG T+ AE A +LA + A R W
Sbjct: 1226 VNTDGLAKGNPGPAACGGVXRDSAGYFLGGFSLSLGHRTSFYAELHAVILAVELAHARGW 1285
Query: 35 PRILFETDSEN 3
+ E+DS +
Sbjct: 1286 QNLWLESDSSS 1296
>ref|XP_013658143.1| PREDICTED: uncharacterized protein LOC106362852 [Brassica napus]
Length = 1350
Score = 76.6 bits (187), Expect = 1e-11
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHA 531
LPT L R H+T +C RC + E +HL +CP + +SN T+ T
Sbjct: 1044 LPTGENLKRRHVTQQALCRRCGLEDETEHHLFFNCPYAQCVWRA--SGISNMIITSTTTT 1101
Query: 530 FTLTPQTTISQILQQPTST--STISSF-CFLFWTLWLSRNNLIYQQKQTTSEEILAWAQK 360
F + I LQ TS S + ++ W LW SRN +I+QQK + ++ +A+
Sbjct: 1102 F----EEKIEACLQCSTSVRLSHLQDLPWWILWRLWKSRNQMIFQQKGYHWQNVIKYAKA 1157
Query: 359 LQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPG 180
E+ + ++ P N + R W P NW+K N DG+
Sbjct: 1158 DANEWKEVE-----MVQEELPRYNIPIRVPR----KHRWKQPAENWMKCNVDGSFINDHT 1208
Query: 179 FAGAGFICRDSDARTIIAM-AQPLGITTALTAETWAFLLASKTASERKWPRILFETDS 9
+ +G+I RD++ A+ A+ ++TAL E A L++ + + + RI+ E DS
Sbjct: 1209 PSNSGWILRDANGCYRGAVQAKGKRVSTALEGELQAILMSMQYCWSKGYRRIIIEGDS 1266
>ref|XP_009144970.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 448
Score = 76.6 bits (187), Expect = 1e-11
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 3/231 (1%)
Frame = -3
Query: 686 RIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTT 507
R HL+ + +CP C E H+L CP L+ +L P + FTL
Sbjct: 148 RRHLSENSVCPLCKGGDETILHVLRECPAAAG----LWIRL--VPISQQQRFFTLPLLEW 201
Query: 506 ISQIL--QQPT-STSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWA 336
+ + L ++P S + F W W R ++ + + + +K ++
Sbjct: 202 LFENLAKREPNWGDSWPTLFALTVWWCWKWRCGYVFGDEGKCRDRVKFLREKARE----- 256
Query: 335 QHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFIC 156
+ A + + + + W P WIKINTDGAA+G+PG A AG +
Sbjct: 257 -------VVVANDNLCGRSQGRERVEMQISWQKPASGWIKINTDGAAKGNPGLATAGGVL 309
Query: 155 RDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKWPRILFETDSEN 3
RD A +GI +A AE W A ER + R+ E DSE+
Sbjct: 310 RDEYGMWHGGFALNIGICSARMAELWGVYYGMCIAWERGFRRVELEVDSES 360
>ref|XP_009138589.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
Length = 739
Score = 76.6 bits (187), Expect = 1e-11
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 11/245 (4%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTT----------TTS*NILFNQLS 561
LP L R H+ C RC DTE NH+L CP I+ N L
Sbjct: 425 LPVAGNLARRHIAKEAGCLRCGCDTETVNHVLFQCPFARLVWALSPIPAPPEGIIMNSLY 484
Query: 560 NTPNTNHTHAFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEE 381
+ N HA + + P ++ W LW +RN L+++ K+ +
Sbjct: 485 S----NIYHALNIKKE--------YPREDIQAEIVPWILWRLWKNRNELLFKGKEFEAGS 532
Query: 380 ILAWAQKLQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDG 201
++ A++ ++ W I + T + T W P +W K N+DG
Sbjct: 533 LILKAREDLED--WQGRCQAEITAAEKNEAKRATTSVQTHT----WKPPPTDWFKCNSDG 586
Query: 200 AARGHPGFAGAGFICRDSDARTIIAMAQPL-GITTALTAETWAFLLASKTASERKWPRIL 24
A + +G G+ICRD+ + A A+ + + +++ E A ++T + + ++
Sbjct: 587 AWHQNRETSGLGWICRDASGHVLWAGARAVTKMDSSILTEAEALRWGAETLAGFGYKNVI 646
Query: 23 FETDS 9
FETDS
Sbjct: 647 FETDS 651
>ref|XP_009129273.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 310
Score = 76.6 bits (187), Expect = 1e-11
Identities = 72/244 (29%), Positives = 106/244 (43%), Gaps = 9/244 (3%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NI--LFNQLSNTPNTNHT 537
L T + L R H+T + +C RC E H+ CP + L N + N P
Sbjct: 6 LATGNNLRRRHITQNSLCRRCCNVEETEEHIFFGCPYAASIWRTSGLSNLIINNP----- 60
Query: 536 HAFTLTPQTTISQILQQPTSTSTISSF----CFLFWTLWLSRNNLIYQQKQTTSEEILAW 369
T T + I+ LQ ST ++ F ++ W LW SRN L++QQK + +L
Sbjct: 61 ---TATLEEKIAACLQYSFSTR-LTHFQDLPLWILWRLWKSRNILVFQQKDIPWKAVLRH 116
Query: 368 AQKLQQEYSWAQHASPPIISGATPTVNHTLTDKRITTI-SVGWSVPNINWIKINTDGAAR 192
A++ E W Q S T+ H TT + W P + WIK NTDG+ R
Sbjct: 117 AKEDANE--WKQ-------SDLLNTLYHHRRGGDTTTEENKRWKRPPLGWIKCNTDGSFR 167
Query: 191 GHPGFAGAGFICRDSDARTIIAMAQPLG--ITTALTAETWAFLLASKTASERKWPRILFE 18
A AG+I RD D Q G + AL +E A L+A + + +++ E
Sbjct: 168 QQLDDATAGWILRD-DNGVYKGSVQARGKRVQDALESELQAILMAIQHCWSLGYKQVIME 226
Query: 17 TDSE 6
+D +
Sbjct: 227 SDCQ 230
>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 591
Score = 76.6 bits (187), Expect = 1e-11
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNT-PNTNHTH 534
LPT L R + + IC C+ ++E +HL C + L Q P T
Sbjct: 267 LPTEDQLQRRGIPLAPICQLCHKNSESIBHLFSSCEFAQCAWRWLATQFGTXIPPTGSLS 326
Query: 533 AFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQ 354
L +S ++S FL +W RN + ++ K + +++ +
Sbjct: 327 DLWLV---FLSXXFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPS------FSRLCR 377
Query: 353 QEYSWAQHASPPIISGATPTVNHTLTDKRI--------------TTISVGWSVPNINWIK 216
+W + + TP + D+++ + + V W P +W+K
Sbjct: 378 STSAWIRQ-----VGALTPGHVRGILDRQLLVSLGISPNSCKAPSIVPVLWLPPXFSWVK 432
Query: 215 INTDGAARGHPGFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKW 36
+NTDG A+G+PG A G + RDS + + LG T+ AE A +LA + A R W
Sbjct: 433 VNTDGLAKGNPGPAACGGVFRDSAGYFLGGFSLSLGHRTSFYAELHAVILAVELAHARGW 492
Query: 35 PRILFETDSEN 3
+ E+DS +
Sbjct: 493 XNLWLESDSSS 503
>ref|XP_013594814.1| PREDICTED: uncharacterized protein LOC106302971 [Brassica oleracea
var. oleracea]
Length = 403
Score = 76.3 bits (186), Expect = 2e-11
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 9/242 (3%)
Frame = -3
Query: 707 PTFSLLHRI--HLTNSDICPRCNTDTELANHLLIHCPTTTTS*NIL------FNQLSNTP 552
P+ L+++ H+ C RC E NH+L P + + + N+
Sbjct: 87 PSLDSLYQLARHIARDGDCLRCGQVGETVNHVLFQRPFARLVWALSPIPAPPEDVMGNSL 146
Query: 551 NTNHTHAFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEILA 372
+N HA + ++ + +L W LW RN L++ K+ + IL
Sbjct: 147 YSNTDHALNIKKAYPRDEVKSEMVP--------WLLWRLWKCRNELLFNGKEYEAMSILR 198
Query: 371 WAQKLQQEYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAAR 192
A++ E W + + V H ++ T+ + W +P NW+K N+DGA
Sbjct: 199 KAREDADE--WERRKQVNLSVEGNKRVTHPIS----TSQAKPWKLPPTNWLKCNSDGAWH 252
Query: 191 GHPGFAGAGFICRDSDARTIIAMAQPL-GITTALTAETWAFLLASKTASERKWPRILFET 15
+G G++CRD + R + A A + G+ +++ E A A ++ + ++ +I+FE+
Sbjct: 253 KDRLNSGVGWLCRDGEGRLLCAGASVVTGLESSIRTEAEALQWADESMARFRYDKIIFES 312
Query: 14 DS 9
DS
Sbjct: 313 DS 314
>ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444619 [Malus domestica]
Length = 1183
Score = 76.3 bits (186), Expect = 2e-11
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 9/245 (3%)
Frame = -3
Query: 710 LPTFSLLHRIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNT-PNTNHTH 534
LPT L R + + IC C+ ++E +HL C + L Q P T
Sbjct: 927 LPTXDQLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQFGTXIPPTGSJS 986
Query: 533 AFTLTPQTTISQILQQPTSTSTISSFCFLFWTLWLSRNNLIYQQKQTTSEEIL----AWA 366
L +S+ ++S FL +W RN + ++ K + + AW
Sbjct: 987 DLWLX---FLSKXFSPHLXNVWJASGFFLLMAIWKMRNKVKFEGKPPSXSRLCRSTSAWI 1043
Query: 365 QKLQQ----EYSWAQHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGA 198
+++ + G +P + K + + V W P +W+K+NTDG
Sbjct: 1044 RQVGXLXPGHVRGILDRQLLVSLGISPN-----SXKAPSIVPVLWLPPXFSWVKVNTDGL 1098
Query: 197 ARGHPGFAGAGFICRDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKWPRILFE 18
A+G+PG A G + RDS + + LG T+ AE A +LA + A R W + E
Sbjct: 1099 AKGNPGPAACGGVFRDSXGYFLGGFSLSLGHRTSFYAELHAVILAIELAHARGWQNLWLE 1158
Query: 17 TDSEN 3
+DS +
Sbjct: 1159 SDSSS 1163
>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 76.3 bits (186), Expect = 2e-11
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 3/230 (1%)
Frame = -3
Query: 686 RIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTT 507
R HL++SDIC C + H+L CP + P FT +
Sbjct: 13 RRHLSDSDICQICKGAEKTIIHILRDCPAMEGI------WIRLVPAGKRREFFTQSLLEW 66
Query: 506 ISQIL--QQPTSTSTISS-FCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWA 336
+ L ++ T ST S+ F W W R I+ + + + + + L +E S A
Sbjct: 67 LFANLGDRRKTCESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRV-RFLKDLARETSMA 125
Query: 335 QHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFIC 156
H +SG H +R+ + WS P W K+NTDGA+RG+PG A AG +
Sbjct: 126 -HVIVRTLSGG-----HGERVERL----IAWSKPEEGWWKLNTDGASRGNPGLASAGGVL 175
Query: 155 RDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKWPRILFETDSE 6
RD + A +G+ +A AE W A ER+ R+ E DSE
Sbjct: 176 RDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSE 225
>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 314
Score = 76.3 bits (186), Expect = 2e-11
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 3/230 (1%)
Frame = -3
Query: 686 RIHLTNSDICPRCNTDTELANHLLIHCPTTTTS*NILFNQLSNTPNTNHTHAFTLTPQTT 507
R HL++SDIC C + H+L CP + P FT +
Sbjct: 13 RRHLSDSDICQICKGAEKTIIHILRDCPAMEGI------WIRLVPAGKRREFFTQSLLEW 66
Query: 506 ISQIL--QQPTSTSTISS-FCFLFWTLWLSRNNLIYQQKQTTSEEILAWAQKLQQEYSWA 336
+ L ++ T ST S+ F W W R I+ + + + + + L +E S A
Sbjct: 67 LFANLGDRRKTCESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRV-RFLKDLARETSMA 125
Query: 335 QHASPPIISGATPTVNHTLTDKRITTISVGWSVPNINWIKINTDGAARGHPGFAGAGFIC 156
H +SG H +R+ + WS P W K+NTDGA+RG+PG A AG +
Sbjct: 126 -HVIVRTLSGG-----HGERVERL----IAWSKPEEGWWKLNTDGASRGNPGLASAGGVL 175
Query: 155 RDSDARTIIAMAQPLGITTALTAETWAFLLASKTASERKWPRILFETDSE 6
RD + A +G+ +A AE W A ER+ R+ E DSE
Sbjct: 176 RDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSE 225