BLASTX nr result
ID: Papaver31_contig00034377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00034377
(2552 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 310 e-130
ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 310 e-129
ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumb... 295 e-128
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric... 300 e-127
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer ... 296 e-126
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 293 e-126
ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis... 301 e-125
ref|XP_010320982.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 289 e-125
ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumi... 283 e-125
gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera] 301 e-125
ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 291 e-125
ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 295 e-125
ref|XP_014523288.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 295 e-125
gb|ERM96738.1| hypothetical protein AMTR_s00202p00033660 [Ambore... 297 e-124
ref|XP_003602653.2| DNA topoisomerase [Medicago truncatula] gi|6... 295 e-124
ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 291 e-124
ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 291 e-124
ref|XP_008443143.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 281 e-124
ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 281 e-124
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 295 e-124
>ref|XP_008807899.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Phoenix dactylifera]
Length = 917
Score = 310 bits (795), Expect(2) = e-130
Identities = 201/480 (41%), Positives = 275/480 (57%), Gaps = 8/480 (1%)
Frame = -2
Query: 2413 QIRVLNVAEKPSAARKIVDVLSLEGRNL-VRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
+IRVLNVAEKPS A+ + ++LS G R VFEF ++ +LC M+VTSV
Sbjct: 9 RIRVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNRVFEF-EYAIGPQLCHMLVTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EFDD +F++W+ DP DL+ A +RK V ++TL+E+A C L LWLD
Sbjct: 68 TGHLMELEFDD-RFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTLEEEARSCQWLVLWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV +VC S + V RA+F AL+D +I A QN G N AVD R
Sbjct: 127 CDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDVRQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAFGPLNRSGK----TLKFGTSLLPHLEFITNRYWDRIKHV 1709
E+D +IG S++RF T+L + AF L+ +G L +G P L FI RYW+ H
Sbjct: 187 EIDLRIGASFTRFQTMLLRDAF-VLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245
Query: 1708 PTKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSL 1529
P +FWT+ C+HT+D G T F + R HL A+ + ++ TATV+ N+
Sbjct: 246 PEEFWTINCSHTSDEG-TTTFSWMRGHLFDY--TSAVIVYEMC-VEESTATVMNVRNQE- 300
Query: 1528 RHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLP 1349
+ PP PL+T+EL K AS Y+ MSS TM VAEELY+ ISYPRT SF + TDL
Sbjct: 301 KLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFS-VNTDLH 359
Query: 1348 RLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWS 1178
+VG Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS
Sbjct: 360 AIVGEQVGHPAWGSYAQRLL-DPEASLWRN---PSNGGHNDKAHPPIHPTKFSAGEPGWS 415
Query: 1177 TDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
D R+Y +VVR+FLA +S+ ++T + + E A G + +Y D++ F SW
Sbjct: 416 QDHNRLYELVVRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAK-NYLDVYRFESW 474
Score = 184 bits (468), Expect(2) = e-130
Identities = 120/323 (37%), Positives = 169/323 (52%), Gaps = 27/323 (8%)
Frame = -3
Query: 984 IPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG-Y 811
+P Y GQ P L G T L M K G GTD+TMH H++K LD Y
Sbjct: 479 LPTYTIGQQFIPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCY 538
Query: 810 ATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKDCL 637
AT+D + +PT+LG+ALV GY +MGY+L + L ME DM+ + ++RK++VL+ CL
Sbjct: 539 ATKDSDTRFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKSEVLEGCL 598
Query: 636 EQAETSYKEVTENRMALIQAGETFLGKKSNC----------VRRCSTCDESEMVLQTRDG 487
+Q + + + NR+ L +A E F + + VR C +C ES+MVL+ R
Sbjct: 599 QQMKACFLDARLNRVKLFEAMELFFERSNRSGADTNNIGETVRPCDSCHESDMVLKRRPS 658
Query: 486 GNFEVACARAN-CKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYRSM 310
G+F V C R C+ VV LP I A VT +VC C P VF I+FKFR EIP Y
Sbjct: 659 GDFMVGCLRFPLCRNVVWLPGSISEAAVTSEVCPTCAPGPVFLIQFKFRRLEIPPNYDVD 718
Query: 309 HVGCI-VCDRLINQLKNLCGFGRSNGWTR----EDSPSG-------MVYCVKCKQSGHVF 166
H+GCI CD + +L +CG G N R + PS C+ C+++GH
Sbjct: 719 HLGCIGGCDVALRELAEICGTGSRNNTARAQRSTEPPSSTRRGNSRQDSCMYCRRTGHSS 778
Query: 165 SECTQPAM*ISSHDSPDCCVWKT 97
++C P+ SH +P + K+
Sbjct: 779 NDC--PSQVSHSHGAPSIRIQKS 799
>ref|XP_008807898.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Phoenix dactylifera]
Length = 920
Score = 310 bits (795), Expect(2) = e-129
Identities = 201/480 (41%), Positives = 275/480 (57%), Gaps = 8/480 (1%)
Frame = -2
Query: 2413 QIRVLNVAEKPSAARKIVDVLSLEGRNL-VRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
+IRVLNVAEKPS A+ + ++LS G R VFEF ++ +LC M+VTSV
Sbjct: 9 RIRVLNVAEKPSVAKAVAEILSRRGGGFRSREGRSRYNRVFEF-EYAIGPQLCHMLVTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EFDD +F++W+ DP DL+ A +RK V ++TL+E+A C L LWLD
Sbjct: 68 TGHLMELEFDD-RFRKWHSCDPADLYHAAVRKHVPQDKLDIKRTLEEEARSCQWLVLWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV +VC S + V RA+F AL+D +I A QN G N AVD R
Sbjct: 127 CDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDVRQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAFGPLNRSGK----TLKFGTSLLPHLEFITNRYWDRIKHV 1709
E+D +IG S++RF T+L + AF L+ +G L +G P L FI RYW+ H
Sbjct: 187 EIDLRIGASFTRFQTMLLRDAF-VLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245
Query: 1708 PTKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSL 1529
P +FWT+ C+HT+D G T F + R HL A+ + ++ TATV+ N+
Sbjct: 246 PEEFWTINCSHTSDEG-TTTFSWMRGHLFDY--TSAVIVYEMC-VEESTATVMNVRNQE- 300
Query: 1528 RHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLP 1349
+ PP PL+T+EL K AS Y+ MSS TM VAEELY+ ISYPRT SF + TDL
Sbjct: 301 KLKYPPYPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDSFS-VNTDLH 359
Query: 1348 RLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWS 1178
+VG Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS
Sbjct: 360 AIVGEQVGHPAWGSYAQRLL-DPEASLWRN---PSNGGHNDKAHPPIHPTKFSAGEPGWS 415
Query: 1177 TDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
D R+Y +VVR+FLA +S+ ++T + + E A G + +Y D++ F SW
Sbjct: 416 QDHNRLYELVVRHFLACVSKPAVGAETTVEIDIAGEQFSASGRVIIAK-NYLDVYRFESW 474
Score = 183 bits (464), Expect(2) = e-129
Identities = 121/332 (36%), Positives = 171/332 (51%), Gaps = 36/332 (10%)
Frame = -3
Query: 984 IPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG-Y 811
+P Y GQ P L G T L M K G GTD+TMH H++K LD Y
Sbjct: 479 LPTYTIGQQFIPTTLTLDSGVTRPPQLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCY 538
Query: 810 ATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKDCL 637
AT+D + +PT+LG+ALV GY +MGY+L + L ME DM+ + ++RK++VL+ CL
Sbjct: 539 ATKDSDTRFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSIGSKRKSEVLEGCL 598
Query: 636 EQAETSYKEVTENRMALIQAGETFLGKKSNC----------VRRCSTCDESEMVLQTRDG 487
+Q + + + NR+ L +A E F + + VR C +C ES+MVL+ R
Sbjct: 599 QQMKACFLDARLNRVKLFEAMELFFERSNRSGADTNNIGETVRPCDSCHESDMVLKRRPS 658
Query: 486 GNFEVACARAN-CKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYRSM 310
G+F V C R C+ VV LP I A VT +VC C P VF I+FKFR EIP Y
Sbjct: 659 GDFMVGCLRFPLCRNVVWLPGSISEAAVTSEVCPTCAPGPVFLIQFKFRRLEIPPNYDVD 718
Query: 309 HVGCI-VCDRLINQLKNLCGFGRSN--------------------GWTREDSPSGMVYCV 193
H+GCI CD + +L +CG G N G +R+DS C+
Sbjct: 719 HLGCIGGCDVALRELAEICGTGSRNNTGMTARAQRSTEPPSSTRRGNSRQDS------CM 772
Query: 192 KCKQSGHVFSECTQPAM*ISSHDSPDCCVWKT 97
C+++GH ++C P+ SH +P + K+
Sbjct: 773 YCRRTGHSSNDC--PSQVSHSHGAPSIRIQKS 802
>ref|XP_010270299.1| PREDICTED: DNA topoisomerase 3-alpha [Nelumbo nucifera]
Length = 921
Score = 295 bits (755), Expect(2) = e-128
Identities = 188/477 (39%), Positives = 266/477 (55%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
+RVLNVAEKPS A+ + +LS VR +FEF D+ R + C M+ TSV+G
Sbjct: 7 VRVLNVAEKPSVAKAVAGILSRNQGLRVRNGRSRFNRIFEF-DYSIRGQHCHMLFTSVTG 65
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF++ ++++W+ DP DL+ A +RKFV ++TL+E+A +C L LWLD +
Sbjct: 66 HLMELEFEE-RYRKWHSCDPADLYHAPVRKFVPQDKLDIKRTLEEEARKCQWLVLWLDCD 124
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV ++C++A + + RA F AL+D +I + QN N AVD R E+
Sbjct: 125 REGENIAFEVVEICSAANNHLNIWRARFSALIDREIHESVQNLVRPNQLFADAVDARQEI 184
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 185 DLRIGASFTRFQTMLLKDAFVIDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEE 244
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FWT+ C+HT D G I F + R H+ +A+ + + TATV + N+ +
Sbjct: 245 FWTINCSHTLDEG-IATFNWMRGHIFDY--TYAVIIYEMCTL-EPTATVTKVKNQE-KLK 299
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PLNT+EL K AS Y+ MSS TM VAEELY+ ISYPRT F TDL +V
Sbjct: 300 YPPHPLNTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDCFS-ARTDLHAMV 358
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWSTDF 1169
QQ P WG YAQ LL DP L + SN G + PI+PT+Y G GWS D
Sbjct: 359 QEQQGHPLWGSYAQRLL-DPEARLWRS---PSNGGHDDKAHPPIHPTKYSAGESGWSQDH 414
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
R+Y +VVR+FLA +S+ ++ + + E G + +Y D++ F SW
Sbjct: 415 HRLYELVVRHFLACVSQPAIGAETIVEIDIAGEQFSVSGRVIL-QKNYLDVYRFESW 470
Score = 194 bits (493), Expect(2) = e-128
Identities = 123/309 (39%), Positives = 165/309 (53%), Gaps = 31/309 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPI-WALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L+ M K G GTD+TMH H++K LD
Sbjct: 473 SMIPTYSVGQQFIPTALTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 532
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N +PT+LG+ALV GY DMGY+L + L ME DM+ + T+RKA+VL+
Sbjct: 533 CYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKAEVLET 592
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CL+Q + + + N++ L++A F + + + VR CS C ES MVL+
Sbjct: 593 CLQQMKACFLDARLNKVKLLEAMAIFFERCNRPGTNEQQGAVDIVRPCSACQESNMVLKR 652
Query: 495 RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP I TATVT+ +C+ C P VFKI+FKFR EIP Y
Sbjct: 653 KPDGNFMVGCLGFPQCRNVVWLPGSISTATVTNHICDSCSPGPVFKIQFKFRRLEIPSDY 712
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFG---------RSNGWTREDSPSGMV-----YCVKCK 184
H+GCI CD + QL +CG G R G T + + V C C+
Sbjct: 713 DVDHLGCIGGCDETLKQLTEICGTGSRNPPSTSARGRGTTASSTNAQRVSTMQGVCEHCR 772
Query: 183 QSGHVFSEC 157
Q+GH ++C
Sbjct: 773 QTGHSSNDC 781
>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA
topoisomerase, putative, partial [Ricinus communis]
Length = 833
Score = 300 bits (769), Expect(2) = e-127
Identities = 195/481 (40%), Positives = 266/481 (55%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRN--LVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
I VLNVAEKPS A+ + +LS ++ VR ++FEFN + + C M+VTSV
Sbjct: 2 INVLNVAEKPSVAKSVATILSRNQQHGLRVREGQSRYNKIFEFN-YVINGQNCHMLVTSV 60
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EFDD +F++W+ DP DL+ A +RKFV ++TL+E+A C L LWLD
Sbjct: 61 TGHLMELEFDD-RFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLD 119
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV DVC SA +TV RA F AL+D +I AAQN N AVD R
Sbjct: 120 CDREGENIAFEVVDVCRSANRYLTVRRARFSALIDREIHEAAQNLVSPNQWFSDAVDARQ 179
Query: 1876 EVDFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVP 1706
E+D +IG S++RF T+L + F + L +G P L FI RYW+ H
Sbjct: 180 EIDLRIGASFTRFQTLLLRDKFVIDSAQDDRNLVLSYGPCQFPTLGFIVERYWEIQSHES 239
Query: 1705 TKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQ----QQTATVLEPCN 1538
+FWT+ C+HT+ G I F + R HL T+ + Y+ + TATV +
Sbjct: 240 EEFWTINCSHTSVEG-IANFSWMRGHLFD-------YTSAVILYELCVLEPTATVTKVQQ 291
Query: 1537 KSLRHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIAT 1358
K + PP PL+T+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F T
Sbjct: 292 KE-KQKYPPYPLSTIELEKRASRYFHMSSEQTMKVAEDLYQSGFISYPRTETDGFSS-RT 349
Query: 1357 DLPRLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTRYHDG-LGW 1181
DL +V QQ P WG YAQ LL DP L + + + PI+PT++ G GW
Sbjct: 350 DLHTIVRDQQAHPIWGSYAQRLL-DPGTGLWRNPSTGGHDDKAHP-PIHPTKFSPGETGW 407
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D RVY +VVR+FLA +S+ ++T + + E A G + +Y D++ F S
Sbjct: 408 SQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAK-NYLDVYRFES 466
Query: 1000 W 998
W
Sbjct: 467 W 467
Score = 184 bits (467), Expect(2) = e-127
Identities = 114/305 (37%), Positives = 158/305 (51%), Gaps = 27/305 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L M K G GTD+TMH H++K LD
Sbjct: 470 SMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDR 529
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N +PT+LG+ALV GY DMGY+L + NL ME DM+++ + KA+VL+
Sbjct: 530 FYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLET 589
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CL+Q +T + + N++ L++A F + + VR+C C E+ MVL+
Sbjct: 590 CLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRR 649
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GNF V C C+ + LP I ATVT VC +C P V+ I+FKFR+ EIP +
Sbjct: 650 NRDGNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGF 709
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFG----------RSNGWTREDSPSGMVYCVKCKQSGH 172
H+GCI CD + QL ++CG G + + S + CV C Q+GH
Sbjct: 710 SVNHLGCIGGCDDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFATCVHCHQTGH 769
Query: 171 VFSEC 157
+C
Sbjct: 770 ASIDC 774
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha [Cicer arietinum]
Length = 920
Score = 296 bits (758), Expect(2) = e-126
Identities = 183/479 (38%), Positives = 266/479 (55%), Gaps = 8/479 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
+ VLNVAEKPS A+ + ++LS VR +FEFN + R + C M+ TSV G
Sbjct: 6 VTVLNVAEKPSVAKSVANILSRNQGLRVRDGRSRYNRIFEFN-YTIRGQPCHMLFTSVIG 64
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF+D ++++W+ DP DL+ A +RK V ++TL+E+A C L LWLD +
Sbjct: 65 HLMELEFED-RYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLWLDCD 123
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV DVC +A +T+ RA F AL+D +I A QN N AVD R E+
Sbjct: 124 REGENIAFEVVDVCTAANPHLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQEI 183
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 184 DLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQFPTLGFVVERYWEIQAHEPEE 243
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FW++ C+H +D G + F + R HL ++ A ++ + + +
Sbjct: 244 FWSINCSHRSDEG-VANFSWGRGHLF----DYTCAVIIYEMCTEEPTATVTNVRQQEKLK 298
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PL+T+EL K AS Y+ MSS TM VAEELY+ ISYPRT +F TDL +V
Sbjct: 299 YPPHPLSTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDNFSS-RTDLHAIV 357
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDG-LGWST 1175
QQ PQWGVYAQ LL DP + G+ ++ +G D PI+PT++ G GWS
Sbjct: 358 QEQQGHPQWGVYAQRLL-DP-----EAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQ 411
Query: 1174 DFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
D +++Y +VVR+FLA +S+ ++T + + E A G + +Y D++ + SW
Sbjct: 412 DHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGELFSACGRVILEK-NYLDVYQYESW 469
Score = 186 bits (472), Expect(2) = e-126
Identities = 118/306 (38%), Positives = 160/306 (52%), Gaps = 28/306 (9%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L M KEG GTD+TMH H++K LD
Sbjct: 472 SIIPTYTIGQQFIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 531
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D +M TPT+LG+ALV GY DMGYKL + L ME+DM+ + T+ K +VL
Sbjct: 532 FYATKDASMRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDT 591
Query: 642 CLEQAETSYKEVTENRMALIQAGETFL-------GKKSNC----VRRCSTCDESEMVLQT 496
L+Q + + + N++ L++A F G++ N VRRC C ES+MVL+
Sbjct: 592 SLQQMKACFLDARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKK 651
Query: 495 RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GNF V C C+ V LP + A VT C C P V++I+FKFR+ EIP Y
Sbjct: 652 SRDGNFMVGCLGFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNY 711
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFG-----------RSNGWTREDSPSGMVYCVKCKQSG 175
H+GCI CD ++ QL +CG G S G +P V C+ C+++G
Sbjct: 712 DVNHLGCIGGCDEILTQLTEICGTGPRMPARPRGPTTSTGNAHHTNPRQAV-CMNCQETG 770
Query: 174 HVFSEC 157
H ++C
Sbjct: 771 HSSNDC 776
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 293 bits (751), Expect(2) = e-126
Identities = 189/481 (39%), Positives = 266/481 (55%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLE--GRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
IRVLNVAEKPS A+ + +LS G VR ++FEFN + RN+ C M+ TSV
Sbjct: 9 IRVLNVAEKPSVAKAVSGILSKNQPGGMRVRDGRSRYNKIFEFN-YTIRNQPCQMLFTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EFD+ ++++W+ DP+DL+ A +RKFV ++TL+ +A C + LWLD
Sbjct: 68 TGHLMELEFDE-RYRKWHSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQWIVLWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV DVC A + V RA F AL+D +I + Q N AVD R
Sbjct: 127 CDREGENIAFEVLDVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVP 1706
E+D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P
Sbjct: 187 EIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEP 246
Query: 1705 TKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLR 1526
+FWT+ CTH +D G T F + R HL + + Q+ ATV + + +
Sbjct: 247 EEFWTINCTHNSDEGTAT-FNWMRGHLFDYTCGVTIYEMCI---QEPIATVTK-VKQQEK 301
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
PP PL+T+EL K AS Y+ MSS TM VAE+LY+ ISYPRT SF TDL
Sbjct: 302 LKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDSFSE-KTDLRT 360
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDG-LGW 1181
+V Q+ P WG+YAQ LL DP Q G+ ++ G D PI+PT++ G W
Sbjct: 361 MVQEQEGHPVWGIYAQRLL-DP-----QSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRW 414
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D RVY +VVR+FLA +S+ ++ + + E+ A G + +Y D++ F S
Sbjct: 415 SQDHHRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAK-NYLDVYRFES 473
Query: 1000 W 998
W
Sbjct: 474 W 474
Score = 188 bits (478), Expect(2) = e-126
Identities = 120/314 (38%), Positives = 163/314 (51%), Gaps = 32/314 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ TP L G T L M K G GTD+TMH H++K LD
Sbjct: 477 SVIPTYSFGQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDR 536
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YA +D N +PT LG+ALV GY DMGY+L + L ME DM+ + T+RKA+VL+
Sbjct: 537 FYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLET 596
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CL+Q + + + N+ L++A F + + + VRRC C ES+MVL+
Sbjct: 597 CLQQMKACFSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQ 656
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP + A+VT+ C C P VFKI+FKFR EIP Y
Sbjct: 657 KPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNY 716
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFG-RSNGWT--------------REDSPSGMVYCVKC 187
H+GCI CD ++ QL +CG G R+N T + + C C
Sbjct: 717 SVQHLGCIGGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYC 776
Query: 186 KQSGHVFSECTQPA 145
+Q+GH+ ++C A
Sbjct: 777 RQTGHLSNDCPSQA 790
>ref|XP_010907414.1| PREDICTED: DNA topoisomerase 3-alpha [Elaeis guineensis]
Length = 917
Score = 301 bits (770), Expect(2) = e-125
Identities = 196/480 (40%), Positives = 273/480 (56%), Gaps = 8/480 (1%)
Frame = -2
Query: 2413 QIRVLNVAEKPSAARKIVDVLSLEGRNL-VRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
+IRVLNVAEKPS A+ + ++LS G R VFEF ++ +LC M+VTSV
Sbjct: 9 RIRVLNVAEKPSVAKAVSEILSRRGGGFRSREGRSRYNRVFEF-EYAIGPQLCHMLVTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + +FDD +F++W+ DP DL+ A +RK V ++TL+E+A C L LWLD
Sbjct: 68 TGHLMELDFDD-RFRKWHSCDPADLYDAPVRKNVPQDKLDIKRTLEEEARSCQWLVLWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV +VC S + V RA+F AL+D +I A QN G N AVD R
Sbjct: 127 CDREGENIAFEVMEVCTSINHRLNVWRAHFSALIDREIHEAVQNLGRPNKLFADAVDARQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAFGPLNRSGK----TLKFGTSLLPHLEFITNRYWDRIKHV 1709
E+D +IG S++RF T+L + AF L+ +G L +G P L FI RYW+ H
Sbjct: 187 EIDLRIGASFTRFQTMLLRDAF-VLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245
Query: 1708 PTKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSL 1529
P +FWT+ C+HT+D G F + R HL + A ++ TATV+ N+
Sbjct: 246 PEEFWTINCSHTSDEG-TAAFSWMRGHL---FDYTSAVIAYEMCVEEPTATVMTVRNQE- 300
Query: 1528 RHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLP 1349
+ PP PL+T+EL K AS Y+ MS+ TM VAEELY+ ISYPRT +F TDL
Sbjct: 301 KLKYPPYPLSTVELQKRASRYFRMSAEHTMKVAEELYQAGYISYPRTETDNFS-ANTDLH 359
Query: 1348 RLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWS 1178
+VG Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS
Sbjct: 360 AIVGEQVGHPAWGSYAQRLL-DPEARLWRN---PSNGGHDDKAHPPIHPTKFFAGEPGWS 415
Query: 1177 TDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+ R+Y +VVR+FLA +S+ ++T + + E +A G + +Y D++ F SW
Sbjct: 416 QNHNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFFASGRVIIAK-NYLDVYRFESW 474
Score = 180 bits (456), Expect(2) = e-125
Identities = 119/323 (36%), Positives = 166/323 (51%), Gaps = 27/323 (8%)
Frame = -3
Query: 984 IPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG-Y 811
+P Y GQ P L G T L M K G GTD+TMH H++K LD Y
Sbjct: 479 LPTYTIGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCY 538
Query: 810 ATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKDCL 637
AT+D N +PT+LG+ALV GY +MGY+L + L ME DM+ + +RK++VL+ CL
Sbjct: 539 ATKDSNTRFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSLGAKRKSEVLEGCL 598
Query: 636 EQAETSYKEVTENRMALIQAGETFLGKKSNC----------VRRCSTCDESEMVLQTRDG 487
+Q + + + NR+ L++A F + + VR C C ES+MVL+ R
Sbjct: 599 QQMKACFLDARLNRVKLLEAMGLFFERSNRSGADTHNIGETVRSCDLCHESDMVLKRRPN 658
Query: 486 GNFEVACARAN-CKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYRSM 310
G+F V C R C+ VV LP I A V+ QVC C P VF I+FKFR EIP Y
Sbjct: 659 GDFMVGCLRFPLCRNVVWLPGSISEAAVSSQVCPTCAPGPVFLIQFKFRRLEIPPNYDVD 718
Query: 309 HVGCI-VCDRLINQLKNLCGFGRSNGWTR----EDSPSG-------MVYCVKCKQSGHVF 166
H+GCI CD + +L +CG G N R + PS C+ C+++GH
Sbjct: 719 HLGCIGGCDVTLRELAEICGTGSRNNTARGQRSTEPPSSTRRGNSRQDSCMYCRRTGHSS 778
Query: 165 SECTQPAM*ISSHDSPDCCVWKT 97
++C P+ SH + + K+
Sbjct: 779 NDC--PSQVSRSHRAQSIGIQKS 799
>ref|XP_010320982.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Solanum
lycopersicum]
Length = 915
Score = 289 bits (740), Expect(2) = e-125
Identities = 189/481 (39%), Positives = 264/481 (54%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLE--GRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
IRVLNVAEKPS A+ + +LS G VR ++FEFN + RN+ C M+ TSV
Sbjct: 9 IRVLNVAEKPSVAKAVSGILSKNQPGGIRVRDGRSRYNKIFEFN-YTIRNQPCQMLFTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EF + ++++W+ DP+DL+ A IRKFV ++TL+ +A C + LWLD
Sbjct: 68 TGHLMEIEFHE-RYRKWHSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQWIILWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV DVC A +TV RA F AL+D +I + Q N AVD R
Sbjct: 127 CDREGENIAFEVLDVCRQANHNLTVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDVRQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVP 1706
E+D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P
Sbjct: 187 EIDLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEP 246
Query: 1705 TKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLR 1526
+FWT+ CTH +D G T F + R HL + + Q+ ATV + + +
Sbjct: 247 EEFWTINCTHNSDEGTAT-FNWMRGHLFDYTCGVMIYEMCI---QEPIATVTK-VKQQEK 301
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
PP PL+T+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F TDL
Sbjct: 302 LKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSD-KTDLRT 360
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDG-LGW 1181
+V Q+ P WG YAQ LL DP Q G+ ++ G D PI+PT++ G W
Sbjct: 361 MVQEQEGHPVWGTYAQRLL-DP-----QSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRW 414
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D RVY +VVR+FLA +S+ ++ + + E+ A G + +Y D++ F S
Sbjct: 415 SQDHHRVYELVVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAK-NYLDVYRFES 473
Query: 1000 W 998
W
Sbjct: 474 W 474
Score = 191 bits (486), Expect(2) = e-125
Identities = 119/314 (37%), Positives = 161/314 (51%), Gaps = 32/314 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ TP L G L M K G GTD+TMH H++K LD
Sbjct: 477 SVIPTYSFGQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDR 536
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YA +D N +PT LG+ALV GY DMGY+L + L ME DM+ + T T+RKA+VL+
Sbjct: 537 FYAIKDSNTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLET 596
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
CL+Q + + + N+ L++A F + + VRRC C ES+MVL+
Sbjct: 597 CLQQMKACFSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQ 656
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP + A+VT+ C C P VFKI+FKFR+ EIP Y
Sbjct: 657 KPDGNFMVGCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDY 716
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFGRSN---------------GWTREDSPSGMVYCVKC 187
H+GCI CD ++ QL +CG G N + D+ C C
Sbjct: 717 SVQHLGCIGGCDDILRQLVEICGTGSRNSSNPSGRGRGNPTAFSSAQRDNSRAQSSCAYC 776
Query: 186 KQSGHVFSECTQPA 145
+Q+GH+ ++C A
Sbjct: 777 RQTGHLSNDCPSQA 790
>ref|XP_011652135.1| PREDICTED: DNA topoisomerase 3-alpha [Cucumis sativus]
gi|700204227|gb|KGN59360.1| hypothetical protein
Csa_3G813290 [Cucumis sativus]
Length = 924
Score = 283 bits (723), Expect(2) = e-125
Identities = 181/477 (37%), Positives = 264/477 (55%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
I VLNVAEKPS A+ + +LS VR ++FEFN + R + C M+VTSV+G
Sbjct: 7 ITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFN-YAIRGQSCNMIVTSVTG 65
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + F++ ++++W+ DPV LF A + KFV ++TL++++ L LWLD +
Sbjct: 66 HLMELAFEE-RYRKWHSCDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVLWLDCD 124
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VC + + + RA+F AL++ DI A QN N AVD R E+
Sbjct: 125 REGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHDAVQNLVQPNKWFADAVDARQEI 184
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 185 DLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQSHEPEE 244
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGE-YQQQTATVLE-PCNKSLR 1526
FWT+ C+H +D G I+ F ++R G + ++ A Q+ TATV+ ++L+
Sbjct: 245 FWTINCSHNSDDG-ISTFSWTR----GNLFDYTCAVVFYEMCVQESTATVVNVRRQETLK 299
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
+ PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F + TDL
Sbjct: 300 Y--PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQ-RTDLHG 356
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTRYHDG-LGWSTDF 1169
+V QQ WG YAQ LL DP L + + + PI+PT++ G GWS D
Sbjct: 357 IVREQQEHQIWGAYAQRLL-DPESRLWRNPSGGGHDDKAHP-PIHPTKFSAGERGWSQDH 414
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
R+Y +VVR+FLA +S+ +T + + E G + +Y D++ F SW
Sbjct: 415 HRLYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSGRMILAR-NYLDVYRFESW 470
Score = 195 bits (496), Expect(2) = e-125
Identities = 118/304 (38%), Positives = 162/304 (53%), Gaps = 26/304 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y +GQ P L G T L M KEG GTD+TMH H++K LD
Sbjct: 473 STIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 532
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N TPT+LG+ALV GY DMGY L + NL ME +M+ + T+RK +VL
Sbjct: 533 FYATKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLAS 592
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
CL+Q +T + + N+ L++A E F + + V+ C C +S+MVL+
Sbjct: 593 CLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKR 652
Query: 495 RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GN+ V C C+ VV LP I ATVT C C P V+ I+FKFR+ EIP Y
Sbjct: 653 NRDGNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNY 712
Query: 318 RSMHVGCI-VCDRLINQLKNLCGF---------GRSNGWTREDSPSGMVYCVKCKQSGHV 169
+ H+GC+ CD ++ QL +CG G S+ + D+P G C+ C+Q GH
Sbjct: 713 NANHLGCVGGCDDILRQLTEICGTGSRVSARGRGTSSSNVQRDNP-GQSVCIFCQQVGHS 771
Query: 168 FSEC 157
++C
Sbjct: 772 SNDC 775
>gb|AIC82458.1| topoisomerase 3alpha [Cocos nucifera]
Length = 916
Score = 301 bits (770), Expect(2) = e-125
Identities = 194/478 (40%), Positives = 270/478 (56%), Gaps = 6/478 (1%)
Frame = -2
Query: 2413 QIRVLNVAEKPSAARKIVDVLSLEGRNL-VRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
+IRVLNVAEKPS A+ + ++LS G R VFEF ++ LC M+VTSV
Sbjct: 9 RIRVLNVAEKPSVAKAVSEILSRGGGGFRSREGRSRYNRVFEF-EYAIGPHLCHMLVTSV 67
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + +FDD +F++W+ DP DL+ A +RK+V ++TL+E+A C L LWLD
Sbjct: 68 TGHLMELDFDD-RFRKWHSCDPADLYDAPVRKYVPQDKLDIKRTLEEEARSCQWLVLWLD 126
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV +VC S + V RA+F AL++ +I+ A QN G N AVD R
Sbjct: 127 CDREGENIAFEVVEVCTSINHRLNVWRAHFSALIEREIREAVQNLGRPNKLFADAVDVRQ 186
Query: 1876 EVDFKIGCSYSRFNTILFQAAFGPLNRSGK----TLKFGTSLLPHLEFITNRYWDRIKHV 1709
E+D +IG S++RF T+L + AF L+ +G L +G P L FI RYW+ H
Sbjct: 187 EIDLRIGASFTRFQTMLLRDAF-VLDFAGDDRNVVLSYGPCQFPTLGFIVERYWEIQSHE 245
Query: 1708 PTKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSL 1529
P +FWT+ C+HT+D G F + R HL A+ + ++ TATV+ N+
Sbjct: 246 PEEFWTINCSHTSDEG-TAAFSWMRGHLFDY--TSAVIVYEMC-VEEPTATVMNVRNQE- 300
Query: 1528 RHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLP 1349
+ PP PLNT+EL K AS Y+ MSS TM VAEELY+ ISYPRT F TDL
Sbjct: 301 KLKYPPYPLNTVELQKRASRYFRMSSEHTMKVAEELYQAGYISYPRTETDKFSE-NTDLH 359
Query: 1348 RLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTRYHDG-LGWSTD 1172
+VG Q P WG YAQ LL DP L + + + PI+PT++ G WS D
Sbjct: 360 AIVGEQVGHPAWGSYAQRLL-DPEARLWRNPGNGGHDDKAHP-PIHPTKFSAGEPRWSQD 417
Query: 1171 FKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
R+Y +VVR+FLA +S+ ++T + + E A G + +Y D++ F SW
Sbjct: 418 HNRLYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVIIAK-NYLDVYRFESW 474
Score = 177 bits (449), Expect(2) = e-125
Identities = 114/303 (37%), Positives = 155/303 (51%), Gaps = 27/303 (8%)
Frame = -3
Query: 984 IPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG-Y 811
+P Y GQ P L G T L M K G GTD+TMH H++K LD Y
Sbjct: 479 LPTYTIGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRCY 538
Query: 810 ATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKDCL 637
AT+D N +PT+LG+ALV GY +MGY+L + L ME DM+ + T+RK +VL+ CL
Sbjct: 539 ATKDSNTRFSPTNLGEALVMGYDEMGYELWKPFLRSMMECDMKAVSMGTKRKFEVLEGCL 598
Query: 636 EQAETSYKEVTENRMALIQAGETFLGKKSNC----------VRRCSTCDESEMVLQTRDG 487
+Q + + + NR+ L++A F + + VR C C ES+MVL+ R
Sbjct: 599 QQMKACFLDAKLNRVKLLEAMGLFFERSNRSGADPHNVGETVRPCDLCHESDMVLKRRPN 658
Query: 486 GNFEVACARAN-CKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYRSM 310
G+F V C R C+ VV LP I A V+ QVC C P V I+FKFR EIP Y
Sbjct: 659 GDFMVGCLRFPLCRNVVWLPGSISEAAVSSQVCPTCAPGPVSLIQFKFRRLEIPPNYDVD 718
Query: 309 HVGCI-VCDRLINQLKNLCGFGRSNGWTR-----------EDSPSGMVYCVKCKQSGHVF 166
H+GCI CD + +L +CG G N R S C+ C+++GH
Sbjct: 719 HLGCIGGCDVTLRELAEICGTGSRNNTARGQRSTEPPSSTRQGNSRQDSCMYCRRTGHSS 778
Query: 165 SEC 157
++C
Sbjct: 779 NDC 781
>ref|XP_010649355.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Vitis vinifera]
Length = 916
Score = 291 bits (745), Expect(2) = e-125
Identities = 186/477 (38%), Positives = 261/477 (54%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
++VLNVAEKPS A+ + +LS VR ++FEFN + R + C MVVTSV G
Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSRYNKLFEFN-YSIRGQHCQMVVTSVIG 59
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF+D +F++W+ DP L+ A +RKFV ++TL+E+A +C L LWLD +
Sbjct: 60 HLMELEFED-RFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCD 118
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VCA I V RA F AL+D +I + QN N AVD R E+
Sbjct: 119 REGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEI 178
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 179 DLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FWT+ C+H +D G T F + R HL ++ A Q+ + + +
Sbjct: 239 FWTINCSHKSDEGTST-FNWMRAHLF----DYTCAVIIYEMCIQEPTATVTKVRQQEKLK 293
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F TDL +V
Sbjct: 294 YPPHPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSE-RTDLHGIV 352
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWSTDF 1169
Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS D
Sbjct: 353 QEQLGHPIWGSYAQRLL-DPGAGLWRN---PSNGGHDDKAHPPIHPTKFSAGESGWSQDH 408
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+R+Y +VVR+FLA +S+ ++ + + E+ + G + +Y D++ F SW
Sbjct: 409 QRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAK-NYLDVYRFESW 464
Score = 187 bits (474), Expect(2) = e-125
Identities = 114/307 (37%), Positives = 160/307 (52%), Gaps = 29/307 (9%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L+ M K G GTD+TMH H++K LD
Sbjct: 467 SMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 526
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N +PT+LG+ALV GY DMGY+L + L ME DM+ + T+R+ +VL
Sbjct: 527 FYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTT 586
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS--------NCVRRCSTCDESEMVLQTRDG 487
CLEQ + + + N++ L++A F + S + VR+C+ C ES+MVL+ +
Sbjct: 587 CLEQMKACFLDARLNKVKLLEAMALFFERSSGDEQHEVGDVVRQCTLCQESDMVLRRKPD 646
Query: 486 GNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYRSM 310
GNF V C C+ VV LP I A +T C C P V+KI+FKFR EIP Y
Sbjct: 647 GNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNID 706
Query: 309 HVGCIV-CDRLINQLKNLCGFG---------------RSNGWTREDSPSGMVYCVKCKQS 178
H+GC+ CD ++ QL +CG G ++ + S + C+ C Q+
Sbjct: 707 HLGCVCGCDEILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQTACIHCSQT 766
Query: 177 GHVFSEC 157
GH ++C
Sbjct: 767 GHSSNDC 773
>ref|XP_009622049.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Nicotiana
tomentosiformis]
Length = 913
Score = 295 bits (754), Expect(2) = e-125
Identities = 188/481 (39%), Positives = 263/481 (54%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLE--GRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSV 2237
IRVLNVAEKPS A+ + +LS G VR ++FEFN + RN+ C M+ TSV
Sbjct: 11 IRVLNVAEKPSVAKAVSGILSRNQGGGMRVRDGRSRYNKIFEFN-YTIRNQPCQMLFTSV 69
Query: 2236 SGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLD 2057
+GHL + EFDD +F++W+ DP+ L+ A +RK+V ++TL+E+A C + LWLD
Sbjct: 70 TGHLMELEFDD-RFRKWHSCDPLHLYDAPVRKYVPQDKLDIKRTLEEEASRCQWIILWLD 128
Query: 2056 GNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRI 1877
+ EGE IA+EV +VC A + V RA F AL+D +I +AQ N AVD R
Sbjct: 129 CDREGENIAFEVLEVCRQANHNLNVWRARFSALIDREIHQSAQTLVQPNQLFSDAVDVRQ 188
Query: 1876 EVDFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVP 1706
E+D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P
Sbjct: 189 EIDLRIGASFTRFQTMLLRDAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAHEP 248
Query: 1705 TKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLR 1526
+FWT+ CTH D G T F + R HL ++ A Q+ + + +
Sbjct: 249 EEFWTINCTHNFDEGSAT-FNWMRGHLF----DYTCAVTIYEMCIQEPTATVSKVKQQEK 303
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
PP PL+T+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F TDL
Sbjct: 304 LKYPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSE-KTDLRT 362
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDGLG-W 1181
+V Q P WG YAQ LL DP Q G+ ++ G D PI+PT++ G W
Sbjct: 363 MVQEQGGHPVWGSYAQRLL-DP-----QSGLWRNPSGGGHDDKAHPPIHPTKFSAGESRW 416
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D RVY +VVR+FLA +S+ ++T + + E+ +A G + +Y D++ F S
Sbjct: 417 SQDHHRVYELVVRHFLACVSKPAVGAETTVEIDIAGESFFACGRVILAK-NYLDVYRFES 475
Query: 1000 W 998
W
Sbjct: 476 W 476
Score = 183 bits (465), Expect(2) = e-125
Identities = 117/314 (37%), Positives = 161/314 (51%), Gaps = 32/314 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPI-WALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L M K G GTD+TMH H++K LD
Sbjct: 479 SVIPTYTFGQQFIPTSLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDR 538
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YA +D + +PT LG+ALV GY DMGY+L + L ME DM+ + T+RK +VL+
Sbjct: 539 FYAIKDSSTRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSMGTKRKTEVLET 598
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CL+Q + + + N+ L +A F + + + VRRC C ES+MVL+
Sbjct: 599 CLQQMKACFLDARANKGKLFEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQ 658
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP + A+VT+ C C P V+KI+F+FR EIP Y
Sbjct: 659 KPDGNFMVGCLGYPQCRNVVWLPGSLSEASVTENTCTSCGPGPVYKIQFRFRRLEIPPNY 718
Query: 318 RSMHVGCI-VCDRLINQLKNLCG---------FGRSNGWTREDSPS------GMVYCVKC 187
+ H+GCI CD ++ QL +CG FGR G R S + C C
Sbjct: 719 SAQHIGCIGGCDDILRQLVEICGTGSRSSSNTFGRGRGNPRASSSAQRGNSRAQGSCAYC 778
Query: 186 KQSGHVFSECTQPA 145
+Q+GH+ ++C A
Sbjct: 779 RQTGHLSNDCPSQA 792
>ref|XP_014523288.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vigna radiata var.
radiata] gi|951063491|ref|XP_014523289.1| PREDICTED: DNA
topoisomerase 3-alpha isoform X1 [Vigna radiata var.
radiata]
Length = 907
Score = 295 bits (754), Expect(2) = e-125
Identities = 177/475 (37%), Positives = 265/475 (55%), Gaps = 4/475 (0%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
+ VLNVAEKPS A+ + +LS +R ++FEFN + R + C M+ TSV+G
Sbjct: 1 MNVLNVAEKPSVAKSVSTILSRNQGMRMREGRSRYNKIFEFN-YTIRGQPCHMLFTSVTG 59
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EFD+ ++++W+ +P DLF+A + K V ++TL+E+A C L LWLD +
Sbjct: 60 HLMELEFDE-RYRKWHACNPADLFRAPVHKSVPEDKKDIKRTLEEEARRCQWLVLWLDCD 118
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV DVC + +T+ RA F AL++ +I ++ QN + AVD R E+
Sbjct: 119 REGENIAFEVIDVCTAVNPHLTIKRARFSALIEREIHHSVQNLEEPKKCLADAVDARQEI 178
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 179 DLRIGASFTRFQTMLMKDAFVIDTATDGRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEE 238
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FW++ C H +D G+I +F + R HL ++ A ++ + + +
Sbjct: 239 FWSINCAHDSD-GRIAKFSWMRGHLF----DYTCAVIIYEMCVEEPTATVTNVRQQEKLK 293
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PLNT+EL K AS Y+ MSS TM VAEELY+ ISYPRT +F TDL +V
Sbjct: 294 YPPHPLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSS-RTDLHTIV 352
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTRYHDG-LGWSTDFKR 1163
QQ P+WGVYAQ LL DP L + + + PI+PT++ G GWS D ++
Sbjct: 353 QEQQGHPEWGVYAQRLL-DPGTGLWRNPRGGGHDDKAHP-PIHPTKFSTGESGWSQDHRK 410
Query: 1162 VYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+Y +VVR+FLA +S+ ++T +G+ E A G + +Y D++ + SW
Sbjct: 411 LYELVVRHFLACVSKPAVGAETTVEIGIAGELFSACGRVILEK-NYLDVYHYESW 464
Score = 183 bits (465), Expect(2) = e-125
Identities = 117/304 (38%), Positives = 156/304 (51%), Gaps = 26/304 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIWALVP-GTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P ++ G T L M KEG GTD+TMH H++K LD
Sbjct: 467 SLIPTYTIGQQFIPSTLILDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 526
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N TPT+LG+ALV GY DMGYKL + L ME+DM+ + + KADVL
Sbjct: 527 FYATKDANTRFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKFVSEGNKSKADVLAT 586
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC----------VRRCSTCDESEMVLQTR 493
L+ E + + N+ L++A F + S VRRC C ES+MVL+
Sbjct: 587 SLQLMEACFLDARLNKGKLLEAMAIFFERSSRSGNDELHAMGVVRRCGLCQESDMVLRKN 646
Query: 492 DGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIYR 316
GNF V C C+ V LP + A VT C C P V+ I+FKFR+ EIP Y
Sbjct: 647 RDGNFMVGCLGYPQCRNAVWLPGSLSEAVVTTNTCNICTPGPVYLIQFKFRQLEIPPNYS 706
Query: 315 SMHVGCI-VCDRLINQLKNLCGFG-----RSNGWTREDSPSGMVY-----CVKCKQSGHV 169
H+GCI CD +++Q+ +CG G R G T S + CV C+++GH
Sbjct: 707 VNHLGCIGGCDEILSQMTEICGRGSRMPARPRGPTAPPSNAHHTNPRQRPCVNCQETGHS 766
Query: 168 FSEC 157
++C
Sbjct: 767 SNDC 770
>gb|ERM96738.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
Length = 988
Score = 297 bits (760), Expect(2) = e-124
Identities = 197/489 (40%), Positives = 275/489 (56%), Gaps = 6/489 (1%)
Frame = -2
Query: 2446 SLFFTSSCLMAQ-IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFR 2270
SLF S M + IRVLNVAEKPS A+ + +LS +GR VR +V+EF + R
Sbjct: 68 SLFEVSEGPMREGIRVLNVAEKPSVAKAVAGILS-QGRLRVREGRSRYNKVYEF-EHAIR 125
Query: 2269 NRLCTMVVTSVSGHLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKA 2090
+ C M+ TSV+GHL + F + ++K+W+ DP DLF A I+K V ++TL+E+A
Sbjct: 126 GQRCHMLFTSVTGHLMEIVFHE-RYKKWHSCDPADLFSAPIQKHVPQDKLDIKRTLEEEA 184
Query: 2089 VECDELFLWLDGNDEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLN 1910
C L LWLD + EGE IA+EV +VC +A + + RA+F AL+D +I++A QN G N
Sbjct: 185 RTCQWLVLWLDCDREGENIAFEVVEVCTTANRNLDIWRAHFSALIDREIRHAVQNLGRPN 244
Query: 1909 YNVIAAVDYRIEVDFKIGCSYSRFNTILFQAAFGPLNRS----GKTLKFGTSLLPHLEFI 1742
AVD R E+D +IG S++RF T+L + AF LN S + +G P L F+
Sbjct: 245 QLFSDAVDARQEIDLRIGASFTRFQTMLLKNAF-VLNISDDDKNVIVSYGPCQFPTLGFV 303
Query: 1741 TNRYWDRIKHVPTKFWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQT 1562
RYW+ H P +FWT+ C+H D G I F ++R HL + AL + ++ T
Sbjct: 304 VERYWEIQAHEPEEFWTINCSHKTDEG-IATFNWTRGHLFDY--SCALIIYEMC-VEEPT 359
Query: 1561 ATVLEPCNKSLRHVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPA 1382
ATV + ++ R PP PL+TLEL K AS Y+ MSS TM VAE+LY+ ISYPRT
Sbjct: 360 ATVKKVSHQE-RRKYPPHPLSTLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTET 418
Query: 1381 TSFDRIATDLPRLVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTR 1202
SF TDL LV QQ P+WG YAQ LL +P L + PI+PT+
Sbjct: 419 DSFSP-NTDLQALVREQQGHPEWGSYAQRLL---SPEGLWRNPSSGGHDDKAHPPIHPTK 474
Query: 1201 YHDG-LGWSTDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSY 1025
+ G WS D R+Y +VVR+FLA +S+ +T + + E A G + +Y
Sbjct: 475 FSAGESSWSPDHHRLYELVVRHFLACVSQPAIGAGTTVEIDIAGEVFVASGLMIIEK-NY 533
Query: 1024 FDIFPFTSW 998
+++ F SW
Sbjct: 534 LEVYRFESW 542
Score = 179 bits (454), Expect(2) = e-124
Identities = 119/313 (38%), Positives = 157/313 (50%), Gaps = 33/313 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPI-WALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L T L M K G GTD+TMH H++K LD
Sbjct: 545 STIPTYAFGQQFIPTRLTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDR 604
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YA +D N +PT LG+ALV GY MG+ L + NL ME DM+ + + K++VL
Sbjct: 605 FYAIKDSNTRFSPTTLGEALVMGYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLAS 664
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC------------VRRCSTCDESEMVLQ 499
CL+Q + + +V ++ L + F ++SN VR C C ESEMVL+
Sbjct: 665 CLQQMKDCFLDVKSHKAKLFETMGIFF-ERSNTPGGDNLHLAGGKVRSCQQCQESEMVLR 723
Query: 498 TRDGGNFEVACARAN-CKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRI 322
R G+F V C R C+ VV LP I A VT+ VC C P VFKI+FKFR EIP
Sbjct: 724 RRPDGSFMVGCLRFPLCRNVVWLPGAISEALVTEHVCNVCNPEPVFKIQFKFRRMEIPPN 783
Query: 321 YRSMHVGCI-VCDRLINQLKNLCGFG----RSNGWTREDSP-----------SGMVYCVK 190
+ + H+GCI CD + +L +CG G S TR P + V C +
Sbjct: 784 FDTEHLGCIGGCDETLRELIQICGTGPRNLSSGSGTRGRQPTQFSGSAQRRNTSQVVCAR 843
Query: 189 CKQSGHVFSECTQ 151
C+QSGH ++C Q
Sbjct: 844 CRQSGHSSNDCPQ 856
>ref|XP_003602653.2| DNA topoisomerase [Medicago truncatula] gi|657395245|gb|AES72904.2|
DNA topoisomerase [Medicago truncatula]
Length = 956
Score = 295 bits (756), Expect(2) = e-124
Identities = 183/475 (38%), Positives = 264/475 (55%), Gaps = 4/475 (0%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
I VLNVAEKPS A+ + +LS VR +FEFN + R + C M+ TSV G
Sbjct: 6 ITVLNVAEKPSVAKSVASILSRNQGLRVRDGRSRYNRIFEFN-YTIRGQPCQMLFTSVLG 64
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + +FDD ++++W+ DP DLF+A + KFV ++TL+E+A C L LWLD +
Sbjct: 65 HLMELDFDD-RYRKWHSCDPADLFQAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCD 123
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VC +A +T+ RA F AL+D +I A QN N AVD R E+
Sbjct: 124 REGENIAFEVINVCTAANPNLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQEI 183
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG +++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 184 DLRIGATFTRFQTMLMKDAFVIDTVTDGRNTVLSYGPCQFPTLGFVVERYWEIQAHEPEE 243
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FW ++C+H +D G + F + R HL + + ++ TATV + K +
Sbjct: 244 FWLIKCSHRSDEG-VANFSWERGHLFDYTCAVIIYEMCI---EEPTATVTKVTPKE-KPK 298
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PL+T+EL K AS Y+ MSS TM VAEELY+ ISYPRT +F TDL +V
Sbjct: 299 YPPHPLSTIELEKRASRYFRMSSERTMKVAEELYQGGFISYPRTETDNFSS-RTDLHAIV 357
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDLPIYPTRYHDG-LGWSTDFKR 1163
QQ P+WG+YAQ LL DP L + + + PI+PT++ G GWS D ++
Sbjct: 358 QEQQGHPEWGIYAQRLL-DPGAGLWRNPRGGGHDDQAHP-PIHPTKFSAGESGWSQDHRK 415
Query: 1162 VYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+Y +VVR+FLA +S+ ++T + + E A G + +Y DI+ + W
Sbjct: 416 LYELVVRHFLACVSKPALGAETTVEIDIAGERFSACGRVILER-NYLDIYIYDRW 469
Score = 181 bits (458), Expect(2) = e-124
Identities = 117/319 (36%), Positives = 159/319 (49%), Gaps = 41/319 (12%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y G+ P L PG T L M KE GTD+TMH H++K LD
Sbjct: 472 SMIPNYAIGEQFIPTTLTLDPGKTNPPPLLSEADLLSRMDKECIGTDATMHDHIKKLLDR 531
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D NM TPT+LG+ALV GY DMGYKL + +L ME+DM+ + + KA+VL
Sbjct: 532 FYATKDANMCFTPTNLGEALVMGYDDMGYKLWKPDLRAVMERDMKSVSEGNKSKAEVLDT 591
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
L+Q +T + + N++ L++A F + + VRRC C ES+MVL+
Sbjct: 592 SLQQMKTCFLDARLNKVKLLEAMAIFFERLNRVGSDEQNGTGVVVRRCRLCQESDMVLKK 651
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GNF V C + C+ VV LP I A VT C C P V+ I+FKF++ +IP Y
Sbjct: 652 NRDGNFMVGCRSYPQCRSVVWLPGSISEAVVTTNACNNCTPGPVYLIQFKFQQLKIPPSY 711
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFG-----RSNGWTREDS-------------------P 214
H+GCI CD ++ QL +CG G R G T S
Sbjct: 712 NVNHLGCIGGCDEILTQLTEICGTGSRMPARGRGPTASTSNVHHTNPRSTASTSNAHHTN 771
Query: 213 SGMVYCVKCKQSGHVFSEC 157
C C+++GH ++C
Sbjct: 772 PRQAVCSHCQETGHSSNDC 790
>ref|XP_010649354.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Vitis vinifera]
Length = 918
Score = 291 bits (745), Expect(2) = e-124
Identities = 186/477 (38%), Positives = 261/477 (54%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
++VLNVAEKPS A+ + +LS VR ++FEFN + R + C MVVTSV G
Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSRYNKLFEFN-YSIRGQHCQMVVTSVIG 59
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF+D +F++W+ DP L+ A +RKFV ++TL+E+A +C L LWLD +
Sbjct: 60 HLMELEFED-RFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCD 118
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VCA I V RA F AL+D +I + QN N AVD R E+
Sbjct: 119 REGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEI 178
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 179 DLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FWT+ C+H +D G T F + R HL ++ A Q+ + + +
Sbjct: 239 FWTINCSHKSDEGTST-FNWMRAHLF----DYTCAVIIYEMCIQEPTATVTKVRQQEKLK 293
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F TDL +V
Sbjct: 294 YPPHPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSE-RTDLHGIV 352
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWSTDF 1169
Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS D
Sbjct: 353 QEQLGHPIWGSYAQRLL-DPGAGLWRN---PSNGGHDDKAHPPIHPTKFSAGESGWSQDH 408
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+R+Y +VVR+FLA +S+ ++ + + E+ + G + +Y D++ F SW
Sbjct: 409 QRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAK-NYLDVYRFESW 464
Score = 185 bits (469), Expect(2) = e-124
Identities = 113/309 (36%), Positives = 160/309 (51%), Gaps = 31/309 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L+ M K G GTD+TMH H++K LD
Sbjct: 467 SMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 526
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N +PT+LG+ALV GY DMGY+L + L ME DM+ + T+R+ +VL
Sbjct: 527 FYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTT 586
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CLEQ + + + N++ L++A F + + + VR+C+ C ES+MVL+
Sbjct: 587 CLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRR 646
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP I A +T C C P V+KI+FKFR EIP Y
Sbjct: 647 KPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNY 706
Query: 318 RSMHVGCIV-CDRLINQLKNLCGFG--------------RSNGWTREDSPSGMVYCVKCK 184
H+GC+ CD ++ QL +CG G ++ + S + C+ C
Sbjct: 707 NIDHLGCVCGCDEILRQLTEICGTGSRICSTVPARGRGSNASSTNAQRSNTRQTACIHCS 766
Query: 183 QSGHVFSEC 157
Q+GH ++C
Sbjct: 767 QTGHSSNDC 775
>ref|XP_010649353.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Vitis vinifera]
Length = 919
Score = 291 bits (745), Expect(2) = e-124
Identities = 186/477 (38%), Positives = 261/477 (54%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
++VLNVAEKPS A+ + +LS VR ++FEFN + R + C MVVTSV G
Sbjct: 1 MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSRYNKLFEFN-YSIRGQHCQMVVTSVIG 59
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF+D +F++W+ DP L+ A +RKFV ++TL+E+A +C L LWLD +
Sbjct: 60 HLMELEFED-RFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCD 118
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VCA I V RA F AL+D +I + QN N AVD R E+
Sbjct: 119 REGENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEI 178
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 179 DLRIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FWT+ C+H +D G T F + R HL ++ A Q+ + + +
Sbjct: 239 FWTINCSHKSDEGTST-FNWMRAHLF----DYTCAVIIYEMCIQEPTATVTKVRQQEKLK 293
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F TDL +V
Sbjct: 294 YPPHPLNTIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSE-RTDLHGIV 352
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDG-LGWSTDF 1169
Q P WG YAQ LL DP L + SN G + PI+PT++ G GWS D
Sbjct: 353 QEQLGHPIWGSYAQRLL-DPGAGLWRN---PSNGGHDDKAHPPIHPTKFSAGESGWSQDH 408
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
+R+Y +VVR+FLA +S+ ++ + + E+ + G + +Y D++ F SW
Sbjct: 409 QRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAK-NYLDVYRFESW 464
Score = 184 bits (468), Expect(2) = e-124
Identities = 113/310 (36%), Positives = 160/310 (51%), Gaps = 32/310 (10%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L+ M K G GTD+TMH H++K LD
Sbjct: 467 SMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 526
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N +PT+LG+ALV GY DMGY+L + L ME DM+ + T+R+ +VL
Sbjct: 527 FYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTT 586
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 496
CLEQ + + + N++ L++A F + + + VR+C+ C ES+MVL+
Sbjct: 587 CLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRR 646
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
+ GNF V C C+ VV LP I A +T C C P V+KI+FKFR EIP Y
Sbjct: 647 KPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNY 706
Query: 318 RSMHVGCIV-CDRLINQLKNLCGFG---------------RSNGWTREDSPSGMVYCVKC 187
H+GC+ CD ++ QL +CG G ++ + S + C+ C
Sbjct: 707 NIDHLGCVCGCDEILRQLTEICGTGSRICSTVPAARGRGSNASSTNAQRSNTRQTACIHC 766
Query: 186 KQSGHVFSEC 157
Q+GH ++C
Sbjct: 767 SQTGHSSNDC 776
>ref|XP_008443143.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Cucumis melo]
Length = 938
Score = 281 bits (720), Expect(2) = e-124
Identities = 184/481 (38%), Positives = 266/481 (55%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
I VLNVAEKPS A+ + +LS VR ++FEFN + R + C M+VTSV+G
Sbjct: 7 ITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFN-YAIRGQSCNMIVTSVTG 65
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + F++ ++++W DPV LF A + KFV ++TL+++A L LWLD +
Sbjct: 66 HLMELAFEE-RYRKWYSCDPVQLFHAPVHKFVPEDKLDIKRTLEQEARRSQWLVLWLDCD 124
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VC + + + RA+F AL++ DI A QN N AVD R E+
Sbjct: 125 REGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHEAVQNLVQPNKWFADAVDARQEI 184
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 185 DLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEPEE 244
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGE-YQQQTATVLE-PCNKSLR 1526
FWT+ C+H +D G I+ F ++R G + ++ A Q+ TATV+ ++L+
Sbjct: 245 FWTINCSHNSDDG-ISTFSWTR----GNLFDYTCAVVFYEMCVQESTATVVNVRRQETLK 299
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
+ PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F + TDL
Sbjct: 300 Y--PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQ-RTDLHG 356
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDG-LGW 1181
+V QQ WG YAQ LL DP + G+ ++ G D PI+PT++ G GW
Sbjct: 357 IVREQQEHQIWGAYAQRLL-DP-----ESGLWRNPSGGGHDDKAHPPIHPTKFSAGERGW 410
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D R+Y +VVR+FLA +S+ +T + + E G + +Y D++ F S
Sbjct: 411 SQDHHRLYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSGRMILAR-NYLDVYRFES 469
Query: 1000 W 998
W
Sbjct: 470 W 470
Score = 194 bits (492), Expect(2) = e-124
Identities = 118/304 (38%), Positives = 161/304 (52%), Gaps = 26/304 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y +GQ P L G T L M KEG GTD+TMH H++K LD
Sbjct: 473 STIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 532
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N TPT LG+ALV GY DMGY L + +L ME +M+ + T+RK +VL
Sbjct: 533 FYATKDANTRFTPTSLGEALVMGYDDMGYNLWKPHLRAIMEHEMKAVSEGTKRKDEVLAS 592
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
CL+Q + + + N+ L++A E F + + V+ C C ES+MVL+
Sbjct: 593 CLQQMKNCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQESDMVLKR 652
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GN+ V C A C+ VV LP I ATVT C C P V+ I+FKFR+ EIP Y
Sbjct: 653 NRDGNYMVGCLAFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNY 712
Query: 318 RSMHVGCI-VCDRLINQLKNLCGF---------GRSNGWTREDSPSGMVYCVKCKQSGHV 169
+ H+GC+ CD ++ QL +CG G S+ + D+P G C+ C+Q GH
Sbjct: 713 NANHLGCVGGCDDILRQLTEICGTGSRVSARGRGTSSSNVQRDNP-GQSVCIFCQQVGHS 771
Query: 168 FSEC 157
++C
Sbjct: 772 SNDC 775
>ref|XP_008443145.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Cucumis melo]
Length = 922
Score = 281 bits (720), Expect(2) = e-124
Identities = 184/481 (38%), Positives = 266/481 (55%), Gaps = 10/481 (2%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
I VLNVAEKPS A+ + +LS VR ++FEFN + R + C M+VTSV+G
Sbjct: 7 ITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFN-YAIRGQSCNMIVTSVTG 65
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + F++ ++++W DPV LF A + KFV ++TL+++A L LWLD +
Sbjct: 66 HLMELAFEE-RYRKWYSCDPVQLFHAPVHKFVPEDKLDIKRTLEQEARRSQWLVLWLDCD 124
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VC + + + RA+F AL++ DI A QN N AVD R E+
Sbjct: 125 REGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHEAVQNLVQPNKWFADAVDARQEI 184
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + AF + L +G P L F+ RYW+ H P +
Sbjct: 185 DLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQAHEPEE 244
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGE-YQQQTATVLE-PCNKSLR 1526
FWT+ C+H +D G I+ F ++R G + ++ A Q+ TATV+ ++L+
Sbjct: 245 FWTINCSHNSDDG-ISTFSWTR----GNLFDYTCAVVFYEMCVQESTATVVNVRRQETLK 299
Query: 1525 HVEPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPR 1346
+ PP PLNT+EL K AS Y+ MSS TM VAE+LY+ ISYPRT F + TDL
Sbjct: 300 Y--PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQ-RTDLHG 356
Query: 1345 LVGAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVED----LPIYPTRYHDG-LGW 1181
+V QQ WG YAQ LL DP + G+ ++ G D PI+PT++ G GW
Sbjct: 357 IVREQQEHQIWGAYAQRLL-DP-----ESGLWRNPSGGGHDDKAHPPIHPTKFSAGERGW 410
Query: 1180 STDFKRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTS 1001
S D R+Y +VVR+FLA +S+ +T + + E G + +Y D++ F S
Sbjct: 411 SQDHHRLYELVVRHFLACVSQPAVGAVTTVEIDIAGELFSTSGRMILAR-NYLDVYRFES 469
Query: 1000 W 998
W
Sbjct: 470 W 470
Score = 194 bits (492), Expect(2) = e-124
Identities = 118/304 (38%), Positives = 161/304 (52%), Gaps = 26/304 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y +GQ P L G T L M KEG GTD+TMH H++K LD
Sbjct: 473 STIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 532
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
YAT+D N TPT LG+ALV GY DMGY L + +L ME +M+ + T+RK +VL
Sbjct: 533 FYATKDANTRFTPTSLGEALVMGYDDMGYNLWKPHLRAIMEHEMKAVSEGTKRKDEVLAS 592
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
CL+Q + + + N+ L++A E F + + V+ C C ES+MVL+
Sbjct: 593 CLQQMKNCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQESDMVLKR 652
Query: 495 RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GN+ V C A C+ VV LP I ATVT C C P V+ I+FKFR+ EIP Y
Sbjct: 653 NRDGNYMVGCLAFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNY 712
Query: 318 RSMHVGCI-VCDRLINQLKNLCGF---------GRSNGWTREDSPSGMVYCVKCKQSGHV 169
+ H+GC+ CD ++ QL +CG G S+ + D+P G C+ C+Q GH
Sbjct: 713 NANHLGCVGGCDDILRQLTEICGTGSRVSARGRGTSSSNVQRDNP-GQSVCIFCQQVGHS 771
Query: 168 FSEC 157
++C
Sbjct: 772 SNDC 775
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 295 bits (756), Expect(2) = e-124
Identities = 187/477 (39%), Positives = 264/477 (55%), Gaps = 6/477 (1%)
Frame = -2
Query: 2410 IRVLNVAEKPSAARKIVDVLSLEGRNLVRTVNQHGVEVFEFNDFPFRNRLCTMVVTSVSG 2231
I+VLNVAEKPS A+ + +LS + VR ++FEFN + + C M+VTSV+G
Sbjct: 2 IKVLNVAEKPSVAKSVATILS-RNQLRVRDGRSRYNKIFEFN-YSINGQQCHMLVTSVTG 59
Query: 2230 HLYQTEFDDSKFKRWNLHDPVDLFKAKIRKFVLPKNDKYEKTLKEKAVECDELFLWLDGN 2051
HL + EF+D +F++W+ DP DL+ A +RK+V ++TL+E+A C L LWLD +
Sbjct: 60 HLMEVEFED-RFRKWHSCDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCD 118
Query: 2050 DEGEYIAWEVADVCASAKLGITVHRANFKALVDEDIKYAAQNPGVLNYNVIAAVDYRIEV 1871
EGE IA+EV +VC +T+ RA F AL++ DI AAQN N AVD R E+
Sbjct: 119 REGENIAFEVMEVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQEI 178
Query: 1870 DFKIGCSYSRFNTILFQAAF---GPLNRSGKTLKFGTSLLPHLEFITNRYWDRIKHVPTK 1700
D +IG S++RF T+L + F + L +G P L F+ RYW+ H P +
Sbjct: 179 DLRIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEE 238
Query: 1699 FWTLECTHTNDRGKITRFEYSRVHLHGRMPNHALATARLGEYQQQTATVLEPCNKSLRHV 1520
FWT+ CTH +D G + F + R HL + L + ++ TATV ++ +
Sbjct: 239 FWTINCTHRSDEG-LASFNWMRGHLFDYTSSVILYEMCV---EEPTATVSNRNHQQEKLK 294
Query: 1519 EPPSPLNTLELLKCASDYYGMSSALTMDVAEELYKLDVISYPRTPATSFDRIATDLPRLV 1340
PP PL+T+EL K AS Y+ MSS TM VAE+LY+ ISYPRT SF TDL +V
Sbjct: 295 YPPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSS-RTDLHTIV 353
Query: 1339 GAQQWDPQWGVYAQNLLADPTPMLLQGGVPQSNQGEVEDL--PIYPTRYHDGLG-WSTDF 1169
Q P WG YAQ LL DP L + SN G + PI+PT++ G WS D
Sbjct: 354 QEHQEHPVWGSYAQRLL-DPGAGLWRN---PSNGGHDDKAHPPIHPTKFSAGESRWSQDH 409
Query: 1168 KRVYGIVVRYFLASLSRTVWIRQSTAVLGMTNETLYARGEEVRGYFSYFDIFPFTSW 998
R+Y +VVR+FLA +S+ ++ + + E A G + +Y D++ F SW
Sbjct: 410 HRLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAK-NYLDVYRFESW 465
Score = 180 bits (456), Expect(2) = e-124
Identities = 113/305 (37%), Positives = 156/305 (51%), Gaps = 27/305 (8%)
Frame = -3
Query: 990 SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 814
S IP Y GQ P L G T L M K G GTD+TMH H++K LD
Sbjct: 468 SMIPTYLQGQQFIPATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDR 527
Query: 813 -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 643
Y T+D N +PT+LG+ALV GY DMGY+L + NL ME DM+++ + KA+VL
Sbjct: 528 FYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLAT 587
Query: 642 CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 496
CL+Q + + + N++ L++A F + VR C C E+ MVL+
Sbjct: 588 CLQQMKACFLDAKVNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKK 647
Query: 495 RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 319
GNF V C+ C+ V LP + AT+T+ +C C P V+ I+FKFR+ EIP +
Sbjct: 648 NRDGNFMVGCSGFPQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGF 707
Query: 318 RSMHVGCI-VCDRLINQLKNLCGFGR----SNG--WTREDSP----SGMVYCVKCKQSGH 172
H+GCI CD + QL +CG G NG T +P S C+ C Q+GH
Sbjct: 708 NVNHLGCIGGCDETLRQLIEICGTGSRVQGGNGPPTTTPSNPQRSNSRQAPCIYCYQTGH 767
Query: 171 VFSEC 157
++C
Sbjct: 768 ASTDC 772