BLASTX nr result

ID: Papaver31_contig00032773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00032773
         (555 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II tra...    40   3e-06
ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prun...    40   3e-06
ref|XP_014496410.1| PREDICTED: mediator of RNA polymerase II tra...    40   8e-06
gb|KOM39107.1| hypothetical protein LR48_Vigan03g248900 [Vigna a...    40   8e-06

>ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
           [Prunus mume]
          Length = 409

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 462 LLIMCCSKCKRLLRMDKISAIILPPVKRSY 551
           L    CSKC RLL MD+ SA++LPPV R Y
Sbjct: 353 LFTKVCSKCGRLLSMDRQSALLLPPVYRPY 382



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 23/67 (34%), Positives = 26/67 (38%)
 Frame = +2

Query: 173 LQEHAARASQVFLGTRPDSXXXXXXXXXXXXXXXXXXXHQSVLIPLTL*YPFQHWICSYQ 352
           + EHAA A Q F+G R +                            T  Y   HWICSYQ
Sbjct: 320 ITEHAAMALQYFIGVRAE----------------------------TALYTLLHWICSYQ 351

Query: 353 TLFTSPC 373
           TLFT  C
Sbjct: 352 TLFTKVC 358


>ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prunus persica]
           gi|462397702|gb|EMJ03370.1| hypothetical protein
           PRUPE_ppa006482mg [Prunus persica]
          Length = 409

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 462 LLIMCCSKCKRLLRMDKISAIILPPVKRSY 551
           L    CSKC RLL MD+ SA++LPPV R Y
Sbjct: 353 LFTKVCSKCGRLLSMDRQSALLLPPVYRPY 382



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 23/67 (34%), Positives = 26/67 (38%)
 Frame = +2

Query: 173 LQEHAARASQVFLGTRPDSXXXXXXXXXXXXXXXXXXXHQSVLIPLTL*YPFQHWICSYQ 352
           + EHAA A Q F+G R +                            T  Y   HWICSYQ
Sbjct: 320 ITEHAAMALQYFIGVRAE----------------------------TALYTLLHWICSYQ 351

Query: 353 TLFTSPC 373
           TLFT  C
Sbjct: 352 TLFTKVC 358


>ref|XP_014496410.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
           [Vigna radiata var. radiata]
          Length = 418

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +3

Query: 477 CSKCKRLLRMDKISAIILPPVKRSY 551
           CSKC RLL MDK S ++LPPV R Y
Sbjct: 362 CSKCSRLLAMDKKSTLLLPPVHRPY 386



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 320 YPFQHWICSYQTLFTSPC 373
           Y   HWICSYQTLF+ PC
Sbjct: 345 YCLLHWICSYQTLFSKPC 362


>gb|KOM39107.1| hypothetical protein LR48_Vigan03g248900 [Vigna angularis]
          Length = 418

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +3

Query: 477 CSKCKRLLRMDKISAIILPPVKRSY 551
           CSKC RLL MDK S ++LPPV R Y
Sbjct: 362 CSKCSRLLAMDKKSTLLLPPVHRPY 386



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 320 YPFQHWICSYQTLFTSPC 373
           Y   HWICSYQTLF+ PC
Sbjct: 345 YCLLHWICSYQTLFSKPC 362