BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00038446
         (4941 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...  1006   0.0  
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun...   993   0.0  
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun...   927   0.0  
ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prun...   907   0.0  
ref|XP_008234059.1| PREDICTED: uncharacterized protein LOC103333...   860   0.0  
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The...   837   0.0  
ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, part...   826   0.0  
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The...   814   0.0  
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     805   0.0  
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   803   0.0  
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 795   0.0  
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 795   0.0  
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   789   0.0  
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   788   0.0  
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         787   0.0  
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              784   0.0  
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   783   0.0  
ref|XP_013689613.1| PREDICTED: uncharacterized protein LOC106393...   778   0.0  
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  776   0.0  
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   774   0.0  

>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 473/745 (63%), Positives = 593/745 (79%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFK+K+GL+EWLVMPFGLSN PSTFMR+MNQVL+PF+  FVVVYFDDILIYS T+
Sbjct: 730  DEWKTAFKSKDGLFEWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTK 789

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHL HLR VL+ LRENKL++N+KKC+F    +LFLGF+VGE+GIQVD++K++ I +WP 
Sbjct: 790  EEHLVHLRQVLDVLRENKLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPA 849

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            PKT ++VRSF GLATFYRRF+R+FS+I API++CLKKGRFSWGEEQE SF  IKEKLCTA
Sbjct: 850  PKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLCTA 909

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL +F K+FEV+CDAS  G+GAVLSQ+ +P+ + S+KL ++RQ+W+ Y+ EFYAVVR
Sbjct: 910  PVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVR 969

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            ALK WEHYL+ +EF+L++DHQALKY+++QK ++ MHARWVTF+QKF+F++KH SG  N+V
Sbjct: 970  ALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRV 1029

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFKG 3860
            ADALSRRA+LL  L  E+VGFE +KE YEGD+DFGEIW       P  DY + +GYLFKG
Sbjct: 1030 ADALSRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKCTNQEPMADYFLNEGYLFKG 1089

Query: 3859 NQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYICQ 3680
            NQLC+P +SLRE +IR+LHGG  S HLGR+ TI  + +R++WPQL+RDVG IV +CY CQ
Sbjct: 1090 NQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQ 1149

Query: 3679 ISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIACR 3500
             SKG+ QNTGLYM LP+P +IW+DL+M+FVLGLPRTQRG DS+ VVVDRFSKM+HFIACR
Sbjct: 1150 TSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACR 1209

Query: 3499 KTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQT 3320
            KT DAS +A LFFRE++RLHG+P +I SDRDTKF SHF   LWR  G+ LN SST H QT
Sbjct: 1210 KTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTAHPQT 1269

Query: 3319 DC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPKI 3140
            D  TEVTNRTLGNM+R +C EKPKQWD +LPQ+EF+YNS  + +T KSPF +VYT +P  
Sbjct: 1270 DGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQVEFAYNSAVHSATGKSPFSIVYTAMPNH 1329

Query: 3139 SLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGDL 2960
             +DL  +P     SVAA++LAE V  +  EV + L++ N  YKA  DKHRRV++F+ GD 
Sbjct: 1330 VVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADKHRRVKVFQEGDS 1389

Query: 2959 VMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRYF 2780
            VM+ LRK RFPVGTY KLK KK+GP ++  +INDNAYV+E+P  M ISN FNV D+Y + 
Sbjct: 1390 VMIFLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFR 1449

Query: 2779 PEGPLYTEAGSRSSLFAVGEPDTGR 2705
             +    T+    +   AV E + GR
Sbjct: 1450 EDEVEGTDVEQMADFIAV-ELEKGR 1473



 Score =  852 bits (2200), Expect = 0.0
 Identities = 408/755 (54%), Positives = 541/755 (71%)
 Frame = -2

Query: 2267 EKQGKIFIVHRSYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLG 2088
            E   KI +V +  L+   +  QR  +FR    +  K+C +I+D+GS EN +++ L + L 
Sbjct: 399  EGMEKITLVLQRVLLAPREEGQRHSIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQ 458

Query: 2087 LEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWL 1908
            L  E H +PY +GW+K G  + V +TC+VP+SIGK Y           D   ++ GRPW 
Sbjct: 459  LSTEPHVSPYSLGWVKKGPSVRVAETCRVPLSIGKHYRDEVLCDVIDMDACHILLGRPWQ 518

Query: 1907 YDTDVIHRGRSNSYEFMWGKTKIILIPGKRKSPEENVNMETRNMFHTVTGRELQEHIGEV 1728
            +D D   +GR N   F W   KI +   +   P   V   + +    ++  +      E+
Sbjct: 519  FDVDATFKGRDNVILFSWNNRKIAMTTTQPSKPSVEVKTRSSSFLTLISNEQ------EL 572

Query: 1727 DEGIALIVKGKAEENSELTHERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASL 1548
            +E +      +AE   ++  + V+ +L +F +L    LP+ +PP++DIQH IDLVPGASL
Sbjct: 573  NEAVK-----EAEGEGDIPQD-VQQILSQFQELFSENLPNELPPMRDIQHRIDLVPGASL 626

Query: 1547 PNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAIN 1368
             NL HYRMSP               K  IR+S+SPCAVP L + KKD +WRMC+DSRAIN
Sbjct: 627  QNLPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAIN 686

Query: 1367 KITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWL 1188
            KIT+KY FPIPRLED+LD L+G+K+FSKIDL++GYHQIRIR GDEWKTAFK+K+GL+EWL
Sbjct: 687  KITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWL 746

Query: 1187 VMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRAN 1008
            VMPFGLSN PSTFMR+MNQVL PF+  FVV+YFDDILIYS T+ EHL HLR +L+VLR N
Sbjct: 747  VMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLREN 806

Query: 1007 KLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFY 828
            KL++N+KKC+F    +LFLGF+VGE+G+QVD+EK++AI +WP PKT ++V SF GL TFY
Sbjct: 807  KLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFY 866

Query: 827  RRFIRNFSTIAAPITDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCE 648
            RRF+R+FS+I APIT+CLKKGRF+WGE QE S   IKEKLCTAPVLALP+F K+FEV+C+
Sbjct: 867  RRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECD 926

Query: 647  ASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILY 468
            AS  G+G VLSQ+ +PV + SEKL ++RQ+W+ Y+ EFYAVVRALK WEHYL+ +EF+L+
Sbjct: 927  ASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLF 986

Query: 467  SDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIE 288
            +DHQAL+++++QK ++ MHARWVTFLQKF+F++KH S   N+V +ALSRRA+L+  L  E
Sbjct: 987  TDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQE 1046

Query: 287  LVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRE 108
            +VGFE +KE YEGD+DFGEIW       P  DY + +GYLFKGNQLC+P  SLRE +IR+
Sbjct: 1047 VVGFECLKELYEGDADFGEIWTKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIRD 1106

Query: 107  LHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
            LH G  S HL R+ TI  + +R++WPQL+RDVG I
Sbjct: 1107 LHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTI 1141


>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
            gi|462402874|gb|EMJ08431.1| hypothetical protein
            PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  993 bits (2567), Expect = 0.0
 Identities = 469/745 (62%), Positives = 585/745 (78%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFK+K+GL+EWLVMPFGLSNAPSTFMR+MNQVL+PF+  FVVVYFDDILIYS T+
Sbjct: 738  DEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTK 797

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHL HLR VL+ LRENKLY+N+KKC+F    +LFLGF+VGENGIQVD++K++ I +WP 
Sbjct: 798  EEHLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPA 857

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            PKT ++VRSF GLATFY RF+R+FS+IAAPI++CLKKGRFSWGEEQE SF  IKEKLCTA
Sbjct: 858  PKTVSEVRSFHGLATFYMRFVRHFSSIAAPITECLKKGRFSWGEEQERSFADIKEKLCTA 917

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL +F K+FEV+CDAS  G+GAVL Q+ +P+ + S+KL ++RQ+W+ Y+ EFYAVVR
Sbjct: 918  PVLALPNFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVR 977

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            ALK WEHYL+ +EF+L++DHQALKY+++QK ++ MHARWVTF+QKF+F++KH SG  N+V
Sbjct: 978  ALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRV 1037

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFKG 3860
            ADALSRRA+LL  L  E+VGFE +KE YEGD DF EIW       P  DY + +GYLFKG
Sbjct: 1038 ADALSRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMTDYFLTEGYLFKG 1097

Query: 3859 NQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYICQ 3680
            NQLC+P +SLRE +IR+LHGG  S HLGR+ TI  + +R++WPQL+RDVG IV +CY CQ
Sbjct: 1098 NQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQ 1157

Query: 3679 ISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIACR 3500
             SKG+ QNTGLYM LP+P +IW+DL+M+FVLG PRTQR  DS+ VV DRFSKM+HFIAC+
Sbjct: 1158 TSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGFPRTQRRVDSVFVVADRFSKMAHFIACK 1217

Query: 3499 KTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQT 3320
            KT DAS +A LFFRE++RLHG+P +I SDRDTKF SHF   LWR  G+ LN SST H QT
Sbjct: 1218 KTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTAHPQT 1277

Query: 3319 DC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPKI 3140
            D  TEVTNRTLGNM+R +C EKPKQWD +LPQMEF+YNS  + +T KSPF +VYT  P  
Sbjct: 1278 DGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQMEFAYNSAVHSATGKSPFSIVYTATPNH 1337

Query: 3139 SLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGDL 2960
             +DL  +P     SVAA++LAE V  +  EV + L++ N  YKA  D+HRRV++F+ GD 
Sbjct: 1338 VVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDS 1397

Query: 2959 VMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRYF 2780
            VMV LRK RFP GTY KLK KK+GP ++  +INDNAY +E+P  M ISN FNV D+Y + 
Sbjct: 1398 VMVFLRKERFPAGTYSKLKPKKYGPYKVLKRINDNAYDIELPDSMGISNIFNVADLYEFR 1457

Query: 2779 PEGPLYTEAGSRSSLFAVGEPDTGR 2705
             +    T+    +   AV E + GR
Sbjct: 1458 EDEVEGTDVEQMTDFIAV-ELEKGR 1481



 Score =  838 bits (2165), Expect = 0.0
 Identities = 404/751 (53%), Positives = 536/751 (71%)
 Frame = -2

Query: 2255 KIFIVHRSYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEE 2076
            KI +V +  L+   +  QR  +FR    +  K+C +I+D+GS EN +++ L + L L  E
Sbjct: 414  KITLVLQRVLLAPKEEGQRHNIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQLSTE 473

Query: 2075 EHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTD 1896
             H +PY +GW+K G  + V +TC+VP+SIGK Y           D   ++ GRPW +D D
Sbjct: 474  PHVSPYSLGWVKKGPSVRVAETCRVPLSIGKHYRDDVLCDVIDMDACHILLGRPWQFDVD 533

Query: 1895 VIHRGRSNSYEFMWGKTKIILIPGKRKSPEENVNMETRNMFHTVTGRELQEHIGEVDEGI 1716
               +GR N   F W   KI +   +   P     + + +    ++  +      E++E +
Sbjct: 534  ATFKGRDNVILFSWNNRKIAMATTQ---PSRKQELRSSSFLTLISNEQ------ELNEAV 584

Query: 1715 ALIVKGKAEENSELTHERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLA 1536
                  +AE   ++  + V+ +L +F +L    LP+ +PP++DIQH IDLV GASLPNL 
Sbjct: 585  K-----EAEGEGDIPQD-VQQILSQFQELLSENLPNELPPMRDIQHRIDLVHGASLPNLP 638

Query: 1535 HYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITI 1356
            HYRMSP               K  IR+S+SPCAVP L + KKD +WRMC+DSRA+NKI +
Sbjct: 639  HYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAVNKIKV 698

Query: 1355 KYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPF 1176
            KY F IPRLED+LD L+G+K+FSKIDL++GYHQIRIR GDEWKTAFK+K+GL+EWLVMPF
Sbjct: 699  KYRFSIPRLEDILDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWLVMPF 758

Query: 1175 GLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYM 996
            GLSNAPSTFMR+MNQVL PF+  FVV+YFDDILIYS T+ EHL HLR +L+VLR NKLY+
Sbjct: 759  GLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYV 818

Query: 995  NIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFI 816
            N+KKC+F    +LFLGF+VGENG+QVD+EK++AI +WP PKT ++V SF GL TFY RF+
Sbjct: 819  NLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYMRFV 878

Query: 815  RNFSTIAAPITDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMR 636
            R+FS+IAAPIT+CLKKGRF+WGE QE S   IKEKLCTAPVLALP+F K+FEV+C+AS  
Sbjct: 879  RHFSSIAAPITECLKKGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGV 938

Query: 635  GIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQ 456
            G+G VL Q+ +PV + SEKL ++RQ+W+ Y+ EFYAVVRALK WEHYL+ +EF+L++DHQ
Sbjct: 939  GVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQ 998

Query: 455  ALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGF 276
            AL+++++QK ++ MHARWVTFLQKF+F++KH S   N+V +ALSRRA+L+  L  E+VGF
Sbjct: 999  ALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGF 1058

Query: 275  EVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSG 96
            E +KE YEGD DF EIW       P  DY + +GYLFKGNQLC+P  SLRE +IR+LH G
Sbjct: 1059 ECLKELYEGDDDFREIWTKCTNQEPMTDYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGG 1118

Query: 95   SFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
              S HL R+ TI  + +R++WPQL+RDVG I
Sbjct: 1119 GLSGHLGRDKTIAGMEERFYWPQLKRDVGTI 1149


>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
            gi|462417202|gb|EMJ21939.1| hypothetical protein
            PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  927 bits (2397), Expect = 0.0
 Identities = 446/746 (59%), Positives = 559/746 (74%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFK+K+GL+EWLVMPFGLSNAPSTFMR+MNQVL+PF+  FVVVYFDDILIYS T+
Sbjct: 720  DEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTK 779

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHL HLR VL+ LRENKLYMN+KKC+F    +LFLGF+VGENGIQVD++K++ I +WPT
Sbjct: 780  EEHLVHLRQVLDVLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPT 839

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            PK  ++VRSF GLATFYRRF+R+FS+I API++CLKKGRFSWG+EQE SF  IKEKLCTA
Sbjct: 840  PKIVSEVRSFHGLATFYRRFVRHFSSITAPITECLKKGRFSWGDEQERSFADIKEKLCTA 899

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL +F K+FEV+CDAS  G+GAVLSQ+ +P+ + S+KL ++ Q+W+ Y+ EFYAVVR
Sbjct: 900  PVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDACQKWSTYDQEFYAVVR 959

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            ALK WEHYL+ +EF+L++DHQAL              RWVTF+QKF+F+++H SG  N+V
Sbjct: 960  ALKQWEHYLIQKEFVLFTDHQAL--------------RWVTFLQKFSFVIRHTSGKTNRV 1005

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFKG 3860
             DALSRRA+LL     E+VGFE +KE YEGD DF EIW       P  DY + +GYLFKG
Sbjct: 1006 VDALSRRASLLVTQTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADYFLNEGYLFKG 1065

Query: 3859 NQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYICQ 3680
            NQLC+P +SLRE +I++LHGG  S HLGR+ TI  + +R++WPQL+RDVG IV +CY CQ
Sbjct: 1066 NQLCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMKERFYWPQLKRDVGTIVRKCYTCQ 1125

Query: 3679 ISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIACR 3500
             SKG+ QNTGLYM LP+P +IW+DL+M+FVLGLPRTQRG DS+ VVVDRFS M+HFIAC+
Sbjct: 1126 TSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGMDSVYVVVDRFSNMAHFIACK 1185

Query: 3499 KTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQT 3320
            KTDDAS +A L FRE++RLHG+P +I SDRD KF SHF   LWR  G+ LN SST H QT
Sbjct: 1186 KTDDASNIAKLVFREVVRLHGVPTSITSDRDAKFLSHFWITLWRLFGTTLNRSSTTHPQT 1245

Query: 3319 DC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPKI 3140
            D  TEVT RTLGNM                  +EF+YNS  + +T KSPF +VYT +P  
Sbjct: 1246 DSQTEVTTRTLGNM------------------VEFAYNSKIHSATGKSPFSIVYTAIPNH 1287

Query: 3139 SLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGDL 2960
             +DL  +P     SVAA++LAE V  +  EV + L++ N  YKA  D+HRRV++F+ GD 
Sbjct: 1288 VVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDS 1347

Query: 2959 VMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRYF 2780
            VM+ LRK RFPVGTY KLK KK+GP ++  +INDNAYV+E+P  M I N FNV D+Y + 
Sbjct: 1348 VMIFLRKERFPVGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGIFNIFNVADLYEFR 1407

Query: 2779 PEGPLYTEAGSRSSLFAVGEPDTGRM 2702
             +  +Y +  S SS   V   D  +M
Sbjct: 1408 EDEVIYPDHNSGSSSSEVEGTDVEQM 1433



 Score =  809 bits (2090), Expect = 0.0
 Identities = 402/765 (52%), Positives = 534/765 (69%), Gaps = 5/765 (0%)
 Frame = -2

Query: 2282 EDRLMEKQGKIFIVHRSYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGL 2103
            E  + E+  +I +V +  L+   +  QR  + R    +  K+C +I+D+GS EN +++ L
Sbjct: 369  EFAIEERMERIILVLQRVLLAPKEEGQRHSICRSLCSIKNKVCDVIVDNGSCENFVSKKL 428

Query: 2102 SKTLGLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIF 1923
             + L L  E H  PY +GW+K G  + V +T  VP+SIGK Y           D   ++ 
Sbjct: 429  VEHLQLSTEPHVRPYSLGWVKKGPSVRVAETYSVPLSIGKHYIDDVLCDVIDMDACHILL 488

Query: 1922 GRPWLYDTDVIHRGRSNSYEFMWGKTKIILIPGKRKSPEENVNMETRNM-FHTVTG--RE 1752
            G+ W +D D  ++GR N   F W   KI +     K  +++V  +TR+  F T+    +E
Sbjct: 489  GQLWQFDVDATYKGRDNVILFSWNNRKIAM--ATTKPSKQSVEPKTRSSSFLTLISSEQE 546

Query: 1751 LQEHIGEVDEGIALIVKG--KAEENSELTHERVRPLLDEFHDLGPAELPSGVPPLQDIQH 1578
            L + + E +    L++KG  K         + V+ +L +F +L   +LP+ +P ++DIQH
Sbjct: 547  LNKVVKEAEYFCPLVLKGLLKLGRGESDIPQDVQKILSQFQELLSEKLPNELPSMRDIQH 606

Query: 1577 HIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSW 1398
             IDLVPGA+LPNL HYRMSP              +K  IR+S+SPCAVP L + KKD +W
Sbjct: 607  RIDLVPGANLPNLPHYRMSPKENDILREQIEELLQKGFIRESLSPCAVPVLLVPKKDKTW 666

Query: 1397 RMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAF 1218
            RMC+DSRAINKIT+K  FPIPRLED+LD L+G+++FSKIDL++GYHQIRIR GDEWKTAF
Sbjct: 667  RMCVDSRAINKITVKSRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAF 726

Query: 1217 KTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHL 1038
            K+K+GL+EWLVMPFGLSNAPSTFMR+MNQVL PF+  FVV+YFDDILIYS T+ EHL HL
Sbjct: 727  KSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHL 786

Query: 1037 RSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDV 858
            R +L+VLR NKLYMN+KKC+F    +LFLGF+VGENG+QVD+EK++AI +WPTPK  ++V
Sbjct: 787  RQVLDVLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPTPKIVSEV 846

Query: 857  CSFLGLETFYRRFIRNFSTIAAPITDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPD 678
             SF GL TFYRRF+R+FS+I APIT+CLKKGRF+WG+ QE S   IKEKLCTAPVLALP+
Sbjct: 847  RSFHGLATFYRRFVRHFSSITAPITECLKKGRFSWGDEQERSFADIKEKLCTAPVLALPN 906

Query: 677  FSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEH 498
            F K+FEV+C+AS  G+G VLSQ+ +PV + SEKL ++ Q+W+ Y+ EFYAVVRALK WEH
Sbjct: 907  FEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDACQKWSTYDQEFYAVVRALKQWEH 966

Query: 497  YLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRR 318
            YL+ +EF+L++DHQAL              RWVTFLQKF+F+++H S   N+VV+ALSRR
Sbjct: 967  YLIQKEFVLFTDHQAL--------------RWVTFLQKFSFVIRHTSGKTNRVVDALSRR 1012

Query: 317  ATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPR 138
            A+L+     E+VGFE +KE YEGD DF EIW       P  DY + +GYLFKGNQLC+P 
Sbjct: 1013 ASLLVTQTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADYFLNEGYLFKGNQLCIPV 1072

Query: 137  ISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
             SLRE +I++LH G  S HL R+ TI  + +R++WPQL+RDVG I
Sbjct: 1073 SSLREKLIQDLHGGGLSGHLGRDKTIAGMKERFYWPQLKRDVGTI 1117


>ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
            gi|462416846|gb|EMJ21583.1| hypothetical protein
            PRUPE_ppa021778mg [Prunus persica]
          Length = 1384

 Score =  907 bits (2344), Expect = 0.0
 Identities = 435/743 (58%), Positives = 556/743 (74%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4930 KTAFKTKEG-LYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTETE 4754
            K   ++++G + +WLVMPFGLSNAPSTFMR+MNQVL+PF+  FVVVYFDDILIYS T+ E
Sbjct: 657  KIDLRSEQGRIIKWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEE 716

Query: 4753 HLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPTPK 4574
            HL HLR VL+ LRENKLY+N+KKC+F    +LFLGF+VGENGIQVD++K++ I +WP PK
Sbjct: 717  HLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPK 776

Query: 4573 TPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTAPV 4394
            T ++VRSF GLATFYRRF+R+FS+I API++CLKKGRFSWGEEQE SF  IKEKLCTAPV
Sbjct: 777  TVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQERSFADIKEKLCTAPV 836

Query: 4393 LALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVRAL 4214
            LAL +F K+FEV+CDAS  G+ AVLSQ+ +P+ + S+KL ++RQ+W+ Y+ EFYAVVRAL
Sbjct: 837  LALPNFEKVFEVECDASGVGVEAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRAL 896

Query: 4213 KHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKVAD 4034
            K WEHYL+ +EF+L++DHQALKY+++QK ++ MHARWVTF+QKF+F++KH SG  N+VAD
Sbjct: 897  KQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVAD 956

Query: 4033 ALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFKGNQ 3854
            ALSRRA++L  L  E+VGFE +KE YEGD+DF EIW       P  DY + +GYLFKGNQ
Sbjct: 957  ALSRRASMLITLTQEVVGFECLKELYEGDADFREIWTKCTNQEPMADYFLNEGYLFKGNQ 1016

Query: 3853 LCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYICQIS 3674
            LC+P +SLRE +I++LHGG  S HLGR+ TI  + +R++WPQL+RDVG IV +CY CQ S
Sbjct: 1017 LCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTS 1076

Query: 3673 KGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIACRKT 3494
            KG+ QNT LYM LP+P +IW+DL+M+FVL                          AC+K 
Sbjct: 1077 KGQVQNTRLYMPLPVPNDIWQDLAMDFVL--------------------------ACKKI 1110

Query: 3493 DDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQTDC 3314
             DAS +A LFFRE++RLHG+P +I SDRDTKF SHF   LWR  G+ LN SST H QTD 
Sbjct: 1111 ADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTAHPQTDG 1170

Query: 3313 *TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPKISL 3134
             TEVTNRTLGNM+R +C EKPKQWD +LPQ EF+YNS  + +T KSPF +VYT  P   +
Sbjct: 1171 QTEVTNRTLGNMVRSVCGEKPKQWDYALPQAEFAYNSAVHSATGKSPFSIVYTATPNHVV 1230

Query: 3133 DLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGDLVM 2954
            DL  +P     SVAA++LAE V  +  EV + L++ N  YKA  D+HRRV++F+ GD VM
Sbjct: 1231 DLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVM 1290

Query: 2953 VHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRYFPE 2774
            + LRK RFP GTY KLK KK+GP ++  +INDNAYV+E+P  M ISN FNV D+Y +  +
Sbjct: 1291 IFLRKERFPAGTYSKLKPKKYGPYKVLKRINDNAYVIELPDSMGISNIFNVADLYEFRED 1350

Query: 2773 GPLYTEAGSRSSLFAVGEPDTGR 2705
                T+    +   AV E + GR
Sbjct: 1351 EVEGTDVDQMADFIAV-ELEKGR 1372



 Score =  697 bits (1800), Expect = 0.0
 Identities = 330/553 (59%), Positives = 423/553 (76%)
 Frame = -2

Query: 1661 VRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXX 1482
            V+ +L +F +L    LP+ +PP++DIQH IDLVPGASLPNL HYRMSP            
Sbjct: 532  VQQILSQFQELLSENLPNELPPMRDIQHQIDLVPGASLPNLPHYRMSPKENDILREQIEE 591

Query: 1481 XXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAG 1302
               K  IR+S+SPCAVP L + KKD +WRMC+DSRAINKIT+KY FPIPRLED+LD L+G
Sbjct: 592  LLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKYRFPIPRLEDMLDVLSG 651

Query: 1301 AKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLN 1122
            +K+FSKIDL++   +I                   +WLVMPFGLSNAPSTFMR+MNQVL 
Sbjct: 652  SKVFSKIDLRSEQGRI------------------IKWLVMPFGLSNAPSTFMRLMNQVLR 693

Query: 1121 PFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFI 942
            PF+  FVV+YFDDILIYS T+ EHL HLR +L+VLR NKLY+N+KKC+F    +LFLGF+
Sbjct: 694  PFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFV 753

Query: 941  VGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKGR 762
            VGENG+QVD+EK++AI +WP PKT ++V SF GL TFYRRF+R+FS+I APIT+CLKKGR
Sbjct: 754  VGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGR 813

Query: 761  FTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSE 582
            F+WGE QE S   IKEKLCTAPVLALP+F K+FEV+C+AS  G+  VLSQ+ +PV + SE
Sbjct: 814  FSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVEAVLSQDKRPVAFFSE 873

Query: 581  KLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARW 402
            KL ++RQ+W+ Y+ EFYAVVRALK WEHYL+ +EF+L++DHQAL+++++QK ++ MHARW
Sbjct: 874  KLSDARQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARW 933

Query: 401  VTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWE 222
            VTFLQKF+F++KH S   N+V +ALSRRA+++  L  E+VGFE +KE YEGD+DF EIW 
Sbjct: 934  VTFLQKFSFVIKHTSGKTNRVADALSRRASMLITLTQEVVGFECLKELYEGDADFREIWT 993

Query: 221  TLKQGRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDR 42
                  P  DY + +GYLFKGNQLC+P  SLRE +I++LH G  S HL R+ TI  + +R
Sbjct: 994  KCTNQEPMADYFLNEGYLFKGNQLCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMEER 1053

Query: 41   YFWPQLRRDVGKI 3
            ++WPQL+RDVG I
Sbjct: 1054 FYWPQLKRDVGTI 1066



 Score = 75.9 bits (185), Expect = 4e-10
 Identities = 37/97 (38%), Positives = 59/97 (60%)
 Frame = -2

Query: 2267 EKQGKIFIVHRSYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLG 2088
            E   KI +V +  L+   +  QR  +FR    +  K+C +I+D+GS EN +++ L + L 
Sbjct: 403  EGMEKITLVLQRVLLAPKEEGQRHSIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQ 462

Query: 2087 LEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKY 1977
            L  E H +PY +GW++ G  + V +TC+VP+SIGK Y
Sbjct: 463  LLTEPHVSPYSLGWVQKGPSVRVAETCRVPLSIGKHY 499


>ref|XP_008234059.1| PREDICTED: uncharacterized protein LOC103333039 [Prunus mume]
          Length = 1268

 Score =  860 bits (2221), Expect = 0.0
 Identities = 414/760 (54%), Positives = 548/760 (72%), Gaps = 5/760 (0%)
 Frame = -2

Query: 2267 EKQGKIFIVHRSYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLG 2088
            E   KI +V +  L+   +  QR  +FR    +  K+C +I+D+GS EN +++ L + L 
Sbjct: 410  EGMEKITLVLQRVLLAPKEEGQRHSIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQ 469

Query: 2087 LEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWL 1908
            L  E H +PY +GW+K G  + V +TC+VP+SIGK Y           D   ++ GRPW 
Sbjct: 470  LSTEPHVSPYSLGWVKKGPSVRVAETCRVPLSIGKHYRDEILCDVIDMDACHILLGRPWQ 529

Query: 1907 YDTDVIHRGRSNSYEFMWGKTKIILI---PGKRKSPEENVNMETRNMFHTVTGRELQEHI 1737
            +D D   +GR N   F W   KI +    P K+    +  +     + H+   +EL E +
Sbjct: 530  FDVDATFKGRDNVILFSWNNRKIAMATTQPAKQSVEPKTRSSSFLTLIHSE--QELNEAV 587

Query: 1736 GEVDEGIALIVKG--KAEENSELTHERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLV 1563
             E +    L++KG  K         + V+ +L++F +L    LP+ +PP++DIQH IDLV
Sbjct: 588  KEAECFCPLVLKGLLKIGGGEGDIPQDVQQILNQFQELLSENLPNELPPMRDIQHRIDLV 647

Query: 1562 PGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCID 1383
            PGASLPNL HYRMSP               K  IR+S+SPCAVP L + KKD +WRMC+D
Sbjct: 648  PGASLPNLPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVD 707

Query: 1382 SRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEG 1203
            SRAINKIT+KY FPIPRLED+LD L+G+++FSKIDL++GYHQIRIR GDEWKTAFK+K+G
Sbjct: 708  SRAINKITVKYRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDG 767

Query: 1202 LYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILE 1023
            L+EWLVMPFGLSNAPSTFMR+MNQVL PF+  FVV+YFDDILIYS T+ EHL HLR +L+
Sbjct: 768  LFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLD 827

Query: 1022 VLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLG 843
            VLR NKLY+N+KKC+F    +LFLGF+VGENG+QVD+EK++AI +WP PKT ++V SF G
Sbjct: 828  VLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHG 887

Query: 842  LETFYRRFIRNFSTIAAPITDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLF 663
            L TFYRRF+++FST+AAPIT+CLKKGRF+WGE QE S  +IKEKLCTAPVLALP+F K+F
Sbjct: 888  LATFYRRFVKHFSTVAAPITECLKKGRFSWGEEQERSFAEIKEKLCTAPVLALPNFEKVF 947

Query: 662  EVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHR 483
            EV+C+AS  G+G VLSQ+ +P+ + SEKL ++RQ+W+ Y+ EFYAVVRALK WEHYL+ +
Sbjct: 948  EVECDASGVGVGAVLSQDKRPIAFFSEKLSDARQKWSTYDQEFYAVVRALKQWEHYLIQK 1007

Query: 482  EFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT 303
            EF+L++DHQAL+++++QK ++ MHARW+TFLQKF+F++KH S   N+V +ALSRRA+L+ 
Sbjct: 1008 EFVLFTDHQALKYINSQKNIDKMHARWMTFLQKFSFVIKHTSGKTNRVADALSRRASLLV 1067

Query: 302  *LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPRISLRE 123
             L  E+VGFE +KE Y GD+DF EIW       P  DY + +GYLFKGNQLC+P  SLRE
Sbjct: 1068 TLTQEVVGFECLKELYAGDNDFREIWIKCTNQEPMADYFLNEGYLFKGNQLCIPVSSLRE 1127

Query: 122  AVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
             +IR+LH G  S HL R+ TI L+ DR++WPQL+RDVG I
Sbjct: 1128 KLIRDLHGGGLSGHLGRDKTIALLEDRFYWPQLKRDVGTI 1167



 Score =  722 bits (1864), Expect = 0.0
 Identities = 329/482 (68%), Positives = 411/482 (85%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFK+K+GL+EWLVMPFGLSNAPSTFMR+MNQVL+PF+  FVVVYFDDILIYS T+
Sbjct: 756  DEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTK 815

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHL HLR VL+ LRENKLY+N+KKC+F    +LFLGF+VGENGIQVD++K++ I +WP 
Sbjct: 816  EEHLVHLRQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPA 875

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            PKT ++VRSF GLATFYRRF+++FST+AAPI++CLKKGRFSWGEEQE SF +IKEKLCTA
Sbjct: 876  PKTVSEVRSFHGLATFYRRFVKHFSTVAAPITECLKKGRFSWGEEQERSFAEIKEKLCTA 935

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL +F K+FEV+CDAS  G+GAVLSQ+ +P+ + S+KL ++RQ+W+ Y+ EFYAVVR
Sbjct: 936  PVLALPNFEKVFEVECDASGVGVGAVLSQDKRPIAFFSEKLSDARQKWSTYDQEFYAVVR 995

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            ALK WEHYL+ +EF+L++DHQALKY+++QK ++ MHARW+TF+QKF+F++KH SG  N+V
Sbjct: 996  ALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWMTFLQKFSFVIKHTSGKTNRV 1055

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFKG 3860
            ADALSRRA+LL  L  E+VGFE +KE Y GD+DF EIW       P  DY + +GYLFKG
Sbjct: 1056 ADALSRRASLLVTLTQEVVGFECLKELYAGDNDFREIWIKCTNQEPMADYFLNEGYLFKG 1115

Query: 3859 NQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYICQ 3680
            NQLC+P +SLRE +IR+LHGG  S HLGR+ TI L+ DR++WPQL+RDVG IV +CYICQ
Sbjct: 1116 NQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIALLEDRFYWPQLKRDVGTIVRKCYICQ 1175

Query: 3679 ISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIACR 3500
             SKG+ QNTGLYM LP+P +IW+DL+M+FVLGLPRTQRG DS+ VVVDRFSKM+H IAC+
Sbjct: 1176 TSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHVIACK 1235

Query: 3499 KT 3494
            KT
Sbjct: 1236 KT 1237


>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  837 bits (2162), Expect = 0.0
 Identities = 398/721 (55%), Positives = 531/721 (73%), Gaps = 2/721 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKT +GL+EWLVMPFGLSNAPSTFMR+M +VLKPF+N FVVVYFDDILIYS T+
Sbjct: 645  DEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTK 704

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +HLKHLR VLE L++ +LY+N+KKCSFM   ++FLGFIV   G++ D +K+R I EWP 
Sbjct: 705  EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPA 764

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            P +  +VRSF GLA+FYRRFIRNFS+I +PI++ LKK  F W    + +F+++K  +  A
Sbjct: 765  PTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKALMTEA 824

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL DF KLF V+CDAS  GIGAVLSQ+ +P+E+ S+KL +SR+R++ Y+ EFYA+VR
Sbjct: 825  PVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVR 884

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            A++HW+HYL +REF +YSDHQAL+YL +QK ++  HA+W +F+ +FNF LK+KSG  N V
Sbjct: 885  AIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTV 944

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQD--YHVQDGYLF 3866
            ADALSRR  +L+ +  ++ GFE +K  Y  DS F +I   L+     ++  Y + + YLF
Sbjct: 945  ADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLF 1004

Query: 3865 KGNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYI 3686
            KGNQLC+P  SLRE +IRELHG     H GR+ T+ +V+DRY+WP++RRDV ++V+RC  
Sbjct: 1005 KGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMRRDVERLVKRCPA 1064

Query: 3685 CQISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIA 3506
            C   KG AQNTGLY+ LP P+  W  LSM+FVLGLP+T +G DSI VVVDRFSKM+HFI 
Sbjct: 1065 CLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTTKGFDSIFVVVDRFSKMAHFIP 1124

Query: 3505 CRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHS 3326
            C +T DA+ +A LFFREI+ LHG+P +IVSDR  KF  +F   LWR+ G++L +SSTCH 
Sbjct: 1125 CFRTSDATHIAELFFREIVILHGIPTSIVSDRHVKFMGYFWRTLWRKFGTELKYSSTCHP 1184

Query: 3325 QTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVP 3146
            QTD  TEV NR+LGNMLRCL    PK WD+ +PQ EF+YN+  N+S +K+PFE  Y   P
Sbjct: 1185 QTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKP 1244

Query: 3145 KISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVG 2966
            +  LDL  +P +   S   E  A+++ +IH+EV   L+ +N  Y    ++HRR Q FE G
Sbjct: 1245 QHVLDLVPLPQEARVSNEGELFADQIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEG 1304

Query: 2965 DLVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYR 2786
            D V+VHLR+ RFP GTY KLK +K GP ++  KI+ NAY++E+P ++ I+  FN+ D+Y 
Sbjct: 1305 DQVLVHLRQERFPKGTYHKLKSRKFGPCKVLKKISSNAYLIELPPELQINPIFNILDLYP 1364

Query: 2785 Y 2783
            +
Sbjct: 1365 F 1365



 Score =  757 bits (1954), Expect = 0.0
 Identities = 379/786 (48%), Positives = 527/786 (67%), Gaps = 8/786 (1%)
 Frame = -2

Query: 2336 ELSLRVCEMMDRILSDKKEDRLMEKQGKIFIVHR---SYLIDNTDGDQRKKLFRIPGVVN 2166
            EL   +  + D    + +E  +   QG+  +V R   + + +  +  +R+ +FR   V  
Sbjct: 274  ELGEELEPVYDEYKEEVEEIDVYPAQGESLVVRRIMTTTVNEEAEDWKRRSIFRTRVVCE 333

Query: 2165 GKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIG 1986
            GK+C ++ID GS EN+I++     L L   +HP PYK+GW+K G ++ VT  C V  ++G
Sbjct: 334  GKVCDLVIDGGSMENIISKEAVNKLKLPTNKHPYPYKIGWLKKGHEVPVTTQCLVKFTMG 393

Query: 1985 KKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSYEFMWGKTKIILIPGKRKSPE 1806
                          D   ++ GRPWLYD D++H+ + N+Y F     +  L P  R+  +
Sbjct: 394  DNSDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYP-LREETK 452

Query: 1805 ENVNMETRNMFHTVTGRELQEHIGEVDEGIALIVKG-KAEENSELTH--ERVRPLLDEFH 1635
            ++ N +   +   ++    +    E+    AL+ K  K+++ S+       ++ LL EF 
Sbjct: 453  KSANHKISKITRYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYPTEIQQLLKEFG 512

Query: 1634 DLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRD 1455
            +L   +LP  +PPL+ IQH IDLVPGA+LPNL  YRM P              EK ++R+
Sbjct: 513  ELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRAEVQRQVEELFEKGLVRE 572

Query: 1454 SMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDL 1275
            S SPCA PAL   KKDGSWRMC+DSRAINKITIKY FPIPRL+++LDQL G+++FSKIDL
Sbjct: 573  SKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDL 632

Query: 1274 KNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVI 1095
            K+GYHQIR+R+GDEWKTAFKT +GL+EWLVMPFGLSNAPSTFMR+M +VL PFLN FVV+
Sbjct: 633  KSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVV 692

Query: 1094 YFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVD 915
            YFDDILIYS T+ +HLKHLR +LEVL+  +LY+N+KKCSFM   ++FLGFIV   G++ D
Sbjct: 693  YFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPD 752

Query: 914  EEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKGRFTWGEYQES 735
             EK++AI EWP P +  +V SF GL +FYRRFIRNFS+I +PIT+ LKK  F W    + 
Sbjct: 753  PEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQK 812

Query: 734  SVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRW 555
            + +++K  +  APVLALPDF KLF V+C+AS  GIG VLSQ+G+P+E+ SEKL +SR+R+
Sbjct: 813  AFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRY 872

Query: 554  TVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNF 375
            + Y+ EFYA+VRA++HW+HYL +REF +YSDHQALR+L +QK ++  HA+W +FL +FNF
Sbjct: 873  STYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNF 932

Query: 374  ILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQG--RP 201
             LK+KS   N V +ALSRR  +++ +  ++ GFE +K  Y  DS F +I   L+      
Sbjct: 933  SLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAE 992

Query: 200  TLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLR 21
             L Y + + YLFKGNQLC+P  SLRE +IRELH      H  R+ T+ +V+DRY+WP++R
Sbjct: 993  NLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMR 1052

Query: 20   RDVGKI 3
            RDV ++
Sbjct: 1053 RDVERL 1058


>ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]
            gi|462395598|gb|EMJ01397.1| hypothetical protein
            PRUPE_ppa016013mg, partial [Prunus persica]
          Length = 1057

 Score =  826 bits (2134), Expect = 0.0
 Identities = 406/719 (56%), Positives = 515/719 (71%)
 Frame = -3

Query: 4855 TFMRMMNQVLKPFMNKFVVVYFDDILIYSKTETEHLKHLRSVLEALRENKLYMNIKKCSF 4676
            TFMR+MNQVL+PF+  FVVVYFDDILIYS T+ EHL HLR VL+ LRENKLY+N+KKC+F
Sbjct: 375  TFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDLLRENKLYVNLKKCTF 434

Query: 4675 MMKSILFLGFIVGENGIQVDEDKVRVIREWPTPKTPTDVRSFLGLATFYRRFIRNFSTIA 4496
                +LFLGF+VGENGIQVD++K++ I +WP PKT ++VRSF GLATFYRRF+       
Sbjct: 435  CTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFL------- 487

Query: 4495 APISDCLKKGRFSWGEEQEDSFQQIKEKLCTAPVLALRDFSKLFEVDCDASMRGIGAVLS 4316
                          G    +   + KEKL TAPVLAL +F K+FEV+CDAS  G+GAVLS
Sbjct: 488  --------------GRGAREKLCRYKEKLYTAPVLALPNFEKVFEVECDASGVGVGAVLS 533

Query: 4315 QEVKPLEYMSDKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALKYLST 4136
            Q+ +P+ + S+KL E+RQ+W+ Y+ EFYAV             +EF+L++DHQALKY+++
Sbjct: 534  QDKRPVAFFSEKLSEARQKWSTYDQEFYAV-------------KEFVLFTDHQALKYINS 580

Query: 4135 QKIVNPMHARWVTFIQKFNFILKHKSGSQNKVADALSRRATLLTELKIELVGFEIIKECY 3956
            QK ++ MHARWVTF+QKF+F +KH SG  N+VADALSRRA+LL  L  E+VGFE +KE Y
Sbjct: 581  QKNIDKMHARWVTFLQKFSFFIKHTSGKTNRVADALSRRASLLVTLTQEVVGFECLKELY 640

Query: 3955 EGDSDFGEIWETLKQGRPRQDYHVQDGYLFKGNQLCLPRTSLREAVIRELHGGSFSAHLG 3776
            EGD DF EIW       P  DY + +GYLFKGNQLC+P +SLRE +IR+LHGG F     
Sbjct: 641  EGDDDFREIWTKCTNQEPVADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGF----- 695

Query: 3775 REATIDLVSDRYFWPQLRRDVGKIVERCYICQISKGRAQNTGLYMLLPIPENIWEDLSME 3596
                        +WPQL+RD+G IV +CY CQ SKG+ QNTGLYM LP+P +IW+DL+M+
Sbjct: 696  ------------YWPQLKRDIGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMD 743

Query: 3595 FVLGLPRTQRGKDSIMVVVDRFSKMSHFIACRKTDDASGVAGLFFREIIRLHGMPKTIVS 3416
            FVLGLPRTQ G DS+ VVVDRFSKM+HFIAC+KT DAS +A LFFRE++RLHG+P +I S
Sbjct: 744  FVLGLPRTQSGVDSVFVVVDRFSKMTHFIACKKTADASNIAKLFFREVVRLHGVPTSITS 803

Query: 3415 DRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQTDC*TEVTNRTLGNMLRCLCAEKPKQWDV 3236
            +RDTKF SHF   LWR  G+ LN S+T H QTD  TEVTNRTLGNM+R +C EKPK+WD 
Sbjct: 804  NRDTKFLSHFWITLWRLFGTTLNRSNTAHPQTDGQTEVTNRTLGNMVRSVCGEKPKRWDY 863

Query: 3235 SLPQMEFSYNSMKNKSTRKSPFEVVYTQVPKISLDLASIPGDPDKSVAAEHLAERVTQIH 3056
            +LPQMEF+YNS  + +T KSPF +VYT +P   +DL  +P     SVAA++LAE V  + 
Sbjct: 864  ALPQMEFAYNSAVHSATGKSPFSIVYTAIPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVR 923

Query: 3055 KEVTEHLQRANEAYKARVDKHRRVQIFEVGDLVMVHLRKNRFPVGTYGKLKHKKHGPVRI 2876
             EV + L++ N  YKA  D+HRRV++F+ GD VM+ LRK RFPVGTY KLK KK+GP ++
Sbjct: 924  DEVKQKLEQTNAKYKAAADRHRRVKVFQEGDSVMIFLRKERFPVGTYSKLKPKKYGPYKV 983

Query: 2875 SWKINDNAYVVEIPSDMNISNTFNVYDIYRYFPEGPLYTEAGSRSSLFAVGEPDTGRML 2699
              +INDNAYV+E+P  M ISN FNV D+Y +  +  LY    S SS   V   D  +M+
Sbjct: 984  LKRINDNAYVIELPDSMGISNIFNVADLYEFLEDEVLYPYYNSGSSSSEVEGTDVEQMV 1042



 Score =  572 bits (1474), Expect = e-159
 Identities = 288/553 (52%), Positives = 373/553 (67%)
 Frame = -2

Query: 1661 VRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXX 1482
            V+ +L +F +L   +LP+ +PP++DIQH IDLVPGASLPNL HYRMSP            
Sbjct: 227  VQQILSQFQELLSEKLPNELPPMRDIQHRIDLVPGASLPNLPHYRMSPKENDILREQIEE 286

Query: 1481 XXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAG 1302
              +K  IR S+SPCAVP L + KKD +WRMC+DSRAINKIT+KY FPIPRLED+LD L+G
Sbjct: 287  LLQKGFIRKSLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKYRFPIPRLEDMLDVLSG 346

Query: 1301 AKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLN 1122
            +++FSKIDL++GYHQIRIR G ++                         TFMR+MNQVL 
Sbjct: 347  SRVFSKIDLRSGYHQIRIRPGTDYLNG---------------------CTFMRLMNQVLR 385

Query: 1121 PFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFI 942
            PF+  FVV+YFDDILIYS T+ EHL HLR +L++LR NKLY+N+KKC+F    +LFLGF+
Sbjct: 386  PFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDLLRENKLYVNLKKCTFCTNKLLFLGFV 445

Query: 941  VGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKGR 762
            VGENG+QVD+EK++AI +WP PKT ++V SF GL TFYRRF+                  
Sbjct: 446  VGENGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFL------------------ 487

Query: 761  FTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSE 582
               G      + + KEKL TAPVLALP+F K+FEV+C+AS  G+G VLSQ+ +PV + SE
Sbjct: 488  ---GRGAREKLCRYKEKLYTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSE 544

Query: 581  KLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARW 402
            KL E+RQ+W+ Y+ EFYAV             +EF+L++DHQAL+++++QK ++ MHARW
Sbjct: 545  KLSEARQKWSTYDQEFYAV-------------KEFVLFTDHQALKYINSQKNIDKMHARW 591

Query: 401  VTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWE 222
            VTFLQKF+F +KH S   N+V +ALSRRA+L+  L  E+VGFE +KE YEGD DF EIW 
Sbjct: 592  VTFLQKFSFFIKHTSGKTNRVADALSRRASLLVTLTQEVVGFECLKELYEGDDDFREIWT 651

Query: 221  TLKQGRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDR 42
                  P  DY + +GYLFKGNQLC+P  SLRE +IR+LH G F                
Sbjct: 652  KCTNQEPVADYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGF---------------- 695

Query: 41   YFWPQLRRDVGKI 3
             +WPQL+RD+G I
Sbjct: 696  -YWPQLKRDIGTI 707


>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 786

 Score =  814 bits (2103), Expect = 0.0
 Identities = 388/690 (56%), Positives = 510/690 (73%), Gaps = 2/690 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKT +GL+EWLVMPFGLSNAPSTFMR+M +VLKPF+N FVVVYFDDILIYS T+
Sbjct: 97   DEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTK 156

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +HLKHLR VLE L++ +LY+N+KKCSFM   ++FLGFIV   G++ D +K+R I EWP 
Sbjct: 157  EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPA 216

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            P +  +VRSF GLA+FYRRFIRNFS+I +PI++ LKK  F W    + +F+++K  +  A
Sbjct: 217  PTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVKALMTEA 276

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            PVLAL DF KLF V+CDAS  GIGAVLSQ+ +P+E+ S+KL +SR+R++ Y+ EFYA+VR
Sbjct: 277  PVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLEFYALVR 336

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            A++HW+HYL +REF +YSDHQAL+YL +QK ++  HA+W +F+ +FNF LK+KSG  N V
Sbjct: 337  AIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTV 396

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQD--YHVQDGYLF 3866
            ADALSRR  +L+ +  ++ GFE +K  Y  DS F +I   L+     ++  Y + + YLF
Sbjct: 397  ADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHEDYLF 456

Query: 3865 KGNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYI 3686
            KGNQLC+P  SLRE +IRELHG     H GR+ T+ +V+DRY+WP++RRDV ++V+RC  
Sbjct: 457  KGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPA 516

Query: 3685 CQISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIA 3506
            C   KG AQNTGLY+ LP P+  W  LSM+FVLGLP+T +G DSI VVVDRFSKM+HFI 
Sbjct: 517  CLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIP 576

Query: 3505 CRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHS 3326
            C +T +A+ +A LFFREI+RLHG+P +IVSDRD KF  HF   LWR+ G++L +SSTCH 
Sbjct: 577  CFRTSNATHIAELFFREIVRLHGIPTSIVSDRDVKFMGHFWRTLWRKFGTELKYSSTCHP 636

Query: 3325 QTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVP 3146
            QTD  TEV NR+LGNMLRCL    PK WD+ +PQ EF+YN+  N+S +K+PFE  Y   P
Sbjct: 637  QTDGQTEVVNRSLGNMLRCLIQNNPKTWDLVIPQAEFAYNNSVNRSIKKTPFEAAYGLKP 696

Query: 3145 KISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVG 2966
            +  LDL  +P +   S   E  A+ + +IH+EV   L+ +N  Y    ++HRR Q FE G
Sbjct: 697  QHVLDLVPLPQEARVSNEGELFADHIRKIHEEVKAALKASNAEYSFTANQHRRKQEFEEG 756

Query: 2965 DLVMVHLRKNRFPVGTYGKLKHKKHGPVRI 2876
            D V+VHLR+ RFP GTY KLK +K GP ++
Sbjct: 757  DQVLVHLRQERFPKGTYHKLKSRKFGPCKV 786



 Score =  618 bits (1593), Expect = e-173
 Identities = 289/492 (58%), Positives = 380/492 (77%), Gaps = 2/492 (0%)
 Frame = -2

Query: 1472 KRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKI 1293
            K ++R+S SPCA PAL   KKDGSWRMC+DSRAINKITIKY FPIPRL+++LDQL G+++
Sbjct: 19   KGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRV 78

Query: 1292 FSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFL 1113
            FSKIDLK+GYHQIR+R+GDEWKTAFKT +GL+EWLVMPFGLSNAPSTFMR+M +VL PFL
Sbjct: 79   FSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFL 138

Query: 1112 NKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGE 933
            N FVV+YFDDILIYS T+ +HLKHLR +LEVL+  +LY+N+KKCSFM   ++FLGFIV  
Sbjct: 139  NSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSA 198

Query: 932  NGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKGRFTW 753
             G++ D EK++AI EWP P +  +V SF GL +FYRRFIRNFS+I +PIT+ LKK  F W
Sbjct: 199  EGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEW 258

Query: 752  GEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLG 573
                + + +++K  +  APVLALPDF KLF V+C+AS  GIG VLSQ+G+P+E+ SEKL 
Sbjct: 259  SHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLT 318

Query: 572  ESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTF 393
            +SR+R++ Y+ EFYA+VRA++HW+HYL +REF +YSDHQALR+L +QK ++  HA+W +F
Sbjct: 319  DSRRRYSTYDLEFYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSF 378

Query: 392  LQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLK 213
            L +FNF LK+KS   N V +ALSRR  +++ +  ++ GFE +K  Y  DS F +I   L+
Sbjct: 379  LNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQ 438

Query: 212  QG--RPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRY 39
                   L Y + + YLFKGNQLC+P  SLRE +IRELH      H  R+ T+ +V+DRY
Sbjct: 439  GSLQAENLPYRLHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRY 498

Query: 38   FWPQLRRDVGKI 3
            +WP++RRDV ++
Sbjct: 499  YWPKMRRDVERL 510


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  805 bits (2078), Expect = 0.0
 Identities = 390/743 (52%), Positives = 524/743 (70%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN VL+ F+ KFVVVYFDDILIYSKT 
Sbjct: 825  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTL 884

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EH+ H++ VL+ LR+ +LY N++KC+F    ++FLGF+V   GIQVDE KV+ I++WPT
Sbjct: 885  EEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPT 944

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            P+  + V+SF GLA FYRRF+R FSTIAAP+++  KKG  F WGE QE +FQ++K++L  
Sbjct: 945  PENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSE 1004

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
             P+L L DF+K FEV+CDAS  GIG VL Q  +P+ Y S+KLG ++  ++VY+ E YA+V
Sbjct: 1005 GPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALV 1064

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            RAL+ W+HYL  +EF+++SDH+ALKYL  Q  +N  HA+WV FI+ F +++K+K G +N 
Sbjct: 1065 RALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKGKENI 1124

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            VADALSR+  LL +L++++ G E IKE Y  D DF E +     G+  + YH+ DG+LF+
Sbjct: 1125 VADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFLFR 1184

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P  S+R  +++E H G    H G   T D+++D ++WP++RRDV ++V+RC  C
Sbjct: 1185 ANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTC 1244

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
              +K +    GLY  LP+P   WED+SM+FVLGLPRT+RG+DSI VVVDRFSKM+HFI C
Sbjct: 1245 HKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPC 1304

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             K+DDAS +A LFF EI+RLHGMPKTIVSDRDTKF S+F   LW +LG++L FS+TCH Q
Sbjct: 1305 HKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQ 1364

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  +LR L  +  K+W+  LP +EF+YN   + +T   PFEVVY   P 
Sbjct: 1365 TDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPL 1424

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P      + A   A  V +IH++  E +++ ++ Y A  +K+R+   FE GD
Sbjct: 1425 SPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGD 1484

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV VHLRK+RFP     KL  +  GP R+  KINDNAY +E+P D  +S+TFNV D+  +
Sbjct: 1485 LVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPF 1544

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
            F    L     SRS+ F  GE D
Sbjct: 1545 F---GLEDSESSRSTPFQEGEDD 1564



 Score =  687 bits (1772), Expect = 0.0
 Identities = 350/814 (42%), Positives = 507/814 (62%), Gaps = 51/814 (6%)
 Frame = -2

Query: 2291 DKKEDRLMEKQ------GKIFIVHRSYLIDNTDGD--QRKKLFRIPGVVNGKLCRIIIDS 2136
            D +E+  +EK       G   +V +   +  +D +  QR  LF+    V  K+ ++IID 
Sbjct: 425  DSEEENNLEKDICEFESGAALVVTQILSVQMSDAENGQRHNLFQTRAKVQDKVVKVIIDG 484

Query: 2135 GSEENLITRGLSKTLGLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXX 1956
            GS  NL ++ + + LGL+  +HP+PY V W+   G + + +  KVP  IG+ Y       
Sbjct: 485  GSCHNLASKEMVEKLGLKLLKHPHPYHVQWLNNSGSIKIAQRVKVPFKIGE-YIDTMECD 543

Query: 1955 XXXXDYSDLIFGRPWLYDTDVIHRGRSNSYEFMWGKTKIILIPGK---------RKSPE- 1806
                    ++ GRPW YD   +H GR+N Y   W   ++IL P           +KS E 
Sbjct: 544  VAPMTVCHMLLGRPWQYDRSSLHCGRTNQYTIKWKGKELILKPMTPQQILAEHLQKSSEV 603

Query: 1805 -----------------------------ENVNMETRNMFHTVTGRELQEHIGEVDEGIA 1713
                                         +N   E  N+    T  E+++     ++ + 
Sbjct: 604  RNESAKEGQKNNLSAPHKSVSESHKPNMRDNKKREGENLVMIATKSEMRDVRRNPEQVLF 663

Query: 1712 LIV-KGKAEENSELTH--ERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPN 1542
            ++V K      ++LT     V  +L E+ D+ P E P G+PPL+ I+H IDL+PGA+LPN
Sbjct: 664  ILVCKDTLLSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPN 723

Query: 1541 LAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKI 1362
               YR +P              +K  +R+S+SPCAVP + + KKDGSWRMC+D RAIN I
Sbjct: 724  RPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNI 783

Query: 1361 TIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVM 1182
            T++Y  PIPRL+D+LD+L+G+ IFSKIDL++G+HQIR++ GDEWKTAFKTK GLYEWLVM
Sbjct: 784  TVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVM 843

Query: 1181 PFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKL 1002
            PFGL+NAPSTFMR+MN VL  F+ KFVV+YFDDILIYSKT  EH+ H++ +L+VLR  +L
Sbjct: 844  PFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAHIQQVLDVLRKEQL 903

Query: 1001 YMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRR 822
            Y N++KC+F    ++FLGF+V   G+QVDE KV+AI +WPTP+  + V SF GL  FYRR
Sbjct: 904  YANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRR 963

Query: 821  FIRNFSTIAAPITDCLKKG-RFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEA 645
            F+R FSTIAAP+ +  KKG  F WGE QE + Q++K++L   P+L LPDF+K FEV+C+A
Sbjct: 964  FVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDA 1023

Query: 644  SMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYS 465
            S  GIG VL Q G+PV Y SEKLG ++  ++VY+ E YA+VRAL+ W+HYL  +EF+++S
Sbjct: 1024 SGIGIGGVLMQNGQPVAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHS 1083

Query: 464  DHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIEL 285
            DH+AL++L  Q  +N  HA+WV F++ F +++K+K   +N V +ALSR+  L+  L++++
Sbjct: 1084 DHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKV 1143

Query: 284  VGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPRISLREAVIREL 105
             G E +KE Y  D DF E +     G+    YHI DG+LF+ N+LC+P  S+R  +++E 
Sbjct: 1144 TGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQET 1203

Query: 104  HSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
            H+G    H     T  +++D ++WP++RRDV ++
Sbjct: 1204 HAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRL 1237


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  803 bits (2075), Expect = 0.0
 Identities = 389/743 (52%), Positives = 524/743 (70%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL+PF+ KFVVVYFDDILIYSK+ 
Sbjct: 822  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSM 881

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EH  HLR+V  ALR+ +L+ N++KC+F    + FLG++V   GI+VD+ KV  I+ WPT
Sbjct: 882  GEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPT 941

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PKT + VRSFLGLA FYRRF+++FSTIAAP++   KKG  F+WG  QE++F  +K+KL  
Sbjct: 942  PKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTH 1001

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L DF+K FE++CDAS  G+G VL QE KP+ Y S+KL      ++ Y+ E YA+V
Sbjct: 1002 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALV 1061

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G +N 
Sbjct: 1062 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1121

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +ADALSRR TLLT+L  ++ G E IK+ Y  D+DF ++    K GR    + + DG++F+
Sbjct: 1122 IADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFR 1181

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G + T D+++  +FWPQ+RRDVG+ V RC  C
Sbjct: 1182 ANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATC 1241

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLYM LP+P   WED+SM+FVLGLPRT+RG+DSI VVVDRFSKM+HFI C
Sbjct: 1242 QKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPC 1301

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             KTDDAS +A LFFREI+RLHG+P TIVSDRDTKF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1302 HKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQ 1361

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  MLR +  +  K W+  LP +EF+YN   + +T+  PF++VY  +P+
Sbjct: 1362 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPR 1421

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P     +  A+  AE + ++H+   E+++R N  YK   DK RR   FE GD
Sbjct: 1422 APIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGD 1481

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK RFP     KL  +  GP ++  KIN+NAY +++P+D  +S TFNV D+  Y
Sbjct: 1482 LVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPY 1541

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++    GE D
Sbjct: 1542 LGE---EDELESRTTQMQEGEDD 1561



 Score =  690 bits (1781), Expect = 0.0
 Identities = 341/767 (44%), Positives = 488/767 (63%), Gaps = 27/767 (3%)
 Frame = -2

Query: 2225 IDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGW 2046
            ++  + +QR  LF+   VV  + CR+IID GS  NL +  + + L L  + HP+PY + W
Sbjct: 468  MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQW 527

Query: 2045 IKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSY 1866
            +   G   VTK   +  +IG  Y              +++ GRPW +D D +H GRSN Y
Sbjct: 528  LNNSGKAKVTKLVHINFAIGN-YHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQY 586

Query: 1865 EFMWGKTKIIL--------------------IPGKRKSPEENVNMETRNMFHT---VTGR 1755
             F++   KI+L                        +K+  +    ET N+       T  
Sbjct: 587  SFLYHDKKIVLHSMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPKCLLATKS 646

Query: 1754 ELQEHIGEVDEGIALIVKGKAEENSELTHE---RVRPLLDEFHDLGPAELPSGVPPLQDI 1584
            ++ E I       AL+ K       ++ H     V  +L E+ D+ P E+P G+PP++ I
Sbjct: 647  DINELIASPSVAYALVCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGI 706

Query: 1583 QHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDG 1404
            +H IDL+PGASLPN A YR +P              +K  +R+S+SPCAVP + + KKDG
Sbjct: 707  EHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDG 766

Query: 1403 SWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKT 1224
            SWRMC+D RAIN ITI+Y  PIPRL+D+LD+L+G+ +FSK+DL++GYHQIR++ GDEWKT
Sbjct: 767  SWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKT 826

Query: 1223 AFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLK 1044
            AFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL PF+ KFVV+YFDDILIYSK+  EH  
Sbjct: 827  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 886

Query: 1043 HLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPT 864
            HLR++   LR  +L+ N++KC+F    + FLG++V   G++VD+ KV+AI  WPTPKT +
Sbjct: 887  HLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVS 946

Query: 863  DVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGEYQESSVQQIKEKLCTAPVLA 687
             V SFLGL  FYRRF+++FSTIAAP+    KKG  FTWG  QE++   +K+KL  AP+L 
Sbjct: 947  QVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQ 1006

Query: 686  LPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKH 507
            LPDF+K FE++C+AS  G+G VL QEGKPV Y SEKL      ++ Y+ E YA+VR L+ 
Sbjct: 1007 LPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLET 1066

Query: 506  WEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNAL 327
            W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F++ F +++KHK   +N + +AL
Sbjct: 1067 WQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADAL 1126

Query: 326  SRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLC 147
            SRR TL+T L  ++ G E +K+ Y  D+DF ++    K GR    + I DG++F+ N+LC
Sbjct: 1127 SRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLC 1186

Query: 146  LPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGK 6
            +P  S+R  +++E H G    H   + T  +++  +FWPQ+RRDVG+
Sbjct: 1187 IPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGR 1233



 Score =  478 bits (1230), Expect = e-131
 Identities = 275/736 (37%), Positives = 412/736 (55%), Gaps = 34/736 (4%)
 Frame = -3

Query: 4906 GLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTETEHLKHLRSVL 4727
            GLYE+ VM FGL+NAP+ FM +MN+V   +++KFVVV+ DDIL+YS++E +H  HLR VL
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684

Query: 4726 EALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPTPKTPTDVRSFL 4547
              LRE++LY  + KC F +  + FLG ++   G+ VD + V  + +W  PKT T +RSFL
Sbjct: 1685 GKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFL 1744

Query: 4546 GLATFYRRFIRNFSTIAAPISDCLKK-GRFSWGEEQEDSFQQIKEKLCTAPVLALRDFSK 4370
            GLA +YRRFI NFS IA P++  LKK  +F W  + E +FQ +KEKL ++PVL L D  K
Sbjct: 1745 GLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRK 1804

Query: 4369 LFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVRALKHWEHYLL 4190
             F V CDAS +G+G VL QE   + Y S +L      +  ++ E  AVV ALK W HYL+
Sbjct: 1805 DFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLI 1864

Query: 4189 HREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKVADALSRRATL 4010
                 +Y+DH++LKY+ TQ  +N    RW+  I+ ++  + +  G  N VADALSR++  
Sbjct: 1865 GNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHC 1924

Query: 4009 LT-----------------ELKIELVGF-----------EIIKECYEGDSDFGEIWETLK 3914
             T                  L I   GF           + I+E  + D D   + + +K
Sbjct: 1925 NTLGVRGIPPELNQQMEALNLSIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMK 1984

Query: 3913 QGRPRQDYHVQDGYLFKGNQLCLPRT-SLREAVIRELHGGSFSAHLGREATIDLVSDRYF 3737
            QG+       + G L+  N++C+P    L++ +++E H   +S H G       + ++Y+
Sbjct: 1985 QGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYW 2044

Query: 3736 WPQLRRDVGKIVERCYICQISKGRAQN-TGLYMLLPIPENIWEDLSMEFVLGLPRTQRGK 3560
            W  ++R++ + V  C +CQ  K   Q   GL   L +PE  W+++ M+F+ GLP+TQ G 
Sbjct: 2045 WVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGY 2104

Query: 3559 DSIMVVVDRFSKMSHFIACRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMG 3380
            DSI VVVDR +K++ FI  + T   + +A L+F  I+ LHG+PK IVSDR+++FTSHF  
Sbjct: 2105 DSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWK 2164

Query: 3379 FLWRRLGSKLNFSSTCHSQTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSM 3200
             L   LG++LNFS+  H QTD  TE  N+ L +ML     +  K WD SLP  EFSYN+ 
Sbjct: 2165 KLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNS 2224

Query: 3199 KNKSTRKSPFEVVYTQVPKISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANE 3020
               S + +P+E +Y +  +  L    +    +  V    +        + + ++L+ A  
Sbjct: 2225 YQASIQMAPYEALYGRKCRTPLLWDQV---GESQVFGTDILREAEAKVRTIWDNLKVAQS 2281

Query: 3019 AYKARVDKHRRVQIFEVGDLVMVHLRKNR--FPVGTYGKLKHKKHGPVRISWKINDNAYV 2846
              K+  D  RR   F V D V + +   R      T GKL  +  GP RI  +  + AY 
Sbjct: 2282 RQKSYADNRRRNLEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEVAYQ 2341

Query: 2845 VEIPSDM-NISNTFNV 2801
            +E+P+ + N+ + F+V
Sbjct: 2342 LELPASLGNVHDVFHV 2357



 Score =  290 bits (741), Expect = 1e-74
 Identities = 161/454 (35%), Positives = 251/454 (55%), Gaps = 32/454 (7%)
 Frame = -2

Query: 1271 NGYHQIRIREGDEWKT--AFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVV 1098
            + +H+     GD+  T  +     GLYE+ VM FGL+NAP+ FM +MN+V   +L+KFVV
Sbjct: 1601 DAHHKFAATIGDDRATNPSGFASYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVV 1660

Query: 1097 IYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQV 918
            ++ DDIL+YS++E +H  HLR +L  LR ++LY  + KC F +  + FLG ++   GV V
Sbjct: 1661 VFIDDILVYSQSEEDHQHHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAV 1720

Query: 917  DEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKK-GRFTWGEYQ 741
            D E V A+ +W  PKT T + SFLGL  +YRRFI NFS IA P+T  LKK  +F W    
Sbjct: 1721 DPETVTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQC 1780

Query: 740  ESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQ 561
            E + Q +KEKL ++PVL LPD  K F V C+AS +G+G VL QEG  V Y S +L     
Sbjct: 1781 EKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEG 1840

Query: 560  RWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKF 381
             +  ++ E  AVV ALK W HYL+     +Y+DH++L+++ TQ  +N    RW+  ++ +
Sbjct: 1841 NYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDY 1900

Query: 380  NFILKHKSDSQNKVVNALSRRATLVT-----------------*LKIELVGF-------- 276
            +  + +     N V +ALSR++   T                  L I   GF        
Sbjct: 1901 DVGIHYHPGKANVVADALSRKSHCNTLGVRGIPPELNQQMEALNLSIVSRGFLATLEAKP 1960

Query: 275  ---EVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLCLPRI-SLREAVIRE 108
               + ++E  + D D   + + +KQG+         G L+  N++C+P +  L++ +++E
Sbjct: 1961 TLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQE 2020

Query: 107  LHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGK 6
             H   +S H         + ++Y+W  ++R++ +
Sbjct: 2021 AHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAE 2054


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  795 bits (2054), Expect = 0.0
 Identities = 382/746 (51%), Positives = 525/746 (70%), Gaps = 2/746 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGLSNAPSTFMR+M +VL+P + KF VVYFDDIL+YSKT+
Sbjct: 720  DEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTK 779

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHLKHL  V + LRE KLY  ++KC+FM++ + FLG+++   GI VD++ +  ++ WPT
Sbjct: 780  GEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPT 839

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            P T T+VRSF GLA+FYRRFI+NFST+ API++C++KG F W E+ + SF++IK+ +C  
Sbjct: 840  PTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQSFEKIKQLMCNT 899

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            P+L L DF +LFEV+CDAS  GIGAVL Q  KP+ Y S+KL  ++ +++ Y+ EFYA++R
Sbjct: 900  PILKLPDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYSTYDKEFYAIIR 959

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            AL HW HYL  + F+L+SDH+ALKY++ Q  +N  HA+WV F+Q F F  K+K G +N V
Sbjct: 960  ALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFSSKYKEGKKNVV 1019

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQ--DYHVQDGYLF 3866
            ADALSRR +LL+ +   ++GFE +KE Y+ D DF E W T  +G   Q   Y +Q+G+LF
Sbjct: 1020 ADALSRRHSLLSVMSNRVLGFEFMKELYKEDPDFSEEWITQTEGHKNQGSKYLLQEGFLF 1079

Query: 3865 KGNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYI 3686
            +GN+LC+PR S R+ +IRE+H G    H G + T++++ D+++WP++  DV  I+ RC  
Sbjct: 1080 QGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRMMGDVQIILRRCSK 1139

Query: 3685 CQISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIA 3506
            CQ+SK   Q  G Y  LP+P   WEDLSM+F++ LPRTQRGKDS+MVVVDRFSKM+HF+A
Sbjct: 1140 CQLSKSSFQ-PGPYTPLPVPSKPWEDLSMDFIVALPRTQRGKDSVMVVVDRFSKMAHFVA 1198

Query: 3505 CRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHS 3326
            C+KT+DA  VA LF +EI+RLHG+PKTIVSDRDTKF  +F   LW+ L +KL FS++ H 
Sbjct: 1199 CKKTEDAVSVAELFLKEIVRLHGVPKTIVSDRDTKFMGYFWKTLWKLLKTKLLFSTSHHP 1258

Query: 3325 QTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVP 3146
            QTD  TEVTNRTLG +LRCL ++  K WD+ L   EF++N   + +T  SPFEVVY   P
Sbjct: 1259 QTDGQTEVTNRTLGRILRCLVSKSLKDWDLKLAAAEFAFNRAPSTATGHSPFEVVYGVNP 1318

Query: 3145 KISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVG 2966
             + LDL+S+P + + ++ A   AE++ ++H+ V   ++R NE Y+  +   +  + FE G
Sbjct: 1319 LMPLDLSSVPKE-NINLDAMKRAEQLLKLHETVKRQIERTNEQYQKHLKVPKGKKEFEPG 1377

Query: 2965 DLVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYR 2786
            DLV +HLRK RFP     KL  +  GP  +  KI  +AY +++P D  +  TFNV D+  
Sbjct: 1378 DLVWIHLRKERFPAKRKNKLMPRSDGPFEVVEKIGPSAYKIDLPGDYGVHGTFNVGDLSP 1437

Query: 2785 YFPEGPLYTEAGSRSSLFAVGEPDTG 2708
            Y+ +       G R+S    G  D G
Sbjct: 1438 YYEDSGDEEVTGLRTSPVQPGGVDAG 1463



 Score =  729 bits (1881), Expect = 0.0
 Identities = 353/740 (47%), Positives = 488/740 (65%), Gaps = 6/740 (0%)
 Frame = -2

Query: 2213 DGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGWIKGG 2034
            + DQR  +FR    V G++C +II+ GS  N+ +  +   LGL  +EHPNPYK+ W+   
Sbjct: 392  EADQRSMIFRSRCTVQGRVCNLIINGGSCTNVASTTMVSKLGLPTQEHPNPYKLRWLSKD 451

Query: 2033 GDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYS-DLIFGRPWLYDTDVIHRGRSNSYEFM 1857
              + V K C +  SIGK Y             +  L+ GRPW YD +  H+G+ N Y F 
Sbjct: 452  SGVRVDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDNVYIFK 511

Query: 1856 WGKTKIILIP---GKRKSPEENVNMETRNMFHTVTGRELQEHIGEVDEGIALIVKGKAEE 1686
                K+ L P    +R     NV  E   +        ++E I +    + L+ +   +E
Sbjct: 512  HQGKKVTLTPLPPNQRDYGSPNVPEEMSGVLFLSEAAMIKE-IRQAQPVLMLLSREVNQE 570

Query: 1685 NSELTHERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXX 1506
             + +    V PL+  F ++ P ELPSG+PPL+ I+HHIDLVPG+ LPN   YR  P    
Sbjct: 571  ENTVVPTAVAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSVLPNKPAYRCDPNATK 630

Query: 1505 XXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLE 1326
                       K  +R+S+SPCAVPAL + KKDG+WRMC DSRAIN IT+KY FPIPRL+
Sbjct: 631  ELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINNITVKYRFPIPRLD 690

Query: 1325 DLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFM 1146
            D+LD+L+GA IFSKIDL+ GYHQ+RIREGDEWKTAFKTK GLYEWLVMPFGLSNAPSTFM
Sbjct: 691  DMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFM 750

Query: 1145 RMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMK 966
            R+M +VL P L KF V+YFDDIL+YSKT+ EHLKHL  + ++LR  KLY  ++KC+FM++
Sbjct: 751  RLMTEVLRPCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFKILREQKLYGKLEKCTFMVE 810

Query: 965  SILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPI 786
             + FLG+++   G+ VD+E + A+  WPTP T T+V SF GL +FYRRFI+NFST+ API
Sbjct: 811  EVAFLGYLISGRGISVDQENIAAMQSWPTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPI 870

Query: 785  TDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEG 606
            T+C++KG F W E  + S ++IK+ +C  P+L LPDF +LFEV+C+AS  GIG VL Q  
Sbjct: 871  TECMRKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFEVECDASGVGIGAVLIQSQ 930

Query: 605  KPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKT 426
            KPV Y SEKL  ++ +++ Y+ EFYA++RAL HW HYL  + F+L+SDH+AL++++ Q  
Sbjct: 931  KPVAYFSEKLNGAKLKYSTYDKEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHK 990

Query: 425  VNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGD 246
            +N  HA+WV FLQ F F  K+K   +N V +ALSRR +L++ +   ++GFE +KE Y+ D
Sbjct: 991  LNFRHAKWVEFLQSFTFSSKYKEGKKNVVADALSRRHSLLSVMSNRVLGFEFMKELYKED 1050

Query: 245  SDFGEIWETLKQGRPT--LDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLAR 72
             DF E W T  +G       Y + +G+LF+GN+LC+PR S R+ +IRE+HSG    H   
Sbjct: 1051 PDFSEEWITQTEGHKNQGSKYLLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHFGV 1110

Query: 71   ETTIGLVSDRYFWPQLRRDV 12
            + T+ ++ D+++WP++  DV
Sbjct: 1111 QKTLEILQDQFYWPRMMGDV 1130


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  795 bits (2052), Expect = 0.0
 Identities = 388/747 (51%), Positives = 526/747 (70%), Gaps = 2/747 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGLSNAPSTFMR+M +VL+P++ +FVVVYFDDIL+YS ++
Sbjct: 708  DEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPYLGRFVVVYFDDILVYSPSK 767

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHLKHL+ + E LRE+KLY  ++KCSFM   + FLGFI+ + GI VD++KV+ I+ WP 
Sbjct: 768  EEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIKSWPI 827

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            PK  TDVRSF GLA+FYRRFI++FST+ API++C+KKG F WG++ E SF  IKEKLC +
Sbjct: 828  PKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGEFKWGDKAESSFNIIKEKLCES 887

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            P+L L +F+KLFEV+CDAS  GIGAVL QE KP+ Y S+KL  ++  ++ Y+ EFYA+VR
Sbjct: 888  PILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVR 947

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            AL HW HYL  R F+L+SDH+ALKY++ Q  +N  HA+WV F+Q FNF  K+  G  N V
Sbjct: 948  ALNHWSHYLKPRPFVLHSDHEALKYINGQHKLNHRHAKWVEFLQSFNFSSKYIEGKDNIV 1007

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQG--RPRQDYHVQDGYLF 3866
            ADALSRR  +L+ ++  ++GFE +KE Y  D DF   WE L+ G  + +  Y VQ+G+LF
Sbjct: 1008 ADALSRRFIMLSFMEQRVLGFEYMKELYVEDPDFKGEWELLQSGQIKLKSKYLVQNGFLF 1067

Query: 3865 KGNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYI 3686
             GN+LC+PR   R  +IRE+H    + H G + T D++ ++++WP++  DV  +++RC  
Sbjct: 1068 FGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQKTYDILQEQFYWPKMLGDVQDVIKRCAP 1127

Query: 3685 CQISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIA 3506
            CQ SK   Q TG Y  LP+P   WED+SM+F++ LPRTQRGKDSIMVVVDRFSKM+HFIA
Sbjct: 1128 CQQSKSYFQ-TGPYTPLPVPNQPWEDISMDFIVALPRTQRGKDSIMVVVDRFSKMAHFIA 1186

Query: 3505 CRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHS 3326
            C+KT+DA+ VA L+F+E+++LHG+PK+IVSDRD+KF SHF   LW+ L ++L FS++ H 
Sbjct: 1187 CKKTEDATSVAELYFKEVVKLHGIPKSIVSDRDSKFMSHFWRTLWKLLKTRLLFSTSHHP 1246

Query: 3325 QTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVP 3146
            QTD  TEVTN+TLG +LRC  A   K WD+ L Q EF++N   + +T KSPFEVVY   P
Sbjct: 1247 QTDGQTEVTNKTLGRILRCTVARSLKDWDLKLAQAEFAFNRAPSTTTGKSPFEVVYGVNP 1306

Query: 3145 KISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVG 2966
             +  DLA I  +      A+   E++  IH++V + +++ANEA+K +    +  + FE G
Sbjct: 1307 MMPTDLAPIKRN-TIDYDAKKRVEQMLHIHEQVKKQIEKANEAHKGKSKGVKGTKSFEPG 1365

Query: 2965 DLVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYR 2786
            DLV +HLRK RFP     KL  +  GP  +  K   NAY + +P +  +  TFNV D+  
Sbjct: 1366 DLVWIHLRKERFPEKRKNKLMPRADGPFEVLEKFGSNAYKINLPGEYGVHGTFNVGDLSP 1425

Query: 2785 YFPEGPLYTEAGSRSSLFAVGEPDTGR 2705
            Y+ E         R++ F  GE +T +
Sbjct: 1426 YYEEIEEDKLEDLRANPFQEGEIETNQ 1452



 Score =  741 bits (1913), Expect = 0.0
 Identities = 362/736 (49%), Positives = 494/736 (67%), Gaps = 4/736 (0%)
 Frame = -2

Query: 2207 DQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGWIKGGGD 2028
            DQR+++FR    + G++C +IID GS  N+ +  L + L L  ++HP+PYK+ W+  G +
Sbjct: 383  DQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLPTQDHPSPYKLRWLNKGAE 442

Query: 2027 MWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSYEFMWGK 1848
            + V K C V  SIGK Y           D   L+ GRPW +D D +H GR N+Y F +  
Sbjct: 443  VRVDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYTFKFRS 502

Query: 1847 TKIIL--IPGKRKSPEENVNMETRNMFHTVTGRELQEHIGEVDEGIALIVKGKAEENSEL 1674
             K+IL  +P   K       +E       +   E+ + +   ++  ALI K      +  
Sbjct: 503  RKVILTPLPPVLKHTTPPSMLEPSKEVLLINEAEMLQELKGDEDVYALIAKDVVFGQNVS 562

Query: 1673 THERVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXX 1494
              + V+ LL  + D+ P ELPSG+PPL+ I+H ID +PGA+LPN A YR  P        
Sbjct: 563  LPKEVQELLQSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDPKATQELQQ 622

Query: 1493 XXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLD 1314
                   K  +R+S+SPC+VPAL + KKDGSWRMC DSRAIN ITIKY FPIPRL+D+LD
Sbjct: 623  QIGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILD 682

Query: 1313 QLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMN 1134
            +L+GA++FSKIDL+ GYHQ+RI+EGDEWKTAFKTK GLYEWLVMPFGLSNAPSTFMR+M 
Sbjct: 683  ELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMT 742

Query: 1133 QVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILF 954
            +VL P+L +FVV+YFDDIL+YS ++ EHLKHL+ + E LR +KLY  ++KCSFM   + F
Sbjct: 743  EVLRPYLGRFVVVYFDDILVYSPSKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQF 802

Query: 953  LGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCL 774
            LGFI+ + G+ VD+EKV+AI  WP PK  TDV SF GL +FYRRFI++FST+ APIT+C+
Sbjct: 803  LGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECM 862

Query: 773  KKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVE 594
            KKG F WG+  ESS   IKEKLC +P+L LP+F+KLFEV+C+AS  GIG VL QE KP+ 
Sbjct: 863  KKGEFKWGDKAESSFNIIKEKLCESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIA 922

Query: 593  YMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPM 414
            Y SEKL  ++  ++ Y+ EFYA+VRAL HW HYL  R F+L+SDH+AL++++ Q  +N  
Sbjct: 923  YFSEKLSGAKLNYSTYDKEFYAIVRALNHWSHYLKPRPFVLHSDHEALKYINGQHKLNHR 982

Query: 413  HARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFG 234
            HA+WV FLQ FNF  K+     N V +ALSRR  +++ ++  ++GFE +KE Y  D DF 
Sbjct: 983  HAKWVEFLQSFNFSSKYIEGKDNIVADALSRRFIMLSFMEQRVLGFEYMKELYVEDPDFK 1042

Query: 233  EIWETLKQGRPTL--DYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTI 60
              WE L+ G+  L   Y + +G+LF GN+LC+PR   R  +IRE+HS   + H   + T 
Sbjct: 1043 GEWELLQSGQIKLKSKYLVQNGFLFFGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQKTY 1102

Query: 59   GLVSDRYFWPQLRRDV 12
             ++ ++++WP++  DV
Sbjct: 1103 DILQEQFYWPKMLGDV 1118


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  789 bits (2038), Expect = 0.0
 Identities = 376/721 (52%), Positives = 511/721 (70%), Gaps = 2/721 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKT+FKTK+GLYEWLVMPFGL+NAPSTFMR+M QVLKPF+ +FVVVYFDDILIYS++ 
Sbjct: 727  DEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSC 786

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +H +HL+ V+  LR  K Y+N+KKC+FM  S++FLGF+V   G++ D +K++ I +WP 
Sbjct: 787  EDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPV 846

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKGRFSWGEEQEDSFQQIKEKLCTA 4400
            P    +VRSF G+ATFYRRFIRNFS+I API++C+K G F W +    +F++IK K+   
Sbjct: 847  PTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMVNP 906

Query: 4399 PVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVVR 4220
            P+L L DF K+FEV CDAS  GIGAVLSQE  P+ + S+KL  ++++++ Y+ EFYAVV+
Sbjct: 907  PILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQ 966

Query: 4219 ALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNKV 4040
            A++HW+HYL ++EF+LYSDH+AL+YL++QK +N  HA+W +F+Q F F LKH +G +NKV
Sbjct: 967  AIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKV 1026

Query: 4039 ADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQ--DYHVQDGYLF 3866
            ADALSR+A LL  +    +GFE +K CY+ D+DFG+++ +L  G      D+ + +GYLF
Sbjct: 1027 ADALSRKALLLVNMSTTTIGFEELKHCYDNDADFGDVYSSLLSGSKATCIDFQILEGYLF 1086

Query: 3865 KGNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYI 3686
              N+LCLPRTSLR+ VI ELHGG    H GR+ TI LV DR+FWP L++DV K++++C  
Sbjct: 1087 YKNRLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRA 1146

Query: 3685 CQISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIA 3506
            CQ+ KG  QNTGLY  LP+P   WEDLSM+FVLGLPRTQRG DSI VVVDRFSKM+HFI 
Sbjct: 1147 CQVGKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIP 1206

Query: 3505 CRKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHS 3326
            C+K  DAS VA LFF+E++RLHG+P++IVSDRD                           
Sbjct: 1207 CKKASDASYVAALFFKEVVRLHGLPQSIVSDRD--------------------------- 1239

Query: 3325 QTDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVP 3146
                  +++NR+LGN+LRC+  ++ ++WD  LPQ EF++NS  N++T  SPFEV Y   P
Sbjct: 1240 ------KLSNRSLGNLLRCIVRDQLRKWDNXLPQAEFAFNSSTNRTTGYSPFEVAYGLKP 1293

Query: 3145 KISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVG 2966
            K  +DL  +P     S   +  A  +  IH++V E ++ +NE YK   D HRR   F+ G
Sbjct: 1294 KQPVDLIPLPTSVRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAADAHRRYIQFQEG 1353

Query: 2965 DLVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYR 2786
            DLVMV LR  RF   TY KL+ KK GP R+  ++ +NAY++E+PS+++ S  FNV D++ 
Sbjct: 1354 DLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLLELPSNLHFSPIFNVEDLHI 1413

Query: 2785 Y 2783
            Y
Sbjct: 1414 Y 1414



 Score =  754 bits (1948), Expect = 0.0
 Identities = 376/761 (49%), Positives = 507/761 (66%), Gaps = 8/761 (1%)
 Frame = -2

Query: 2261 QGKIFIVHRSYLIDNTDGDQ---RKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTL 2091
            +G   +V     I    G++   R  +F+     +G+LC +IID GS  N+ ++ L + L
Sbjct: 383  EGHSLVVRPLLTIPKVKGEEDWRRISIFQTRISCHGRLCTMIIDGGSSLNIASQELVEKL 442

Query: 2090 GLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPW 1911
             L+ E HPNP++V W+     + V+  C V    GK +             S ++ GRPW
Sbjct: 443  NLKTERHPNPFRVAWVNDTS-IPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPW 501

Query: 1910 LYDTDVIHRGRSNSYEFMWGKTKIILIPGKRKSPEENVNMETRNMFHTVTGRELQEHIGE 1731
            L+D  V H G  N+Y  +    K IL P K   P +  N E       +T  + +    E
Sbjct: 502  LFDRKVQHDGYENTYALIHNGRKKILRPMKEVPPIKKSN-ENAQPKKVLTMCQFENESKE 560

Query: 1730 VDEGIALIVKGKAEENSELTHE---RVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVP 1560
                 AL+ + K EE  E   E     R +LD+F DL P ELP+ +PP++DIQH IDL+P
Sbjct: 561  TXVIFALMAR-KVEEFKEQDKEYPANARKILDDFSDLWPVELPNELPPMRDIQHAIDLIP 619

Query: 1559 GASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDS 1380
            GASLPNL  YRM+P               K  IR+S+SPC VPAL   KKDGSWRMC+DS
Sbjct: 620  GASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDS 679

Query: 1379 RAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGL 1200
            RAINKITIKY FPIPRL+D+LD + G+ IFSKIDL++GYHQIRIR GDEWKT+FKTK+GL
Sbjct: 680  RAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGL 739

Query: 1199 YEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEV 1020
            YEWLVMPFGL+NAPSTFMR+M QVL PF+ +FVV+YFDDILIYS++  +H +HL+ ++  
Sbjct: 740  YEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMRT 799

Query: 1019 LRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGL 840
            LRA K Y+N+KKC+FM  S++FLGF+V   GV+ D EK++AI +WP P    +V SF G+
Sbjct: 800  LRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHGM 859

Query: 839  ETFYRRFIRNFSTIAAPITDCLKKGRFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFE 660
             TFYRRFIRNFS+I APIT+C+K G F W +    + ++IK K+   P+L LPDF K+FE
Sbjct: 860  ATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFE 919

Query: 659  VDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHRE 480
            V C+AS  GIG VLSQEG PV + SEKL  ++++++ Y+ EFYAVV+A++HW+HYL ++E
Sbjct: 920  VACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQHYLSYKE 979

Query: 479  FILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT* 300
            F+LYSDH+ALR+L++QK +N  HA+W +FLQ F F LKH +  +NKV +ALSR+A L+  
Sbjct: 980  FVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAGIENKVADALSRKALLLVN 1039

Query: 299  LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPT--LDYHI*DGYLFKGNQLCLPRISLR 126
            +    +GFE +K CY+ D+DFG+++ +L  G     +D+ I +GYLF  N+LCLPR SLR
Sbjct: 1040 MSTTTIGFEELKHCYDNDADFGDVYSSLLSGSKATCIDFQILEGYLFYKNRLCLPRTSLR 1099

Query: 125  EAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
            + VI ELH G    H  R+ TI LV DR+FWP L++DV K+
Sbjct: 1100 DHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKV 1140


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  788 bits (2034), Expect = 0.0
 Identities = 384/743 (51%), Positives = 519/743 (69%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL+PF+ KFVVVYFDDILIYSK+ 
Sbjct: 801  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSM 860

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EH  HLR+V  ALR+ +L+ N++KC+F    + FLG++V   GI+VD+ KV  I+ WPT
Sbjct: 861  GEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPT 920

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PKT + VRSFLGLA FY RF+++FSTIAAP++   KKG  F+WG  QE++F  +K KL  
Sbjct: 921  PKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKHKLTH 980

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L DF+K FE++CDAS  G+G VL QE K + Y S+KL      ++ Y+ E YA+V
Sbjct: 981  APLLQLPDFNKTFELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALV 1040

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G +N 
Sbjct: 1041 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1100

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +A+ALSRR TLLT+L  ++ G E IK+ Y  D+DF ++    K GR    + + DG++F+
Sbjct: 1101 IANALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFR 1160

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G + T D+++  +FWPQ+RRDVG+ V RC  C
Sbjct: 1161 ANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATC 1220

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLYM LP+P   WED+SM+FVLGLPRT+RG+DSI VVVDRFSKM HFI C
Sbjct: 1221 QKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPC 1280

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             KTDDAS +A LFFREI+RLHG+P TIVSDRDTKF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1281 HKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQ 1340

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD   EV NRTL  MLR +  +  K W+  LP +EF+ N   + +T+  PF++VY+ +P+
Sbjct: 1341 TDGQIEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFACNRSLHSTTKMCPFQIVYSLLPR 1400

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P     +  A+  AE + ++H+   E+++R N  YK   DK RR   FE GD
Sbjct: 1401 APIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELNFEPGD 1460

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK RFP     KL  +  GP ++  KIN+NAY +++P+D  +S TFNV D+  Y
Sbjct: 1461 LVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPY 1520

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++    GE D
Sbjct: 1521 LGE---EDELESRTTQMQEGEDD 1540



 Score =  681 bits (1756), Expect = 0.0
 Identities = 338/767 (44%), Positives = 484/767 (63%), Gaps = 27/767 (3%)
 Frame = -2

Query: 2225 IDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGW 2046
            ++  + +QR  LF+   VV  + CR+IID GS  NL +  + + L L  + HP+ Y + W
Sbjct: 447  MEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHSYYIQW 506

Query: 2045 IKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSY 1866
            +   G   VTK   +  +IG  Y              +++ GRPW +D D +H GRSN Y
Sbjct: 507  LNNSGKAKVTKLVHINFAIGN-YHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQY 565

Query: 1865 EFMWGKTKIILIP--------------------GKRKSPEENVNMETRNMFHT---VTGR 1755
             F++   KI+L P                      +K+  +    ET N+       T  
Sbjct: 566  SFLYHDKKIVLHPMSPEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPKCLLATKS 625

Query: 1754 ELQEHIGEVDEGIALIVKGKAEENSELTHE---RVRPLLDEFHDLGPAELPSGVPPLQDI 1584
            ++ E I       AL+ K       ++ H     V  +L E+ D+ P E+P G+PP++ I
Sbjct: 626  DINELIASPSVAYALVCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGI 685

Query: 1583 QHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDG 1404
            +H IDL+PGASLPN A YR +P              +K  +R+S+SPCAVP + + KKDG
Sbjct: 686  EHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDG 745

Query: 1403 SWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKT 1224
            SWRMC+D RAIN ITI+Y  PIPRL+D+LD+L+G+ +FSK++L++GYHQI ++ GDEWKT
Sbjct: 746  SWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVELRSGYHQIHMKLGDEWKT 805

Query: 1223 AFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLK 1044
            AFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL PF+ KFVV+YFDDILIYSK+  EH  
Sbjct: 806  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFN 865

Query: 1043 HLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPT 864
            HLR++   LR  +L+ N++KC+F    + FLG++V   G++VD+ KV+AI  WPTPKT +
Sbjct: 866  HLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVS 925

Query: 863  DVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGEYQESSVQQIKEKLCTAPVLA 687
             V SFLGL  FY RF+++FSTIAAP+    KKG  FTWG  QE++   +K KL  AP+L 
Sbjct: 926  QVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQENAFHMLKHKLTHAPLLQ 985

Query: 686  LPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKH 507
            LPDF+K FE++C+AS  G+G VL QEGK V Y SEKL      ++ Y+ E YA+VR L+ 
Sbjct: 986  LPDFNKTFELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLET 1045

Query: 506  WEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNAL 327
            W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F++ F +++KHK   +N + NAL
Sbjct: 1046 WQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIANAL 1105

Query: 326  SRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLC 147
            SRR TL+T L  ++ G E +K+ Y  D+DF ++    K GR    + I DG++F+ N+LC
Sbjct: 1106 SRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLC 1165

Query: 146  LPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGK 6
            +P  S+R  +++E H G    H   + T  +++  +FWPQ+RRDVG+
Sbjct: 1166 IPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGR 1212


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  787 bits (2032), Expect = 0.0
 Identities = 381/743 (51%), Positives = 521/743 (70%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL+ F+ KFVVVYFDDILIYSK+ 
Sbjct: 825  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSM 884

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EH+ H+R+V  ALR+ +L+ N++KC+F    + FLG++V   GI+VD+ KV  I  WP 
Sbjct: 885  DEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPM 944

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PKT T VRSFLGLA FYRRF+++FSTIAAP+++  KKG  FSWG+ QE +F  +K+KL  
Sbjct: 945  PKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTH 1004

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L DF+K FE++CDAS  G+G VL QE KP+ Y S+KL  S   ++ Y+ E YA+V
Sbjct: 1005 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALV 1064

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G +N 
Sbjct: 1065 RTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENI 1124

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +ADALSRR TLL +L  ++ G E IK+ Y  D+DF ++    K G+    Y V DG++F+
Sbjct: 1125 IADALSRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDGKGWNKYIVSDGFVFR 1184

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G + T D+++  +FWP++RRDV ++V RC  C
Sbjct: 1185 ANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTC 1244

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLY+ LP+P   WED+SM+FVLGLPRT++G+DS+ VVVDRFSKM+HFI C
Sbjct: 1245 QKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPC 1304

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             KTDDA+ +A LFFREI+RLHG+P TIVSDRD KF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1305 HKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQ 1364

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  MLR +  +  K W+  LP +EF+YN   + +T+  PF++VY  +P+
Sbjct: 1365 TDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPR 1424

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P     +  A   AE + ++H+   E+++R N  YK   DK R+   FE GD
Sbjct: 1425 APIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKGRKEINFEPGD 1484

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK RFP     KL  +  GP ++  KINDNAY +++P+D  +S TFN+ D+  Y
Sbjct: 1485 LVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGVSPTFNIADLKPY 1544

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++    GE D
Sbjct: 1545 LGE---EVELESRTTQMQEGEND 1564



 Score =  682 bits (1760), Expect = 0.0
 Identities = 333/768 (43%), Positives = 491/768 (63%), Gaps = 27/768 (3%)
 Frame = -2

Query: 2225 IDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGW 2046
            ++  + +QR  LF+   V+  + CR+IID GS  NL +  + + L L  + HP+PY + W
Sbjct: 471  MEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKLALTTKPHPHPYHIQW 530

Query: 2045 IKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSY 1866
            +   G + VTK  ++  +IG  Y           D  +++ GRPW +D+D +H GRSN Y
Sbjct: 531  LNNSGKVKVTKLVRINFAIGS-YRDVVDCDVVPMDACNILLGRPWQFDSDCMHHGRSNQY 589

Query: 1865 EFMWGKTKIILIP-------------GKRKSPEENVNMET----------RNMFHTVTGR 1755
              +    KIIL+P               +   E N N++           +      T  
Sbjct: 590  SLIHHDKKIILLPMSPEAIVRDDVAKATKAKTENNKNIKVVGNNKDGIKLKGHCLLATKT 649

Query: 1754 ELQEHIGEVDEGIALIVKGKAEENSELTHER---VRPLLDEFHDLGPAELPSGVPPLQDI 1584
            ++ E         AL+ K       ++ H     +  +L E+ D+ P+E+P G+PP++ I
Sbjct: 650  DVNELFASTTVAYALVCKDALISIQDMQHSLPPVITNILQEYSDVFPSEIPEGLPPIRGI 709

Query: 1583 QHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMSPCAVPALQILKKDG 1404
            +H IDL+PGASLPN A YR +P              +K  +R+S+SPCAVP + + KKDG
Sbjct: 710  EHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDG 769

Query: 1403 SWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNGYHQIRIREGDEWKT 1224
            +WRMC+D RAIN ITI+Y  PIPRL+D+LD+L+GA +FSK+DL++GYHQIR++ GDEWKT
Sbjct: 770  TWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKT 829

Query: 1223 AFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFDDILIYSKTEIEHLK 1044
            AFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL  F+ KFVV+YFDDILIYSK+  EH+ 
Sbjct: 830  AFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVD 889

Query: 1043 HLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEKVQAICEWPTPKTPT 864
            H+R++   LR  +L+ N++KC+F    + FLG++V   G++VD+ KV+AI  WP PKT T
Sbjct: 890  HMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTIT 949

Query: 863  DVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGEYQESSVQQIKEKLCTAPVLA 687
             V SFLGL  FYRRF+++FSTIAAP+ +  KKG  F+WG+ QE +   +K+KL  AP+L 
Sbjct: 950  QVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLLQ 1009

Query: 686  LPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTVYESEFYAVVRALKH 507
            LPDF+K FE++C+AS  G+G VL QEGKPV Y SEKL  S   ++ Y+ E YA+VR L+ 
Sbjct: 1010 LPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLET 1069

Query: 506  WEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFILKHKSDSQNKVVNAL 327
            W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F++ F +++KHK   +N + +AL
Sbjct: 1070 WQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADAL 1129

Query: 326  SRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDYHI*DGYLFKGNQLC 147
            SRR TL+  L  ++ G E +K+ Y  D+DF ++    K G+    Y + DG++F+ N+LC
Sbjct: 1130 SRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDGKGWNKYIVSDGFVFRANKLC 1189

Query: 146  LPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVGKI 3
            +P  S+R  +++E H G    H   + T  +++  +FWP++RRDV ++
Sbjct: 1190 IPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRL 1237


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  784 bits (2025), Expect = 0.0
 Identities = 383/743 (51%), Positives = 525/743 (70%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKT +GLYEWLVMPFGL+NAPSTFMR+MN VL+ F+ +FV+VYFDDIL+YSK+ 
Sbjct: 1014 DEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSL 1073

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EH++HL+ VLE LR+ KLY N+KKC+F   +++FLGF+V  +G++VDE+KV+ IREWP+
Sbjct: 1074 EEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPS 1133

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PK+  +VRSF GLA FYRRF+++FST+AAP+++ +KK   F W + QED+FQ +KEKL  
Sbjct: 1134 PKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTH 1193

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            APVL+L DF K FE++CDAS  GIG VL Q+ KP+ Y S+KLG +   +  Y+ E YA+V
Sbjct: 1194 APVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALV 1253

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            RAL+  +HYL  +EF++++DH++LK+L  Q+ +N  HARWV FI+ F +++K+K G  N 
Sbjct: 1254 RALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNV 1313

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            VADALSRR  LL+ L  +L+GFE IK  Y  DSDF +I+ + ++    + Y+  DG+LF 
Sbjct: 1314 VADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSCEKFAFGK-YYRHDGFLFY 1372

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +SLRE  IRE HGG    H G   TI ++ D + WP ++RDV +I ERC  C
Sbjct: 1373 DNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVERICERCPTC 1432

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            + +K ++Q  GLY  LPIP + W D+SM+FV+GLPRT+ GKDSI VVVDRFSKM+HFI C
Sbjct: 1433 KQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPC 1492

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             KTDDA  +A LFFRE++RLHGMPKTIVSDRDTKF S+F   LW +LG+KL FS+TCH Q
Sbjct: 1493 HKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQ 1552

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  +LR L  +  K W+  LP +EF+YN   + +++ SPF++VY   P 
Sbjct: 1553 TDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPT 1612

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              LDL  +P     S+  +  AE V QIH++  ++++   + Y    +K R+  IF  GD
Sbjct: 1613 TPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEGD 1672

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK RFP     KL  +  GP ++  +IN+NAY +++    N+SN+FNV D++ +
Sbjct: 1673 LVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVADLFPF 1732

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              +         RS+ F +GE D
Sbjct: 1733 IAD-----NTDLRSNPFQLGEDD 1750



 Score =  613 bits (1581), Expect = e-172
 Identities = 295/558 (52%), Positives = 404/558 (72%), Gaps = 4/558 (0%)
 Frame = -2

Query: 1664 RVRPLLDEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXX 1485
            +++ LL ++ D+ P E P G+PP++ I+H ID VPGASLPN   YR +P           
Sbjct: 872  KIKFLLQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVT 931

Query: 1484 XXXEKRVIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLA 1305
               E+  IR+SMSPCAVP L + KKDGSWRMC+D RAIN IT+KY  PIPRL+D+LD+L 
Sbjct: 932  ELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELH 991

Query: 1304 GAKIFSKIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVL 1125
            G+ IFSK+DLK+GYHQIR++EGDEWKTAFKT +GLYEWLVMPFGL+NAPSTFMR+MN VL
Sbjct: 992  GSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHVL 1051

Query: 1124 NPFLNKFVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGF 945
              F+ +FV++YFDDIL+YSK+  EH++HL+ +LEVLR  KLY N+KKC+F   +++FLGF
Sbjct: 1052 RAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGF 1111

Query: 944  IVGENGVQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG 765
            +V  +GV+VDEEKV+AI EWP+PK+  +V SF GL  FYRRF+++FST+AAP+T+ +KK 
Sbjct: 1112 VVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKN 1171

Query: 764  -RFTWGEYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYM 588
              F W + QE + Q +KEKL  APVL+LPDF K FE++C+AS  GIG VL Q+ KP+ Y 
Sbjct: 1172 VGFKWEQAQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYF 1231

Query: 587  SEKLGESRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHA 408
            SEKLG +   +  Y+ E YA+VRAL+  +HYL  +EF++++DH++L+HL  Q+ +N  HA
Sbjct: 1232 SEKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHA 1291

Query: 407  RWVTFLQKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEI 228
            RWV F++ F +++K+K    N V +ALSRR  L++ L  +L+GFE +K  Y  DSDF +I
Sbjct: 1292 RWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKI 1351

Query: 227  WETLKQ---GRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIG 57
            + + ++   G+    Y+  DG+LF  N+LC+P  SLRE  IRE H G    H     TI 
Sbjct: 1352 YSSCEKFAFGK----YYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIK 1407

Query: 56   LVSDRYFWPQLRRDVGKI 3
            ++ D + WP ++RDV +I
Sbjct: 1408 VMQDHFHWPHMKRDVERI 1425



 Score = 76.3 bits (186), Expect = 3e-10
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = -2

Query: 2294 SDKKEDRLMEKQGKIFIVHR--SYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEEN 2121
            S   ED     +G++ +  +  S +    + +QR+ LF    +VN K+C +IID GS  N
Sbjct: 697  SSSTEDYEAPSKGELLVTMKALSVIAKTDEQEQRENLFHSSCMVNDKVCSLIIDGGSCTN 756

Query: 2120 LITRGLSKTLGLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKK 1980
            + +  + + LGL+  +HP PYK+ W+   G+M V +  KVP+SIGKK
Sbjct: 757  VASETMVEKLGLKVMKHPRPYKLQWLNEDGEMSVDRQVKVPLSIGKK 803


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  783 bits (2021), Expect = 0.0
 Identities = 378/743 (50%), Positives = 520/743 (69%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKT FKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL+ F+ +FVVVYFDDILIYSK+ 
Sbjct: 866  DEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSKSL 925

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             EHL+HLR+V  ALR+ +L+ N+ KC+F    + FLG++V   GI+VD+ K+  I  WP 
Sbjct: 926  EEHLEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPH 985

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PKT T VRSFLGLA FYRRF+R+FSTIAAP+++  KK   F WG  QE++F  +K+KL  
Sbjct: 986  PKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTY 1045

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L +F+K FE++CDAS  G+G VL Q+ KP+ Y S+K       ++ Y+ E YA+V
Sbjct: 1046 APLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALV 1105

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G +N 
Sbjct: 1106 RTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENV 1165

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +ADALSRR T+L++L  ++ G E IK+ Y  D++F ++ +  K+GR    + + DG++F+
Sbjct: 1166 IADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGRTWNKFVLNDGFVFR 1225

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G + T D+++  +FWP++RRDV + V RC  C
Sbjct: 1226 ANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTC 1285

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLYM LP+P   WED+SM+FVLGLPRT++G+DSI VVVDRFSKM+HFI C
Sbjct: 1286 QRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPC 1345

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             K+DDA  VA LFFREIIRLHG+P TIVSDRDTKF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1346 HKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQ 1405

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  MLR +     K W+  LP +EF+YN   + +T+  PFE+VY  +P+
Sbjct: 1406 TDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPR 1465

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P     +  A+  +E + +IH+   E+++R N  YK   DK R+  +F  GD
Sbjct: 1466 APIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGD 1525

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK+RFP     KL  +  GP ++  KINDNAY +E+P+D  +S TFN+ D+  Y
Sbjct: 1526 LVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPY 1585

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++ F  GE D
Sbjct: 1586 LGE---EDELPSRTTSFQEGEDD 1605



 Score =  639 bits (1649), Expect = e-180
 Identities = 323/784 (41%), Positives = 478/784 (60%), Gaps = 43/784 (5%)
 Frame = -2

Query: 2234 SYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYK 2055
            S  +   + +QR  LF   GVV  +  R+IID GS  NL +  + + L L    HP+PY 
Sbjct: 493  SVQVTQAEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMVEKLSLITRPHPHPYY 552

Query: 2054 VGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRS 1875
            + W    G + VT+T +V  SI   Y               L+ GRPW +D + +H  R 
Sbjct: 553  IQWFNNSGKVKVTRTVRVHFSIST-YADYVDCDVVPMQACSLLLGRPWQFDKNSVHHDRK 611

Query: 1874 NSYEFMWGKTKIILIPGKRKSP-EENVN------METRNMFHTVTGRELQEHI---GEVD 1725
            N Y  +     I L+P   +S  ++++N       E     + +  +E ++ +       
Sbjct: 612  NLYTLVHKDKNITLLPMTPESILKDDINRANKAKQEKNKSENQIVAKEFEQQMQSNNNKQ 671

Query: 1724 EGIALIVKGKA--------------------------------EENSELTHERVRPLLDE 1641
              +A  +K K+                                E+        V  +L E
Sbjct: 672  SSVACEIKLKSACLLATKSDIDDLDFSKSVCYAFVCKEALFSFEDVPSSLPPAVTNILQE 731

Query: 1640 FHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVI 1461
            F D+ P ++P G+PP++ I+H IDL+PGASLPN A YR +P              +K  I
Sbjct: 732  FTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGYI 791

Query: 1460 RDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKI 1281
            R+S+SPCAVP + + KKDG+ RMC+D R IN ITI+Y  PIPRL+D+LD+L+G+ IFSK+
Sbjct: 792  RESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIFSKV 851

Query: 1280 DLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFV 1101
            DL++GYHQIR++ GDEWKT FKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL  F+ +FV
Sbjct: 852  DLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFV 911

Query: 1100 VIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQ 921
            V+YFDDILIYSK+  EHL+HLR++   LR  +L+ N+ KC+F    + FLG++V   G++
Sbjct: 912  VVYFDDILIYSKSLEEHLEHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIE 971

Query: 920  VDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGEY 744
            VD+ K++AI  WP PKT T V SFLGL  FYRRF+R+FSTIAAP+ +  KK   F WG  
Sbjct: 972  VDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTA 1031

Query: 743  QESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESR 564
            QE +   +K+KL  AP+L LP+F+K FE++C+AS  G+G VL Q+GKPV Y SEK     
Sbjct: 1032 QEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPS 1091

Query: 563  QRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQK 384
              ++ Y+ E YA+VR L+ W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F++ 
Sbjct: 1092 LNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIET 1151

Query: 383  FNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGR 204
            F +++KHK   +N + +ALSRR T+++ L  ++ G E +K+ Y  D++F ++ +  K+GR
Sbjct: 1152 FPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEGR 1211

Query: 203  PTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQL 24
                + + DG++F+ N+LC+P  S+R  +++E H G    H   + T  +++  +FWP++
Sbjct: 1212 TWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKM 1271

Query: 23   RRDV 12
            RRDV
Sbjct: 1272 RRDV 1275


>ref|XP_013689613.1| PREDICTED: uncharacterized protein LOC106393458 [Brassica napus]
          Length = 2061

 Score =  778 bits (2009), Expect = 0.0
 Identities = 377/717 (52%), Positives = 512/717 (71%), Gaps = 1/717 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN +L+ F+  FVVVYFDDIL+YSK  
Sbjct: 1337 DEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHILRSFIGIFVVVYFDDILVYSKCL 1396

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +H++HLR+VL+ LR+ KLY N+KKC+F   +++FLGF+V  +G++VD++K++ I+EWP+
Sbjct: 1397 EDHIEHLRAVLDVLRKEKLYANLKKCTFCTDNLVFLGFVVSADGVKVDQEKIKAIQEWPS 1456

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            P T  +VRSF GLA FYRRF+++FST+AAP+++ +KK   F WGE QE +FQ +KEKL  
Sbjct: 1457 PTTVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEIIKKDVGFKWGEVQEAAFQLLKEKLTQ 1516

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            +P+L L DFSK FE++ DAS  GIGAVL Q+ +P+ Y S+KL  +   +  Y+ E YA+V
Sbjct: 1517 SPLLILPDFSKTFEIEWDASGIGIGAVLMQDKRPIAYFSEKLSGATLNYATYDKELYALV 1576

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            RAL+ W+HYL  +EF++++DH++LKYL  Q  ++  HARWV FI+ F +++K+K G +N 
Sbjct: 1577 RALQTWQHYLWPKEFVIHTDHESLKYLKGQSKLSKRHARWVEFIETFPYVIKYKQGKENI 1636

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            VADALSRR  LLT L  +L+GFE IKE YE D DF E +++  +      Y   DG+LF 
Sbjct: 1637 VADALSRRYVLLTTLDAKLLGFEQIKEMYESDPDFQEAYKSCAKYASGH-YFRHDGFLFY 1695

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P  SLR+  +RE HGGS   H G   T+ ++ D ++WP ++RDVG+I  RC  C
Sbjct: 1696 DNRLCVPNCSLRDLFVREFHGGSLMGHFGIAKTLKVLQDHFYWPHMKRDVGRICGRCTTC 1755

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            +++K + Q  GLY  LPIP + W D+SM+FV+GLPRT+ GKDSI VVVDRFSKM+HFIAC
Sbjct: 1756 KLAKSKVQPHGLYTPLPIPTHPWNDISMDFVMGLPRTRTGKDSIFVVVDRFSKMAHFIAC 1815

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             KTDDA  VA LFF+E++RLHGMP+TIVSDRDTKF S+F   LW +LG+KL FS+TCH Q
Sbjct: 1816 NKTDDALHVANLFFKEVVRLHGMPRTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQ 1875

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTLG +LR    +  K W+  LP  EF+YN   + +++ S FE+VY   P 
Sbjct: 1876 TDGQTEVVNRTLGTLLRAFIKKNLKSWEDYLPHCEFAYNHAMHSASKFSTFEIVYGFNPI 1935

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              LDL  +P     S+  +  AE V QIH++   +L+   + Y  + +K RR  IFEVGD
Sbjct: 1936 SPLDLIPLPECERVSMDGKKKAEMVQQIHEQAKRNLEDKTKQYAKQANKGRREMIFEVGD 1995

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDI 2792
             V VHLRK RFP     KL  + +GP  ++ +INDNAY +++    +IS++FNV D+
Sbjct: 1996 QVWVHLRKERFPKERKSKLMPRINGPFEVTKRINDNAYKLDLQGKYDISDSFNVTDL 2052



 Score =  686 bits (1771), Expect = 0.0
 Identities = 348/782 (44%), Positives = 511/782 (65%), Gaps = 20/782 (2%)
 Frame = -2

Query: 2288 KKEDRLMEKQGKIFIVHRSYLIDNTDGD--QRKKLFRIPGVVNGKLCRIIIDSGSEENLI 2115
            ++E  +   +G++ +  R   +   +G+  QR+ LF    +V GK+C +IID GS  N+ 
Sbjct: 969  EEESEVEPVKGRLLVTRRLLNLQAKNGELEQRENLFYTRCMVQGKVCSLIIDGGSCVNVA 1028

Query: 2114 TRGLSKTLGLEEEEHPNPYKVGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYS 1935
            +  + K LGL+ ++HP  Y++ W+   G+M V+    VPI+IG+ Y           + S
Sbjct: 1029 SETMVKKLGLKIQKHPRSYRLQWLNEEGEMRVSTQVLVPIAIGR-YEDEVLCDVLPMEAS 1087

Query: 1934 DLIFGRPWLYDTDVIHRGRSNSYEFMWGKTKIILIPGK-----------RKSPEENVNME 1788
             ++ GRPW YD  V H G +N + F +   K +L+P             +K  E+ ++++
Sbjct: 1088 HILLGRPWQYDRRVSHDGFTNKHSFEFNGKKTVLVPLSPKEVREDQLQLQKKKEKEIDLK 1147

Query: 1787 T-RNMFHTVTGR--ELQEHIGEVDEGIALIVKGKAEENSELTHERVRPL---LDEFHDLG 1626
               N  H++  +  +++  +   +  I LI K      ++ T +    L   L E+ D+ 
Sbjct: 1148 PDHNKHHSLYAKPGDIKRILYSQNSIILLIFKETLLTVTDHTPDHPSELVFILQEYADVF 1207

Query: 1625 PAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRVIRDSMS 1446
            P + P G+PP++ I+H ID VPG +LPN   YR +P              EK  IR+S+S
Sbjct: 1208 PDDSPIGLPPVRGIEHQIDFVPGCTLPNRPAYRTNPVETKELQKQVEELMEKGHIRESLS 1267

Query: 1445 PCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSKIDLKNG 1266
            PCAVP L + KKDGSWRMC+D RAIN IT+KY  PIPRL+D+LD+L G+ IFSKIDLK+G
Sbjct: 1268 PCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSCIFSKIDLKSG 1327

Query: 1265 YHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKFVVIYFD 1086
            YHQIR++EGDEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN +L  F+  FVV+YFD
Sbjct: 1328 YHQIRMKEGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHILRSFIGIFVVVYFD 1387

Query: 1085 DILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGVQVDEEK 906
            DIL+YSK   +H++HLR++L+VLR  KLY N+KKC+F   +++FLGF+V  +GV+VD+EK
Sbjct: 1388 DILVYSKCLEDHIEHLRAVLDVLRKEKLYANLKKCTFCTDNLVFLGFVVSADGVKVDQEK 1447

Query: 905  VQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGEYQESSV 729
            ++AI EWP+P T  +V SF GL  FYRRF+++FST+AAP+T+ +KK   F WGE QE++ 
Sbjct: 1448 IKAIQEWPSPTTVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEIIKKDVGFKWGEVQEAAF 1507

Query: 728  QQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGESRQRWTV 549
            Q +KEKL  +P+L LPDFSK FE++ +AS  GIG VL Q+ +P+ Y SEKL  +   +  
Sbjct: 1508 QLLKEKLTQSPLLILPDFSKTFEIEWDASGIGIGAVLMQDKRPIAYFSEKLSGATLNYAT 1567

Query: 548  YESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQKFNFIL 369
            Y+ E YA+VRAL+ W+HYL  +EF++++DH++L++L  Q  ++  HARWV F++ F +++
Sbjct: 1568 YDKELYALVRALQTWQHYLWPKEFVIHTDHESLKYLKGQSKLSKRHARWVEFIETFPYVI 1627

Query: 368  KHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQGRPTLDY 189
            K+K   +N V +ALSRR  L+T L  +L+GFE +KE YE D DF E +++  +   +  Y
Sbjct: 1628 KYKQGKENIVADALSRRYVLLTTLDAKLLGFEQIKEMYESDPDFQEAYKSCAK-YASGHY 1686

Query: 188  HI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQLRRDVG 9
               DG+LF  N+LC+P  SLR+  +RE H GS   H     T+ ++ D ++WP ++RDVG
Sbjct: 1687 FRHDGFLFYDNRLCVPNCSLRDLFVREFHGGSLMGHFGIAKTLKVLQDHFYWPHMKRDVG 1746

Query: 8    KI 3
            +I
Sbjct: 1747 RI 1748


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  776 bits (2003), Expect = 0.0
 Identities = 375/743 (50%), Positives = 518/743 (69%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL+ F+ +FVVVYFDDILIYS++ 
Sbjct: 881  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSL 940

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +HL HLR+V  ALR+ +L+ N+ KC+F    + FLG++V   GI+VD+ K+  I  WP 
Sbjct: 941  EDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQ 1000

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            PKT T VRSFLG A FYRRF+R+FSTIAAP+++  KK   +SWG  QE++F  +K+KL  
Sbjct: 1001 PKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTH 1060

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L DF+K FE++CDAS  G+G VL Q+ KP+ Y S+KL      ++ Y+ E YA+V
Sbjct: 1061 APLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALV 1120

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G  N 
Sbjct: 1121 RTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKDNV 1180

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +ADALSRR T+L++L  ++ G E IK+ Y  D+DF ++ E  ++GR    + + +G++F+
Sbjct: 1181 IADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCREGRTWNKFIINNGFVFR 1240

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G +   D+++  +FWP++RRDV + V RC  C
Sbjct: 1241 ANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWPRMRRDVERFVARCTTC 1300

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLYM LP+P   WED+SM+FVLGLPRT++G+DSI VVVDRFSKM+HFI C
Sbjct: 1301 QKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPC 1360

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             K+DDA+ VA LFFREIIRLHG+P TIVSDRD KF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1361 HKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQ 1420

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NR+L  MLR +     K W+  LP +EF+YN   + +T+  PFE+VY  +P+
Sbjct: 1421 TDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPR 1480

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  IP     +  A+  AE + ++H+   E+++R N  YK   DK R+  +F  GD
Sbjct: 1481 APIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGD 1540

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK+RFP     KL  +  GP ++  KINDNAY +E+P+D  +S TFN+ D+  Y
Sbjct: 1541 LVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGVSPTFNIADLKPY 1600

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++    GE D
Sbjct: 1601 LGE---EDELPSRTTSVQEGEDD 1620



 Score =  637 bits (1643), Expect = e-179
 Identities = 322/786 (40%), Positives = 475/786 (60%), Gaps = 45/786 (5%)
 Frame = -2

Query: 2234 SYLIDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYK 2055
            S  +   + +QR  LF   GVV  +  R+IID GS  NL +  + + L L    HP+PY 
Sbjct: 509  SVQVTQVEQNQRHNLFHTKGVVKERSVRVIIDGGSCNNLASMEMVEKLSLTTRPHPHPYY 568

Query: 2054 VGWIKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRS 1875
            + W    G + VT+T +V  SI   Y               ++ GRPW +D + +H GR+
Sbjct: 569  IQWFNNSGKVKVTRTVRVHFSIA-TYSDFVDCDVVPMQACSVLLGRPWQFDKNSVHHGRT 627

Query: 1874 NSYEFMWGKTKIILIPGKRKSPE----------ENVNMETRNMFHTVTGRELQEH--IGE 1731
            N Y  +     I L+P    SPE               +     + +  +E ++H    +
Sbjct: 628  NQYTLVHKDQNITLLP---MSPEHIMKDDIARASKAKQDLHKSENQIVAKEFEQHNKPNK 684

Query: 1730 VDEGIALIVKGKA--------------------------------EENSELTHERVRPLL 1647
                +A  +K K+                                E+        V  +L
Sbjct: 685  SSSSVASEIKLKSGCLLATKSDITDLDITTSVCYAFVCKEVLFSFEDMPSSLPPAVINIL 744

Query: 1646 DEFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKR 1467
             EF D+ P ++P G+PP++ I+H IDL+PGASLPN A YR +P              +K 
Sbjct: 745  QEFADVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKG 804

Query: 1466 VIRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFS 1287
             IR+S+SPCAVP + + KKDG+ RMC+D R IN ITI+   PIPRL+D+LD+L+G+ IFS
Sbjct: 805  YIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRXRHPIPRLDDMLDELSGSIIFS 864

Query: 1286 KIDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNK 1107
            K+DL++GYHQIR++ GDEWKTAFKTK GLYEWLVMPFGL+NAPSTFMR+MN+VL  F+ +
Sbjct: 865  KVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGR 924

Query: 1106 FVVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENG 927
            FVV+YFDDILIYS++  +HL HLR++   LR  +L+ N+ KC+F    + FLG++V   G
Sbjct: 925  FVVVYFDDILIYSRSLEDHLDHLRAVFTALRDARLFGNLGKCTFCTDRVSFLGYVVTPQG 984

Query: 926  VQVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWG 750
            ++VD+ K++AI  WP PKT T V SFLG   FYRRF+R+FSTIAAP+ +  KK   ++WG
Sbjct: 985  IEVDKAKIEAIESWPQPKTVTQVRSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWG 1044

Query: 749  EYQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGE 570
              QE +   +K+KL  AP+L LPDF+K FE++C+AS  G+G VL Q+GKPV Y SEKL  
Sbjct: 1045 TAQEEAFTVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSG 1104

Query: 569  SRQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFL 390
                ++ Y+ E YA+VR L+ W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F+
Sbjct: 1105 PSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFI 1164

Query: 389  QKFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQ 210
            + F +++KHK    N + +ALSRR T+++ L  ++ G E +K+ Y  D+DF ++ E  ++
Sbjct: 1165 ETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENCRE 1224

Query: 209  GRPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWP 30
            GR    + I +G++F+ N+LC+P  S+R  +++E H G    H   +    +++  +FWP
Sbjct: 1225 GRTWNKFIINNGFVFRANKLCIPASSIRLLLLQEAHGGGLMGHFGVKKMEDVLATHFFWP 1284

Query: 29   QLRRDV 12
            ++RRDV
Sbjct: 1285 RMRRDV 1290


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  774 bits (1998), Expect = 0.0
 Identities = 372/743 (50%), Positives = 520/743 (69%), Gaps = 1/743 (0%)
 Frame = -3

Query: 4939 DEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLKPFMNKFVVVYFDDILIYSKTE 4760
            DEWKTAFKTK GLYEWLVMPFGL+NAPSTF+R+MN+VL+ F+ +FVVVYFDDILIYS++ 
Sbjct: 850  DEWKTAFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSI 909

Query: 4759 TEHLKHLRSVLEALRENKLYMNIKKCSFMMKSILFLGFIVGENGIQVDEDKVRVIREWPT 4580
             +H  HLR+V +ALR+ +L+ N++KC+F    + FLG++V   GI+VD+ KV  I  WP 
Sbjct: 910  EDHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPV 969

Query: 4579 PKTPTDVRSFLGLATFYRRFIRNFSTIAAPISDCLKKG-RFSWGEEQEDSFQQIKEKLCT 4403
            P T T VRSFLGLA FYRRF+++FSTIAAP+ +  K+   F+W   Q ++F  +K+KL  
Sbjct: 970  PTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTH 1029

Query: 4402 APVLALRDFSKLFEVDCDASMRGIGAVLSQEVKPLEYMSDKLGESRQRWTVYESEFYAVV 4223
            AP+L L DF+K FE++CDAS  G+G VL QE KP+EY S+KL      ++ Y+ E +A+V
Sbjct: 1030 APLLQLPDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSGPSLNYSTYDKELFALV 1089

Query: 4222 RALKHWEHYLLHREFILYSDHQALKYLSTQKIVNPMHARWVTFIQKFNFILKHKSGSQNK 4043
            R L+ W+HYL  +EF+++SDH++LK++ +Q  +N  HA+WV FI+ F +++KHK G +N 
Sbjct: 1090 RTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPYVIKHKKGKENV 1149

Query: 4042 VADALSRRATLLTELKIELVGFEIIKECYEGDSDFGEIWETLKQGRPRQDYHVQDGYLFK 3863
            +ADALSRR  +L++L  ++ G E IKE Y  D DF ++    K+GR    + + +G++F+
Sbjct: 1150 IADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEGRTWNKFVLTNGFVFR 1209

Query: 3862 GNQLCLPRTSLREAVIRELHGGSFSAHLGREATIDLVSDRYFWPQLRRDVGKIVERCYIC 3683
             N+LC+P +S+R  +++E HGG    H G + T D+++D +FWP++RRDV + V RC  C
Sbjct: 1210 ANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTC 1269

Query: 3682 QISKGRAQNTGLYMLLPIPENIWEDLSMEFVLGLPRTQRGKDSIMVVVDRFSKMSHFIAC 3503
            Q +K R    GLYM LP+P   WED+SM+FVLGLPRT++G+DSI VVVDRFSKM+HFI C
Sbjct: 1270 QKAKLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPC 1329

Query: 3502 RKTDDASGVAGLFFREIIRLHGMPKTIVSDRDTKFTSHFMGFLWRRLGSKLNFSSTCHSQ 3323
             K+DDA+ VA LFFREI+RLHG+P TIVSDRDTKF SHF   LW +LG+KL FS+TCH Q
Sbjct: 1330 HKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQ 1389

Query: 3322 TDC*TEVTNRTLGNMLRCLCAEKPKQWDVSLPQMEFSYNSMKNKSTRKSPFEVVYTQVPK 3143
            TD  TEV NRTL  MLR +  +  K W+  LP +EF+YN  ++ +T+K PFE+VY  +P+
Sbjct: 1390 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPR 1449

Query: 3142 ISLDLASIPGDPDKSVAAEHLAERVTQIHKEVTEHLQRANEAYKARVDKHRRVQIFEVGD 2963
              +DL  +P     +  A++ AE + ++H+   E+++R N  YK    K ++   FE GD
Sbjct: 1450 APIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGD 1509

Query: 2962 LVMVHLRKNRFPVGTYGKLKHKKHGPVRISWKINDNAYVVEIPSDMNISNTFNVYDIYRY 2783
            LV +HLRK+RFP     KL  +  GP ++  KINDN Y +E+P+D  +S TFN+ D+  Y
Sbjct: 1510 LVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGVSPTFNIADLKPY 1569

Query: 2782 FPEGPLYTEAGSRSSLFAVGEPD 2714
              E     E  SR++    GE D
Sbjct: 1570 LGE---EDELESRTTQMQEGEDD 1589



 Score =  660 bits (1704), Expect = 0.0
 Identities = 329/785 (41%), Positives = 485/785 (61%), Gaps = 47/785 (5%)
 Frame = -2

Query: 2225 IDNTDGDQRKKLFRIPGVVNGKLCRIIIDSGSEENLITRGLSKTLGLEEEEHPNPYKVGW 2046
            ++  + +QR  LF+   V+  + CR+IID GS  NL +  + + L L  + HP PY + W
Sbjct: 479  MERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAEMVEKLALSTQPHPQPYYIQW 538

Query: 2045 IKGGGDMWVTKTCKVPISIGKKYXXXXXXXXXXXDYSDLIFGRPWLYDTDVIHRGRSNSY 1866
            +   G + VT+  +V  +IG  Y               +  GRPW +D D +H G+SN Y
Sbjct: 539  LNSSGKVKVTRLVRVHFAIGS-YHDSINCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQY 597

Query: 1865 EFMWGKTKIILIPGKRKSPE-----------ENVNMETRNMFHTVTGRELQEH------- 1740
             F+    K++L P    SPE           +  N E     H +   EL++H       
Sbjct: 598  SFVHNGKKLVLHP---MSPEVILKDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNS 654

Query: 1739 ---------------------IGEVDEGI----ALIVKGKA---EENSELTHERVRPLLD 1644
                                 + EVD       AL+ K      E+        V  LL 
Sbjct: 655  VQNNKNEIKLKGSCFIATKSDLDEVDTDTVVCYALVCKETLFPIEDTPISLPPPVTNLLQ 714

Query: 1643 EFHDLGPAELPSGVPPLQDIQHHIDLVPGASLPNLAHYRMSPXXXXXXXXXXXXXXEKRV 1464
            E+ D+ P E+P G+PP++ I+H IDL+PGASLPN A YR +P              +K  
Sbjct: 715  EYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGY 774

Query: 1463 IRDSMSPCAVPALQILKKDGSWRMCIDSRAINKITIKYEFPIPRLEDLLDQLAGAKIFSK 1284
            +R+S+SPC++P L + KKDGSWRMC+D RAIN ITI+Y  PIPRL+D+LD+L+G+ +FSK
Sbjct: 775  VRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSK 834

Query: 1283 IDLKNGYHQIRIREGDEWKTAFKTKEGLYEWLVMPFGLSNAPSTFMRMMNQVLNPFLNKF 1104
            IDL++GYHQIR++ GDEWKTAFKTK GLYEWLVMPFGL+NAPSTF+R+MN+VL  F+ +F
Sbjct: 835  IDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRF 894

Query: 1103 VVIYFDDILIYSKTEIEHLKHLRSILEVLRANKLYMNIKKCSFMMKSILFLGFIVGENGV 924
            VV+YFDDILIYS++  +H  HLR++ + LR  +L+ N++KC+F    + FLG++V   G+
Sbjct: 895  VVVYFDDILIYSRSIEDHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGI 954

Query: 923  QVDEEKVQAICEWPTPKTPTDVCSFLGLETFYRRFIRNFSTIAAPITDCLKKG-RFTWGE 747
            +VD+ KV+AI  WP P T T V SFLGL  FYRRF+++FSTIAAP+ +  K+   FTW  
Sbjct: 955  EVDQAKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAA 1014

Query: 746  YQESSVQQIKEKLCTAPVLALPDFSKLFEVDCEASMRGIGTVLSQEGKPVEYMSEKLGES 567
             Q ++   +K+KL  AP+L LPDF+K FE++C+AS  G+G VL QEGKP+EY SEKL   
Sbjct: 1015 AQRNAFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSGP 1074

Query: 566  RQRWTVYESEFYAVVRALKHWEHYLLHREFILYSDHQALRHLSTQKTVNPMHARWVTFLQ 387
               ++ Y+ E +A+VR L+ W+HYL  +EF+++SDH++L+H+ +Q  +N  HA+WV F++
Sbjct: 1075 SLNYSTYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIE 1134

Query: 386  KFNFILKHKSDSQNKVVNALSRRATLVT*LKIELVGFEVVKECYEGDSDFGEIWETLKQG 207
             F +++KHK   +N + +ALSRR  +++ L  ++ G E +KE Y  D DF ++    K+G
Sbjct: 1135 SFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNCKEG 1194

Query: 206  RPTLDYHI*DGYLFKGNQLCLPRISLREAVIRELHSGSFSAHLARETTIGLVSDRYFWPQ 27
            R    + + +G++F+ N+LC+P  S+R  +++E H G    H   + T  +++D +FWP+
Sbjct: 1195 RTWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPK 1254

Query: 26   LRRDV 12
            +RRDV
Sbjct: 1255 MRRDV 1259