BLASTX nr result

ID: Papaver31_contig00042532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00042532
         (617 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013457916.1| F-box protein interaction domain protein [Me...    50   5e-06

>ref|XP_013457916.1| F-box protein interaction domain protein [Medicago truncatula]
           gi|657390426|gb|KEH31947.1| F-box protein interaction
           domain protein [Medicago truncatula]
          Length = 316

 Score = 50.1 bits (118), Expect(2) = 5e-06
 Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
 Frame = -3

Query: 378 RMLRQKEK----LKSAKEMNIDDAVP-YLPEELVIENILTRLPFRTLAQYSCISKLWCNS 214
           R+LR  +     ++SA E  ++  +P +LPEEL++E IL RL  ++L QY C+ K W  +
Sbjct: 14  RLLRYHQNGTVSIQSASETTVNKPLPPFLPEELIVE-ILLRLSVKSLLQYKCVCKTW-KT 71

Query: 213 ISKDARFAKAH 181
           +  D +FAK+H
Sbjct: 72  LLSDPQFAKSH 82



 Score = 27.3 bits (59), Expect(2) = 5e-06
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 70  LLMDVASPHTTELVGYCNGLACV 2
           + M   + H+T ++G CNGL C+
Sbjct: 95  VFMGFETRHSTSIIGSCNGLLCL 117


Top