BLASTX nr result
ID: Papaver31_contig00039264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00039264
(557 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001944766.2| PREDICTED: DNA-directed RNA polymerase II su... 62 2e-07
ref|XP_014356182.1| PREDICTED: DNA-directed RNA polymerase II su... 60 9e-07
gb|KOB77756.1| DNA-directed RNA polymerase [Operophtera brumata] 60 9e-07
ref|XP_013176451.1| PREDICTED: DNA-directed RNA polymerase II su... 59 1e-06
gb|AAC62246.1| DNA-dependent RNA polymerase II largest subunit, ... 59 2e-06
ref|XP_009034936.1| hypothetical protein AURANDRAFT_36761 [Aureo... 59 2e-06
ref|XP_013134885.1| PREDICTED: DNA-directed RNA polymerase II su... 59 2e-06
ref|XP_013134884.1| PREDICTED: DNA-directed RNA polymerase II su... 59 2e-06
ref|XP_013134883.1| PREDICTED: DNA-directed RNA polymerase II su... 59 2e-06
ref|XP_002895253.1| DNA-directed RNA polymerase II largest subun... 58 3e-06
gb|ETP52302.1| DNA-directed RNA polymerase II subunit RPB1 [Phyt... 58 3e-06
ref|XP_008916007.1| DNA-directed RNA polymerase II subunit RPB1 ... 58 3e-06
gb|KPM04983.1| hypothetical protein QR98_0034410 [Sarcoptes scab... 58 3e-06
gb|EMT23377.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi... 57 4e-06
ref|XP_009525799.1| RNA polymerase II large subunit [Phytophthor... 57 4e-06
gb|AAK00310.1|AF315820_1 DNA-dependent RNA polymerase II largest... 57 6e-06
ref|XP_011197310.1| PREDICTED: skin secretory protein xP2-like [... 57 8e-06
gb|KQC45091.1| RPS15p component of the small (40S) ribosomal sub... 56 1e-05
>ref|XP_001944766.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Acyrthosiphon pisum]
Length = 741
Score = 61.6 bits (148), Expect = 2e-07
Identities = 51/157 (32%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Frame = -2
Query: 439 YDASSH-ALPPTYHTSDTLVYDASAHAVPPLHQTHPPLSYDTSSQAFVTAAP-----HNV 278
Y +SS+ A P Y + + A++ P + P D Q +VT AP +
Sbjct: 462 YSSSSYKAAKPEYSAP---AHKSIAYSTPSSYVAVAPPKCDEHEQEYVTKAPSYDSKQSY 518
Query: 277 APSYAATPVSYDQSSQV--SVPEA-----SGFGPAYWAAVAHESSNQVYDAS----SQAY 131
AP+ A +P +Y S Q S P A + +GPA + A S Y AS S +Y
Sbjct: 519 APAPAYSPAAYTSSKQSYSSAPIAVYSPVASYGPAPEYSAAPSYSAPSYSASQSYQSASY 578
Query: 130 VPAVPHSIAPCYAPPPAVSYDPSSQVYVPEASALGPA 20
A P +P YAP PA +Y P++Q Y P A + PA
Sbjct: 579 SAAAPSYPSPSYAPAPAPAYAPAAQSYAPAAPSYAPA 615
>ref|XP_014356182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Papilio
machaon] gi|930676620|gb|KPJ16760.1| DNA-directed RNA
polymerase II subunit RPB1 [Papilio machaon]
Length = 1904
Score = 59.7 bits (143), Expect = 9e-07
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
H++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1615 HYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1674
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S P + G+ P+ + ++ ++ VY +S +Y P+
Sbjct: 1675 TSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPGYSPS---SPSYSPTSPVYSPTSPSYSPS 1731
Query: 121 VPHSIAPCYA-PPPAVSYDPSSQVYVPEASALGPA 20
P+ C A P + SY P+S Y+P + P+
Sbjct: 1732 SPNYTPTCPAYSPSSPSYSPTSPAYLPSSPKYSPS 1766
>gb|KOB77756.1| DNA-directed RNA polymerase [Operophtera brumata]
Length = 1874
Score = 59.7 bits (143), Expect = 9e-07
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
+++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1583 NYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1642
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S V P + G+ P + ++ ++ VY +S +Y P+
Sbjct: 1643 TSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPGYSPT---SPSYSPTSPVYSPASPSYSPS 1699
Query: 121 VPH--SIAPCYAPPPAVSYDPSSQVYVPEASALGPA 20
P+ +P Y+P SY P+S Y P + + P+
Sbjct: 1700 SPNYTPASPNYSPASPSSYSPTSPAYSPTSPSYSPS 1735
>ref|XP_013176451.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb1 [Papilio
xuthus]
Length = 1904
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
H++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1615 HYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1674
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S P + G+ P+ + ++ ++ VY +S +Y P+
Sbjct: 1675 TSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPGYSPS---SPSYSPTSPVYSPTSPSYSPS 1731
Query: 121 VPHSIAPCYA-PPPAVSYDPSSQVYVPEASALGPA 20
P+ C A P + SY P+S Y+P + P+
Sbjct: 1732 SPNYTPNCPAYSPSSPSYSPTSPAYLPSSPKYSPS 1766
>gb|AAC62246.1| DNA-dependent RNA polymerase II largest subunit, partial [Breviata
anathema]
Length = 1690
Score = 58.9 bits (141), Expect = 2e-06
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Frame = -2
Query: 475 YMTVHHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQ 308
Y+ V +P Y +S A P ++ + Y ++ A P + P S Y +S
Sbjct: 1494 YIPVPGSPAAAGYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1553
Query: 307 AFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQA 134
A+ A+P +P+Y+ +Y +S P + + PA + A+ ++ Y +S A
Sbjct: 1554 AYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA---SPAYSPASPAYSPASPA 1610
Query: 133 YVPAVP--HSIAPCYAP------PPAVSYDPSSQVYVPEASALGPA 20
Y PA P +P Y+P P + +Y P+S Y P + A GPA
Sbjct: 1611 YSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPA 1656
>ref|XP_009034936.1| hypothetical protein AURANDRAFT_36761 [Aureococcus anophagefferens]
gi|323454233|gb|EGB10103.1| hypothetical protein
AURANDRAFT_36761 [Aureococcus anophagefferens]
Length = 1738
Score = 58.9 bits (141), Expect = 2e-06
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Frame = -2
Query: 484 VSPYMTVHHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDT 317
VSP ++ + P + Y +S A PT ++ + Y ++ A P + P S Y
Sbjct: 1498 VSPVLSPAYAPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1557
Query: 316 SSQAFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDAS 143
+S A+ +P +P+Y+ T +Y +S P + + P + A+ ++ Y +
Sbjct: 1558 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT---SPAYSPTSPAYSPT 1614
Query: 142 SQAYVPAVP--HSIAPCYAP------PPAVSYDPSSQVYVPEASALGP 23
S AY P P +P Y+P P + +Y PSS Y P + A P
Sbjct: 1615 SPAYSPTSPAYSPTSPAYSPTSPAYSPSSPAYSPSSPAYSPGSPAYSP 1662
>ref|XP_013134885.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb1-like isoform
X3 [Papilio polytes]
Length = 1862
Score = 58.5 bits (140), Expect = 2e-06
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
H++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1573 HYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1632
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S P + G+ P+ + ++ ++ VY +S +Y P+
Sbjct: 1633 TSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPGYSPS---SPSYSPTSPVYSPTSPSYSPS 1689
Query: 121 VPHSIAPCYA-PPPAVSYDPSSQVYVPEASALGPA 20
P+ C A P + SY P+S Y P + P+
Sbjct: 1690 SPNYTPTCPAYSPSSPSYSPTSPAYSPSSPKYSPS 1724
>ref|XP_013134884.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb1-like isoform
X2 [Papilio polytes]
Length = 1904
Score = 58.5 bits (140), Expect = 2e-06
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
H++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1615 HYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1674
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S P + G+ P+ + ++ ++ VY +S +Y P+
Sbjct: 1675 TSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPGYSPS---SPSYSPTSPVYSPTSPSYSPS 1731
Query: 121 VPHSIAPCYA-PPPAVSYDPSSQVYVPEASALGPA 20
P+ C A P + SY P+S Y P + P+
Sbjct: 1732 SPNYTPTCPAYSPSSPSYSPTSPAYSPSSPKYSPS 1766
>ref|XP_013134883.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb1-like isoform
X1 [Papilio polytes]
Length = 1904
Score = 58.5 bits (140), Expect = 2e-06
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVT 296
H++P + +Y +S + PT ++ + Y ++ + P ++ P S Y +S ++
Sbjct: 1615 HYSPTSPIYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1674
Query: 295 AAPHN--VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPA 122
+P +PSY+ T SY +S P + G+ P+ + ++ ++ VY +S +Y P+
Sbjct: 1675 TSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPGYSPS---SPSYSPTSPVYSPTSPSYSPS 1731
Query: 121 VPHSIAPCYA-PPPAVSYDPSSQVYVPEASALGPA 20
P+ C A P + SY P+S Y P + P+
Sbjct: 1732 SPNYTPTCPAYSPSSPSYSPTSPAYSPSSPKYSPS 1766
>ref|XP_002895253.1| DNA-directed RNA polymerase II largest subunit [Phytophthora
infestans T30-4] gi|262101000|gb|EEY59052.1| DNA-directed
RNA polymerase II largest subunit [Phytophthora infestans
T30-4]
Length = 1858
Score = 58.2 bits (139), Expect = 3e-06
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = -2
Query: 505 LPETQHCVSPYMTVHHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPP 332
L T SP M+ ++P + Y +S A PT ++ + Y ++ A P + P
Sbjct: 1603 LNPTSPAYSP-MSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1661
Query: 331 LS--YDTSSQAFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESS 164
S Y +S A+ +P +P+Y+ T +Y +S P + + P + A+ +
Sbjct: 1662 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT---SPAYSPT 1718
Query: 163 NQVYDASSQAYVPAVP--HSIAPCYAPPPAVSYDPSSQVYVPEASALGPAY 17
+ Y +S AY P P +P Y+P + +Y P+S Y P S PAY
Sbjct: 1719 SPAYSPTSPAYSPTSPAYSPTSPAYSPT-SPAYSPTSPAYTPAYSPTSPAY 1768
>gb|ETP52302.1| DNA-directed RNA polymerase II subunit RPB1 [Phytophthora parasitica
P10297]
Length = 1859
Score = 58.2 bits (139), Expect = 3e-06
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = -2
Query: 505 LPETQHCVSPYMTVHHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPP 332
L T SP M+ ++P + Y +S A PT ++ + Y ++ A P + P
Sbjct: 1603 LNPTSPAYSP-MSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1661
Query: 331 LS--YDTSSQAFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESS 164
S Y +S A+ +P +P+Y+ T +Y +S P + + P + A+ +
Sbjct: 1662 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT---SPAYSPT 1718
Query: 163 NQVYDASSQAYVPAVP--HSIAPCYAPPPAVSYDPSSQVYVPEASALGPAY 17
+ Y +S AY P P +P Y+P + +Y P+S Y P S PAY
Sbjct: 1719 SPAYSPTSPAYSPTSPAYSPTSPAYSPT-SPAYSPTSPAYTPAYSPTSPAY 1768
Score = 57.0 bits (136), Expect = 6e-06
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Frame = -2
Query: 460 HTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTA 293
++P + Y +S A PT ++ + Y ++ A P + P S Y +S A+
Sbjct: 1666 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1725
Query: 292 AP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYW-AAVAHESSNQVYDASSQAYVPA 122
+P +P+Y+ T +Y +S P + + PAY + A+ ++ Y +S AY P
Sbjct: 1726 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYTPAYSPTSPAYSPTSPAYSPTSPAYSPT 1785
Query: 121 VP--HSIAPCYAP------PPAVSYDPSSQVYVPEASALGPA 20
P +P Y+P P + +Y P+S Y P + + PA
Sbjct: 1786 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPA 1827
>ref|XP_008916007.1| DNA-directed RNA polymerase II subunit RPB1 [Phytophthora parasitica
INRA-310] gi|566031579|gb|ETI54490.1| DNA-directed RNA
polymerase II subunit RPB1 [Phytophthora parasitica
P1569] gi|567969264|gb|ETK94360.1| DNA-directed RNA
polymerase II subunit RPB1 [Phytophthora parasitica]
gi|567997657|gb|ETL47736.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica]
gi|568026877|gb|ETM00848.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica]
gi|568057360|gb|ETM54030.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica]
gi|568083699|gb|ETM98661.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica INRA-310]
gi|570335293|gb|ETO83241.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica P1976]
gi|570959337|gb|ETP24316.1| DNA-directed RNA polymerase
II subunit RPB1 [Phytophthora parasitica CJ01A1]
Length = 1859
Score = 58.2 bits (139), Expect = 3e-06
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Frame = -2
Query: 505 LPETQHCVSPYMTVHHTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPP 332
L T SP M+ ++P + Y +S A PT ++ + Y ++ A P + P
Sbjct: 1603 LNPTSPAYSP-MSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1661
Query: 331 LS--YDTSSQAFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESS 164
S Y +S A+ +P +P+Y+ T +Y +S P + + P + A+ +
Sbjct: 1662 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT---SPAYSPT 1718
Query: 163 NQVYDASSQAYVPAVP--HSIAPCYAPPPAVSYDPSSQVYVPEASALGPAY 17
+ Y +S AY P P +P Y+P + +Y P+S Y P S PAY
Sbjct: 1719 SPAYSPTSPAYSPTSPAYSPTSPAYSPT-SPAYSPTSPAYTPAYSPTSPAY 1768
Score = 57.0 bits (136), Expect = 6e-06
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Frame = -2
Query: 460 HTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTA 293
++P + Y +S A PT ++ + Y ++ A P + P S Y +S A+
Sbjct: 1666 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1725
Query: 292 AP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYW-AAVAHESSNQVYDASSQAYVPA 122
+P +P+Y+ T +Y +S P + + PAY + A+ ++ Y +S AY P
Sbjct: 1726 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYTPAYSPTSPAYSPTSPAYSPTSPAYSPT 1785
Query: 121 VP--HSIAPCYAP------PPAVSYDPSSQVYVPEASALGPA 20
P +P Y+P P + +Y P+S Y P + + PA
Sbjct: 1786 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPA 1827
>gb|KPM04983.1| hypothetical protein QR98_0034410 [Sarcoptes scabiei]
Length = 409
Score = 57.8 bits (138), Expect = 3e-06
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Frame = -2
Query: 463 HHTPHTLVYDASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTAA 290
+++P + Y SS P Y S T Y ++ + P ++ P S Y +S ++ +
Sbjct: 122 NYSPSSPNYSPSS----PNYSPSST-GYSPASPSYSPTSPSYSPTSPNYSPTSPSYSPTS 176
Query: 289 PHN---VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPAV 119
P N +PSY+AT SY SS P + G+ P + + S+ Y SS Y P+
Sbjct: 177 PSNYSPTSPSYSATSPSYSPSSPGYSPSSPGYSPT---SPGYSPSSPGYSPSSPGYSPS- 232
Query: 118 PHSIAPCYAPPPAVSYDPSSQVYVPEASALGPAYWA 11
+P Y+P + Y PSS Y P + P+Y A
Sbjct: 233 ----SPSYSPS-SPGYSPSSPSYSPSSPGYSPSYSA 263
>gb|EMT23377.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
Length = 1847
Score = 57.4 bits (137), Expect = 4e-06
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Frame = -2
Query: 469 TVHHTPHTLVYDASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLSYDTSSQAFVTAA 290
++ ++P + Y +SHA PT + Y ++HA P ++ P S S +F T+
Sbjct: 1627 SLEYSPTSPSYSPTSHAYSPTSPS-----YSPTSHAYSPTSPSYSPTSPVYSPASFSTSP 1681
Query: 289 PHN-VAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPAVPH 113
+N +PSY+ T SY +S P + + P + + ++ Y +S +Y P P
Sbjct: 1682 YYNPTSPSYSPTSHSYSPTSPRYSPASPSYSPT---SPNYSPTSPAYSPTSPSYSPTSPS 1738
Query: 112 --SIAPCYAPP-----PAVSYDPSSQVYVPEASALGPAY 17
+P Y+P P+ +Y PSS + + S L P Y
Sbjct: 1739 YSPTSPSYSPTSPSYSPSRAYSPSSPMMMSPYSQLPPNY 1777
>ref|XP_009525799.1| RNA polymerase II large subunit [Phytophthora sojae]
gi|348676924|gb|EGZ16741.1| RNA polymerase II large
subunit [Phytophthora sojae]
Length = 1852
Score = 57.4 bits (137), Expect = 4e-06
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Frame = -2
Query: 505 LPETQHCVSPYMTVHHTPHTLVYDASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLS 326
L T SP M+ ++P + Y +S A PT + Y ++ A P + P S
Sbjct: 1603 LNPTSPAYSP-MSPAYSPTSPAYSPTSPAYSPT-----SPAYSPTSPAYSPTSPAYSPTS 1656
Query: 325 --YDTSSQAFVTAAP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQ 158
Y +S A+ +P +P+Y+ T +Y +S P + + P + A+ ++
Sbjct: 1657 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT---SPAYSPTSP 1713
Query: 157 VYDASSQAYVPAVP--HSIAPCYAPPPAVSYDPSSQVYVPEASALGPAY 17
Y +S AY P P +P Y+P + +Y P+S Y P S PAY
Sbjct: 1714 AYSPTSPAYSPTSPAYSPTSPAYSPT-SPAYSPTSPAYTPAYSPTSPAY 1761
Score = 57.0 bits (136), Expect = 6e-06
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Frame = -2
Query: 460 HTPHTLVYDASSHALPPTY--HTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTA 293
++P + Y +S A PT ++ + Y ++ A P + P S Y +S A+
Sbjct: 1659 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1718
Query: 292 AP--HNVAPSYAATPVSYDQSSQVSVPEASGFGPAYW-AAVAHESSNQVYDASSQAYVPA 122
+P +P+Y+ T +Y +S P + + PAY + A+ ++ Y +S AY P
Sbjct: 1719 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYTPAYSPTSPAYSPTSPAYSPTSPAYSPT 1778
Query: 121 VP--HSIAPCYAP------PPAVSYDPSSQVYVPEASALGPA 20
P +P Y+P P + +Y P+S Y P + + PA
Sbjct: 1779 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPA 1820
>gb|AAK00310.1|AF315820_1 DNA-dependent RNA polymerase II largest subunit RPB1 [Glaucosphaera
vacuolata]
Length = 1746
Score = 57.0 bits (136), Expect = 6e-06
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Frame = -2
Query: 433 ASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQAFVTAAP--HNVAPSY 266
A+S PT T Y ++ + P ++ P S Y +S A+ +P +P+Y
Sbjct: 1594 AASPGYSPTSPT-----YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTY 1648
Query: 265 AATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYVPAVPH--SIAPCYA 92
+ T +Y +S + P + PA V++ S+ Y SS Y P+ PH +P Y+
Sbjct: 1649 SPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHYS 1708
Query: 91 P------PPAVSYDPSSQVYVPEASALGPA 20
P P + Y PSS Y P + A P+
Sbjct: 1709 PSSPQYSPSSPQYSPSSPAYSPSSPAYSPS 1738
>ref|XP_011197310.1| PREDICTED: skin secretory protein xP2-like [Bactrocera dorsalis]
Length = 279
Score = 56.6 bits (135), Expect = 8e-06
Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Frame = -2
Query: 439 YDASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLSYDTSSQAFVTAAPHNVAPSYAA 260
Y A + A P+Y S + Y A A A P SY +S+ ++ AP APSY +
Sbjct: 47 YSAPAPAPAPSYGGSSSSSYSAPAPAPAP--------SYGSSAPSYSAPAP---APSYGS 95
Query: 259 TPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAY-VPAVPHSIAPCY-APP 86
+ SY + P G P+Y A S Y +S+ +Y PA P AP Y AP
Sbjct: 96 SAPSYSAPAPAPAPSYGGSAPSYSAPAPAPS----YGSSAPSYSAPAAP---APSYSAPA 148
Query: 85 PAVSYD-------------PSSQVYVPEASALGPAY 17
PA SY P++ Y P A A P+Y
Sbjct: 149 PASSYSAPAAAAPSYAAPAPAAVAYAPPAPASAPSY 184
>gb|KQC45091.1| RPS15p component of the small (40S) ribosomal subunit [Saccharomyces
sp. 'boulardii']
Length = 1689
Score = 56.2 bits (134), Expect = 1e-05
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Frame = -2
Query: 481 SPYMTVHHTPHTLVYDASSHALPPTYHTSDTLVYDASAHAVPPLHQTHPPLS--YDTSSQ 308
SP+ P + + SS PT T Y ++ A P ++ P S Y +S
Sbjct: 1521 SPFGAYGEAPTSPGFGVSSPGFSPTSPT-----YSPTSPAYSPTSPSYSPTSPSYSPTSP 1575
Query: 307 AFVTAAPHNVAPSYAATPVSYDQSSQVSVPEASGFGPAYWAAVAHESSNQVYDASSQAYV 128
++ +P +PSY+ T SY +S P + + P + A+ ++ Y +S +Y
Sbjct: 1576 SYSPTSPSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPAYSPTSPSYSPTSPSYS 1632
Query: 127 PAVPH--SIAPCYAP------PPAVSYDPSSQVYVPEASALGP 23
P P +P Y+P P + SY P+S Y P + A P
Sbjct: 1633 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1675