BLASTX nr result

ID: Papaver31_contig00048193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00048193
         (1057 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010925611.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-07
ref|XP_008791065.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-06

>ref|XP_010925611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Elaeis guineensis]
          Length = 750

 Score = 62.8 bits (151), Expect = 5e-07
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
 Frame = -2

Query: 243 GSKYCSQLLEVCAHKKNLVFGKLI--KLVINGLEEDSFFATELICIWICVRDKS----VF 82
           GS  C  LLE C   KNL+ G  +  ++VI GL  DS FAT+LI ++    D S    +F
Sbjct: 36  GSASCFHLLESCILDKNLLLGSQLHSRIVIAGLVNDSLFATKLITLYSLCGDLSSAEAIF 95

Query: 81  NLVPFDSVYTLNAMIRAYYTNGLYQQA 1
              P  +V+ LNAMIR Y +NGL Q+A
Sbjct: 96  ARFPGCNVFLLNAMIRGYSSNGLNQEA 122


>ref|XP_008791065.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Phoenix dactylifera]
          Length = 752

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
 Frame = -2

Query: 243 GSKYCSQLLEVCAHKKNLVFGKLI--KLVINGLEEDSFFATELICIW-ICVRDKS---VF 82
           GS    QLLE C    NL+ G  I  ++VI GLE DSFFA++L+ ++ +C    S   +F
Sbjct: 36  GSASYLQLLESCILDGNLLLGSQIHSRIVIAGLESDSFFASKLVALYSLCGYLSSAVAIF 95

Query: 81  NLVPFDSVYTLNAMIRAYYTNGLYQQA 1
              P  +V+ LNAMIR Y +NGL Q+A
Sbjct: 96  GRFPSCNVFLLNAMIRGYSSNGLNQEA 122


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