BLASTX nr result
ID: Papaver31_contig00045826
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00045826
(491 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 138 8e-35
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 97 8e-21
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 84 5e-18
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s... 77 2e-15
emb|CDP20047.1| unnamed protein product [Coffea canephora] 70 2e-15
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 74 6e-15
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 74 6e-15
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s... 76 8e-15
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata] 74 8e-15
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 73 2e-14
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s... 72 4e-14
ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III s... 72 7e-14
ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III s... 72 7e-14
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s... 69 9e-14
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s... 69 9e-14
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic... 73 1e-13
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 70 2e-13
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri] 67 2e-13
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s... 67 3e-13
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba] 68 6e-13
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 138 bits (347), Expect(2) = 8e-35
Identities = 75/119 (63%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G+PLN DRLY+K KA SLSP EI KL AR HDMTPEG CS+AFKK
Sbjct: 403 MEGKDGTPLNLDRLYMKVKATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKK 462
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLGKFSANVAGITLQQLQ 435
SLLD+E F + KEGGFL KC TSL NTR+ L LD K S+SL K SAN+AGITLQQLQ
Sbjct: 463 SLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGVKKGSESLEKVSANIAGITLQQLQ 521
Score = 35.8 bits (81), Expect(2) = 8e-35
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRLIKA EDLSI YD+TV AS
Sbjct: 363 SRRLIKALEDLSIHYDSTVRSAS 385
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 97.4 bits (241), Expect(2) = 8e-21
Identities = 58/120 (48%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL-------SLSPKEIKKLADARF*AHDMTPEGDCSEAFK 255
++ K G PLN DRL++K KA SLSP EI K AD R HDMTPEG CS AFK
Sbjct: 405 MEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFK 464
Query: 256 KSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLGKFSANVAGITLQQLQ 435
+SL D FL KC +L TR+ L LDE+K+ L +AN++GIT QQLQ
Sbjct: 465 ESLSD-----------FLKKCVVALRKTRRELGLDEDKVREHVLENVAANISGITSQQLQ 513
Score = 29.6 bits (65), Expect(2) = 8e-21
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+K+ EDLS YD TV +S
Sbjct: 365 SRRLMKSLEDLSTYYDETVRNSS 387
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 83.6 bits (205), Expect(2) = 5e-18
Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN +R+YLK KA SL P EI K+ D R +DMTP+G CS AFKK
Sbjct: 916 MEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRISRYDMTPDGGCSSAFKK 975
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEE---KMDSQSLGKFSANVAGITLQQ 429
L+D F+ + L NTRK L LDEE K +S L +AN++GIT QQ
Sbjct: 976 LLVD-----------FIQNRISILRNTRKALGLDEEYAKKDNSDILEHIAANISGITTQQ 1024
Query: 430 LQ 435
L+
Sbjct: 1025 LK 1026
Score = 33.9 bits (76), Expect(2) = 5e-18
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRLIKA EDL++ YD+TV AS
Sbjct: 876 SRRLIKALEDLAVYYDDTVRNAS 898
>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
guineensis]
Length = 1369
Score = 76.6 bits (187), Expect(2) = 2e-15
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN D+L++K A +LSP EI + D R +DMTPEG CS +FKK
Sbjct: 893 MEGKDGIPLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYDMTPEGGCSASFKK 952
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDE---EKMDSQSLGKFSANVAGITLQQ 429
L D FL+K +L N R+ L LDE +K D L +AN++GI+ +Q
Sbjct: 953 MLSD-----------FLHKRVAALCNIRRALQLDENHLQKQDYSVLESVAANISGISAKQ 1001
Query: 430 LQ 435
LQ
Sbjct: 1002 LQ 1003
Score = 32.0 bits (71), Expect(2) = 2e-15
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+K EDLSI YD TV AS
Sbjct: 853 SRRLMKGLEDLSIYYDQTVRTAS 875
>emb|CDP20047.1| unnamed protein product [Coffea canephora]
Length = 611
Score = 70.1 bits (170), Expect(2) = 2e-15
Identities = 49/117 (41%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNFDRL +K KA SLSP +I K D R D TPEG CSEAF+ SL
Sbjct: 403 KSGHPLNFDRLLMKVKATCPAGDQKSLSPSDICKKTDERLSERDTTPEGGCSEAFRDSL- 461
Query: 268 DDEAFKEGKEGGFL-YKCTTSLTNTRKGLPLDEEKMDSQSLGKFSANVAGITLQQLQ 435
FL KC +L T + L EE +S S S+N++G T +QL+
Sbjct: 462 ----------SKFLKVKCVQNLEKTIESLKAQEEDHNS-SFENISSNISGFTSRQLE 507
Score = 38.5 bits (88), Expect(2) = 2e-15
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDLSIQYDNTV AS
Sbjct: 360 SRRLMKALEDLSIQYDNTVRNAS 382
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 74.3 bits (181), Expect(2) = 6e-15
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLS 966
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 435
D FL K +L N R+ L L EE+ + G K + N++GIT +QLQ
Sbjct: 967 D-----------FLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Score = 32.7 bits (73), Expect(2) = 6e-15
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YD+TV AS
Sbjct: 864 SRRLMKALEDLAVYYDSTVRNAS 886
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 74.3 bits (181), Expect(2) = 6e-15
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLS 966
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 435
D FL K +L N R+ L L EE+ + G K + N++GIT +QLQ
Sbjct: 967 D-----------FLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Score = 32.7 bits (73), Expect(2) = 6e-15
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YD+TV AS
Sbjct: 864 SRRLMKALEDLAVYYDSTVRNAS 886
>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
dactylifera]
Length = 1018
Score = 75.9 bits (185), Expect(2) = 8e-15
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN D+L++K A +LSP EI D R +D TPEG CS AFKK
Sbjct: 542 MEGKDGIPLNLDQLFMKVMATCPLREQDTLSPAEILHTLDDRLSKYDTTPEGGCSAAFKK 601
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDE---EKMDSQSLGKFSANVAGITLQQ 429
L D FL+K + +N R+ L LDE +K DS L +AN++GI+ +Q
Sbjct: 602 MLSD-----------FLHKHAAAFSNIRRALQLDENHVQKKDSSVLESVAANISGISAKQ 650
Query: 430 LQ 435
LQ
Sbjct: 651 LQ 652
Score = 30.8 bits (68), Expect(2) = 8e-15
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+K EDLSI YD TV A+
Sbjct: 502 SRRLMKGLEDLSIYYDQTVRTAN 524
>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
Length = 548
Score = 74.3 bits (181), Expect(2) = 8e-15
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Frame = +1
Query: 91 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 252
+ ++ K G+PLN DR+ +KAKA SLSP EI K + R HDMTPEG CS AF
Sbjct: 403 VNMEGKNGTPLNLDRILMKAKATCPANGAFSLSPSEISKRVEDRLSKHDMTPEGGCSAAF 462
Query: 253 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTR--KGLPLDEE-KMDSQSLGKFSANVAGITL 423
K SL FL K + + NTR GLP+D + +L + +++++G+T
Sbjct: 463 KNSLAQ-----------FLEKQISLIQNTRCVLGLPMDANGDPNLSTLERIASDISGLTA 511
Query: 424 QQLQT-MSTWGR*YRV 468
QQ + M T R Y +
Sbjct: 512 QQFEVFMETCIRRYHL 527
Score = 32.3 bits (72), Expect(2) = 8e-15
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDLS YD TV AS
Sbjct: 365 SRRLMKALEDLSTHYDGTVRNAS 387
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
lycopersicum]
Length = 1390
Score = 72.8 bits (177), Expect(2) = 2e-14
Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRASLS 966
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 435
D FL K +L N R+ L L EE+ + G K N++GIT +QLQ
Sbjct: 967 D-----------FLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQ 1015
Score = 32.7 bits (73), Expect(2) = 2e-14
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YD+TV AS
Sbjct: 864 SRRLMKALEDLAVYYDSTVRNAS 886
>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
acuminata subsp. malaccensis]
Length = 1372
Score = 72.0 bits (175), Expect(2) = 4e-14
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAILS------LSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN D+L++K A LSP E ++ D R +DM+PEG CS AFKK
Sbjct: 896 MEGKDGIPLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFKK 955
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKM---DSQSLGKFSANVAGITLQQ 429
L D F++K ++L N RK L LDE M DS L +A ++GI+ +Q
Sbjct: 956 LLSD-----------FVHKRVSALANMRKSLKLDETDMGRKDSTVLENVAAKISGISSKQ 1004
Query: 430 LQ 435
L+
Sbjct: 1005 LE 1006
Score = 32.3 bits (72), Expect(2) = 4e-14
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+K EDLSI YD TV AS
Sbjct: 856 SRRLMKGLEDLSIYYDETVRNAS 878
>ref|XP_006828249.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Amborella trichopoda] gi|548832896|gb|ERM95665.1|
hypothetical protein AMTR_s00023p00196820 [Amborella
trichopoda]
Length = 1383
Score = 72.0 bits (175), Expect(2) = 7e-14
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN DRL++K KA SLSP EI + + R HDMTPE CS AFK+
Sbjct: 903 MEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKE 962
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQ---SLGKFSANVAGITLQQ 429
L F+ K ++ TR L LDE+ +D + L +AN++GI+ QQ
Sbjct: 963 EL-----------SNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQ 1011
Query: 430 LQ 435
L+
Sbjct: 1012 LR 1013
Score = 31.6 bits (70), Expect(2) = 7e-14
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRLIK+ EDLS YD+TV +S
Sbjct: 863 SRRLIKSLEDLSTHYDDTVRNSS 885
>ref|XP_011627269.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Amborella trichopoda]
Length = 1367
Score = 72.0 bits (175), Expect(2) = 7e-14
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 258
++ K G PLN DRL++K KA SLSP EI + + R HDMTPE CS AFK+
Sbjct: 903 MEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKE 962
Query: 259 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQ---SLGKFSANVAGITLQQ 429
L F+ K ++ TR L LDE+ +D + L +AN++GI+ QQ
Sbjct: 963 EL-----------SNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQ 1011
Query: 430 LQ 435
L+
Sbjct: 1012 LR 1013
Score = 31.6 bits (70), Expect(2) = 7e-14
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRLIK+ EDLS YD+TV +S
Sbjct: 863 SRRLIKSLEDLSTHYDDTVRNSS 885
>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Nicotiana tomentosiformis]
gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
tomentosiformis]
Length = 1390
Score = 68.6 bits (166), Expect(2) = 9e-14
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA SLS EI ++ + R HDM+PEG CSEAF+ SL
Sbjct: 908 KKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLS 967
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKM---DSQSLGKFSANVAGITLQQLQ 435
D FL K +L R+ L LD E+ D + L + N++GIT +QLQ
Sbjct: 968 D-----------FLIKHLAETLKRLREALLLDGEQYAGGDREYLENIALNISGITKKQLQ 1016
Score = 34.7 bits (78), Expect(2) = 9e-14
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YDNTV AS
Sbjct: 865 SRRLMKALEDLAVYYDNTVRNAS 887
>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Nicotiana tomentosiformis]
gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
tomentosiformis]
Length = 1375
Score = 68.6 bits (166), Expect(2) = 9e-14
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA SLS EI ++ + R HDM+PEG CSEAF+ SL
Sbjct: 908 KKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLS 967
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKM---DSQSLGKFSANVAGITLQQLQ 435
D FL K +L R+ L LD E+ D + L + N++GIT +QLQ
Sbjct: 968 D-----------FLIKHLAETLKRLREALLLDGEQYAGGDREYLENIALNISGITKKQLQ 1016
Score = 34.7 bits (78), Expect(2) = 9e-14
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YDNTV AS
Sbjct: 865 SRRLMKALEDLAVYYDNTVRNAS 887
>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
Length = 544
Score = 72.8 bits (177), Expect(2) = 1e-13
Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Frame = +1
Query: 112 GSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLLDD 273
G+PLN D+LY K A SLSP EI L + R +DMTPEG CS AFK LLD
Sbjct: 408 GTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSSAFKNLLLD- 466
Query: 274 EAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQS-LGKFSANVAGITLQQLQ 435
FL+K L TR L L E+ ++ S L +AN++GI+ QQL+
Sbjct: 467 ----------FLHKHVAELRKTRIRLQLQEDHKETSSVLENVAANISGISAQQLK 511
Score = 29.6 bits (65), Expect(2) = 1e-13
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+K+ EDLS+ YD TV ++
Sbjct: 363 SRRLMKSLEDLSLYYDQTVRSSN 385
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 69.7 bits (169), Expect(2) = 2e-13
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 91 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 252
+ ++ K G+PLN DRL +K KAI +SLSP EI K + R HDMTPEG CS AF
Sbjct: 403 VNMEGKDGTPLNLDRLLMKTKAICPANGVISLSPAEISKRVEERLSKHDMTPEGGCSAAF 462
Query: 253 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQS---LGKFSANVAGITL 423
K SL F K + + TR L L + D + L + +++++G+T
Sbjct: 463 KNSL-----------AKFFEKHISVIRKTRCALGLPMDASDDSNFFILERIASDISGLTA 511
Query: 424 QQLQ 435
+Q +
Sbjct: 512 RQFE 515
Score = 32.3 bits (72), Expect(2) = 2e-13
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDLS YD TV AS
Sbjct: 365 SRRLMKALEDLSTHYDGTVRNAS 387
>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
Length = 547
Score = 67.4 bits (163), Expect(2) = 2e-13
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Frame = +1
Query: 97 LKWKCGSPLNFDRLYLKAKAI-------LSLSPKEIKKLADARF*AHDMTPEGDCSEAFK 255
++ K G+PLN DRL++K +A + LSP EI + A+ R HD TPEG CS AFK
Sbjct: 403 MEGKSGTPLNLDRLFMKIQATCPTTNASIPLSPSEISQYANDRLSKHDATPEGGCSSAFK 462
Query: 256 KSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEE---KMDSQSLGKFSANVAGITLQ 426
+ LLD F+++ +L N + L +D+ D L +A + I+ Q
Sbjct: 463 QMLLD-----------FIHEKIATLRNVSRILQIDDNYGGDSDGDMLQTIAAKIFSISSQ 511
Query: 427 QLQ 435
QL+
Sbjct: 512 QLK 514
Score = 34.7 bits (78), Expect(2) = 2e-13
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS--VVSSNHG 91
SRRL+KA EDLSI YD TV AS +V ++G
Sbjct: 363 SRRLMKALEDLSIHYDETVRNASGGIVQFHYG 394
>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
sylvestris]
Length = 1390
Score = 66.6 bits (161), Expect(2) = 3e-13
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Frame = +1
Query: 106 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 267
K G PLNF RL++K KA LS EI ++ + R HDM+PEG CSEAF+ SL
Sbjct: 908 KKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIVNERLSYHDMSPEGGCSEAFRASLS 967
Query: 268 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKM---DSQSLGKFSANVAGITLQQLQ 435
D FL K +L R+ L L EE+ D + L + N++GIT +QLQ
Sbjct: 968 D-----------FLIKNLAETLKRLREALLLGEEQYAGGDREYLENVALNISGITKKQLQ 1016
Score = 34.7 bits (78), Expect(2) = 3e-13
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDL++ YDNTV AS
Sbjct: 865 SRRLMKALEDLAVYYDNTVRNAS 887
>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
Length = 548
Score = 67.8 bits (164), Expect(2) = 6e-13
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 91 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 252
+ ++ K G PLN DRL +K KA ++LSP EI + + R HDMTPEG CS AF
Sbjct: 403 VNMEGKDGPPLNLDRLLMKTKATCPANGSVALSPSEIIRKVEERLLKHDMTPEGGCSAAF 462
Query: 253 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRK--GLPLDEE-KMDSQSLGKFSANVAGITL 423
K SL F K S+ +R GLP+D + D L + +A+++G+T
Sbjct: 463 KSSLTK-----------FFEKSIYSIRKSRSVLGLPMDPNGEQDLSILERTAADISGLTA 511
Query: 424 QQLQ 435
+Q +
Sbjct: 512 RQFE 515
Score = 32.7 bits (73), Expect(2) = 6e-13
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 2 SRRLIKA*EDLSIQYDNTVHKAS 70
SRRL+KA EDLS YD+TV AS
Sbjct: 365 SRRLMKALEDLSTHYDSTVRNAS 387