BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00031235
         (2981 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     72   4e-09
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    68   4e-08
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    62   4e-06

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 71.6 bits (174), Expect = 4e-09
 Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
 Frame = -2

Query: 646 KLHNL--GNTPSNKIFIKSILHDMRMEENTPVMDHISSFDSLISKFKAVGENLNDQDK-- 479
           KL NL    T +NK+++K  L+ + M+E T  + H++  + LI++   +G  + ++DK  
Sbjct: 88  KLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRI 147

Query: 478 ----DLSESYKTLSQNFM-SRSSFTIFKVYNVLVAEEMMRKRDRVNNIYENAFVADEK-- 320
                L  SY TLS   +  + S  +  V + L+  E MRK+   +      F+ + +  
Sbjct: 148 VLLNSLPSSYDTLSTTILHGKDSIQLKDVTSALLLNEKMRKKPENHG---QVFITESRGR 204

Query: 319 ---RVSSN------KGKLTV----FICDC*KCAQPGHCARDFPRKEEGFGKVSTNFPEDT 179
              R SSN      +GK  V       +C  C QPGH  RD P  + G G+ S    +D 
Sbjct: 205 SYQRSSSNYGRSGARGKSKVRSKSKARNCYNCDQPGHFKRDCPNPKRGKGESSGQKNDDN 264

Query: 178 VALAMLSED-----CDRDEVILTYANPKSQGGWVLDYGVIVH 68
            A  + + D      + +E  +  A  +S+  WV+D     H
Sbjct: 265 TAAMVQNNDDVVLLINEEEECMHLAGTESE--WVVDTAASYH 304


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 68.2 bits (165), Expect = 4e-08
 Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
 Frame = -2

Query: 634 LGNTPSNKIFIKSILHDMRMEENTPVMDHISSFDSLISKFKAVGENLNDQDK------DL 473
           +  T +NK+++K  L+ + M E T  + H++ F+ LI++   +G  + ++DK       L
Sbjct: 93  MSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSL 152

Query: 472 SESYKTLSQNFM-SRSSFTIFKVYNVLVAEEMMRKR-----------------DRVNNIY 347
             SY  L+   +  +++  +  V + L+  E MRK+                  R +N Y
Sbjct: 153 PSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNY 212

Query: 346 ENAFVADEKRVSSNKGKLTVFICDC*KCAQPGHCARDFPRKEEGFGKVSTNFPEDTVALA 167
             +    +   S N+ K  V   +C  C QPGH  RD P   +G G+ S    +D  A  
Sbjct: 213 GRSGARGK---SKNRSKSRVR--NCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAM 267

Query: 166 MLSED-----CDRDEVILTYANPKSQGGWVLDYGVIVH 68
           + + D      + +E  +  + P+S+  WV+D     H
Sbjct: 268 VQNNDNVVLFINEEEECMHLSGPESE--WVVDTAASHH 303


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 337

 Score = 61.6 bits (148), Expect = 4e-06
 Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
 Frame = -2

Query: 646 KLHNLGNTPS--NKIFIKSILHDMRMEENTPVMDHISSFDSLISKFKAVGENLNDQDK-- 479
           KL +L  T S  NK+++K  LH ++MEE + + +H+S F   +   K+V   ++++D+  
Sbjct: 86  KLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVSLFTKAVLDLKSVDVRIDEEDQAV 145

Query: 478 ----DLSESYKTLSQNFM-SRSSFTIFKVYNVLVAEEMMRK--RDRVNNIYENAFVAD-- 326
                L  S++ L    +  R + T+ +V   L + E+ +K   ++       A +A   
Sbjct: 146 MLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSRELKKKITENKGEGGDPEALMARGR 205

Query: 325 -EKRVSSNKGKLTVFICD---C*KCAQPGHCARDFP-RKEEGFGKVSTNFPEDTVALAML 161
            EKR S +K K      +   C  C + GH  ++ P RK++  GK +     D   +A++
Sbjct: 206 LEKRDSKSKNKRRSKYKNEKACYYCKKEGHFRKECPERKKKNNGKYN-----DESDIAVV 260

Query: 160 SEDCDRDEVILTYANPKSQGGWVLDYGVIVHV 65
           ++  +  EV L+ +  K    W+LD G   H+
Sbjct: 261 ADGYESAEV-LSISTKKHSEEWILDSGCSFHM 291