BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00029846
         (1620 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated prot...   443   e-121
ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated prot...   437   e-119
ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated prot...   436   e-119
ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated prot...   436   e-119
ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated prot...   434   e-119
ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated prot...   434   e-118
ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated prot...   433   e-118
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   432   e-118
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   432   e-118
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot...   431   e-118
gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   429   e-117
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr...   423   e-115
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   421   e-114
ref|XP_007205290.1| hypothetical protein PRUPE_ppa006661mg [Prun...   421   e-114
ref|XP_009373289.1| PREDICTED: RNA polymerase II-associated prot...   415   e-113
gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   415   e-113
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...   415   e-113
ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfam...   414   e-112
ref|XP_009611912.1| PREDICTED: RNA polymerase II-associated prot...   413   e-112
ref|XP_008388474.1| PREDICTED: RNA polymerase II-associated prot...   412   e-112

>ref|XP_008246007.1| PREDICTED: RNA polymerase II-associated protein 3 [Prunus mume]
          Length = 411

 Score =  443 bits (1139), Expect = e-121
 Identities = 236/412 (57%), Positives = 286/412 (69%), Gaps = 1/412 (0%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR PNKH RDQ LDFQG LSDLQ W           + Q         R   TS+  + 
Sbjct: 1    MARAPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQDSHQEKLKTRDLGTSSGNYD 60

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I  +S+S   ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNLDSINTMSSSFTSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANRAMAY++IK F EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIED+EFALRL
Sbjct: 121  ANRAMAYIKIKSFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRL 180

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+ + K LY+K +L+K S  A ++S QE ++VG  + +     +    S A
Sbjct: 181  EPQNQEIKKQYTEAKSLYEKTILQKTS-GARKNSVQEMQKVGKLDTKVNGQSIQPVSSSA 239

Query: 801  GSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQFEVSWK 622
                 TA       N +++ Q    S           V A AA+ ++PP +AYQFEVSW+
Sbjct: 240  QITEMTAVQDHTKRNNTTRKQEVKASVQELASRAASRVKAVAAEKITPPNSAYQFEVSWR 299

Query: 621  GLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVNFLDNLT 442
            GL+GD A Q + LKAISP+ LPQ+FKNAL+ PIL+DIIKCVAT F+EE +LAVN+L+NLT
Sbjct: 300  GLAGDNAGQTSLLKAISPSALPQIFKNALTVPILLDIIKCVATFFIEEIDLAVNYLENLT 359

Query: 441  KVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYCPVR 289
            +V RFD +IM LS++D  DL K+W+EVF N  T  EY+E L  L +KYCP R
Sbjct: 360  RVPRFDTLIMFLSSSDNADLVKIWDEVFDNEATPIEYAEKLDNLHTKYCPKR 411


>ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Pyrus x
            bretschneideri]
          Length = 412

 Score =  437 bits (1124), Expect = e-119
 Identities = 245/415 (59%), Positives = 290/415 (69%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MA  PNKH RDQ LDFQG LSDLQ W           + Q         R S TS+  + 
Sbjct: 1    MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKLKTRDSGTSSENYD 60

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MA ++IKRF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 121  ANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 180

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGK---- 814
            EP NQE+K+Q+ + K LY K  L+KAS  A ++S QE ++ G ++     TKV GK    
Sbjct: 181  EPHNQEIKRQYTEAKSLYDKSNLQKAS-GALKNSVQEMQKRGKSD-----TKVNGKGIQP 234

Query: 813  -PSDAGSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAA-KNLSPPKTAYQ 640
              S A     TA      G+ ++K Q    S               AA KN++PP TAYQ
Sbjct: 235  VSSKAQITEITAVQDHDKGDNTNKKQEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 294

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDIIKCVAT F+EE ELAVN
Sbjct: 295  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIIKCVATFFVEEMELAVN 354

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 355  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNDATPIEYAEKLGNLRAKYC 409


>ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Pyrus x
            bretschneideri]
          Length = 411

 Score =  436 bits (1121), Expect = e-119
 Identities = 246/415 (59%), Positives = 292/415 (70%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MA  PNKH RDQ LDFQG LSDLQ W           + Q  S  +   R S TS+  + 
Sbjct: 1    MASPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQV-SQQEKLTRDSGTSSENYD 59

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 60   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 119

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MA ++IKRF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 120  ANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 179

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGK---- 814
            EP NQE+K+Q+ + K LY K  L+KAS  A ++S QE ++ G ++     TKV GK    
Sbjct: 180  EPHNQEIKRQYTEAKSLYDKSNLQKAS-GALKNSVQEMQKRGKSD-----TKVNGKGIQP 233

Query: 813  -PSDAGSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAA-KNLSPPKTAYQ 640
              S A     TA      G+ ++K Q    S               AA KN++PP TAYQ
Sbjct: 234  VSSKAQITEITAVQDHDKGDNTNKKQEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 293

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDIIKCVAT F+EE ELAVN
Sbjct: 294  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIIKCVATFFVEEMELAVN 353

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 354  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNDATPIEYAEKLGNLRAKYC 408


>ref|XP_010267984.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Nelumbo
            nucifera]
          Length = 484

 Score =  436 bits (1120), Expect = e-119
 Identities = 249/480 (51%), Positives = 300/480 (62%), Gaps = 71/480 (14%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQ-------------------- 1402
            MARVP K++RD+ ++FQG L+DLQ W           +AQ                    
Sbjct: 1    MARVPKKNSRDEGMNFQGFLNDLQDWELSLKEKDKKLRAQTSEETKALPTQRVGMKNASQ 60

Query: 1401 -SHSPGDNGK-------------------------RVSMTSANQFGYSRNSDPITRISNS 1300
             S  PG  G+                           S  S  +F +SRN D + ++S+S
Sbjct: 61   LSSEPGIGGRGRQLKEQNTAAVGRDKGPGGESPSVHYSRNSKYRFDFSRNFDAVNKLSSS 120

Query: 1299 LLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKRFE 1120
             L+ E+SPDA SEKELGNEYFKQKKFNEAIDCYSRSIAL P+AVAYANRAMAYL+IKRFE
Sbjct: 121  YLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSIALMPTAVAYANRAMAYLKIKRFE 180

Query: 1119 EAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPDNQEVKKQHADV 940
            EAE+DCTEALNLDDRYIKAYSRRATARKELGKLK +IED+EFALRLEP+NQE+KKQ+A+ 
Sbjct: 181  EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAIEDAEFALRLEPNNQELKKQYAES 240

Query: 939  KDLYKKEVLKKASAAA----------------ARDSTQEAKRVGVTEIQTGRTKVGG--- 817
            K LY KE+LKKAS  A                  D    +K   + +    +T VGG   
Sbjct: 241  KALYDKEILKKASGIARNAIQGETAAQVDRMKGTDGKFPSKPSIIVQEIKSKTTVGGTRS 300

Query: 816  --KPSDAGSGSKTARISV---ASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPK 652
              K SD      T + S       +   K +    S             AEA KN++PPK
Sbjct: 301  WIKESDGSQEDATLKSSADTFKGSHAVDKREELKTSVQELASRAASRAMAEAVKNITPPK 360

Query: 651  TAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETE 472
            +AY+FEVSW+GLSGD ALQA  LK ISP TLPQLFKNALSA IL+D++ C+AT  MEET+
Sbjct: 361  SAYEFEVSWRGLSGDRALQARLLKVISPPTLPQLFKNALSAQILVDVVSCIATFIMEETD 420

Query: 471  LAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYCP 295
            LAV+FLDNLTK+SRF MIIMCLSA ++ DL K+W+EVFS+     EY ETLS+LR KY P
Sbjct: 421  LAVSFLDNLTKISRFSMIIMCLSALERDDLRKIWDEVFSHEGMGVEYRETLSRLRPKYIP 480


>ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Malus
            domestica]
          Length = 412

 Score =  434 bits (1117), Expect = e-119
 Identities = 240/415 (57%), Positives = 284/415 (68%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR PNKH RDQ LDFQG LSDLQ W           + Q         R S TS+  + 
Sbjct: 1    MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXLKTRDSGTSSGNYD 60

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 61   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 120

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MAY++I+RF+EAE+DCT ALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 121  ANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 180

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+ + K LY K  L+KAS  A ++S QE ++ G  +     TKV GK    
Sbjct: 181  EPHNQEIKKQYTEAKSLYDKSNLEKAS-GALKNSVQEXQKRGKLD-----TKVNGKGIQP 234

Query: 801  GSGS------KTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQ 640
             S S         +      N + K +                    A KN++PP TAYQ
Sbjct: 235  VSXSAQITEITXVQDHTKGDNTNKKLEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 294

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDII CVAT F+EE ELAVN
Sbjct: 295  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIINCVATFFVEEMELAVN 354

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 355  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNEATPIEYAEKLGNLRAKYC 409


>ref|XP_010267983.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Nelumbo
            nucifera]
          Length = 489

 Score =  434 bits (1115), Expect = e-118
 Identities = 249/485 (51%), Positives = 300/485 (61%), Gaps = 76/485 (15%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQ-------------------- 1402
            MARVP K++RD+ ++FQG L+DLQ W           +AQ                    
Sbjct: 1    MARVPKKNSRDEGMNFQGFLNDLQDWELSLKEKDKKLRAQTSEETKALPTQRVGMKNASQ 60

Query: 1401 -SHSPGDNGK------------------------------RVSMTSANQFGYSRNSDPIT 1315
             S  PG  G+                                S  S  +F +SRN D + 
Sbjct: 61   LSSEPGIGGRGRQLKEQVFSPQNTAAVGRDKGPGGESPSVHYSRNSKYRFDFSRNFDAVN 120

Query: 1314 RISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLR 1135
            ++S+S L+ E+SPDA SEKELGNEYFKQKKFNEAIDCYSRSIAL P+AVAYANRAMAYL+
Sbjct: 121  KLSSSYLNAEDSPDATSEKELGNEYFKQKKFNEAIDCYSRSIALMPTAVAYANRAMAYLK 180

Query: 1134 IKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPDNQEVKK 955
            IKRFEEAE+DCTEALNLDDRYIKAYSRRATARKELGKLK +IED+EFALRLEP+NQE+KK
Sbjct: 181  IKRFEEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKAAIEDAEFALRLEPNNQELKK 240

Query: 954  QHADVKDLYKKEVLKKASAAA----------------ARDSTQEAKRVGVTEIQTGRTKV 823
            Q+A+ K LY KE+LKKAS  A                  D    +K   + +    +T V
Sbjct: 241  QYAESKALYDKEILKKASGIARNAIQGETAAQVDRMKGTDGKFPSKPSIIVQEIKSKTTV 300

Query: 822  GG-----KPSDAGSGSKTARISV---ASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKN 667
            GG     K SD      T + S       +   K +    S             AEA KN
Sbjct: 301  GGTRSWIKESDGSQEDATLKSSADTFKGSHAVDKREELKTSVQELASRAASRAMAEAVKN 360

Query: 666  LSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLF 487
            ++PPK+AY+FEVSW+GLSGD ALQA  LK ISP TLPQLFKNALSA IL+D++ C+AT  
Sbjct: 361  ITPPKSAYEFEVSWRGLSGDRALQARLLKVISPPTLPQLFKNALSAQILVDVVSCIATFI 420

Query: 486  MEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLR 310
            MEET+LAV+FLDNLTK+SRF MIIMCLSA ++ DL K+W+EVFS+     EY ETLS+LR
Sbjct: 421  MEETDLAVSFLDNLTKISRFSMIIMCLSALERDDLRKIWDEVFSHEGMGVEYRETLSRLR 480

Query: 309  SKYCP 295
             KY P
Sbjct: 481  PKYIP 485


>ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Malus
            domestica]
          Length = 411

 Score =  433 bits (1113), Expect = e-118
 Identities = 241/415 (58%), Positives = 286/415 (68%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR PNKH RDQ LDFQG LSDLQ W           + Q  S  +   R S TS+  + 
Sbjct: 1    MARPPNKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQV-SQQEXLTRDSGTSSGNYD 59

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 60   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 119

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MAY++I+RF+EAE+DCT ALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 120  ANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 179

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+ + K LY K  L+KAS  A ++S QE ++ G  +     TKV GK    
Sbjct: 180  EPHNQEIKKQYTEAKSLYDKSNLEKAS-GALKNSVQEXQKRGKLD-----TKVNGKGIQP 233

Query: 801  GSGS------KTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQ 640
             S S         +      N + K +                    A KN++PP TAYQ
Sbjct: 234  VSXSAQITEITXVQDHTKGDNTNKKLEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 293

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDII CVAT F+EE ELAVN
Sbjct: 294  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIINCVATFFVEEMELAVN 353

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 354  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNEATPIEYAEKLGNLRAKYC 408


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  432 bits (1112), Expect = e-118
 Identities = 242/424 (57%), Positives = 294/424 (69%), Gaps = 21/424 (4%)
 Frame = -1

Query: 1506 NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GDNGKRV--------SM 1363
            +KH+RDQ LDFQG L++LQ W           K+Q+        + G+          S 
Sbjct: 3    SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLIDSST 62

Query: 1362 TSANQFGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIAL 1183
            TS+ Q+ Y +N D    +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI L
Sbjct: 63   TSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGL 122

Query: 1182 SPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 1003
            SP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIED
Sbjct: 123  SPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 182

Query: 1002 SEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKV 823
            +EFALRLEP+NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     TK 
Sbjct: 183  TEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----TKE 236

Query: 822  GGKPSDAGSGSKTARISVAS--------GNISSKPQSYGPSXXXXXXXXXXXVAAEAAKN 667
             G    + S S T R  VA+         N + KP+    S             AEAAKN
Sbjct: 237  NGLGMHSASNS-TQRTGVATVQGYQTKKNNRTRKPE-LKASVQELASLAATRAMAEAAKN 294

Query: 666  LSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLF 487
            +SPP TAYQFEVSW+ LSGD ALQA  LK  SP+ LPQ+FKNALSA +L+DIIKCVAT F
Sbjct: 295  ISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVATFF 354

Query: 486  MEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLR 310
             EE +LA+ +L+NLTKV RFDM+IMCLS+ +K DL K+W++VF N  T  E++E L  LR
Sbjct: 355  REEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEATPIEWAEILDNLR 414

Query: 309  SKYC 298
            S YC
Sbjct: 415  SVYC 418


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  432 bits (1111), Expect = e-118
 Identities = 242/425 (56%), Positives = 294/425 (69%), Gaps = 22/425 (5%)
 Frame = -1

Query: 1506 NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP-----GDNGKRV--------S 1366
            +KH+RDQ LDFQG L++LQ W           K+Q+         + G+          S
Sbjct: 3    SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLKTNEKGRPTGKSSLIDSS 62

Query: 1365 MTSANQFGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIA 1186
             TS+ Q+ Y +N D    +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI 
Sbjct: 63   TTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIG 122

Query: 1185 LSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 1006
            LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIE
Sbjct: 123  LSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 182

Query: 1005 DSEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTK 826
            D+EFALRLEP+NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     TK
Sbjct: 183  DTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----TK 236

Query: 825  VGGKPSDAGSGSKTARISVAS--------GNISSKPQSYGPSXXXXXXXXXXXVAAEAAK 670
              G    + S S T R  VA+         N + KP+    S             AEAAK
Sbjct: 237  ENGLGMHSASNS-TQRTGVATVQGYQTKKNNRTRKPE-LKASVQELASLAATRAMAEAAK 294

Query: 669  NLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATL 490
            N+SPP TAYQFEVSW+ LSGD ALQA  LK  SP+ LPQ+FKNALSA +L+DIIKCVAT 
Sbjct: 295  NISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVATF 354

Query: 489  FMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKL 313
            F EE +LA+ +L+NLTKV RFDM+IMCLS+ +K DL K+W++VF N  T  E++E L  L
Sbjct: 355  FREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEATPIEWAEILDNL 414

Query: 312  RSKYC 298
            RS YC
Sbjct: 415  RSVYC 419


>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
            sinensis]
          Length = 438

 Score =  431 bits (1109), Expect = e-118
 Identities = 247/439 (56%), Positives = 295/439 (67%), Gaps = 37/439 (8%)
 Frame = -1

Query: 1503 KHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQ-----FGY 1339
            KHNRDQ LDFQG L+DLQ W           K ++ S  DN    S+ SA +       Y
Sbjct: 3    KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSY 61

Query: 1338 SRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYA 1159
            SRN DP++ IS+SL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYA
Sbjct: 62   SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYA 121

Query: 1158 NRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 979
            NRAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE
Sbjct: 122  NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181

Query: 978  PDNQEVKKQHADVKDLYKKEVLKKAS-----------------AAAARDSTQEAKRVGVT 850
            P NQE+KKQ A+VK LY+KEV +KAS                   A R++TQ   + GV 
Sbjct: 182  PQNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTTQ---KTGVA 238

Query: 849  EIQ-------------TGRTKVGGKPSDAGSGSKTARIS-VASGNISSKPQSYGPSXXXX 712
            EIQ                +K  G+    GSG+    IS +   N  +K      S    
Sbjct: 239  EIQDLTISKKTENKNLRDESKTEGQRD--GSGANATHISGLDKRNHRTKKAVLDASVQEL 296

Query: 711  XXXXXXXVAAEAAKNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALS 532
                     AEAAKN++PPK+AY+FEVSW+G +GD ALQA  LKAISP  LPQ+FKNALS
Sbjct: 297  ATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKNALS 356

Query: 531  APILIDIIKCVATLFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSN 352
            A ILIDI+K VAT F  E +LA+ +L+ LT V RFD++IMCLS ADK DL K+W+E F N
Sbjct: 357  ASILIDIVKVVATFFTGEVDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWDETFCN 416

Query: 351  TNT-TEYSETLSKLRSKYC 298
             +T  EY+E L  LRSKYC
Sbjct: 417  ESTPIEYAEILDNLRSKYC 435


>gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 438

 Score =  429 bits (1103), Expect = e-117
 Identities = 244/436 (55%), Positives = 291/436 (66%), Gaps = 34/436 (7%)
 Frame = -1

Query: 1503 KHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQ-----FGY 1339
            KHNRDQ LDFQG L+DLQ W           K ++ S  DN    S+ SA +       Y
Sbjct: 3    KHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSY 61

Query: 1338 SRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYA 1159
            SRN DP++ IS+SL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYA
Sbjct: 62   SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYA 121

Query: 1158 NRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 979
            NRAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE
Sbjct: 122  NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181

Query: 978  PDNQEVKKQHADVKDLYKKEVLKKASAA--------------AARDSTQEAKRVGVTEIQ 841
            P NQE+KKQ A+VK LY+KEV +KAS                  R      ++ GV EIQ
Sbjct: 182  PQNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQ 241

Query: 840  -------------TGRTKVGGKPSDAGSGSKTARIS-VASGNISSKPQSYGPSXXXXXXX 703
                            +K  G+    GSG+    IS +   N  +K      S       
Sbjct: 242  DLTISKKTENKNLRDESKTEGQRD--GSGANATHISGLDKRNHRTKKAVLDASVQELATR 299

Query: 702  XXXXVAAEAAKNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPI 523
                  AEAAKN++PPK+AY+FEVSW+G +GD ALQA  LKAISP  LPQ+FKNALSA I
Sbjct: 300  ATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKNALSASI 359

Query: 522  LIDIIKCVATLFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT 343
            LIDI+K VAT F  E +LA+ +L+ LT V RFD++IMCLS ADK DL K+W+E F N +T
Sbjct: 360  LIDIVKVVATFFTGEVDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWDETFCNEST 419

Query: 342  -TEYSETLSKLRSKYC 298
              EY+E L  LRSKYC
Sbjct: 420  PIEYAEILDNLRSKYC 435


>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
            gi|557535662|gb|ESR46780.1| hypothetical protein
            CICLE_v10003914mg [Citrus clementina]
          Length = 977

 Score =  423 bits (1087), Expect = e-115
 Identities = 244/445 (54%), Positives = 290/445 (65%), Gaps = 34/445 (7%)
 Frame = -1

Query: 1530 YYAMARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSAN 1351
            Y A+      HNRDQ LDFQG L+DLQ W           K ++ S  DN    S+ S  
Sbjct: 533  YKAINEKMPPHNRDQALDFQGFLNDLQDWDLSLHEKDKKMKHKASSK-DNLVSSSLKSGE 591

Query: 1350 Q-----FGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIA 1186
            +       YSRN DP++RIS+SL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIA
Sbjct: 592  KPSPSGNSYSRNYDPVSRISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 651

Query: 1185 LSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 1006
            LSP+AVAYANRAMAYL+++RF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIE
Sbjct: 652  LSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 711

Query: 1005 DSEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAA--------------AARDSTQEA 868
            DSEFALRLEP NQE+KKQ A+VK LY+KEV +KAS                  R      
Sbjct: 712  DSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTI 771

Query: 867  KRVGVTEIQ-------------TGRTKVGGKPSDAGSGSKTARIS-VASGNISSKPQSYG 730
            ++ GV EIQ                +K  G+    GSG+    IS +   N  +K     
Sbjct: 772  QKTGVAEIQDLTISKKTENKNLRDESKTEGQRD--GSGANATHISGLDKRNHRTKKAVLD 829

Query: 729  PSXXXXXXXXXXXVAAEAAKNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQL 550
             S             AEAAKN++PPK+AY+FEVSW+G +GD ALQA  LKAISP  LPQ+
Sbjct: 830  ASVQELATRATSRAVAEAAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQI 889

Query: 549  FKNALSAPILIDIIKCVATLFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMW 370
            FKNALSA ILIDI+K VA  F  E +LA+ +L+ LT V RFD +IMCLS ADK DL K+W
Sbjct: 890  FKNALSASILIDIVKVVAMFFPGEVDLAIKYLEYLTMVPRFDFVIMCLSLADKADLRKVW 949

Query: 369  EEVFSNTNT-TEYSETLSKLRSKYC 298
            +E F N  T  EY+E L  LRSKYC
Sbjct: 950  DETFCNELTPIEYAEILDNLRSKYC 974


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508719763|gb|EOY11660.1|
            Tetratricopeptide repeat-like superfamily protein,
            putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  421 bits (1081), Expect = e-114
 Identities = 242/465 (52%), Positives = 299/465 (64%), Gaps = 62/465 (13%)
 Frame = -1

Query: 1506 NKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSP----GDNGKRV--------SM 1363
            +KH+RDQ LDFQG L++LQ W           K+Q+        + G+          S 
Sbjct: 3    SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTNEKGRPTGKSSLIDSST 62

Query: 1362 TSANQFGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIAL 1183
            TS+ Q+ Y +N D    +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI L
Sbjct: 63   TSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGL 122

Query: 1182 SPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 1003
            SP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIED
Sbjct: 123  SPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 182

Query: 1002 SEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTE-------- 847
            +EFALRLEP+NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E        
Sbjct: 183  TEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVL-RKSMQEAQEVGKSETKENGLGM 241

Query: 846  --------------IQTGRTKV-------------------GGKPSDAGSGSKTARI--- 775
                          +Q  +TKV                   G + + AGS     ++   
Sbjct: 242  HSASNSTQRTGVATVQGYQTKVSEYDKQKKPEKGSVTSEGIGDRNTLAGSRKDGTQLDSG 301

Query: 774  -----SVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQFEVSWKGLSG 610
                 S+   N + KP+    S             AEAAKN+SPP TAYQFEVSW+ LSG
Sbjct: 302  IVGLESIKKNNRTRKPELKA-SVQELASLAATRAMAEAAKNISPPNTAYQFEVSWRALSG 360

Query: 609  DPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVNFLDNLTKVSR 430
            D ALQA  LK  SP+ LPQ+FKNALSA +L+DIIKCVAT F EE +LA+ +L+NLTKV R
Sbjct: 361  DRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVATFFREEVDLAIKYLENLTKVPR 420

Query: 429  FDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            FDM+IMCLS+ +K DL K+W++VF N  T  E++E L  LRS YC
Sbjct: 421  FDMLIMCLSSTEKADLLKVWDDVFCNEATPIEWAEILDNLRSVYC 465


>ref|XP_007205290.1| hypothetical protein PRUPE_ppa006661mg [Prunus persica]
            gi|462400932|gb|EMJ06489.1| hypothetical protein
            PRUPE_ppa006661mg [Prunus persica]
          Length = 401

 Score =  421 bits (1081), Expect = e-114
 Identities = 228/409 (55%), Positives = 280/409 (68%), Gaps = 1/409 (0%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR PNKH RDQ LD++  L D                  SH      + +  +S N + 
Sbjct: 1    MARAPNKHGRDQALDWELSLKDKD---------KKMRPKDSHQEKLKTRDLGTSSGN-YD 50

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I  +S+S + ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 51   YSRNLDSINTMSSSFISEDSLPDAASEKELGNEYFKQKKFREAIDCYSRSIALSPSAVAY 110

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANRAMAY++IK F+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIED+EFALRL
Sbjct: 111  ANRAMAYIKIKSFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRL 170

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+ + K LY K +L+KAS  A ++S QE ++VG  + +     +    S A
Sbjct: 171  EPQNQEIKKQYTEAKSLYDKTILQKAS-GAQKNSVQEMRKVGKLDTKVNGQSIQPASSSA 229

Query: 801  GSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQFEVSWK 622
                 TA       N +++      S           V A AA+ + PP +AYQFEVSW+
Sbjct: 230  QITEMTAVQDHTKRNNTTRNPEVKASVQELASRAASRVKAVAAEKIKPPNSAYQFEVSWR 289

Query: 621  GLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVNFLDNLT 442
            G SGD A Q + LKAISP+ LPQ+FKNAL+ PIL+DIIKCVAT F+EE +LAVN+L+NLT
Sbjct: 290  GFSGDNARQTSLLKAISPSALPQIFKNALTVPILLDIIKCVATFFVEEMDLAVNYLENLT 349

Query: 441  KVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +V RFD +IM LS++D  DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 350  RVPRFDTLIMFLSSSDNADLVKIWDEVFDNEATPIEYAEKLDNLRTKYC 398


>ref|XP_009373289.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Pyrus x
            bretschneideri]
          Length = 402

 Score =  415 bits (1067), Expect = e-113
 Identities = 238/415 (57%), Positives = 285/415 (68%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MA  PNKH RDQ LD++  L D               + Q         R S TS+  + 
Sbjct: 1    MASPPNKHGRDQALDWELSLKDKD----------KKMRPQVSQQEKLKTRDSGTSSENYD 50

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 51   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 110

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MA ++IKRF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 111  ANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 170

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGK---- 814
            EP NQE+K+Q+ + K LY K  L+KAS  A ++S QE ++ G ++     TKV GK    
Sbjct: 171  EPHNQEIKRQYTEAKSLYDKSNLQKAS-GALKNSVQEMQKRGKSD-----TKVNGKGIQP 224

Query: 813  -PSDAGSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAA-KNLSPPKTAYQ 640
              S A     TA      G+ ++K Q    S               AA KN++PP TAYQ
Sbjct: 225  VSSKAQITEITAVQDHDKGDNTNKKQEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 284

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDIIKCVAT F+EE ELAVN
Sbjct: 285  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIIKCVATFFVEEMELAVN 344

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 345  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNDATPIEYAEKLGNLRAKYC 399


>gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 431

 Score =  415 bits (1066), Expect = e-113
 Identities = 237/428 (55%), Positives = 284/428 (66%), Gaps = 34/428 (7%)
 Frame = -1

Query: 1479 DFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQ-----FGYSRNSDPIT 1315
            DFQG L+DLQ W           K ++ S  DN    S+ SA +       YSRN DP++
Sbjct: 4    DFQGFLNDLQDWDLSLNEKDKKMKHKASSK-DNLVSSSLKSAKKPSPSGNSYSRNYDPVS 62

Query: 1314 RISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAYANRAMAYLR 1135
             IS+SL+++E +PDA SEKELGNE FKQKKF EAIDCYSRSIALSP+AVAYANRAMAYL+
Sbjct: 63   HISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK 122

Query: 1134 IKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPDNQEVKK 955
            ++RF+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP NQE+KK
Sbjct: 123  LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 182

Query: 954  QHADVKDLYKKEVLKKASAA--------------AARDSTQEAKRVGVTEIQ-------- 841
            Q A+VK LY+KEV +KAS                  R      ++ GV EIQ        
Sbjct: 183  QLAEVKSLYEKEVFQKASKTLEKYGKSGMKVNGHEVRAVRNTIQKTGVAEIQDLTISKKT 242

Query: 840  -----TGRTKVGGKPSDAGSGSKTARIS-VASGNISSKPQSYGPSXXXXXXXXXXXVAAE 679
                    +K  G+    GSG+    IS +   N  +K      S             AE
Sbjct: 243  ENKNLRDESKTEGQRD--GSGANATHISGLDKRNHRTKKAVLDASVQELATRATSRAVAE 300

Query: 678  AAKNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCV 499
            AAKN++PPK+AY+FEVSW+G +GD ALQA  LKAISP  LPQ+FKNALSA ILIDI+K V
Sbjct: 301  AAKNITPPKSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKNALSASILIDIVKVV 360

Query: 498  ATLFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETL 322
            AT F  E +LA+ +L+ LT V RFD++IMCLS ADK DL K+W+E F N +T  EY+E L
Sbjct: 361  ATFFTGEVDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWDETFCNESTPIEYAEIL 420

Query: 321  SKLRSKYC 298
              LRSKYC
Sbjct: 421  DNLRSKYC 428


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
            [Fragaria vesca subsp. vesca]
          Length = 407

 Score =  415 bits (1066), Expect = e-113
 Identities = 228/414 (55%), Positives = 285/414 (68%), Gaps = 6/414 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR P+KH RDQ LDFQG LSDLQ W           + Q  +      R   TS+    
Sbjct: 1    MARAPSKHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQQPNKEAPKSRDFGTSS---- 56

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YS N +P+  +S+S   ++  PDA SEK+LGNEYFKQKKF EAIDCYSRSIAL+P+AVA+
Sbjct: 57   YSTNYEPMNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSIALTPTAVAF 116

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANRAM+Y++IKRF+EAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIED+EFALRL
Sbjct: 117  ANRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAEFALRL 176

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+A+ K LY+K +L+K S  A + S Q+ ++V     +   T V G     
Sbjct: 177  EPHNQEIKKQYAEAKSLYEKGILQKVS-GAIKISEQDKQKV-----EKSGTTVNGHSIQP 230

Query: 801  GSGSKTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAE-----AAKNLSPPKTAYQF 637
             S +     + A G+ + K  + G              AA      AA+N++PP +AYQF
Sbjct: 231  VSSTTQRTETTAVGDHTKKINTNGKQASKLSVQELASRAASRAKALAAENITPPSSAYQF 290

Query: 636  EVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVNF 457
            E SW+GLSGD ALQA  LKAISP+ LPQ+FKNAL+  IL+DI+KCV T F++E +LAV+ 
Sbjct: 291  EASWRGLSGDRALQAKLLKAISPSALPQIFKNALTVHILVDILKCVTTFFIDEMDLAVSV 350

Query: 456  LDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            L+NLTKV RFD +IM LS+ DK DL K+W+EVF N  T  E++E L  LR+KYC
Sbjct: 351  LENLTKVPRFDTLIMFLSSNDKADLAKIWDEVFYNEATPIEFAEKLDNLRAKYC 404


>ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            isoform 5 [Theobroma cacao] gi|508719767|gb|EOY11664.1|
            Tetratricopeptide repeat (TPR)-like superfamily protein,
            putative isoform 5 [Theobroma cacao]
          Length = 389

 Score =  414 bits (1064), Expect = e-112
 Identities = 225/366 (61%), Positives = 269/366 (73%), Gaps = 9/366 (2%)
 Frame = -1

Query: 1368 SMTSANQFGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSI 1189
            S TS+ Q+ Y +N D    +S+S + +E  PDA SEKELGNEYFKQKKF EAIDCYSRSI
Sbjct: 29   STTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSI 88

Query: 1188 ALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESI 1009
             LSP+AVA+ANRAMAYL+IK+F+EAE+DCTEALNLDDRYIKAYSRRATARKELGKLKESI
Sbjct: 89   GLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 148

Query: 1008 EDSEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRT 829
            ED+EFALRLEP+NQE+KKQHA+ K LY+KE+L+KAS    R S QEA+ VG +E     T
Sbjct: 149  EDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKAS-GVLRKSMQEAQEVGKSE-----T 202

Query: 828  KVGGKPSDAGSGSKTARISVAS--------GNISSKPQSYGPSXXXXXXXXXXXVAAEAA 673
            K  G    + S S T R  VA+         N + KP+    S             AEAA
Sbjct: 203  KENGLGMHSASNS-TQRTGVATVQGYQTKKNNRTRKPE-LKASVQELASLAATRAMAEAA 260

Query: 672  KNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVAT 493
            KN+SPP TAYQFEVSW+ LSGD ALQA  LK  SP+ LPQ+FKNALSA +L+DIIKCVAT
Sbjct: 261  KNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASMLVDIIKCVAT 320

Query: 492  LFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSK 316
             F EE +LA+ +L+NLTKV RFDM+IMCLS+ +K DL K+W++VF N  T  E++E L  
Sbjct: 321  FFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEATPIEWAEILDN 380

Query: 315  LRSKYC 298
            LRS YC
Sbjct: 381  LRSVYC 386


>ref|XP_009611912.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
            [Nicotiana tomentosiformis]
          Length = 427

 Score =  413 bits (1061), Expect = e-112
 Identities = 236/432 (54%), Positives = 292/432 (67%), Gaps = 25/432 (5%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQ-----------SHSP----- 1390
            MARVP+KH+RDQ  D QG+L+ LQ W           K+Q           SH+      
Sbjct: 1    MARVPSKHSRDQFQDMQGLLNTLQDWELSLKDKDKKMKSQARGKEKLREDWSHTSELPTG 60

Query: 1389 ----GDN--GKRVSMTSA-NQFGYSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQ 1231
                G    GK  S++SA   + YS+  +P + +S+ +L +E + DANSEKELGNE+FKQ
Sbjct: 61   PQVTGTQRVGKSTSISSAAGPYDYSKKYNPTSHLSSEMLSEESNIDANSEKELGNEFFKQ 120

Query: 1230 KKFNEAIDCYSRSIALSPSAVAYANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRR 1051
            KKF EAI CYSRSIALSP+AVAYANRAMAYL+IKRF+EAENDCTEALNLDDRYIKAYSRR
Sbjct: 121  KKFKEAIICYSRSIALSPTAVAYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRR 180

Query: 1050 ATARKELGKLKESIEDSEFALRLEPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQE 871
            +TARKELGKLKESIED+EFA RLEP NQE+KKQ+ +VK LY+KE+LK+ SAA    S Q 
Sbjct: 181  STARKELGKLKESIEDAEFASRLEPQNQEIKKQYGEVKALYEKEILKRVSAATG-VSAQG 239

Query: 870  AKRVGVTEIQTGRTKVGGKPSDAGSGSKTARIS--VASGNISSKPQSYGPSXXXXXXXXX 697
            A++ G T  +TG        S +GS  K A +    A     +  Q    S         
Sbjct: 240  AQKTGKTN-KTGPV----IQSVSGSSQKVAEVRKIPAKRTHKNSKQELKESVQELAARAA 294

Query: 696  XXVAAEAAKNLSPPKTAYQFEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILI 517
                AEAAKN++PP +AYQFEVSW+GLSGD  LQ   LK  SP TLPQ+FKNALSAP+L+
Sbjct: 295  SLAKAEAAKNIAPPNSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLPQIFKNALSAPMLM 354

Query: 516  DIIKCVATLFMEETELAVNFLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNTTE 337
            DI++CVAT  +E+ +LA+ +L+NLTKV RFDMIIMCLS+ DK +L K+W+EVF      E
Sbjct: 355  DIVRCVATFSIEDMDLAIRYLENLTKVPRFDMIIMCLSSTDKAELVKIWDEVFCK-GAEE 413

Query: 336  YSETLSKLRSKY 301
            ++ TLS LR  Y
Sbjct: 414  HTATLSALRLNY 425


>ref|XP_008388474.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Malus
            domestica]
          Length = 402

 Score =  412 bits (1060), Expect = e-112
 Identities = 233/415 (56%), Positives = 279/415 (67%), Gaps = 7/415 (1%)
 Frame = -1

Query: 1521 MARVPNKHNRDQNLDFQGMLSDLQGWXXXXXXXXXXXKAQSHSPGDNGKRVSMTSANQFG 1342
            MAR PNKH RDQ LD++  L D               + Q         R S TS+  + 
Sbjct: 1    MARPPNKHGRDQALDWELSLKDKD----------KKMRPQVSQQEXLKTRDSGTSSGNYD 50

Query: 1341 YSRNSDPITRISNSLLHDEESPDANSEKELGNEYFKQKKFNEAIDCYSRSIALSPSAVAY 1162
            YSRN D I RIS+SL  ++  PDA SEKELGNEYFKQKKF EAIDCYSRSIALSPSAVAY
Sbjct: 51   YSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSAVAY 110

Query: 1161 ANRAMAYLRIKRFEEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 982
            ANR MAY++I+RF+EAE+DCT ALNLDDRYIKAYSRRATARKELGKLKES ED+EFALRL
Sbjct: 111  ANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYSRRATARKELGKLKESFEDAEFALRL 170

Query: 981  EPDNQEVKKQHADVKDLYKKEVLKKASAAAARDSTQEAKRVGVTEIQTGRTKVGGKPSDA 802
            EP NQE+KKQ+ + K LY K  L+KAS  A ++S QE ++ G  +     TKV GK    
Sbjct: 171  EPHNQEIKKQYTEAKSLYDKSNLEKAS-GALKNSVQEXQKRGKLD-----TKVNGKGIQP 224

Query: 801  GSGS------KTARISVASGNISSKPQSYGPSXXXXXXXXXXXVAAEAAKNLSPPKTAYQ 640
             S S         +      N + K +                    A KN++PP TAYQ
Sbjct: 225  VSXSAQITEITXVQDHTKGDNTNKKLEVKASVQELASRAASKAKVVAAEKNITPPTTAYQ 284

Query: 639  FEVSWKGLSGDPALQATFLKAISPTTLPQLFKNALSAPILIDIIKCVATLFMEETELAVN 460
            FEVSW+ LSGD ALQA+ LK+ISP+ LPQ+FKNAL+ PILIDII CVAT F+EE ELAVN
Sbjct: 285  FEVSWRDLSGDSALQASLLKSISPSALPQIFKNALTVPILIDIINCVATFFVEEMELAVN 344

Query: 459  FLDNLTKVSRFDMIIMCLSAADKTDLHKMWEEVFSNTNT-TEYSETLSKLRSKYC 298
            +L+NLTKV RFD +I+ LS+++K DL K+W+EVF N  T  EY+E L  LR+KYC
Sbjct: 345  YLENLTKVPRFDTLIIFLSSSNKADLDKIWDEVFYNEATPIEYAEKLGNLRAKYC 399