BLASTX nr result
ID: Papaver31_contig00029523
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00029523
(1982 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010257601.1| PREDICTED: protein RRP5 homolog [Nelumbo nuc... 148 7e-43
ref|XP_007029112.1| RNA binding,RNA binding isoform 1 [Theobroma... 137 5e-42
ref|XP_007029113.1| RNA binding,RNA binding isoform 2 [Theobroma... 137 5e-42
ref|XP_012485659.1| PREDICTED: protein RRP5 homolog isoform X1 [... 134 6e-41
gb|KJB33048.1| hypothetical protein B456_006G145100 [Gossypium r... 134 6e-41
gb|KJB33045.1| hypothetical protein B456_006G145100 [Gossypium r... 134 6e-41
ref|XP_012485660.1| PREDICTED: protein RRP5 homolog isoform X2 [... 134 6e-41
ref|XP_012485661.1| PREDICTED: protein RRP5 homolog isoform X3 [... 134 6e-41
gb|KJB33046.1| hypothetical protein B456_006G145100 [Gossypium r... 134 6e-41
gb|KJB33044.1| hypothetical protein B456_006G145100 [Gossypium r... 134 6e-41
gb|KJB33049.1| hypothetical protein B456_006G145100 [Gossypium r... 134 6e-41
gb|KHF99545.1| Protein RRP5 [Gossypium arboreum] 134 1e-40
ref|XP_010934559.1| PREDICTED: protein RRP5 homolog isoform X1 [... 132 3e-39
ref|XP_012090853.1| PREDICTED: protein RRP5 homolog [Jatropha cu... 134 3e-39
ref|XP_010934562.1| PREDICTED: protein RRP5 homolog isoform X2 [... 132 3e-39
ref|XP_008789163.1| PREDICTED: protein RRP5 homolog [Phoenix dac... 130 1e-38
ref|XP_011039519.1| PREDICTED: protein RRP5 homolog [Populus eup... 130 7e-38
ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Popu... 130 1e-37
ref|XP_010317858.1| PREDICTED: protein RRP5 homolog [Solanum lyc... 128 2e-37
emb|CDP14292.1| unnamed protein product [Coffea canephora] 127 3e-37
>ref|XP_010257601.1| PREDICTED: protein RRP5 homolog [Nelumbo nucifera]
Length = 1933
Score = 148 bits (373), Expect(3) = 7e-43
Identities = 83/139 (59%), Positives = 100/139 (71%), Gaps = 15/139 (10%)
Frame = +1
Query: 97 LHNDEDS-IKRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT------ 240
L+ND +S I R +RIE+IHPNM V+GYVKN+ SKGCF K + L L+
Sbjct: 1355 LNNDLNSLISRVKRIEDIHPNMAVKGYVKNVTSKGCFIMLSRKIDAKILLSNLSDGFIEN 1414
Query: 241 ---AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQ 411
FPVGKL+ GKVLSVEPLSKRVEV+L+T + S +SK D CD +LH+GDVISGRIK+
Sbjct: 1415 PEEEFPVGKLVSGKVLSVEPLSKRVEVTLRTENTSSASKIDMCDLSSLHVGDVISGRIKR 1474
Query: 412 VETYGLCITIDQTNMVGLC 468
VETYGL I ID TN+VGLC
Sbjct: 1475 VETYGLFIIIDPTNLVGLC 1493
Score = 55.1 bits (131), Expect(3) = 7e-43
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV----------- 613
++L D+H +NI KYRAGE+V K+LK D ER +IS GMKN + DD
Sbjct: 1496 SELSDDHIDNIGSKYRAGERVMTKILK-VDKERQRISLGMKNSYLSDDTSVDLLNRNIDE 1554
Query: 614 --HDDASAD---LTLNQDRGVYADSGSDSD 688
H++ D ++++Q+R SD D
Sbjct: 1555 NKHENGLVDDPLVSISQERSACGIQDSDPD 1584
Score = 21.9 bits (45), Expect(3) = 7e-43
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 8 KLVALRTGTTHVDLSLRAS 64
+++ G HVDLSLRA+
Sbjct: 1324 EIIRSTKGLLHVDLSLRAT 1342
Score = 72.8 bits (177), Expect(2) = 1e-23
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LVEAE+TD+KPL G+ V + E V F KFKVGQ LTARIVAK
Sbjct: 1061 LVEAEITDIKPLELRLKFGIGFRGRVHITEVNDHHF-VEDPFSKFKVGQQLTARIVAKFN 1119
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
S+K K Q ELS+ P+++SG E+E+ +++ + +FSIG + G V++
Sbjct: 1120 QSEKNRKACQWELSLRPTLLSGASELEDGVITDDFNFSIGKLATGYVVK 1168
Score = 67.4 bits (163), Expect(2) = 1e-23
Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVSKGTL-----------DIGALENVSEH 1842
KRF VGK V+GH+L+++ EK L+RLI HPLS VS TL I + E V+EH
Sbjct: 1203 KRFYVGKAVSGHVLNINKEKKLLRLIPHPLSIVSNATLGNKITKKDDPESIISNEFVTEH 1262
Query: 1843 IHEGDVRAGRIK------------------GSFY*TYR*LD--AKPASWI*EGQFVKYKV 1962
IHEGDV GRI G + T + + P EGQFVK +V
Sbjct: 1263 IHEGDVLGGRINRILPGVGGLLVQIGPHLHGKVHFTELADEWLSNPLLEYQEGQFVKCQV 1322
Query: 1963 VEIGRS 1980
+EI RS
Sbjct: 1323 LEIIRS 1328
Score = 61.6 bits (148), Expect = 3e-06
Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGAL-HL 1498
E RLKFG+ F GRVHITE+ + S V + + +K+ L
Sbjct: 1073 ELRLKFGIGFRGRVHITEVNDHHFVEDPFSKFKVGQQLTARIVAKFNQSEKNRKACQWEL 1132
Query: 1499 TVNDFRTQRNRE*ADVPGV*FFNW---KRITGYGVKVDNDWVWLIVSRHMMAKLSLLDNA 1669
++ E D FN+ K TGY VKVD +WVWL VSRH+ A L LLD++
Sbjct: 1133 SLRPTLLSGASELEDGVITDDFNFSIGKLATGYVVKVDKEWVWLTVSRHVKAHLFLLDSS 1192
Query: 1670 IEPSKLRD 1693
EPS+L D
Sbjct: 1193 CEPSELID 1200
>ref|XP_007029112.1| RNA binding,RNA binding isoform 1 [Theobroma cacao]
gi|508717717|gb|EOY09614.1| RNA binding,RNA binding
isoform 1 [Theobroma cacao]
Length = 1824
Score = 137 bits (346), Expect(3) = 5e-42
Identities = 72/140 (51%), Positives = 100/140 (71%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
EL +DEDS KR E+IE+++PNM +QGYVKN + KGCF K + L L+
Sbjct: 1251 ELGSDEDSTSKRVEKIEDLYPNMAIQGYVKNTIPKGCFILLSRKLDAKILLSNLSDGYID 1310
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + + +SK++ D +LH+GD++SGRI+
Sbjct: 1311 DPKKEFPIGKLVAGRVLAVEPLSKRVEVTLKKSNTNGTSKSEINDFSSLHVGDIVSGRIR 1370
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL +T+D TNMVGLC
Sbjct: 1371 RVESYGLFVTLDHTNMVGLC 1390
Score = 60.1 bits (144), Expect(3) = 5e-42
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV 613
++L D+H +NI KYRAGEKV AK+LK D ERH+IS GMKN + DD+
Sbjct: 1393 SELSDDHVDNIQTKYRAGEKVTAKILK-LDEERHRISLGMKNSYLTDDI 1440
Score = 24.3 bits (51), Expect(3) = 5e-42
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 29 GTTHVDLSLRASL 67
GT H+DLSLR SL
Sbjct: 1229 GTIHIDLSLRLSL 1241
Score = 61.2 bits (147), Expect(2) = 9e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GH+L+V+ +K L+RL+ HPL ++S G D + E+V+ H
Sbjct: 1101 ERFKVGKAVSGHVLNVNKDKKLLRLVRHPLGALSIRNVHGEDKRTGESDNNISGESVTTH 1160
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1161 IHEGDILGGRISKILPGVGGLLVQIGPHIFGRVHFTELKDTWESDPLSGYYEGQFVKCKV 1220
Query: 1963 VEIGRS 1980
+EI S
Sbjct: 1221 LEISHS 1226
Score = 58.9 bits (141), Expect(2) = 9e-18
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVH+TE+ + + N A V QK + L +
Sbjct: 976 ELRLKFGIGFRGRVHVTEVNDDNVL--ENPFGNFKIGQTITARVVGKANQKGYLWDLSIK 1033
Query: 1502 -----------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAK 1648
VN + N F + +TGY K+D +W WL +SRH+ A+
Sbjct: 1034 PTMLAGTGETGVNSTNDECN----------FSAGQLVTGYVYKMDTEWAWLTISRHVKAQ 1083
Query: 1649 LSLLDNAIEPSKLR 1690
L +LD+A EP++L+
Sbjct: 1084 LYILDSAREPNELQ 1097
>ref|XP_007029113.1| RNA binding,RNA binding isoform 2 [Theobroma cacao]
gi|508717718|gb|EOY09615.1| RNA binding,RNA binding
isoform 2 [Theobroma cacao]
Length = 1790
Score = 137 bits (346), Expect(3) = 5e-42
Identities = 72/140 (51%), Positives = 100/140 (71%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
EL +DEDS KR E+IE+++PNM +QGYVKN + KGCF K + L L+
Sbjct: 1251 ELGSDEDSTSKRVEKIEDLYPNMAIQGYVKNTIPKGCFILLSRKLDAKILLSNLSDGYID 1310
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + + +SK++ D +LH+GD++SGRI+
Sbjct: 1311 DPKKEFPIGKLVAGRVLAVEPLSKRVEVTLKKSNTNGTSKSEINDFSSLHVGDIVSGRIR 1370
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL +T+D TNMVGLC
Sbjct: 1371 RVESYGLFVTLDHTNMVGLC 1390
Score = 60.1 bits (144), Expect(3) = 5e-42
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV 613
++L D+H +NI KYRAGEKV AK+LK D ERH+IS GMKN + DD+
Sbjct: 1393 SELSDDHVDNIQTKYRAGEKVTAKILK-LDEERHRISLGMKNSYLTDDI 1440
Score = 24.3 bits (51), Expect(3) = 5e-42
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 29 GTTHVDLSLRASL 67
GT H+DLSLR SL
Sbjct: 1229 GTIHIDLSLRLSL 1241
Score = 61.2 bits (147), Expect(2) = 9e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GH+L+V+ +K L+RL+ HPL ++S G D + E+V+ H
Sbjct: 1101 ERFKVGKAVSGHVLNVNKDKKLLRLVRHPLGALSIRNVHGEDKRTGESDNNISGESVTTH 1160
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1161 IHEGDILGGRISKILPGVGGLLVQIGPHIFGRVHFTELKDTWESDPLSGYYEGQFVKCKV 1220
Query: 1963 VEIGRS 1980
+EI S
Sbjct: 1221 LEISHS 1226
Score = 58.9 bits (141), Expect(2) = 9e-18
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVH+TE+ + + N A V QK + L +
Sbjct: 976 ELRLKFGIGFRGRVHVTEVNDDNVL--ENPFGNFKIGQTITARVVGKANQKGYLWDLSIK 1033
Query: 1502 -----------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAK 1648
VN + N F + +TGY K+D +W WL +SRH+ A+
Sbjct: 1034 PTMLAGTGETGVNSTNDECN----------FSAGQLVTGYVYKMDTEWAWLTISRHVKAQ 1083
Query: 1649 LSLLDNAIEPSKLR 1690
L +LD+A EP++L+
Sbjct: 1084 LYILDSAREPNELQ 1097
>ref|XP_012485659.1| PREDICTED: protein RRP5 homolog isoform X1 [Gossypium raimondii]
gi|763765827|gb|KJB33042.1| hypothetical protein
B456_006G145100 [Gossypium raimondii]
Length = 1928
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1349 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1408
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1409 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1468
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1469 RVESYGLFITLDHTNMVGLC 1488
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1491 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1549
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1550 EDI---EETGVADDDADDEARS 1568
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1327 GTIHIDLSLRLSLDGMISKNPL 1348
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1074 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1131
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1132 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1186
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1187 SGCEPNELQ 1195
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1199 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1258
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1259 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1318
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1319 LEVSHS 1324
>gb|KJB33048.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
Length = 1927
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1348 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1407
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1408 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1467
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1468 RVESYGLFITLDHTNMVGLC 1487
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1490 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1548
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1549 EDI---EETGVADDDADDEARS 1567
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1326 GTIHIDLSLRLSLDGMISKNPL 1347
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1073 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1130
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1131 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1185
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1186 SGCEPNELQ 1194
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1198 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1257
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1258 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1317
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1318 LEVSHS 1323
>gb|KJB33045.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
Length = 1927
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1348 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1407
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1408 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1467
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1468 RVESYGLFITLDHTNMVGLC 1487
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1490 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1548
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1549 EDI---EETGVADDDADDEARS 1567
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1326 GTIHIDLSLRLSLDGMISKNPL 1347
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1073 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1130
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1131 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1185
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1186 SGCEPNELQ 1194
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1198 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1257
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1258 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1317
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1318 LEVSHS 1323
>ref|XP_012485660.1| PREDICTED: protein RRP5 homolog isoform X2 [Gossypium raimondii]
Length = 1894
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1315 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1374
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1375 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1434
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1435 RVESYGLFITLDHTNMVGLC 1454
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1457 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1515
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1516 EDI---EETGVADDDADDEARS 1534
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1293 GTIHIDLSLRLSLDGMISKNPL 1314
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1040 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1097
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1098 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1152
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1153 SGCEPNELQ 1161
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1165 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1224
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1225 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1284
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1285 LEVSHS 1290
>ref|XP_012485661.1| PREDICTED: protein RRP5 homolog isoform X3 [Gossypium raimondii]
Length = 1893
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1314 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1373
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1374 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1433
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1434 RVESYGLFITLDHTNMVGLC 1453
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1456 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1514
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1515 EDI---EETGVADDDADDEARS 1533
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1292 GTIHIDLSLRLSLDGMISKNPL 1313
Score = 60.5 bits (145), Expect(2) = 3e-17
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1164 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1223
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1224 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1283
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1284 LEVSHS 1289
Score = 58.2 bits (139), Expect(2) = 3e-17
Identities = 41/123 (33%), Positives = 60/123 (48%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE S+ K + G+ IG + T
Sbjct: 1074 ELRLKFGIGFCGRVHITEDLSI------------------KPAMLADTGE---IG-VKTT 1111
Query: 1502 VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLDNAIEPS 1681
+ +F F + +TGY KVD++W WL +SRH+ A+L +LD+ EP+
Sbjct: 1112 LEEFD--------------FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDSGCEPN 1157
Query: 1682 KLR 1690
+L+
Sbjct: 1158 ELQ 1160
>gb|KJB33046.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
Length = 1870
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1349 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1408
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1409 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1468
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1469 RVESYGLFITLDHTNMVGLC 1488
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1491 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1549
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1550 EDI---EETGVADDDADDEARS 1568
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1327 GTIHIDLSLRLSLDGMISKNPL 1348
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1074 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1131
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1132 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1186
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1187 SGCEPNELQ 1195
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1199 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1258
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1259 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1318
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1319 LEVSHS 1324
>gb|KJB33044.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
gi|763765832|gb|KJB33047.1| hypothetical protein
B456_006G145100 [Gossypium raimondii]
Length = 1834
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 1349 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 1408
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 1409 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 1468
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1469 RVESYGLFITLDHTNMVGLC 1488
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1491 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1549
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1550 EDI---EETGVADDDADDEARS 1568
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 1327 GTIHIDLSLRLSLDGMISKNPL 1348
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1074 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1131
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1132 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1186
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 1187 SGCEPNELQ 1195
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 1199 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 1258
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 1259 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 1318
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 1319 LEVSHS 1324
>gb|KJB33049.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
Length = 1305
Score = 134 bits (337), Expect(3) = 6e-41
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
+L +D DS KR E++E+++PNM VQGYVKN++ KGCF K + L L+
Sbjct: 726 KLASDADSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVN 785
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK + +SK++ D LH+GD++SGRI+
Sbjct: 786 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIR 845
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 846 RVESYGLFITLDHTNMVGLC 865
Score = 59.3 bits (142), Expect(3) = 6e-41
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 868 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 926
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 927 EDI---EETGVADDDADDEARS 945
Score = 25.0 bits (53), Expect(3) = 6e-41
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTL 94
GT H+DLSLR SL +++ L
Sbjct: 704 GTIHIDLSLRLSLDGMISKNPL 725
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 451 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 508
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 509 PAMLADTGEIGVKTTLEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 563
Query: 1664 NAIEPSKLR 1690
+ EP++L+
Sbjct: 564 SGCEPNELQ 572
Score = 60.5 bits (145), Expect(2) = 3e-18
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 31/126 (24%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVS----------KGTLDIG-ALENVSEH 1842
+RF VGK V+GHIL+V+ +K LIR++ HPL ++S KG D + ++V H
Sbjct: 576 ERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESDNNISDDSVIAH 635
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
IHEGD+ GRI + F ++ P S EGQFVK KV
Sbjct: 636 IHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKV 695
Query: 1963 VEIGRS 1980
+E+ S
Sbjct: 696 LEVSHS 701
>gb|KHF99545.1| Protein RRP5 [Gossypium arboreum]
Length = 1870
Score = 134 bits (337), Expect(3) = 1e-40
Identities = 71/140 (50%), Positives = 97/140 (69%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDSI-KRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT----- 240
EL +D DS KR E++E+++PNM VQGYVKN++ KGCF K + + L+
Sbjct: 1291 ELASDVDSTSKRAEKVEDLYPNMAVQGYVKNVIPKGCFIMLSRKVDAKILMSNLSNGYVN 1350
Query: 241 ----AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKL+ G+VL+VEPLSKRVEV+LK +SK++ D LH+GD++SGRI+
Sbjct: 1351 DPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIR 1410
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL IT+D TNMVGLC
Sbjct: 1411 RVESYGLFITLDHTNMVGLC 1430
Score = 59.3 bits (142), Expect(3) = 1e-40
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV------HDDAS 628
++L D+H ENI Y AGEKVKAK+LK D ERH+IS GMKN DD+ +++
Sbjct: 1433 SELSDDHIENIQTNYAAGEKVKAKILK-LDEERHRISLGMKNSYFTDDIDFQITEQEESD 1491
Query: 629 ADLTLNQDRGVYADSGSDSDSS 694
D+ ++ GV D D S
Sbjct: 1492 EDI---EETGVADDDADDEARS 1510
Score = 24.3 bits (51), Expect(3) = 1e-40
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 29 GTTHVDLSLRASL 67
GT H+DLSLR SL
Sbjct: 1269 GTIHIDLSLRLSL 1281
Score = 60.1 bits (144), Expect(2) = 1e-17
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCVR*EGQKDPIGALHLT 1501
E RLKFG+ F GRVHITE+ + + + N A V QK + L +
Sbjct: 1016 ELRLKFGIGFCGRVHITEVNDNNVL--EKPFGNFKVGQTITARIVGKPNQKGHLWDLSIK 1073
Query: 1502 ------VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLLD 1663
+ + E D F + +TGY KVD++W WL +SRH+ A+L +LD
Sbjct: 1074 PAMLADAGEIGVKTALEEFD-----FSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILD 1128
Query: 1664 NAIEPSKLR 1690
EP++L+
Sbjct: 1129 TGCEPNELQ 1137
Score = 59.7 bits (143), Expect(2) = 1e-17
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 33/128 (25%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVSKGTLDIG-------------ALENVS 1836
+RF VGK V+GHIL+V+ +K L++++ HPL ++S T ++G + E+V+
Sbjct: 1141 ERFKVGKPVSGHILNVNKDKKLLQIVRHPLGALS--TRNVGDEDKRKGESGNNISDESVT 1198
Query: 1837 EHIHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKY 1956
HIHEGD+ GRI + F ++ P S EGQFVK
Sbjct: 1199 AHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKC 1258
Query: 1957 KVVEIGRS 1980
KV+E+ S
Sbjct: 1259 KVLEVSHS 1266
>ref|XP_010934559.1| PREDICTED: protein RRP5 homolog isoform X1 [Elaeis guineensis]
Length = 1930
Score = 132 bits (332), Expect(3) = 3e-39
Identities = 71/137 (51%), Positives = 92/137 (67%), Gaps = 14/137 (10%)
Frame = +1
Query: 100 HNDEDSIKRFERIEEIHPNMVVQGYVKNLMSKGCFKTYQT-----VSLKTLT-------- 240
+N I+RFE+IE++HPNM VQGYVKN+ SKGCF + L L+
Sbjct: 1354 NNLNTHIQRFEKIEDLHPNMDVQGYVKNVTSKGCFIMLSRMIDARILLSNLSDGYIENPE 1413
Query: 241 -AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQVE 417
FP GKL+ G+VLSV+P SKRVEV+LKT + +K+D CNLH+GDVISG+I+++E
Sbjct: 1414 KEFPAGKLVHGRVLSVDPASKRVEVTLKTEMKTEVAKSDASVFCNLHVGDVISGQIRRIE 1473
Query: 418 TYGLCITIDQTNMVGLC 468
YGL I ID TN+VGLC
Sbjct: 1474 PYGLFIAIDNTNVVGLC 1490
Score = 48.9 bits (115), Expect(3) = 3e-39
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGD 607
++L DE +NI +Y+AG++V AKVLK D ERH+IS GMK IG+
Sbjct: 1493 SELSDEPIDNIETRYKAGDRVVAKVLK-VDEERHRISLGMKKSYIGN 1538
Score = 31.6 bits (70), Expect(3) = 3e-39
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDT 91
GT HVDLSLR+SLQD ++ D+
Sbjct: 1329 GTLHVDLSLRSSLQDIQSVDS 1349
Score = 57.8 bits (138), Expect(2) = 9e-14
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV E+ D+KPL G + + E F KFK+GQ+L ARIVAK
Sbjct: 1060 LVVGEIIDIKPLELILKFGTGFRGRIHITEVFDNNHAPENPFSKFKIGQLLDARIVAKLE 1119
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
S K GK Q ELS+ PS+++G E + E +FS+G+++ G V++
Sbjct: 1120 QSGKSGKGYQWELSVRPSLLTG--ESMKIPTAEEFNFSVGSIVRGYVVK 1166
Score = 48.9 bits (115), Expect(2) = 9e-14
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Frame = +1
Query: 1582 WVWC*GGQ*LGLVNSISSHDGEAISSRQCDRTFKTS**KRFPVGKGVTGHILSVH*EKNL 1761
WVW L + S+ SH SS C+ +R+ VG+ V G I+S++ EK L
Sbjct: 1171 WVW------LTVSRSVMSHIFVLDSS--CEPGELQEFQQRYSVGQAVKGKIISINKEKKL 1222
Query: 1762 IRLILHPLSSVSKGTLD-----IGALEN------VSEHIHEGDVRAGRIK---------- 1878
+RL P SSVS ++D + EN +EHI GD+ G++K
Sbjct: 1223 LRLASCPSSSVSGSSVDHEIVKVDIQENKVSNVDCAEHIIRGDIVGGKVKRILPGVSGLL 1282
Query: 1879 --------GSFY*TYR*LDA---KPASWI*EGQFVKYKVVEIGRS 1980
G + T +D +P EGQFVK K++EI RS
Sbjct: 1283 VQIGPHLFGKAHYT-ELIDTWVPQPLCGYHEGQFVKCKILEITRS 1326
>ref|XP_012090853.1| PREDICTED: protein RRP5 homolog [Jatropha curcas]
gi|643705360|gb|KDP21906.1| hypothetical protein
JCGZ_03044 [Jatropha curcas]
Length = 1928
Score = 134 bits (338), Expect(3) = 3e-39
Identities = 70/134 (52%), Positives = 94/134 (70%), Gaps = 14/134 (10%)
Frame = +1
Query: 109 EDSIKRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT---------AF 246
+ S + E+IE++HPN +VQGYVKN+ +KGCF K + L L+ F
Sbjct: 1356 DTSTEHVEKIEDLHPNTIVQGYVKNVTTKGCFIMLSRKIDAKILLSNLSDEYIENPEKEF 1415
Query: 247 PVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQVETYG 426
P+GKL+IG+VLSVEPLSKRVEV+LK S+ ++ + P D LH+GD+I+GRIK+VE+YG
Sbjct: 1416 PIGKLVIGRVLSVEPLSKRVEVTLKKSSSRNAAISGPNDWSTLHVGDIIAGRIKRVESYG 1475
Query: 427 LCITIDQTNMVGLC 468
L ITID TN+VGLC
Sbjct: 1476 LFITIDHTNLVGLC 1489
Score = 56.6 bits (135), Expect(3) = 3e-39
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDV-----HDDASA 631
++L ++H +NI KYRAGEKV ++LK D ERH++S GMKNL G+D+ +++
Sbjct: 1492 SELSEDHVDNIETKYRAGEKVTVRILK-VDEERHRVSLGMKNLDNGNDMSRLPSKEESDE 1550
Query: 632 DLTLNQDRGVYADSGSDSDSS 694
D++ N DSGS S
Sbjct: 1551 DISEND---AADDSGSKRHES 1568
Score = 21.6 bits (44), Expect(3) = 3e-39
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 32 TTHVDLSLRASL 67
T H+DLSLR SL
Sbjct: 1329 TIHIDLSLRFSL 1340
Score = 79.3 bits (194), Expect = 1e-11
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 35/241 (14%)
Frame = +2
Query: 1322 EWRLKFGVSFHGRVHITEIASVGCI**IQSWANVDS*NCCKAWCV----R*EGQKDPIGA 1489
E RLKFG+ F GR+HITE+ + C+ +AN A V + E +K +
Sbjct: 1075 EMRLKFGIGFRGRIHITEVNN-DCVL-EDPFANFRIGQTVTARIVAKASKVENKKSNLWE 1132
Query: 1490 LHLT---VNDFRTQRNRE*ADVPGV*FFNWKRITGYGVKVDNDWVWLIVSRHMMAKLSLL 1660
L + + D+ ++ ++ + F + + +TGY KVD++W WL +SRH+ A+L +L
Sbjct: 1133 LSIKPKILTDYNEPADKLVSEE--LEFSSGRCVTGYVYKVDSEWAWLAISRHVNAQLFIL 1190
Query: 1661 DNAIEPSKLRD-RSVFLLGRV*PVTF*VFTRR----RI*YA*FCTPYHPS---------- 1795
D+A EPS+L++ + FL+G+ + + R+ C H
Sbjct: 1191 DSAREPSELQEFQKRFLVGKAVSGNILSYNKEKSLLRLVLRPLCDSTHDGKALNKDNVNN 1250
Query: 1796 -PKELLIL------VLLRMLANIYMKVMSVLVEL------KVHFTELTDSWMPNPLLGFR 1936
P++ + V+ +A I + +LV++ +VHFT+L DSW+P+PL G+
Sbjct: 1251 VPRDTASVHIHEGDVIGGRIAKILPNIGGLLVQIGPHLHGRVHFTDLQDSWVPDPLSGYH 1310
Query: 1937 K 1939
+
Sbjct: 1311 E 1311
>ref|XP_010934562.1| PREDICTED: protein RRP5 homolog isoform X2 [Elaeis guineensis]
Length = 1928
Score = 132 bits (332), Expect(3) = 3e-39
Identities = 71/137 (51%), Positives = 92/137 (67%), Gaps = 14/137 (10%)
Frame = +1
Query: 100 HNDEDSIKRFERIEEIHPNMVVQGYVKNLMSKGCFKTYQT-----VSLKTLT-------- 240
+N I+RFE+IE++HPNM VQGYVKN+ SKGCF + L L+
Sbjct: 1352 NNLNTHIQRFEKIEDLHPNMDVQGYVKNVTSKGCFIMLSRMIDARILLSNLSDGYIENPE 1411
Query: 241 -AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQVE 417
FP GKL+ G+VLSV+P SKRVEV+LKT + +K+D CNLH+GDVISG+I+++E
Sbjct: 1412 KEFPAGKLVHGRVLSVDPASKRVEVTLKTEMKTEVAKSDASVFCNLHVGDVISGQIRRIE 1471
Query: 418 TYGLCITIDQTNMVGLC 468
YGL I ID TN+VGLC
Sbjct: 1472 PYGLFIAIDNTNVVGLC 1488
Score = 48.9 bits (115), Expect(3) = 3e-39
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGD 607
++L DE +NI +Y+AG++V AKVLK D ERH+IS GMK IG+
Sbjct: 1491 SELSDEPIDNIETRYKAGDRVVAKVLK-VDEERHRISLGMKKSYIGN 1536
Score = 31.6 bits (70), Expect(3) = 3e-39
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDT 91
GT HVDLSLR+SLQD ++ D+
Sbjct: 1327 GTLHVDLSLRSSLQDIQSVDS 1347
Score = 57.8 bits (138), Expect(2) = 9e-14
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV E+ D+KPL G + + E F KFK+GQ+L ARIVAK
Sbjct: 1058 LVVGEIIDIKPLELILKFGTGFRGRIHITEVFDNNHAPENPFSKFKIGQLLDARIVAKLE 1117
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
S K GK Q ELS+ PS+++G E + E +FS+G+++ G V++
Sbjct: 1118 QSGKSGKGYQWELSVRPSLLTG--ESMKIPTAEEFNFSVGSIVRGYVVK 1164
Score = 48.9 bits (115), Expect(2) = 9e-14
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 32/165 (19%)
Frame = +1
Query: 1582 WVWC*GGQ*LGLVNSISSHDGEAISSRQCDRTFKTS**KRFPVGKGVTGHILSVH*EKNL 1761
WVW L + S+ SH SS C+ +R+ VG+ V G I+S++ EK L
Sbjct: 1169 WVW------LTVSRSVMSHIFVLDSS--CEPGELQEFQQRYSVGQAVKGKIISINKEKKL 1220
Query: 1762 IRLILHPLSSVSKGTLD-----IGALEN------VSEHIHEGDVRAGRIK---------- 1878
+RL P SSVS ++D + EN +EHI GD+ G++K
Sbjct: 1221 LRLASCPSSSVSGSSVDHEIVKVDIQENKVSNVDCAEHIIRGDIVGGKVKRILPGVSGLL 1280
Query: 1879 --------GSFY*TYR*LDA---KPASWI*EGQFVKYKVVEIGRS 1980
G + T +D +P EGQFVK K++EI RS
Sbjct: 1281 VQIGPHLFGKAHYT-ELIDTWVPQPLCGYHEGQFVKCKILEITRS 1324
>ref|XP_008789163.1| PREDICTED: protein RRP5 homolog [Phoenix dactylifera]
Length = 1922
Score = 130 bits (328), Expect(3) = 1e-38
Identities = 70/137 (51%), Positives = 91/137 (66%), Gaps = 14/137 (10%)
Frame = +1
Query: 100 HNDEDSIKRFERIEEIHPNMVVQGYVKNLMSKGCFKTYQT-----VSLKTLT-------- 240
+N IKRFE+IE++HPNM VQGYVK++ SKGCF + L L+
Sbjct: 1352 NNLNTHIKRFEKIEDLHPNMDVQGYVKSVTSKGCFIMLSRMIDARILLSNLSDGYIENPE 1411
Query: 241 -AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQVE 417
FP GKL+ G+VLSV+P SKRVEV+LKT + +K+DP CNLH+ D+ISG+I++ E
Sbjct: 1412 KEFPAGKLVHGRVLSVDPASKRVEVTLKTDMKTEVAKSDPGVFCNLHVSDIISGQIRRTE 1471
Query: 418 TYGLCITIDQTNMVGLC 468
YGL I ID TN+VGLC
Sbjct: 1472 PYGLFIAIDNTNVVGLC 1488
Score = 49.7 bits (117), Expect(3) = 1e-38
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGD--DVH-------D 619
++L DE +NI +Y+AG++V A VLK D ERH+IS GMK G+ DVH D
Sbjct: 1491 SELSDEPIDNIETRYKAGDRVVATVLK-VDEERHRISLGMKKSYFGNASDVHIISNHGTD 1549
Query: 620 DASADLTL 643
D S D TL
Sbjct: 1550 DDSVDGTL 1557
Score = 30.4 bits (67), Expect(3) = 1e-38
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSET 82
GT HVDLSLR+SLQD ++
Sbjct: 1327 GTAHVDLSLRSSLQDIQS 1344
Score = 63.2 bits (152), Expect = 9e-07
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLSGV*SLES-----VSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV AE+ D+KPL + + + + E + F KFK+GQ+L ARIVAKP
Sbjct: 1058 LVAAEIIDIKPLELILKFGTGFHGRIHITEVFDNNHDMENPFSKFKIGQLLDARIVAKPE 1117
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
S K GK + ELS+ PS+++G E + E +FS+G+++ G V++
Sbjct: 1118 QSGKSGKGYRWELSVRPSLLTG--ESTKIPTAEEFNFSVGSIVKGYVVK 1164
>ref|XP_011039519.1| PREDICTED: protein RRP5 homolog [Populus euphratica]
Length = 1938
Score = 130 bits (327), Expect(3) = 7e-38
Identities = 73/140 (52%), Positives = 98/140 (70%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDS-IKRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLTA---- 243
E N++D+ KR ++IE++ P+MVVQGYVKN+ SKGCF K + L L+
Sbjct: 1363 EFSNNQDAPSKRVDKIEDLQPDMVVQGYVKNVSSKGCFISLSRKLDAKILLSNLSEGYID 1422
Query: 244 -----FPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKLL G+VLSVE LSKR+EV+LK+ SAS SK++ D LH+G++ISGRIK
Sbjct: 1423 DPEKQFPIGKLLTGRVLSVEHLSKRIEVTLKS-SASNMSKSENSDLSRLHVGEIISGRIK 1481
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL I +D TN+VGLC
Sbjct: 1482 RVESYGLFIALDHTNLVGLC 1501
Score = 53.1 bits (126), Expect(3) = 7e-38
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +2
Query: 482 EHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDVHDDASADLTLNQDRGV 661
+H NI KY+AGEKV AK+LK D ER +IS GMKNL + DD++ D +
Sbjct: 1508 DHIGNIESKYKAGEKVTAKILK-VDEERRRISLGMKNLDVRDDMNSSKE-----ESDEEM 1561
Query: 662 YADSGSDSDSSQMRQVID--IRGHLFLDENCTNSAS 763
+ D ++Q++ + + + G +D C N S
Sbjct: 1562 SENESVDGSNAQIKIIPESSLLGIHNIDVECQNEHS 1597
Score = 24.6 bits (52), Expect(3) = 7e-38
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTLNF 100
GT H+DLSLR SL +++ F
Sbjct: 1341 GTIHIDLSLRLSLDGMLGQNSAEF 1364
Score = 57.8 bits (138), Expect(2) = 2e-14
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV+AE+T++KPL G+ + + E + + F F+VGQ ++ARI+AK G
Sbjct: 1073 LVQAEITEIKPLEMRLKFGIGFRGRIHITE-VSDTCLLENPFSNFRVGQTVSARIIAKAG 1131
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
SD K ++ +LSI P M+ IE+KL+ +E +FS G + G V +
Sbjct: 1132 QSDNKKSQLW-DLSIKPKMLEDSCMIEDKLVPKEYEFSSGQHISGYVYK 1179
Score = 51.2 bits (121), Expect(2) = 2e-14
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 31/123 (25%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVSKGTLDIGA-----------LENVSEH 1842
KRF VGK VTGH+L+ + EK +RL L P ++ S+ +D GA +NV+ H
Sbjct: 1214 KRFYVGKAVTGHVLNYNKEKASLRLALRPFAA-SQTLVDGGAPIMDDLQSNAPWDNVTAH 1272
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
I EGD+ GRI + F P S EGQFVK KV
Sbjct: 1273 IREGDIVGGRISKILPGVGGLLVQLGPHIHGRVHFTELQDSWVPDPLSAYKEGQFVKSKV 1332
Query: 1963 VEI 1971
+EI
Sbjct: 1333 LEI 1335
>ref|XP_002322744.2| hypothetical protein POPTR_0016s06250g [Populus trichocarpa]
gi|550320958|gb|EEF04505.2| hypothetical protein
POPTR_0016s06250g [Populus trichocarpa]
Length = 1856
Score = 130 bits (326), Expect(3) = 1e-37
Identities = 70/140 (50%), Positives = 95/140 (67%), Gaps = 15/140 (10%)
Frame = +1
Query: 94 ELHNDEDS-IKRFERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLTA---- 243
E N++D+ K ++IE++ P+MVVQGYVKN+ SKGCF K + L L+
Sbjct: 1280 EFSNNQDAPSKHVDKIEDLQPDMVVQGYVKNVSSKGCFISLSRKLDAKILLSNLSEGYID 1339
Query: 244 -----FPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIK 408
FP+GKLL G+VLSVE LSKR+EV+LK S +SK++ D LH+G++ISGRIK
Sbjct: 1340 DPEKEFPIGKLLTGRVLSVEHLSKRIEVTLKKSGVSNASKSENSDLSRLHVGEIISGRIK 1399
Query: 409 QVETYGLCITIDQTNMVGLC 468
+VE+YGL I +D TN+VGLC
Sbjct: 1400 RVESYGLFIALDHTNLVGLC 1419
Score = 52.8 bits (125), Expect(3) = 1e-37
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = +2
Query: 482 EHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDVHDDASADLTLNQDRGV 661
+H NI KY+AGEKV AK+LK D ER +IS GMKNL + DD++ D
Sbjct: 1426 DHIGNIESKYKAGEKVTAKILK-VDEERRRISLGMKNLDVRDDMNSSKE-----ESDEEK 1479
Query: 662 YADSGSDSDSSQMRQVID--IRGHLFLDENCTNSAS 763
+ D ++Q++ + + + G +D C N S
Sbjct: 1480 SENESMDDSNAQIKIIPESSLLGIHNIDVECQNERS 1515
Score = 24.6 bits (52), Expect(3) = 1e-37
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSETRDTLNF 100
GT H+DLSLR SL +++ F
Sbjct: 1258 GTIHIDLSLRLSLNGMLGQNSAEF 1281
Score = 57.4 bits (137), Expect(2) = 3e-15
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV+AE+T++KPL G+ + + E + + F F+VGQ ++ARI+AK G
Sbjct: 990 LVQAEITEIKPLEMRLKFGIGFRGRIHITE-VNDTCLLENPFSNFRVGQTVSARIIAKAG 1048
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
SD K ++ +LSI P M+ IE+KL+ +E +FS G + G V +
Sbjct: 1049 QSDNKKSQLW-DLSIKPKMLEDSCMIEDKLVPKEYEFSSGQHVSGYVYK 1096
Score = 54.3 bits (129), Expect(2) = 3e-15
Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 31/123 (25%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPLSSVSKGTLDIGA-----------LENVSEH 1842
KRF VGK VTGH+L+ + EK +RL LHP ++ S+ +D GA +NV+ H
Sbjct: 1131 KRFYVGKAVTGHVLNYNKEKASLRLALHPFAA-SQTLVDGGAPIMDDLQGNAPWDNVTAH 1189
Query: 1843 IHEGDVRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKV 1962
I EGD+ GRI + F P S EGQFVK KV
Sbjct: 1190 IREGDIVGGRISKILPGVGGLLVQLGPHIHGRVHFTELQDSWVPDPLSAYKEGQFVKSKV 1249
Query: 1963 VEI 1971
+EI
Sbjct: 1250 LEI 1252
>ref|XP_010317858.1| PREDICTED: protein RRP5 homolog [Solanum lycopersicum]
Length = 1897
Score = 128 bits (321), Expect(3) = 2e-37
Identities = 73/138 (52%), Positives = 92/138 (66%), Gaps = 15/138 (10%)
Frame = +1
Query: 100 HNDEDSIKRF-ERIEEIHPNMVVQGYVKNLMSKGCF-----KTYQTVSLKTLT------- 240
HND + E+IE++ PNM+VQ YVKN+ KGCF K V L L+
Sbjct: 1318 HNDTVNFPVLVEKIEDLRPNMMVQAYVKNVSPKGCFVILSRKVDAKVLLSNLSDGYVENI 1377
Query: 241 --AFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDVISGRIKQV 414
FPVGKL+IG+V+SVEPLSKRVE++L+T SA + K+D NL +GDVISGRIK+V
Sbjct: 1378 EKGFPVGKLVIGRVVSVEPLSKRVEITLRTSSAVGAPKSDKDALSNLTVGDVISGRIKRV 1437
Query: 415 ETYGLCITIDQTNMVGLC 468
E YGL IT+D TN+VGLC
Sbjct: 1438 EPYGLFITVDHTNLVGLC 1455
Score = 54.7 bits (130), Expect(3) = 2e-37
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGD----DVHDDASAD 634
+++ D+H +NI+ +++AG++V AK+LK D ERH+IS GMKN I D + + S+
Sbjct: 1458 SEISDDHVDNIDSRHKAGDRVTAKILK-VDKERHRISLGMKNSYINDATSGETYARPSSG 1516
Query: 635 LTLNQDR---GVYADSGSDSDSSQMRQVID 715
+N D G+ + S +S SSQ R+ +D
Sbjct: 1517 HAVNGDALPIGIQSTSSPES-SSQGREDLD 1545
Score = 23.9 bits (50), Expect(3) = 2e-37
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSET------RDTLNF 100
GT H+DLSLR+ ++ DT+NF
Sbjct: 1295 GTVHIDLSLRSISHKTQKEKLSAHNDTVNF 1324
Score = 48.9 bits (115), Expect(2) = 2e-10
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Frame = +1
Query: 1696 KRFPVGKGVTGHILSVH*EKNLIRLILHPL------SSVSKGTLDIGALENVSEHIHEGD 1857
+RF VG+ +G++L + EK L+R+I HPL + G D + E+V+ HI EG
Sbjct: 1173 ERFSVGRAFSGYVLRCNKEKKLVRIISHPLLVDPETACQGDGPTDHSS-ESVAFHIREGS 1231
Query: 1858 VRAGRI--------------------KGSFY*TYR*LDAKPASWI*EGQFVKYKVVEIGR 1977
V GRI K F A P S EGQFVK KV+EI +
Sbjct: 1232 VLGGRISKILPGVGGLLVQIDPHLYGKVHFTELTDPGVADPLSGYHEGQFVKCKVLEIAQ 1291
Query: 1978 S 1980
S
Sbjct: 1292 S 1292
Score = 46.2 bits (108), Expect(2) = 2e-10
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Frame = +3
Query: 1287 LVEAEVTDMKPLS-----GV*SLESVSMEECI*QRLPVLGAFDKFKVGQMLTARIVAKPG 1451
LV+AE+T+++P+ G V + E F F+ GQ LTARI++K
Sbjct: 1034 LVQAEITEIRPIELRLKFGSSFHGRVHITEASDDNYAE-APFSNFRFGQTLTARIISKLN 1092
Query: 1452 VSDKKGKKIQ*ELSI*PSMISGPKEIENKLMSRESDFSIGNVLLGMVLR 1598
+S+ + Q ELSI PS ++G EIE ++ +S G ++ G V +
Sbjct: 1093 MSESVKRGYQWELSIKPSTLTGSDEIE---PDKKISYSTGQLVSGFVYK 1138
>emb|CDP14292.1| unnamed protein product [Coffea canephora]
Length = 1924
Score = 127 bits (318), Expect(3) = 3e-37
Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 16/146 (10%)
Frame = +1
Query: 79 DSGHF-ELHNDEDSIK-RFERIEEIHPNMVVQGYVKNLMSKGCF-KTYQTVSLKTL---- 237
D G F +L+ +SI R E IE++ P++VV+GYVKN+ S+GCF +TV K L
Sbjct: 1343 DHGKFADLYPSMNSISPRVENIEDLKPDIVVKGYVKNVSSRGCFIMISRTVDAKILLSNL 1402
Query: 238 ---------TAFPVGKLLIGKVLSVEPLSKRVEVSLKTGSASRSSKTDPCDSCNLHLGDV 390
T FPVGKL+IG+V+SVEPLSKRVEV+LKT ++ SK D L +GD
Sbjct: 1403 SDGFVENPETEFPVGKLVIGRVISVEPLSKRVEVTLKTSNSVSVSKLDVNSLNKLTVGDF 1462
Query: 391 ISGRIKQVETYGLCITIDQTNMVGLC 468
ISGR+K++E+YGL +TID TN+VGLC
Sbjct: 1463 ISGRVKRIESYGLFVTIDDTNLVGLC 1488
Score = 54.7 bits (130), Expect(3) = 3e-37
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +2
Query: 467 AKLGDEHTENINCKYRAGEKVKAKVLKQADPERHQISPGMKNLIIGDDVHDDASADLTLN 646
++L DEH +NI K++AGE V+AKVLK D ERH+I+ GMKN D +D ++ N
Sbjct: 1491 SELSDEHIDNIETKHKAGEVVRAKVLK-VDKERHRIALGMKNSYFTGDTNDQKLSEHGTN 1549
Query: 647 ---QDRGVYADSGSDS 685
++ V+ +G+ S
Sbjct: 1550 SAIEENHVFEGTGAIS 1565
Score = 24.3 bits (51), Expect(3) = 3e-37
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 29 GTTHVDLSLRASLQDSE 79
GT HVDLSLR + D +
Sbjct: 1327 GTVHVDLSLRLTSDDMD 1343