BLASTX nr result
ID: Papaver31_contig00024494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00024494
(1088 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010246904.1| PREDICTED: mediator of RNA polymerase II tra... 457 e-126
ref|XP_010246903.1| PREDICTED: mediator of RNA polymerase II tra... 457 e-126
ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II tra... 439 e-120
ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citr... 437 e-120
ref|XP_002274655.1| PREDICTED: mediator of RNA polymerase II tra... 435 e-119
ref|XP_010109187.1| hypothetical protein L484_002225 [Morus nota... 432 e-118
ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prun... 426 e-116
ref|XP_012074325.1| PREDICTED: mediator of RNA polymerase II tra... 424 e-116
ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II tra... 423 e-115
ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Popu... 419 e-114
ref|XP_011042601.1| PREDICTED: mediator of RNA polymerase II tra... 418 e-114
ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II tra... 417 e-114
ref|XP_002532550.1| conserved hypothetical protein [Ricinus comm... 413 e-112
ref|XP_009626583.1| PREDICTED: mediator of RNA polymerase II tra... 410 e-111
ref|XP_009776105.1| PREDICTED: mediator of RNA polymerase II tra... 407 e-111
ref|XP_008442914.1| PREDICTED: mediator of RNA polymerase II tra... 407 e-111
ref|XP_012468126.1| PREDICTED: mediator of RNA polymerase II tra... 406 e-110
ref|XP_012468122.1| PREDICTED: mediator of RNA polymerase II tra... 406 e-110
ref|XP_012468123.1| PREDICTED: mediator of RNA polymerase II tra... 406 e-110
ref|XP_012468124.1| PREDICTED: mediator of RNA polymerase II tra... 406 e-110
>ref|XP_010246904.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Nelumbo nucifera]
Length = 377
Score = 457 bits (1175), Expect = e-126
Identities = 236/346 (68%), Positives = 276/346 (79%), Gaps = 10/346 (2%)
Frame = -2
Query: 1009 LQQQPST--IANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEAL 836
+QQQP + Q + +++ E+TAEAPPKQVALAMERL AARLIADVRLGADR+LEAL
Sbjct: 1 MQQQPQAPVASATQPDQLESCETTAEAPPKQVALAMERLGQAARLIADVRLGADRLLEAL 60
Query: 835 FVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPL 656
F+AAQPHQ+NKPLHLI+NEEA+MR+HLQDLR VG+QLEESGVLN SL+SR+NSWGLHMPL
Sbjct: 61 FIAAQPHQSNKPLHLIVNEEATMRQHLQDLRAVGRQLEESGVLN-SLRSRNNSWGLHMPL 119
Query: 655 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXX 476
VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQ++RFFPHL
Sbjct: 120 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQRRRFFPHLEDESSGQTSGVESG 179
Query: 475 XSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLT 296
SK+ C +S L HKEE SE +KTL +VL R++K+APN+R+FTY+ LDWLKRAS+L+
Sbjct: 180 VSKKHCSSQASTLTHKEEPSE---EKTLPEVLLRVEKEAPNMRIFTYQHLDWLKRASALS 236
Query: 295 SSSNENPVDKQDRQN--------TGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVP 140
SS+NEN ++ N TGSLG ADQ A +EL +PSVFRA++SLHPAGS+ P
Sbjct: 237 SSTNENFIESSKENNFQTSNRLRTGSLGPVSADQIAAVELLVPSVFRAIISLHPAGSIEP 296
Query: 139 DAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
DAVAFFSPDE GSYIH+RGFS YHVFRHLTEHA +ALQ FLG D
Sbjct: 297 DAVAFFSPDEGGSYIHSRGFSVYHVFRHLTEHAVKALQFFLGINTD 342
>ref|XP_010246903.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Nelumbo nucifera]
Length = 424
Score = 457 bits (1175), Expect = e-126
Identities = 236/346 (68%), Positives = 276/346 (79%), Gaps = 10/346 (2%)
Frame = -2
Query: 1009 LQQQPST--IANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEAL 836
+QQQP + Q + +++ E+TAEAPPKQVALAMERL AARLIADVRLGADR+LEAL
Sbjct: 1 MQQQPQAPVASATQPDQLESCETTAEAPPKQVALAMERLGQAARLIADVRLGADRLLEAL 60
Query: 835 FVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPL 656
F+AAQPHQ+NKPLHLI+NEEA+MR+HLQDLR VG+QLEESGVLN SL+SR+NSWGLHMPL
Sbjct: 61 FIAAQPHQSNKPLHLIVNEEATMRQHLQDLRAVGRQLEESGVLN-SLRSRNNSWGLHMPL 119
Query: 655 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXX 476
VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQ++RFFPHL
Sbjct: 120 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQRRRFFPHLEDESSGQTSGVESG 179
Query: 475 XSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLT 296
SK+ C +S L HKEE SE +KTL +VL R++K+APN+R+FTY+ LDWLKRAS+L+
Sbjct: 180 VSKKHCSSQASTLTHKEEPSE---EKTLPEVLLRVEKEAPNMRIFTYQHLDWLKRASALS 236
Query: 295 SSSNENPVDKQDRQN--------TGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVP 140
SS+NEN ++ N TGSLG ADQ A +EL +PSVFRA++SLHPAGS+ P
Sbjct: 237 SSTNENFIESSKENNFQTSNRLRTGSLGPVSADQIAAVELLVPSVFRAIISLHPAGSIEP 296
Query: 139 DAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
DAVAFFSPDE GSYIH+RGFS YHVFRHLTEHA +ALQ FLG D
Sbjct: 297 DAVAFFSPDEGGSYIHSRGFSVYHVFRHLTEHAVKALQFFLGINTD 342
>ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Citrus sinensis]
Length = 441
Score = 439 bits (1129), Expect = e-120
Identities = 227/358 (63%), Positives = 270/358 (75%), Gaps = 8/358 (2%)
Frame = -2
Query: 1051 TPPLPENEERVRKMLQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIAD 872
TP P+ + + ++ QQ+ +AN +ST EAPPKQVALA+ERL+ A RLIAD
Sbjct: 7 TPTQPQPQPQQQQQQQQESQALANPNASPDQPPQSTTEAPPKQVALALERLAQAGRLIAD 66
Query: 871 VRLGADRILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLK 692
VRLGADR+LEALFVAAQPHQ+NKPLHL + E+A+MR+HLQDLR++G+QLEE+GVLNE L+
Sbjct: 67 VRLGADRLLEALFVAAQPHQSNKPLHLFIKEDAAMRQHLQDLRSIGRQLEETGVLNEPLR 126
Query: 691 SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXX 512
SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHL
Sbjct: 127 SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHL-- 184
Query: 511 XXXXXXXXXXXXXSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYR 332
SK+ C P + ++E ELSD KTLSDVL RL+K+ PN+++FTY
Sbjct: 185 -DDRVHDQSTEPESKKHCVPQALPASNQE---ELSDCKTLSDVLMRLEKEVPNLKIFTYE 240
Query: 331 RLDWLKRASSLTSSSNENPVDKQDRQN--------TGSLGDAVADQAAVIELFLPSVFRA 176
RLDWLKRASSL SS+NE+P++ N G AD+ +VIEL PS+FRA
Sbjct: 241 RLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADKVSVIELLFPSIFRA 300
Query: 175 VVSLHPAGSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
+VSLHP G++ PDAVAFFSPDE G+YIHARG S YHVFRH+TEHA ALQ FLG R +
Sbjct: 301 IVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTE 358
>ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citrus clementina]
gi|557532125|gb|ESR43308.1| hypothetical protein
CICLE_v10011749mg [Citrus clementina]
Length = 438
Score = 437 bits (1123), Expect = e-120
Identities = 230/361 (63%), Positives = 269/361 (74%), Gaps = 8/361 (2%)
Frame = -2
Query: 1060 ETSTPPLPENEERVRKMLQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARL 881
+T T P P+ + + QQ+ +AN +STAEAPPKQVALA+ERL+ A RL
Sbjct: 6 QTPTQPQPQPQPQ-----QQESQALANPNASPDQPPQSTAEAPPKQVALALERLAQAGRL 60
Query: 880 IADVRLGADRILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNE 701
IADVRLGADR+LEALFVAAQPHQ+NKPLHL + E+A+MR+HLQDLR +G+QLE +GVLNE
Sbjct: 61 IADVRLGADRLLEALFVAAQPHQSNKPLHLFIKEDAAMRQHLQDLRTIGRQLEGTGVLNE 120
Query: 700 SLKSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPH 521
L+SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPH
Sbjct: 121 PLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPH 180
Query: 520 LXXXXXXXXXXXXXXXSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVF 341
L SK+ C P + ++E ELSD KTLSDVL RL+K+ PN+++F
Sbjct: 181 L---DDRVHDQSTEPESKKHCVPQALPASNQE---ELSDCKTLSDVLMRLEKEVPNLKIF 234
Query: 340 TYRRLDWLKRASSLTSSSNENPVDKQDRQN--------TGSLGDAVADQAAVIELFLPSV 185
TY RLDWLKRASSL SS+NE+P++ N G AD+ AVIEL PS+
Sbjct: 235 TYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADKVAVIELLFPSI 294
Query: 184 FRAVVSLHPAGSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRP 5
FRA+VSLHP GS+ PDAVAFFSPDE G+YIHARG S YHVFRH+TEHA ALQ FLG R
Sbjct: 295 FRAIVSLHPVGSIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRT 354
Query: 4 D 2
+
Sbjct: 355 E 355
>ref|XP_002274655.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Vitis vinifera]
gi|731398192|ref|XP_010653171.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 27 isoform X1
[Vitis vinifera] gi|296085885|emb|CBI31209.3| unnamed
protein product [Vitis vinifera]
Length = 419
Score = 435 bits (1119), Expect = e-119
Identities = 227/344 (65%), Positives = 264/344 (76%), Gaps = 8/344 (2%)
Frame = -2
Query: 1009 LQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
+QQQ T Q + ESTAEAPPKQVALAM+RL+ AARLIADVRLGADR+LEALFV
Sbjct: 1 MQQQQQT---QAARNPTSAESTAEAPPKQVALAMDRLAQAARLIADVRLGADRLLEALFV 57
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
+AQPHQT KPLHL L E++SMR+HLQDLR +GKQLE+SGVLNESL+SRSNSWGLHMPLVC
Sbjct: 58 SAQPHQTTKPLHLFLKEDSSMRQHLQDLRTIGKQLEDSGVLNESLRSRSNSWGLHMPLVC 117
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 118 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL-DDGLNGQSSASESVP 176
Query: 469 KRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTSS 290
K+ CG S + +E ELSD +TLSDVL ++K PN+++FTY+RLDWLKRAS+L S
Sbjct: 177 KKHCGSQISTVTQQE---ELSDYRTLSDVLMHVEKDMPNMKIFTYQRLDWLKRASTLPCS 233
Query: 289 SNENPVDK--------QDRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVPDA 134
+ E +D ++ G LG AD+ AVIEL PS+FRA++SLHPAGS+ PDA
Sbjct: 234 AEEFLMDSSKEHDFHISNKPRLGLLGAVAADKVAVIELLFPSIFRAIISLHPAGSIDPDA 293
Query: 133 VAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
VAFFSPDE GSY+HARGFS YHVF+H+TEHAA ALQ FLGT +
Sbjct: 294 VAFFSPDEGGSYVHARGFSVYHVFKHVTEHAAMALQHFLGTNTE 337
>ref|XP_010109187.1| hypothetical protein L484_002225 [Morus notabilis]
gi|587934286|gb|EXC21215.1| hypothetical protein
L484_002225 [Morus notabilis]
Length = 393
Score = 432 bits (1110), Expect = e-118
Identities = 232/344 (67%), Positives = 266/344 (77%), Gaps = 13/344 (3%)
Frame = -2
Query: 1006 QQQPSTIANQQQETMDTVE----STAEAPPKQVALAMERLSSAARLIADVRLGADRILEA 839
QQ P+ A Q + + STAEAPPKQVALAM+RLS AARLIAD+RLGADR+LEA
Sbjct: 5 QQNPAATAAIQNVAVQSNSAGGSSTAEAPPKQVALAMDRLSHAARLIADIRLGADRLLEA 64
Query: 838 LFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMP 659
LFVAAQPHQ+NKP+ L NE+ASMR+HLQDLR++GKQLEESGVL+ESL+SRSNSWGLHMP
Sbjct: 65 LFVAAQPHQSNKPVKLFPNEDASMRQHLQDLRSIGKQLEESGVLSESLRSRSNSWGLHMP 124
Query: 658 LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXX 479
LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 125 LVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL-------DEDLNG 177
Query: 478 XXSKRQCGPHSSVLGHKEELSE-LSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASS 302
S+ H S+ +E E LSD KTL DVLTRL+K+ PNV++ TY RLDW KRASS
Sbjct: 178 QDSEPNVKKHRSLQVVRETREEDLSDCKTLLDVLTRLEKEVPNVKIVTYERLDWSKRASS 237
Query: 301 LTSSSNENPVD--------KQDRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSV 146
L SS+NENP++ +R SLG+A D+AAVIELF PS+FRA+VSLHPAGS+
Sbjct: 238 LPSSANENPMEALKEHNFHTSNRMKPVSLGNAAPDKAAVIELFFPSIFRAIVSLHPAGSI 297
Query: 145 VPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
PDAVAFFSPDE GSY+HARG S YHVF+H+TEHA ALQ FLG
Sbjct: 298 DPDAVAFFSPDEGGSYMHARGVSVYHVFKHITEHAVMALQSFLG 341
>ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prunus persica]
gi|462397702|gb|EMJ03370.1| hypothetical protein
PRUPE_ppa006482mg [Prunus persica]
Length = 409
Score = 426 bits (1095), Expect = e-116
Identities = 231/346 (66%), Positives = 261/346 (75%), Gaps = 9/346 (2%)
Frame = -2
Query: 1012 MLQQQP-STIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEAL 836
M QQQP +TI N + +TAEAPPKQVALAMERLS A RLIAD+RLGADR+LEAL
Sbjct: 1 MQQQQPQATIQNHTSPSSSAGPTTAEAPPKQVALAMERLSDAGRLIADIRLGADRLLEAL 60
Query: 835 FVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPL 656
FVAAQPHQ+ KPLHL LNE+ASMR+HL DLR+VG+QLEESGVLNESL+SRSNSWGLHMPL
Sbjct: 61 FVAAQPHQSTKPLHLFLNEDASMRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPL 120
Query: 655 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXX 476
VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 121 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DEGSSGQSNES 177
Query: 475 XSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLT 296
+K+QC +EE E KTLS+VL RL+K PN+++FTY RLDWLKRASSL
Sbjct: 178 ATKKQCVSPVPAAHDQEEALEC---KTLSEVLARLEK-VPNLKIFTYERLDWLKRASSL- 232
Query: 295 SSSNENPVD--------KQDRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVP 140
NE+P + + G LGD D+ AVIEL PS+FRAVVSLHPAGS P
Sbjct: 233 -PENESPSETLKDHNFHSSSKLRAGPLGDVAPDKVAVIELLFPSLFRAVVSLHPAGSTDP 291
Query: 139 DAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
DAVAFFSPDE GSYIHARGFS YHV++H+TEHAA ALQ F+G R +
Sbjct: 292 DAVAFFSPDEGGSYIHARGFSIYHVYKHITEHAAMALQYFIGVRAE 337
>ref|XP_012074325.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Jatropha curcas] gi|643727826|gb|KDP36119.1|
hypothetical protein JCGZ_08763 [Jatropha curcas]
Length = 438
Score = 424 bits (1091), Expect = e-116
Identities = 224/347 (64%), Positives = 266/347 (76%), Gaps = 8/347 (2%)
Frame = -2
Query: 1030 EERVRKMLQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADR 851
+++ +++ + QP I N Q S A+APPKQVA+AM+RL+ AARLIADVRLGADR
Sbjct: 8 QQQQQQLQEPQPVGIQNSNQV------SPADAPPKQVAMAMDRLAQAARLIADVRLGADR 61
Query: 850 ILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWG 671
ILEALF+ AQPHQ+NKPL L E+ +MR+HL++LR+VG+QLEESGVLN+SL+SRSNSWG
Sbjct: 62 ILEALFITAQPHQSNKPLQLFRKEDTAMRQHLEELRSVGRQLEESGVLNDSLRSRSNSWG 121
Query: 670 LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXX 491
LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 122 LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DDGLDG 178
Query: 490 XXXXXXSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKR 311
KR C S VL + +LSD KTLSD+L R++K+ PN++VFTY RLDWLKR
Sbjct: 179 QSAESMPKRHCS--SQVLSAALQ-EDLSDCKTLSDILVRVEKEMPNLKVFTYERLDWLKR 235
Query: 310 ASSLTSSSNENPVDKQ--------DRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPA 155
ASSL +S+NENP++ ++ TGS G + +D+ AVIEL PSVFRA+VSLHPA
Sbjct: 236 ASSLPTSANENPMETSKEHTFHTLNKLRTGSQGSSTSDKVAVIELLFPSVFRAIVSLHPA 295
Query: 154 GSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
GS+ PDAVAFFSPDE GSYIHARGFS YHVFR TEHA ALQ FLG
Sbjct: 296 GSIDPDAVAFFSPDEGGSYIHARGFSVYHVFRQTTEHATMALQHFLG 342
>ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Prunus mume]
Length = 409
Score = 423 bits (1088), Expect = e-115
Identities = 229/346 (66%), Positives = 261/346 (75%), Gaps = 9/346 (2%)
Frame = -2
Query: 1012 MLQQQP-STIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEAL 836
M QQQP +TI N + +TAEAPPK+VALAMERLS A RLIAD+RLGADR+LEAL
Sbjct: 1 MQQQQPQATIQNHTPPSSSAGPTTAEAPPKRVALAMERLSDAGRLIADIRLGADRLLEAL 60
Query: 835 FVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPL 656
FVAAQPHQ+ KPLHL LNE+ASMR+HL DLR+VG+QLEESGVLNESL+SRSNSWGLHMPL
Sbjct: 61 FVAAQPHQSTKPLHLFLNEDASMRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPL 120
Query: 655 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXX 476
VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 121 VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DEGSSGQSNES 177
Query: 475 XSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLT 296
+K+QC +EE E KTLS+VL RL+K PN+++FTY RLDWLKRASSL
Sbjct: 178 ATKKQCVSPVPAAHDQEEALEC---KTLSEVLARLEK-VPNLKIFTYERLDWLKRASSL- 232
Query: 295 SSSNENPVD--------KQDRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVP 140
NE+P + + G LGD D+ AVIEL PS+FRAVVSLHPAGS P
Sbjct: 233 -PENESPSETLKDHNFHSSSKLRAGPLGDVAPDKVAVIELLFPSLFRAVVSLHPAGSTDP 291
Query: 139 DAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
DAVAFFSPDE GSY+HARGFS YHV++H+TEHAA ALQ F+G R +
Sbjct: 292 DAVAFFSPDEGGSYLHARGFSIYHVYKHITEHAAMALQYFIGVRAE 337
>ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Populus trichocarpa]
gi|550321025|gb|EEF05150.2| hypothetical protein
POPTR_0016s07140g [Populus trichocarpa]
Length = 436
Score = 419 bits (1077), Expect = e-114
Identities = 223/351 (63%), Positives = 267/351 (76%), Gaps = 8/351 (2%)
Frame = -2
Query: 1042 LPENEERVRKMLQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRL 863
+ + +++ + M Q+P A+Q +A+APPKQVALAMERL A+RLIADVRL
Sbjct: 10 IQQQQQQQQPMQLQEPPAAASQNPNP----PYSADAPPKQVALAMERLGQASRLIADVRL 65
Query: 862 GADRILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRS 683
GADR+LEALF+AA PHQ+NKPL L + E+ASMR+HLQDLR+VG+QLEESGVLNE+L+SRS
Sbjct: 66 GADRLLEALFIAAVPHQSNKPLQLFVKEDASMRQHLQDLRSVGRQLEESGVLNETLRSRS 125
Query: 682 NSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXX 503
NSWGLH+P+VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 126 NSWGLHLPVVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DE 182
Query: 502 XXXXXXXXXXSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLD 323
SK+ C P +L ++E ELSD KTLSDVLT L+K+ N++V TY RLD
Sbjct: 183 GQDVQSTEPASKKHCIPKDLLLNYQE---ELSDCKTLSDVLTCLEKEMLNLKVLTYERLD 239
Query: 322 WLKRASSLTSSSNENPVDKQ--------DRQNTGSLGDAVADQAAVIELFLPSVFRAVVS 167
W KRASSL +S++ENP+D + T S A D+ AVIELF PSVFRA++S
Sbjct: 240 WFKRASSLPASASENPLDTSKDHGFHSLSKLRTVSQSAAATDKIAVIELFFPSVFRAIIS 299
Query: 166 LHPAGSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
LHPAGS+ PDAVAFFSPDE GSYIHARGFS +HVFR ++EHAA ALQ FLG
Sbjct: 300 LHPAGSIDPDAVAFFSPDEGGSYIHARGFSVHHVFRKISEHAAMALQHFLG 350
>ref|XP_011042601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Populus euphratica]
Length = 433
Score = 418 bits (1075), Expect = e-114
Identities = 223/347 (64%), Positives = 266/347 (76%), Gaps = 8/347 (2%)
Frame = -2
Query: 1030 EERVRKMLQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADR 851
+++ + M Q+P A+Q S+A+APPKQVALAMERL A+RLIADVRLGADR
Sbjct: 11 QQQQQPMQLQEPHAAASQNPNP----PSSADAPPKQVALAMERLGQASRLIADVRLGADR 66
Query: 850 ILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWG 671
+LEALF+AA PHQ+NKPL L + E+ASMR+HLQDLR+VG+QLEESGVLNE+L+SRSNSWG
Sbjct: 67 LLEALFIAAVPHQSNKPLQLFVKEDASMRQHLQDLRSVGRQLEESGVLNETLRSRSNSWG 126
Query: 670 LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXX 491
LH+P+VCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 127 LHLPVVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DEGQDV 183
Query: 490 XXXXXXSKRQCGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKR 311
SK+ C P +L ++E ELSD KTLSDVLT L+K+ +++V TY RLDW KR
Sbjct: 184 QSTEPASKKHCIPKDLLLNYQE---ELSDCKTLSDVLTCLEKEMLSLKVLTYERLDWFKR 240
Query: 310 ASSLTSSSNENPVDKQ--------DRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPA 155
ASSL +S++ENP+D + T S A D+ AVIELF PSVFRA++SLHPA
Sbjct: 241 ASSLPASASENPLDASKDHGFHSLSKLRTVSQSAAATDKIAVIELFFPSVFRAIISLHPA 300
Query: 154 GSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
GS+ PDAVAFFSPDE GSYIHARGFS +HVFR ++EHAA ALQ FLG
Sbjct: 301 GSIDPDAVAFFSPDEGGSYIHARGFSVHHVFRKISEHAAMALQHFLG 347
>ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Fragaria vesca subsp. vesca]
Length = 408
Score = 417 bits (1073), Expect = e-114
Identities = 222/345 (64%), Positives = 262/345 (75%), Gaps = 9/345 (2%)
Frame = -2
Query: 1009 LQQQPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
+QQQP ++AEAPPKQVALAM+RL A RLIAD+RLGADR+LEA+FV
Sbjct: 1 MQQQPPPQTTTTPPPPSVGSTSAEAPPKQVALAMDRLGQAGRLIADIRLGADRLLEAMFV 60
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
AAQPHQ+ KPLHL LNE+ASMR+HLQDLR++G+QLEESGVLN++L+SRSNSWGLHMPLVC
Sbjct: 61 AAQPHQSTKPLHLFLNEDASMRQHLQDLRSIGRQLEESGVLNDALRSRSNSWGLHMPLVC 120
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAF+DQK+RFFPHL S
Sbjct: 121 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFSDQKRRFFPHL---DDGLDGQSDEPLS 177
Query: 469 KRQC-GPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTS 293
K+ C P SS H +E EL D KTLS++L L+K+ PN+++FTY RLDWLKRASSL
Sbjct: 178 KKPCVSPSSST--HNQE--ELLDCKTLSEILMSLEKKVPNLKIFTYERLDWLKRASSL-- 231
Query: 292 SSNENPVD--------KQDRQNTGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVPD 137
+NE+P++ + + SL D D+ AVIEL PSVFRAVVSLHPAGS+ PD
Sbjct: 232 PANESPLETVKDHNFHSSSKLRSTSLVDVATDKVAVIELLFPSVFRAVVSLHPAGSIDPD 291
Query: 136 AVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
AVAFFSP+E GSYIHARGFS YHVF+H+TEHA ALQ FLG + +
Sbjct: 292 AVAFFSPEEGGSYIHARGFSVYHVFKHITEHAGLALQYFLGVQAE 336
>ref|XP_002532550.1| conserved hypothetical protein [Ricinus communis]
gi|223527739|gb|EEF29844.1| conserved hypothetical
protein [Ricinus communis]
Length = 434
Score = 413 bits (1061), Expect = e-112
Identities = 224/357 (62%), Positives = 268/357 (75%), Gaps = 16/357 (4%)
Frame = -2
Query: 1024 RVRKMLQQQPSTIANQQQETMDTVESTA--EAPPKQVALAMERLSSAARLIADVRLGADR 851
++ ++Q QP QQQ+ E+ +APPKQVA+AM+RLS AARLIADVRLGADR
Sbjct: 4 KLNALMQPQPQPQPQQQQQPQPPQETPPADDAPPKQVAMAMDRLSQAARLIADVRLGADR 63
Query: 850 ILEALFVAAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWG 671
+LEALF++AQPHQ+ KPL L + E+A+MR+HLQDLR+VG+QLEESGVLN+SL+SRSNSWG
Sbjct: 64 LLEALFMSAQPHQSKKPLLLFIKEDAAMRQHLQDLRSVGRQLEESGVLNDSLRSRSNSWG 123
Query: 670 LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXX 491
LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 124 LHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL---DDGVDG 180
Query: 490 XXXXXXSKRQCG----PHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLD 323
SK+QC P ++L + ELSD KTLSDVLTRL+K+ PNV++ T+ RLD
Sbjct: 181 QNTESVSKKQCSLQVVPPVTLL-----VEELSDCKTLSDVLTRLEKEIPNVKISTFERLD 235
Query: 322 WLKRASSLTSSSNENPVDKQ--------DRQNTGSLG--DAVADQAAVIELFLPSVFRAV 173
WLKRASSL + +ENP++ ++ TGS D+ AVIEL PSVFRA+
Sbjct: 236 WLKRASSLPAPVSENPIETSKEHTFHTLNKLRTGSQSAVSVPTDKVAVIELLSPSVFRAL 295
Query: 172 VSLHPAGSVVPDAVAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTRPD 2
VSLHPAGS+ PDAVAFFSPDE GSYIHAR FS +HVFR +TEHAA ALQ FLG + +
Sbjct: 296 VSLHPAGSIDPDAVAFFSPDEGGSYIHARSFSVHHVFRQITEHAAMALQHFLGIKAE 352
>ref|XP_009626583.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Nicotiana tomentosiformis]
gi|697144918|ref|XP_009626584.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 27 [Nicotiana
tomentosiformis]
Length = 415
Score = 410 bits (1053), Expect = e-111
Identities = 216/338 (63%), Positives = 262/338 (77%), Gaps = 9/338 (2%)
Frame = -2
Query: 1000 QPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFVAAQ 821
QP T A ++ +++ +APPKQVA+A+ERL A+RLIAD+RLGADR+LEALFVAAQ
Sbjct: 7 QPHTSAGPGASGAESSQTSRDAPPKQVAMALERLGQASRLIADIRLGADRLLEALFVAAQ 66
Query: 820 PHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVCPDG 641
P ++KPLHLIL EEASMR+HLQDLR+VG+QLE+SGVL++SL+SRSNSWGLHMPLVCPDG
Sbjct: 67 PQHSSKPLHLILKEEASMRQHLQDLRSVGRQLEDSGVLDDSLRSRSNSWGLHMPLVCPDG 126
Query: 640 AVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXSKRQ 461
AVVAYAWKRQLAGQAGASAVDRTRLALKAF DQK+RFFPHL +K+
Sbjct: 127 AVVAYAWKRQLAGQAGASAVDRTRLALKAFNDQKRRFFPHL------LTNAGEEGATKKL 180
Query: 460 CGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTSSSNE 281
CGP SS +EE EL +T+S+VLT L K+ PNV F+Y+RLDWLKR++SL SS++E
Sbjct: 181 CGPPSS---DQEETCEL---ETVSEVLTHLKKEVPNVTTFSYQRLDWLKRSTSLPSSTSE 234
Query: 280 NPVDKQDRQNT---------GSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVPDAVA 128
N ++ + NT GS D V D+ A+IEL +PSVFRA+VS+ PAGS+ PDAVA
Sbjct: 235 NSIE-LSKDNTFQSTTTLRQGSSDDVVPDKVAIIELLIPSVFRAIVSVSPAGSLDPDAVA 293
Query: 127 FFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
FFSPDE GSY+HARGFS +HVFRH+TEHAA ALQ F G
Sbjct: 294 FFSPDEGGSYVHARGFSVHHVFRHITEHAAMALQHFTG 331
>ref|XP_009776105.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Nicotiana sylvestris]
Length = 415
Score = 407 bits (1046), Expect = e-111
Identities = 212/338 (62%), Positives = 258/338 (76%), Gaps = 9/338 (2%)
Frame = -2
Query: 1000 QPSTIANQQQETMDTVESTAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFVAAQ 821
QP T A ++ ++ +APPKQVA+A+ERL A+RLIAD+RLGADR+LEALFVAAQ
Sbjct: 7 QPHTAAGPGASGAESSQANGDAPPKQVAMALERLGQASRLIADIRLGADRLLEALFVAAQ 66
Query: 820 PHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVCPDG 641
P ++KPLHLIL EEASMR+HLQDLR+VG+QLE+SGVLN+SL+SRSNSWGLHMPLVCPDG
Sbjct: 67 PQHSSKPLHLILKEEASMRQHLQDLRSVGRQLEDSGVLNDSLRSRSNSWGLHMPLVCPDG 126
Query: 640 AVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXSKRQ 461
AVVAYAWKRQLAGQAGASAVDRTRLALKAF DQK+RFFPHL +K+
Sbjct: 127 AVVAYAWKRQLAGQAGASAVDRTRLALKAFNDQKRRFFPHL------DTNAGEEGATKKL 180
Query: 460 CGPHSSVLGHKEELSELSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTSSSNE 281
CGP SS + E + KT+S+VLT L + PNV F+Y+RLDWLKR++SL SS++E
Sbjct: 181 CGPPSS------DQEETCEPKTVSEVLTHLKMEVPNVTTFSYQRLDWLKRSTSLPSSTSE 234
Query: 280 NPVDKQDRQNT---------GSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVPDAVA 128
N ++ + NT GS D V D+ A+IEL +PSVFRA+VS+ PAGS+ PDA+A
Sbjct: 235 NSIE-LSKDNTFQSTTTLRQGSSDDVVPDKVAIIELLIPSVFRAIVSVSPAGSLDPDALA 293
Query: 127 FFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLG 14
FFSPDE GSY+HARGFS +HVFR++TEHAA ALQ F G
Sbjct: 294 FFSPDEGGSYVHARGFSVHHVFRYITEHAAMALQHFTG 331
>ref|XP_008442914.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Cucumis melo]
Length = 421
Score = 407 bits (1046), Expect = e-111
Identities = 213/322 (66%), Positives = 249/322 (77%), Gaps = 7/322 (2%)
Frame = -2
Query: 949 STAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFVAAQPHQTNKPLHLILNEEAS 770
S +APPKQVALAM+RL AARLIAD+RLGADR+LEAL V AQPHQ++KPLHL E+AS
Sbjct: 24 SADDAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSSKPLHLFQKEDAS 83
Query: 769 MRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 590
MR+HL DLR VGKQLEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA
Sbjct: 84 MRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 143
Query: 589 SAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXSKRQCGPHSSVLGHKEELSEL 410
SAVDRTRLALKAFTDQK+RFFPHL K+ C H V K+ +EL
Sbjct: 144 SAVDRTRLALKAFTDQKRRFFPHL----EDENASNNEPALKKPCFSH-GVTDVKQ--NEL 196
Query: 409 SDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTSSSNENPVD-------KQDRQN 251
D ++LSD+L+ ++K+ P +++FTY RLDWLK+AS+L S +NEN + R +
Sbjct: 197 IDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQANENSIGALKEHSYHSPRMS 256
Query: 250 TGSLGDAVADQAAVIELFLPSVFRAVVSLHPAGSVVPDAVAFFSPDEEGSYIHARGFSGY 71
G+LG AD+A VIEL +PSVFRAVVSLHP GSV PDA+AFFSPDE GS++HARGFS Y
Sbjct: 257 PGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALAFFSPDERGSHVHARGFSNY 316
Query: 70 HVFRHLTEHAARALQGFLGTRP 5
HVFRH+TEHAA LQ FLG +P
Sbjct: 317 HVFRHVTEHAATVLQYFLGNQP 338
>ref|XP_012468126.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X4 [Gossypium raimondii]
Length = 382
Score = 406 bits (1044), Expect = e-110
Identities = 223/342 (65%), Positives = 255/342 (74%), Gaps = 10/342 (2%)
Frame = -2
Query: 1003 QQPSTIANQQQETMDTVES--TAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
Q T A T T S T EAPPKQVALAM+RL AARLIAD+RLGADR+LEALFV
Sbjct: 15 QSAITAAPPPSATTSTPPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFV 74
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
A+QPHQ++KPLHL E+ SMR+HLQDLR VGKQLEESGVLNESL+SRSNSWGLHMPLVC
Sbjct: 75 ASQPHQSSKPLHLFRQEDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVC 134
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 135 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASK-- 192
Query: 469 KRQCGPHSSVLGHKEELSE-LSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTS 293
H ++ E+ + LSD KTLSDVLT L+K+ PN++V TY RLDWLKRASSL +
Sbjct: 193 -----KHRNLPALAEDNQDNLSDCKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPA 247
Query: 292 SSNENPVD--KQDRQNTGSLGDAV-----ADQAAVIELFLPSVFRAVVSLHPAGSVVPDA 134
S+N+N ++ K + +T L A+ D+ AVIELF PS+FRAVVSLHPAGS PD+
Sbjct: 248 SANDNTMEAPKHNFHSTSILRPALQNVASMDKVAVIELFFPSIFRAVVSLHPAGSTDPDS 307
Query: 133 VAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTR 8
VAFFSPDE GSY+H+RG S YHVFR +TEHA ALQ FLG R
Sbjct: 308 VAFFSPDEGGSYMHSRGSSVYHVFRQITEHATVALQYFLGIR 349
>ref|XP_012468122.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X1 [Gossypium raimondii]
gi|763749117|gb|KJB16556.1| hypothetical protein
B456_002G235400 [Gossypium raimondii]
Length = 433
Score = 406 bits (1044), Expect = e-110
Identities = 223/342 (65%), Positives = 255/342 (74%), Gaps = 10/342 (2%)
Frame = -2
Query: 1003 QQPSTIANQQQETMDTVES--TAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
Q T A T T S T EAPPKQVALAM+RL AARLIAD+RLGADR+LEALFV
Sbjct: 15 QSAITAAPPPSATTSTPPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFV 74
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
A+QPHQ++KPLHL E+ SMR+HLQDLR VGKQLEESGVLNESL+SRSNSWGLHMPLVC
Sbjct: 75 ASQPHQSSKPLHLFRQEDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVC 134
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 135 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASK-- 192
Query: 469 KRQCGPHSSVLGHKEELSE-LSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTS 293
H ++ E+ + LSD KTLSDVLT L+K+ PN++V TY RLDWLKRASSL +
Sbjct: 193 -----KHRNLPALAEDNQDNLSDCKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPA 247
Query: 292 SSNENPVD--KQDRQNTGSLGDAV-----ADQAAVIELFLPSVFRAVVSLHPAGSVVPDA 134
S+N+N ++ K + +T L A+ D+ AVIELF PS+FRAVVSLHPAGS PD+
Sbjct: 248 SANDNTMEAPKHNFHSTSILRPALQNVASMDKVAVIELFFPSIFRAVVSLHPAGSTDPDS 307
Query: 133 VAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTR 8
VAFFSPDE GSY+H+RG S YHVFR +TEHA ALQ FLG R
Sbjct: 308 VAFFSPDEGGSYMHSRGSSVYHVFRQITEHATVALQYFLGIR 349
>ref|XP_012468123.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X2 [Gossypium raimondii]
gi|763749116|gb|KJB16555.1| hypothetical protein
B456_002G235400 [Gossypium raimondii]
Length = 423
Score = 406 bits (1044), Expect = e-110
Identities = 223/342 (65%), Positives = 255/342 (74%), Gaps = 10/342 (2%)
Frame = -2
Query: 1003 QQPSTIANQQQETMDTVES--TAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
Q T A T T S T EAPPKQVALAM+RL AARLIAD+RLGADR+LEALFV
Sbjct: 15 QSAITAAPPPSATTSTPPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFV 74
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
A+QPHQ++KPLHL E+ SMR+HLQDLR VGKQLEESGVLNESL+SRSNSWGLHMPLVC
Sbjct: 75 ASQPHQSSKPLHLFRQEDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVC 134
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 135 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASK-- 192
Query: 469 KRQCGPHSSVLGHKEELSE-LSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTS 293
H ++ E+ + LSD KTLSDVLT L+K+ PN++V TY RLDWLKRASSL +
Sbjct: 193 -----KHRNLPALAEDNQDNLSDCKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPA 247
Query: 292 SSNENPVD--KQDRQNTGSLGDAV-----ADQAAVIELFLPSVFRAVVSLHPAGSVVPDA 134
S+N+N ++ K + +T L A+ D+ AVIELF PS+FRAVVSLHPAGS PD+
Sbjct: 248 SANDNTMEAPKHNFHSTSILRPALQNVASMDKVAVIELFFPSIFRAVVSLHPAGSTDPDS 307
Query: 133 VAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTR 8
VAFFSPDE GSY+H+RG S YHVFR +TEHA ALQ FLG R
Sbjct: 308 VAFFSPDEGGSYMHSRGSSVYHVFRQITEHATVALQYFLGIR 349
>ref|XP_012468124.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform X3 [Gossypium raimondii]
gi|763749115|gb|KJB16554.1| hypothetical protein
B456_002G235400 [Gossypium raimondii]
Length = 405
Score = 406 bits (1044), Expect = e-110
Identities = 223/342 (65%), Positives = 255/342 (74%), Gaps = 10/342 (2%)
Frame = -2
Query: 1003 QQPSTIANQQQETMDTVES--TAEAPPKQVALAMERLSSAARLIADVRLGADRILEALFV 830
Q T A T T S T EAPPKQVALAM+RL AARLIAD+RLGADR+LEALFV
Sbjct: 15 QSAITAAPPPSATTSTPPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFV 74
Query: 829 AAQPHQTNKPLHLILNEEASMRKHLQDLRNVGKQLEESGVLNESLKSRSNSWGLHMPLVC 650
A+QPHQ++KPLHL E+ SMR+HLQDLR VGKQLEESGVLNESL+SRSNSWGLHMPLVC
Sbjct: 75 ASQPHQSSKPLHLFRQEDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVC 134
Query: 649 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLXXXXXXXXXXXXXXXS 470
PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQK+RFFPHL
Sbjct: 135 PDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASK-- 192
Query: 469 KRQCGPHSSVLGHKEELSE-LSDDKTLSDVLTRLDKQAPNVRVFTYRRLDWLKRASSLTS 293
H ++ E+ + LSD KTLSDVLT L+K+ PN++V TY RLDWLKRASSL +
Sbjct: 193 -----KHRNLPALAEDNQDNLSDCKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPA 247
Query: 292 SSNENPVD--KQDRQNTGSLGDAV-----ADQAAVIELFLPSVFRAVVSLHPAGSVVPDA 134
S+N+N ++ K + +T L A+ D+ AVIELF PS+FRAVVSLHPAGS PD+
Sbjct: 248 SANDNTMEAPKHNFHSTSILRPALQNVASMDKVAVIELFFPSIFRAVVSLHPAGSTDPDS 307
Query: 133 VAFFSPDEEGSYIHARGFSGYHVFRHLTEHAARALQGFLGTR 8
VAFFSPDE GSY+H+RG S YHVFR +TEHA ALQ FLG R
Sbjct: 308 VAFFSPDEGGSYMHSRGSSVYHVFRQITEHATVALQYFLGIR 349