BLASTX nr result

ID: Papaver31_contig00042620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00042620
         (711 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010271709.1| PREDICTED: transcription initiation factor T...    58   7e-06
ref|XP_010271712.1| PREDICTED: transcription initiation factor T...    57   9e-06

>ref|XP_010271709.1| PREDICTED: transcription initiation factor TFIID subunit 12 isoform
           X1 [Nelumbo nucifera] gi|720050249|ref|XP_010271711.1|
           PREDICTED: transcription initiation factor TFIID subunit
           12 isoform X1 [Nelumbo nucifera]
          Length = 558

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 48/125 (38%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
 Frame = -3

Query: 346 LQRGGVAISVPAHHHSRPPTPSTVQPSHFSSFGPSSYTTQF---SRNPVNVPETLDPNQ- 179
           +QRGG+AI VPA HH+RPP     QP+ +SSFG SS+  QF   SRN VNVP   DPN  
Sbjct: 144 MQRGGLAIGVPA-HHARPPQ----QPTSYSSFGTSSFNQQFGGLSRNSVNVP---DPNNS 195

Query: 178 ----------------MILIWHPADQNXXXXXXXXXXXGVVSSSMRPPAPASNQSQSAFQ 47
                           MI       Q              V   ++   P+S+QS  A Q
Sbjct: 196 SSTQVRQPIQGIQSIGMIGSHGSGSQLRPGGVSANPQPRPVQPPLKSQPPSSSQS-LASQ 254

Query: 46  KYQSH 32
           K+QSH
Sbjct: 255 KFQSH 259


>ref|XP_010271712.1| PREDICTED: transcription initiation factor TFIID subunit 12 isoform
           X2 [Nelumbo nucifera]
          Length = 382

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
 Frame = -3

Query: 346 LQRGGVAISVPAHHHSRPPTPSTVQPSHFSSFGPSSYTTQF---SRNPVNVPETLDPN 182
           +QRGG+AI VPA HH+RPP     QP+ +SSFG SS+  QF   SRN VNVP   DPN
Sbjct: 144 MQRGGLAIGVPA-HHARPPQ----QPTSYSSFGTSSFNQQFGGLSRNSVNVP---DPN 193


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