BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00023942
         (2721 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          576   e-161
gb|AFB73911.1| polyprotein [Citrus sinensis]                          570   e-159
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...   569   e-159
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              561   e-156
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     559   e-156
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             558   e-155
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   558   e-155
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  558   e-155
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              558   e-155
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              556   e-155
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   556   e-155
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              556   e-155
gb|AAD12998.1| pol polyprotein [Zea mays]                             555   e-154
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]   553   e-154
gb|ABF94883.1| transposon protein, putative, unclassified [Oryza...   552   e-154
gb|ABF96044.1| transposon protein, putative, unclassified [Oryza...   551   e-154
emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group]           550   e-153
emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]        550   e-153
gb|AAD12997.1| gag-pol polyprotein [Zea mays]                         550   e-153
gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]     549   e-153

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  576 bits (1485), Expect = e-161
 Identities = 312/671 (46%), Positives = 434/671 (64%), Gaps = 5/671 (0%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G+  +   L  +G   YV   +    KL P++RK + + Y D  KGY ++   P+   
Sbjct: 638  WTGKPADYSYLHAFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWD--PTAHK 695

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGSDI 2360
              I SRD++F+E+   R     K+ +   ++E  + +P   E     + P  ++ S +  
Sbjct: 696  IVI-SRDVIFVEDQLQR-----KDGDDGTVKEKSETVPVYVE-----NNPENSDSSEAAP 744

Query: 2359 HPSGSEPLETQVFEPRRSERGKVPRR-HFEIEGGI-LMYAASIED-EPTSFREAISS-DC 2192
                 EP+E++  E RRS R + P   H E    I + Y    ED EP++F EA++S D 
Sbjct: 745  EHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSLDV 804

Query: 2191 NKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGY 2012
              W+ AMQEEI+++ KN   ELV LPHGRKAIGNKWV+KIKR  +  +++Y++RLV KGY
Sbjct: 805  ALWMTAMQEEIEALHKNKTWELVPLPHGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGY 864

Query: 2011 TQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMG 1832
             Q+EGID+ E FSPVVR  ++R+VLA+ A  DL L Q+DVKTAFL+G L+EEIYM QP G
Sbjct: 865  AQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEG 924

Query: 1831 SEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQES-IL 1655
                G+E  VCRL +S+YGLKQ+ R WY RF   I S GY  +  DHC Y KR +++  +
Sbjct: 925  FAETGKENLVCRLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFI 984

Query: 1654 ILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQE 1475
            IL LYVDD+L+AG + + I   K  L+  FEM D+G AN +LG+QI RDR+ + + LSQ+
Sbjct: 985  ILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQK 1044

Query: 1474 TYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAML 1295
             Y+K IL RF M DCK I TP+  +  LS+  CP NE E+K MS VPYASAVGSLM+AM+
Sbjct: 1045 NYLKKILRRFNMQDCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMI 1104

Query: 1294 CTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFSDADW 1115
            CTRPDI+ AVG VSRY +NPG  HW AVKRI RY++GT+N+ LCY G +  ++G+ D+D+
Sbjct: 1105 CTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIRGTSNVALCYGGSEFTVRGYVDSDF 1164

Query: 1114 SNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKR 935
            + D D+ KST+GYVF L G A++W S+ Q  +ALST EAEY+A   A +EA+W++  L+ 
Sbjct: 1165 AGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEE 1224

Query: 934  LGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTN 755
            LG   H ++ + ++ DS SAL   ++P +H +TKHIG ++HF+R++V    V L+ I T 
Sbjct: 1225 LG---HKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTK 1281

Query: 754  RMLVDPLTKPI 722
              L D LTK I
Sbjct: 1282 ENLADVLTKSI 1292


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  570 bits (1468), Expect = e-159
 Identities = 309/671 (46%), Positives = 433/671 (64%), Gaps = 5/671 (0%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G+  +   L  +G   YV   +    KL  ++R+ + + Y D  KGY ++   P+   
Sbjct: 638  WTGKPADYSYLHAFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWD--PTAHK 695

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGSDI 2360
              I SRD++F+E+   R     K+ +   ++E  + +P   E     + P  ++ S +  
Sbjct: 696  IVI-SRDVIFVEDQLQR-----KDGDDGTVKEKSETVPVYVE-----NNPENSDSSEAAP 744

Query: 2359 HPSGSEPLETQVFEPRRSERGKVPRR-HFEIEGGI-LMYAASIED-EPTSFREAI-SSDC 2192
                 EP+E++  E RRS R + P   H E    I + Y    ED EP++F EA+ SSD 
Sbjct: 745  EHEEQEPVESEAPEVRRSTRERRPPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSSDV 804

Query: 2191 NKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGY 2012
              W+ AMQEEI+++ KN   ELV LP GRKAIGNKWV+KIKR  +  +++Y++RLV KGY
Sbjct: 805  ALWMTAMQEEIEALHKNKTWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGY 864

Query: 2011 TQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMG 1832
             Q+EGID+ E FSPVVR  ++R+VLA+ A  DL L Q+DVKTAFL+G L+EEIYM QP G
Sbjct: 865  AQKEGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEG 924

Query: 1831 SEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQES-IL 1655
                G+E  VCRL +S+YGLKQ+ R WY RF   I S GY  +  DHC Y KR +++  +
Sbjct: 925  FAETGKENLVCRLNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFI 984

Query: 1654 ILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQE 1475
            IL LYVDD+L+AG + + I   K  L+  FEM D+G AN +LG+QI RDR+   + LSQ+
Sbjct: 985  ILLLYVDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQK 1044

Query: 1474 TYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAML 1295
             Y+K IL RF M DCK I T +  +  LS+  CP NE E+K MS VPYASAVGSLM+AM+
Sbjct: 1045 NYLKKILRRFNMQDCKSISTSLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMI 1104

Query: 1294 CTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFSDADW 1115
            CTRPDI+ AVG+VSRY +NPG  HW AVKRI RY++GT+++ LCY G +  ++G+ D+D+
Sbjct: 1105 CTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDF 1164

Query: 1114 SNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKR 935
            + D D+ KST+GYVF L G A++W S+ Q  +ALST EAEY+A   A ++A+W++  L+ 
Sbjct: 1165 AGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKKAIWIQRLLEE 1224

Query: 934  LGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTN 755
            LG   H ++ +L++ DS SAL   ++P +H +TKHIG ++HF+R++V    V L+ I T 
Sbjct: 1225 LG---HKQQKILVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTK 1281

Query: 754  RMLVDPLTKPI 722
              L D LTKPI
Sbjct: 1282 ENLADVLTKPI 1292


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score =  569 bits (1466), Expect = e-159
 Identities = 318/711 (44%), Positives = 441/711 (62%), Gaps = 31/711 (4%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            +KG KP+L ++R WG    V   +    KL PR      I Y + SKGY  Y  H    +
Sbjct: 612  FKGWKPSLKHMRVWGCPSEVRIYNPQEKKLDPRTISGYFIGYAERSKGYRFYCPHHITRI 671

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPII-------- 2384
              +ESR+  FIEND    SD  ++L   EI+  E    +S+E   ++  P +        
Sbjct: 672  --VESRNAKFIENDLISGSDQLRDLGS-EIDYIESQPSTSNERLVVIHTPQVQRDDEQHM 728

Query: 2383 -----------AEYSGSDIHPSGSEPLETQVFEPRRSERGKVPR----RHFEIEGGILMY 2249
                        +     IH +  +P+E    +P+ +    + R    R   I    ++Y
Sbjct: 729  IGIPQTVVDNLVDQVDHQIHENDEQPVEQH--DPQENVDATLRRSTRVRKSAIPSDYIVY 786

Query: 2248 AAS------IEDEPTSFREAIS-SDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGN 2090
                      E++P +F +A+S  + N W  AM++E+ SM  N V  LV+LP+G KAIG 
Sbjct: 787  LQESDYNIGAENDPETFDQAMSCKESNLWYDAMKDEMSSMQSNKVWNLVELPNGAKAIGC 846

Query: 2089 KWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLE 1910
            KWVFK K+ + G+I++YK+RLVAKG+TQ+EGIDY+ETFSPV +  S+R++LA+VA+ DLE
Sbjct: 847  KWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIILALVAHFDLE 906

Query: 1909 LFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQS 1730
            L QMDVKTAFLNG+L+EE+YM QP G      E  VC+L +SIYGLKQ+SRQWY++FH  
Sbjct: 907  LQQMDVKTAFLNGDLEEEVYMKQPEGFSSNSGEHLVCKLNKSIYGLKQASRQWYLKFHGI 966

Query: 1729 ITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDM 1550
            I+S G++    D C+Y K S   I  L LYVDDILLA ND   +   K++LS NF+M DM
Sbjct: 967  ISSFGFDENPMDQCIYHKVSGSKICFLVLYVDDILLAANDRGLLHEVKQFLSKNFDMKDM 1026

Query: 1549 GEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPK 1370
            G+A+YV+G++I RDRSR  L LSQETYI  ILERFRM DC P   P+ K    + + CPK
Sbjct: 1027 GDASYVIGIKIHRDRSRGILGLSQETYINKILERFRMKDCSPSVAPIVKGDRFNLNQCPK 1086

Query: 1369 NEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYL 1190
            N+ E++ M N+PYAS VGSLMYA +CTRPDI+FAVGM+ RYQSNPG +HW+A K++ RYL
Sbjct: 1087 NDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAAKKVLRYL 1146

Query: 1189 KGTANLPLCYHGED-IRLKGFSDADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIAL 1013
            +GT +  L Y   D +   G+SD+D++   D  +STSGY+F + GGAI+W S KQ   A 
Sbjct: 1147 QGTKDYMLMYRQTDNLDAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAAT 1206

Query: 1012 STMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTK 833
            STMEAE+V+   A    VWL+ F+  L + +     + ++ D+++A+   K+ K   ++K
Sbjct: 1207 STMEAEFVSCFEATSHGVWLKSFISGLKIIDTISRPLRIFCDNSAAVFMAKNNKSGSRSK 1266

Query: 832  HIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRIAFQSHVENMGL 680
            HI  ++  IR+ V  +KVV+ HIST  M+ DPLTK +P   F+ HVE MGL
Sbjct: 1267 HIDIKYLAIRERVKDKKVVIEHISTELMIADPLTKGMPPFKFKDHVERMGL 1317


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  561 bits (1445), Expect = e-156
 Identities = 297/668 (44%), Positives = 425/668 (63%), Gaps = 2/668 (0%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            WKG+  +  +L  +G   YV   S    KL P++RK + + Y D  KGY ++   P+   
Sbjct: 638  WKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD--PTARK 695

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGSDI 2360
              + SRD+VF EN+   +    KN   F+      I   S E     ++ +  E    D+
Sbjct: 696  VVV-SRDVVFAENE---LQSEQKNDSTFKETAILQIEEKSKESDSSEAESVHEEQEPDDV 751

Query: 2359 HPSGSEPLETQVFEPRRSERGKVPRRHFEIEGGILMYAASIEDEPTSFREAIS-SDCNKW 2183
            + +G      Q  +P            + + G       + E EP++F EA++ SD ++W
Sbjct: 752  N-NGVRRSTRQTQKPSWQS-------DYVMTGHDAYCLIAEEGEPSTFHEALNGSDASQW 803

Query: 2182 LFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQ 2003
            + A+ EE++++ KN   ELV+LP GRKAIGNKWV+KIKR  +  +++Y++RLV KGY Q+
Sbjct: 804  MTAIHEEMEALRKNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQK 863

Query: 2002 EGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEV 1823
            EGID+ E FSPVVR  +IR+VLA+ A LDL L Q+DVKTAFL+G L+EEIYM QP G + 
Sbjct: 864  EGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKE 923

Query: 1822 KGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQ-ESILILA 1646
            +G+E  VCRL +S+YGLKQ+ R WY RF   I S  Y  +  DHC Y KR      +IL 
Sbjct: 924  QGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILL 983

Query: 1645 LYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYI 1466
            LYVDDIL+ G + + +   K  L+  F+M D+G AN +LG+QI RDR  + + LSQ+ Y+
Sbjct: 984  LYVDDILVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYL 1043

Query: 1465 KNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTR 1286
            + +L RF M DCKPI TP+  +  LS+   P NE E+  MS VPYASAVGSLMYAM+CTR
Sbjct: 1044 RKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTR 1103

Query: 1285 PDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFSDADWSND 1106
            PDI+ AVG+VSR+ ++PG  HW AVKRI RY+KGT+ + +C+ G ++ ++G+ D+D++ D
Sbjct: 1104 PDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYVDSDFAGD 1163

Query: 1105 KDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGV 926
             D+ KST+GYVF L GGA++W S+ Q  +ALST EAEY+A   A +EA+W++  ++ LG 
Sbjct: 1164 HDKRKSTTGYVFTLTGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQRLMEELG- 1222

Query: 925  SEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRML 746
              H +E + +Y DS SAL   ++P +H +TKHIG ++HF+R++V    V ++ I TN  L
Sbjct: 1223 --HKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNL 1280

Query: 745  VDPLTKPI 722
             D +TKPI
Sbjct: 1281 ADVMTKPI 1288


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  559 bits (1440), Expect = e-156
 Identities = 302/685 (44%), Positives = 424/685 (61%), Gaps = 5/685 (0%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G+ P+L  L+ WG   YV        KL P++ K   + Y   +KGY  Y    +   
Sbjct: 652  WTGQPPSLSFLKIWGCEAYVKRLQS--DKLTPKSDKCFVVGYPKETKGYYFYNREQAKVF 709

Query: 2539 TEIESRDIVFIENDF--PRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGS 2366
                +R  VF+E +F   R+S I  +LE  E++E+ + + +++E ++             
Sbjct: 710  V---ARHGVFLEKEFLSRRVSGIRVHLE--EVQETPETVSATTEPQQ------------- 751

Query: 2365 DIHPSGSEPLETQVFEPRRSERGK-VPRRHFEIEGGILMYAASIEDEPTSFREA-ISSDC 2192
                    P       PRRSER +  P R+   E   ++   +  DEP ++ EA +  D 
Sbjct: 752  --EDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDN--DEPKTYEEAMVGHDS 807

Query: 2191 NKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGY 2012
            NKWL AM+ EI+SM  N V  LVD P G K I  KW+FK K   DG++  YK+RLVAKG+
Sbjct: 808  NKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGF 867

Query: 2011 TQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMG 1832
             Q +G+DY+ETFSPV    SIR++LAI AY D E++QMDVKTAFLNGNL E++YM QP G
Sbjct: 868  KQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQG 927

Query: 1831 SEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILI 1652
                    K+C+L++SIYGLKQ+SR W +RF + I   G+   EE+ CVY K S  +I+ 
Sbjct: 928  FVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVF 987

Query: 1651 LALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQET 1472
            L LYVDDILL GND+  + + K  L ++F M D+GEA Y+LG++I RDRS++ + LSQ T
Sbjct: 988  LILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQST 1047

Query: 1471 YIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLC 1292
            YI  +L+RF MHD K    PM     LS + CP+   E+  M  VPYASA+GS+MYAMLC
Sbjct: 1048 YIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLC 1107

Query: 1291 TRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHG-EDIRLKGFSDADW 1115
            TRPD+S+A+   SRYQS+PG  HW AVK I +YL+ T ++ L Y G ED+ + G++DA +
Sbjct: 1108 TRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASF 1167

Query: 1114 SNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKR 935
              DKD+++S SG+VF L GGA++W S KQ  +A ST EAEY+A + A +EAVW++ F+  
Sbjct: 1168 QTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSE 1227

Query: 934  LGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTN 755
            LGV       + LY D++ A+A  K+P+ H K+KHI RR+H IR++V R  V +  + T+
Sbjct: 1228 LGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTD 1287

Query: 754  RMLVDPLTKPIPRIAFQSHVENMGL 680
              + DPLTKP+P+   ++H   MG+
Sbjct: 1288 LNIADPLTKPLPQPKHEAHTRAMGI 1312


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  558 bits (1438), Expect = e-155
 Identities = 308/675 (45%), Positives = 425/675 (62%), Gaps = 9/675 (1%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G+  +  NL  +GS  Y    +    KL P++RK   + Y D  KGY ++   P+   
Sbjct: 628  WTGKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWD--PTAHK 685

Query: 2539 TEIESRDIVFIENDFPR----ISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYS 2372
              I SRD++F+E+   R     S   +  E  +I+  E+    SSE      +P      
Sbjct: 686  VVI-SRDVIFVEDRLQRGEVDDSTEKEKPETTQIQVEEEFEQDSSEAEPAHEEP------ 738

Query: 2371 GSDIHPSGSEPLETQVFEPRRSERGKV-PRRH--FEIEGGILMYAASIEDEPTSFREAI- 2204
                     EP  +     R+S+R K  P  H  + +EG +     + + EP++F+EAI 
Sbjct: 739  ---------EPESSGAPTTRQSDREKRRPTWHSDYVMEGNVAYCLLTEDGEPSTFQEAIN 789

Query: 2203 SSDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLV 2024
            SSD ++W  AMQEEI+++ KN+  +LV LP GRK IGNKWVFKIKR  D  +++Y++RLV
Sbjct: 790  SSDVSQWTAAMQEEIEALHKNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQVERYRARLV 849

Query: 2023 AKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMS 1844
             KGY Q+EGID+ E FSPVVR  ++R+VLA+ A  +L L Q+DVKTAFL+G+L+EEIYM 
Sbjct: 850  VKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDLEEEIYML 909

Query: 1843 QPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKR-SQ 1667
            QP G E K  +  VCRL +S+YGLKQ+ R WY RF   I   GY  +  D C Y KR  +
Sbjct: 910  QPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNADPCAYFKRFGK 969

Query: 1666 ESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLS 1487
            ++ +IL LYVDD+L+AG + + I   K  L+  FEM D+G AN +LG+QI RDR  + + 
Sbjct: 970  DNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIW 1029

Query: 1486 LSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLM 1307
            LSQ+ Y+K IL RF M DCK I TP+  +  +S+   P NE+ +  MS VPYASAVGSLM
Sbjct: 1030 LSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLM 1089

Query: 1306 YAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFS 1127
            +AM+CTRPDI+ AVG+VSRY +NPG  HW  VKRI RY+KGT+++ LCY G D  + G+ 
Sbjct: 1090 FAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIINGYV 1149

Query: 1126 DADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRI 947
            D+D++ D D+ KST+GYVFK+ GGA++W S+ Q  +A ST EAEYVA   A +EA+WL++
Sbjct: 1150 DSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKM 1209

Query: 946  FLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRH 767
             L+ LG   H +E V L+ DS SAL   ++P +H +TKHI  ++HFIR+ V    V L+ 
Sbjct: 1210 LLEELG---HKQEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEGTVDLQK 1266

Query: 766  ISTNRMLVDPLTKPI 722
            I T   + D LTK I
Sbjct: 1267 IHTADNVADFLTKII 1281


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  558 bits (1438), Expect = e-155
 Identities = 305/688 (44%), Positives = 419/688 (60%), Gaps = 5/688 (0%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G+ PNL  L+ WG   Y      +  KLGP++ K   + Y   +KGY  Y  HP+   
Sbjct: 296  WTGKVPNLSFLKIWGCESYAKRL--ITDKLGPKSDKCYFVGYPKETKGYYFY--HPTDNK 351

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGSDI 2360
              +  R+  F+E +F         + L E+ E +  +P+S E  +L  + ++        
Sbjct: 352  VFVV-RNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQEEHQLDLRRVV-------- 402

Query: 2359 HPSGSEPLETQVFEPRRSERGKVPRRHFE---IEGGILMYAASIEDEPTSFREAISS-DC 2192
                 EP+  +  E RRSER +     F    ++   L    S  DEPTS+ EA+   D 
Sbjct: 403  -----EPILVEP-EVRRSERSRHEPDRFRDWVMDDHALFMIES--DEPTSYEEALMGPDS 454

Query: 2191 NKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGY 2012
            +KWL A + E++SM +N V  LVDLP G K I  KW+FK K   DG+I  YK+ LVAKGY
Sbjct: 455  DKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGY 514

Query: 2011 TQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMG 1832
             Q  GIDY+ET+SPV    SIR++LA  A+ D E++QMDVKTAFLNGNL+E +YM+QP G
Sbjct: 515  KQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEG 574

Query: 1831 SEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILI 1652
              V    RKVC+L RSIYGLKQ+SR W +RF+++I    +   EE+ CVY K S  ++  
Sbjct: 575  FTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAF 634

Query: 1651 LALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQET 1472
            L LYVDDILL GND+  + + K WL S F M DMGEA Y+LG++I RDR  K + LSQ+T
Sbjct: 635  LVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDT 694

Query: 1471 YIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLC 1292
            YI  +L RF MHD K    PM     LS   CP    E++ MS +PYASA+GS+MYAML 
Sbjct: 695  YIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLY 754

Query: 1291 TRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHG-EDIRLKGFSDADW 1115
            TRPD++ A+ M SRYQS+PG +HW  V+ IF+YL+ T +  L Y G E++ + G++DA +
Sbjct: 755  TRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASF 814

Query: 1114 SNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKR 935
              DKD+F+S SG+ F L GGA++W S KQ  +A ST EAEY+A + A +E VW+R F+  
Sbjct: 815  QTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITE 874

Query: 934  LGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTN 755
            LGV       + LY D+  A+A  K+PK H K+KHI RR+H IR+++ R  V +  +ST+
Sbjct: 875  LGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTD 934

Query: 754  RMLVDPLTKPIPRIAFQSHVENMGLNRI 671
              + D  TKP+P+   +SH   +G+  I
Sbjct: 935  ANVADHFTKPLPQPKHESHTTAIGIRFI 962


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  558 bits (1437), Expect = e-155
 Identities = 302/674 (44%), Positives = 422/674 (62%), Gaps = 8/674 (1%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            WKG+  +  +LR +G   YV   S    KL P++R+   + Y D  KGY ++   P+   
Sbjct: 638  WKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWD--PTARK 695

Query: 2539 TEIESRDIVFIENDFPRISD---INKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSG 2369
              + SRD++F+EN+  +        K     EIEE                     E S 
Sbjct: 696  IFV-SRDVIFVENELQKEQKNDGTTKETATVEIEEKSG-----------------EENSE 737

Query: 2368 SDIHPSGSEPLETQVFEPRRSERG-KVPRRHFE-IEGGILMYAASIED-EPTSFREAIS- 2201
            ++      EP E    EPRR+ R  + P  H E +      Y    ED EP++F EA++ 
Sbjct: 738  AEPEHEEQEPNEVNDAEPRRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNG 797

Query: 2200 SDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVA 2021
            SD + W+ AMQEEI+++ +N+  ELV+LP GRKAIGNKWVFKIKR  +  +++Y++RLV 
Sbjct: 798  SDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVV 857

Query: 2020 KGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQ 1841
            KGY Q+EGID+ E FSPVVR  +IR+VLA+ A  +L L Q+DVKTAFL+G L+EEIYM Q
Sbjct: 858  KGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGELEEEIYMLQ 917

Query: 1840 PMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQES 1661
            P G E K +E  VCRL +S+YGLKQ+ R WY RF   I S GY  +  DHC Y KR  + 
Sbjct: 918  PEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSSDHCTYYKRFDDG 977

Query: 1660 -ILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSL 1484
              +IL LYVDD+L+ G + + +   K  L+  F+M D+G AN +LG+QI RDR  + + L
Sbjct: 978  DFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWL 1037

Query: 1483 SQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMY 1304
            SQ+ Y++ +L RF M D  PI TP+  +  LS+   P +E E+  MS VPYASAVGSLMY
Sbjct: 1038 SQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMY 1097

Query: 1303 AMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFSD 1124
            AM+CTRPDI+ AVG VSR+ ++PG  HW AVKRI RY++GT+   LC+ G +  ++G+ D
Sbjct: 1098 AMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEFTIRGYVD 1157

Query: 1123 ADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIF 944
            +D++ D D+ KST+GYVF L GGA++W S+ Q  +ALST EAEY+A   A +EA+W +  
Sbjct: 1158 SDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWTQRL 1217

Query: 943  LKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHI 764
            L+ LG   H ++ + +Y DS SAL   ++P +H +TKHIG ++HF+R++V    V ++ I
Sbjct: 1218 LEELG---HKQQKITVYCDSPSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVNMQKI 1274

Query: 763  STNRMLVDPLTKPI 722
             T   L D +TKPI
Sbjct: 1275 HTKDNLADVMTKPI 1288


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  558 bits (1437), Expect = e-155
 Identities = 296/675 (43%), Positives = 431/675 (63%), Gaps = 9/675 (1%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            WKG+  +  +L  +G   YV   S    KL P++RK + + Y D  KGY ++   P+   
Sbjct: 638  WKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD--PTARK 695

Query: 2539 TEIESRDIVFIENDFP---RISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSG 2369
              + SRD+VF EN+     +    +K   + ++EE       S E     ++P+  E   
Sbjct: 696  VVV-SRDVVFAENELQSKQKNDSTSKETAIVQMEEK------SKESDSSEAEPVHEEQEP 748

Query: 2368 SDIHPSGSEPLETQVFEPRRSERGKVPRRHFEIEGGILMYAA----SIEDEPTSFREAIS 2201
             D++              RRS R +  +  ++ +  +  + A    + E EP++F EA++
Sbjct: 749  DDVNNG-----------VRRSTR-QTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALN 796

Query: 2200 -SDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLV 2024
             SD ++W+ AM EE++++ +N   ELV+LP GRKAIGNKWV+KIKR  +  +++Y++RLV
Sbjct: 797  GSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLV 856

Query: 2023 AKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMS 1844
             KGY Q+EGID+ E FSPVVR  +IR+VLA+ A LDL L Q+DVKTAFL+G L+EEIYM 
Sbjct: 857  VKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYML 916

Query: 1843 QPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQ- 1667
            QP G + +G+E  VCRL +S+YGLKQ+ R WY RF   I S  Y  +  DHC Y KR   
Sbjct: 917  QPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDG 976

Query: 1666 ESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLS 1487
               +IL LYVDD+L+ G + + +   K  L+  F+M D+G AN +LG+QI RDR  + + 
Sbjct: 977  NDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIW 1036

Query: 1486 LSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLM 1307
            LSQ+ Y++ +L RF M DCKPI TP+  +  LS+   P NE E+  MS VPYASAVGSLM
Sbjct: 1037 LSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLM 1096

Query: 1306 YAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFS 1127
            YAM+CTRPDI+ AVG+VSR+ ++PG  HW AVKRI RY+KGT+ + +C+ G ++ ++G+ 
Sbjct: 1097 YAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYV 1156

Query: 1126 DADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRI 947
            D+D++ D D+ KST+GYVF L GGA++W S+ Q  +ALST EAEY+A   A +EA+W++ 
Sbjct: 1157 DSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQR 1216

Query: 946  FLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRH 767
             ++ LG   H +E + +Y DS SAL   ++P +H +TKHIG ++HF+R++V    V ++ 
Sbjct: 1217 LMEELG---HKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273

Query: 766  ISTNRMLVDPLTKPI 722
            I TN  L D +TK I
Sbjct: 1274 IHTNDNLADAMTKSI 1288


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  556 bits (1434), Expect = e-155
 Identities = 296/675 (43%), Positives = 430/675 (63%), Gaps = 9/675 (1%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            WKG+  +  +L  +G   YV   S    KL P++RK + + Y D  KGY ++   P+   
Sbjct: 638  WKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWD--PTARK 695

Query: 2539 TEIESRDIVFIENDFP---RISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSG 2369
              + SRD+VF EN+     +    +K   + ++EE       S E     ++ +  E   
Sbjct: 696  VVV-SRDVVFAENELQSEQKNDSTSKETAIVQMEEK------SKESDSSEAESVHEEQEP 748

Query: 2368 SDIHPSGSEPLETQVFEPRRSERGKVPRRHFEIEGGILMYAA----SIEDEPTSFREAIS 2201
             D++              RRS R +  +  ++ +  +  + A    + E EP++F EA++
Sbjct: 749  DDVNDG-----------VRRSTR-QTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALN 796

Query: 2200 -SDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLV 2024
             SD ++W+ AM EE++++ +N   ELV+LP GRKAIGNKWV+KIKR  +  +++Y++RLV
Sbjct: 797  GSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLV 856

Query: 2023 AKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMS 1844
             KGY Q+EGID+ E FSPVVR  +IR+VLA+ A LDL L Q+DVKTAFL+G L+EEIYM 
Sbjct: 857  VKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYML 916

Query: 1843 QPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQ- 1667
            QP G + +G+E  VCRL +S+YGLKQ+ R WY RF   I S  Y  +  DHC Y KR   
Sbjct: 917  QPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYKRFDG 976

Query: 1666 ESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLS 1487
               +IL LYVDD+L+ G + + +   K  L+  F+M D+G AN +LG+QI RDR    + 
Sbjct: 977  NDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDMKIW 1036

Query: 1486 LSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLM 1307
            LSQ+ Y++ +L RF M DCKPI TP+  +  LS+   P NE E+  MS VPYASAVGSLM
Sbjct: 1037 LSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLM 1096

Query: 1306 YAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFS 1127
            YAM+CTRPDI+ AVG+VSR+ ++PG  HW AVKRI RY+KGT+ + +C+ G ++ ++G+ 
Sbjct: 1097 YAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVRGYV 1156

Query: 1126 DADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRI 947
            D+D++ D D+ KST+GYVF L GGA++W S+ Q  +ALST EAEY+A   A +EA+W++ 
Sbjct: 1157 DSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQR 1216

Query: 946  FLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRH 767
             ++ LG   H +E + +Y DS SAL   ++P +H +TKHIG ++HF+R++V    V ++ 
Sbjct: 1217 LMEELG---HKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273

Query: 766  ISTNRMLVDPLTKPI 722
            I TN  L D +TKPI
Sbjct: 1274 IHTNDNLADVMTKPI 1288


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  556 bits (1434), Expect = e-155
 Identities = 289/589 (49%), Positives = 395/589 (67%), Gaps = 12/589 (2%)
 Frame = -3

Query: 2401 VSQPIIAEYSGSDIHPSGSEPLETQVFE----------PRRSERG-KVPRRHFEIEGGIL 2255
            +S+ ++ E    +I P+ +  +E Q  E          PRRS R  ++P R+ E     +
Sbjct: 76   ISKVVLEELLADEISPTPTTVVERQRKETTAQDLTPPPPRRSGREIRLPIRYRENGEAQV 135

Query: 2254 MYAASIEDEPTSFREAISS-DCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVF 2078
                  +D+P +F+ A+   D  KW  AM+ EI+SM  N V +LVDLP G K IG KW++
Sbjct: 136  AVTDGSDDDPLTFKMAMDDVDREKWQEAMKLEIESMYSNSVWKLVDLPEGIKPIGCKWIY 195

Query: 2077 KIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQM 1898
            K KR  +G ++ +K+RLVAKG+TQ+EG+DYE+TFSPV    SIR++L+I AY D E++QM
Sbjct: 196  KXKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVXMLKSIRILLSIXAYYDYEIWQM 255

Query: 1897 DVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSA 1718
            DVKT FLNG+L+E IYM QP G  VK QE+KVC+L+RSIYGLKQ+SR W + F+++I S 
Sbjct: 256  DVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSY 315

Query: 1717 GYEMIEEDHCVYIKRSQESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEAN 1538
            G+E    + CVY +   + ++ L LYVDDILL GND+E +   K WL+S F+M D+GEA+
Sbjct: 316  GFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLSKVKNWLASQFQMKDLGEAS 375

Query: 1537 YVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQE 1358
            Y+LG+Q+ RDR  + L+LSQ  YI  +L +F M + K  + P      LS + CPK  Q+
Sbjct: 376  YILGIQMTRDRKNRLLALSQAAYIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQD 435

Query: 1357 KKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTA 1178
            ++ M  VPYASAVGSLMYAMLCTRPDI FAVG+VSRYQSNPG +HW AVK I +YL+ T 
Sbjct: 436  EEKMRRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTR 495

Query: 1177 NLPLCYHGEDIRLKGFSDADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEA 998
            N  L Y G ++   G++D+D+ +D+D  KSTS  VF LGGGAI W S KQ C+A STMEA
Sbjct: 496  NYMLVYSGRELIPIGYTDSDFQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEA 555

Query: 997  EYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRR 818
            EYVA   A +EAVWLR FLK L V  +  E + LY D++ A+A  K+P+ H K KHI R+
Sbjct: 556  EYVAACEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERK 615

Query: 817  FHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRIAFQSHVENMGLNRI 671
            FH +R++V+R  V +  I++   + DP TK +P  +F+ H+E MGL  +
Sbjct: 616  FHLVREIVSRGDVSVEKIASANNIADPFTKTLPARSFEQHLEGMGLREM 664


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  556 bits (1432), Expect = e-155
 Identities = 296/675 (43%), Positives = 430/675 (63%), Gaps = 9/675 (1%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            WKG+  +  +L  +G   YV   S    KL P++RK + + Y D  KGY ++   P+   
Sbjct: 638  WKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWD--PTARK 695

Query: 2539 TEIESRDIVFIENDFP---RISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSG 2369
              + SRD+VF EN+     +    +K   + ++EE       S E     ++ +  E   
Sbjct: 696  VVV-SRDVVFAENELQSEQKNDSTSKETAIVQMEEK------SKESDSSEAESVHEEQEP 748

Query: 2368 SDIHPSGSEPLETQVFEPRRSERGKVPRRHFEIEGGILMYAA----SIEDEPTSFREAIS 2201
             D++              RRS R +  +  ++ +  +  + A    + E EP++F EA++
Sbjct: 749  DDVNDG-----------VRRSTR-QTQKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALN 796

Query: 2200 -SDCNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLV 2024
             SD ++W+ AM EE++++ +N   ELV+LP GRKAIGNKWV+KIKR  +  +++Y++RLV
Sbjct: 797  GSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLV 856

Query: 2023 AKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMS 1844
             KGY Q+EGID+ E FSPVVR  +IR+VLA+ A LDL L Q+DVKTAFL+G L+EEIYM 
Sbjct: 857  VKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYML 916

Query: 1843 QPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQ- 1667
            QP G + +G+E  VCRL +S+YGLKQ+ R WY RF   I S  Y  +  DHC Y KR   
Sbjct: 917  QPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDG 976

Query: 1666 ESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLS 1487
               +IL LYVDD+L+ G + + +   K  L+  F+M D+G AN +LG+QI RDR  + + 
Sbjct: 977  NDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIW 1036

Query: 1486 LSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLM 1307
            LSQ+ Y++ +L RF M DCKPI TP+  +  LS+   P NE E+  MS VPYASAVGSLM
Sbjct: 1037 LSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLM 1096

Query: 1306 YAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCYHGEDIRLKGFS 1127
            YAM+CTRPDI+ AVG+VSR+ ++PG  HW AVKRI RY+KGT+ + +C+ G ++ + G+ 
Sbjct: 1097 YAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTVWGYV 1156

Query: 1126 DADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRI 947
            D+D++ D D+ KST+GYVF L GGA++W S+ Q  +ALST EAEY+A   A +EA+W++ 
Sbjct: 1157 DSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAIWMQR 1216

Query: 946  FLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRH 767
             ++ LG   H +E + +Y DS SAL   ++P +H +TKHIG ++HF+R++V    V ++ 
Sbjct: 1217 LMEELG---HKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQK 1273

Query: 766  ISTNRMLVDPLTKPI 722
            I TN  L D +TKPI
Sbjct: 1274 IHTNDNLADVMTKPI 1288


>gb|AAD12998.1| pol polyprotein [Zea mays]
          Length = 998

 Score =  555 bits (1429), Expect = e-154
 Identities = 310/737 (42%), Positives = 432/737 (58%), Gaps = 57/737 (7%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G KP L     WG        +   GKL  R      I Y D SKGY  Y   P    
Sbjct: 260  WTGRKPTLNYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRSKGYRFY--CPDRQT 317

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFE---------IEESEDILP------------- 2426
              IE+R  +F+E+D  + S + + ++L E         +EE    +P             
Sbjct: 318  KFIETRHAIFLEDDMIKGSKVLREVDLQEKRIYVPFPMVEEPHFSIPTVVTPTVTPTVGE 377

Query: 2425 --------SSSEGRELVSQPI-------IAEYSGSD---IHPSGSEPLETQV-FEPRRSE 2303
                    SS+   E V+ P        +A+ S  D   + PS +   E QV  EP  S 
Sbjct: 378  TPAANVASSSATTTEQVASPSAHIGPEPVAQDSSEDDDSVAPSDAPLQEPQVESEPEPSL 437

Query: 2302 RGKVPRRHFEIEGGILMYAA--------------SIEDEPTSFREAI-SSDCNKWLFAMQ 2168
            R     R   I     +YAA                E +PT++  A+ S++ +KWL AM+
Sbjct: 438  RRSQRLRKSAIPDDYEVYAAENIECDEIHMSEDIDTEGDPTTYEAAMRSANSSKWLSAME 497

Query: 2167 EEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDY 1988
            +E++SM  N V +L  +PHG K +G KWV+K KR + G+I++YK+RLVAKG+TQ+EGIDY
Sbjct: 498  DELESMRMNKVWDLEVIPHGAKTVGCKWVYKTKRDSRGNIERYKARLVAKGFTQREGIDY 557

Query: 1987 EETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQER 1808
             ETFSPV    S R+++A+VA+ DLEL QMDVKTAFLNG L+E ++M+QP G  V G+E 
Sbjct: 558  HETFSPVSTKDSFRIIMALVAHFDLELHQMDVKTAFLNGELEENVFMAQPKGFVVSGKEH 617

Query: 1807 KVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDI 1628
              C L+RSIYGLKQ+SRQWY++F Q+I   G+E  +ED+C+Y K  +   + L LYVDDI
Sbjct: 618  MGCHLRRSIYGLKQASRQWYIKFDQTIRKFGFEENKEDNCIYAKFRKGKYIFLVLYVDDI 677

Query: 1627 LLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILER 1448
            LLA +D + +  TK +LSSNF+M DMGEA+YVLG++I RDR ++ L LSQ++YI+N+L+R
Sbjct: 678  LLASSDKDLLAETKGFLSSNFDMKDMGEASYVLGIEIRRDRQKRVLGLSQKSYIENVLKR 737

Query: 1447 FRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFA 1268
            + MH C     P+ K        CPKN+ EK  M +VPYASA+GS+MYA +CTRPD++F 
Sbjct: 738  YNMHKCNASPGPIVKGDKFGEYQCPKNQYEKNKMKSVPYASAIGSIMYAQVCTRPDLAFT 797

Query: 1267 VGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFK 1091
             GM+ RYQ NPG  HWKAVK+  RYL+GT  L L Y     +++ G++DADW   +D  K
Sbjct: 798  TGMLGRYQKNPGIEHWKAVKKALRYLQGTKGLMLTYRRSNSLQIVGYADADWGGCRDTLK 857

Query: 1090 STSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAK 911
            STSGYVF L GGAI+W S KQ   A STM AE+VA   A  +A+W++ F+  L V +  +
Sbjct: 858  STSGYVFMLSGGAISWKSCKQTARASSTMHAEFVATYEATGQAIWIKKFVPGLRVVDSIE 917

Query: 910  EAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLT 731
              + +Y D+  A+ +  + K  G  K+I  + + +++ +    + + HI T++ML DPLT
Sbjct: 918  RPLRIYCDNEPAVFFSHNNKSSGSAKYIDIKCYIVKEKILDHTIQVEHIRTHQMLADPLT 977

Query: 730  KPIPRIAFQSHVENMGL 680
            K +P   F  H   MGL
Sbjct: 978  KGLPPSVFSKHAAGMGL 994


>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score =  553 bits (1424), Expect = e-154
 Identities = 306/699 (43%), Positives = 430/699 (61%), Gaps = 19/699 (2%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W   KP+L ++  WG        +    KL  R      I Y D SKGY  Y   P+  +
Sbjct: 420  WTXRKPSLRHIHIWGCPAETRIYNPHEKKLDSRTISGYFIGYPDKSKGYXFYC--PNHXV 477

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEIEESEDILPSSSEGRELVSQPIIAEYSGSDI 2360
              +E+ +  F+EN     S+  +  ++ EI    DI P       +V QP   +   ++ 
Sbjct: 478  RIVETXNARFLENGEISGSNEPRKXDIEEIRV--DIXPPFLPQEIIVPQPX-QQVEXNEQ 534

Query: 2359 H------PSGSEPLETQVFEP-----RRSERGKVPRRHFEIEGGILMYAAS------IED 2231
            H      P  + P+E  V  P     RRS+R + P     I    ++Y         I  
Sbjct: 535  HNRDGSLPXENIPIENXVEPPQPXPLRRSQRERRPA----ITDDYVVYLXESDFDIGIRK 590

Query: 2230 EPTSFREAISSD-CNKWLFAMQEEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADG 2054
            +P SF +A+ SD  +KW+ AM EE+KSM  N V +L++LP+  K +G KWVFK KR A G
Sbjct: 591  DPVSFSQAMESDDSSKWMEAMNEELKSMAHNGVWDLIELPNNCKPVGCKWVFKTKRDAKG 650

Query: 2053 SIDKYKSRLVAKGYTQQEGIDYEETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLN 1874
            +I+++K+RLVAKG+TQ+EGIDY++TFSPV +  S+R+++A+VA+ DLEL QMDVKTAFLN
Sbjct: 651  NIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLN 710

Query: 1873 GNLDEEIYMSQPMGSEVKGQERKVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEED 1694
            GNLDE+IYM Q  G   KG E  VC+LK+SIYGLKQ+SRQWY++F+ +IT  G++    D
Sbjct: 711  GNLDEDIYMEQXEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITYFGFKENXVD 770

Query: 1693 HCVYIKRSQESILILALYVDDILLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQII 1514
             C+Y+K S    + L LYVDDILLA +DL  +  TK++LS NF M DMGEANYV+G++I 
Sbjct: 771  QCIYLKVSGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVIGIEIF 830

Query: 1513 RDRSRKTLSLSQETYIKNILERFRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVP 1334
            RDRSR  L LSQ+ YI  +LERF M  C     P+ K   LS   CP+N  E++ M  +P
Sbjct: 831  RDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNXEREQMKKIP 890

Query: 1333 YASAVGSLMYAMLCTRPDISFAVGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCY-H 1157
            YAS VGSLMYA  CTRPDISFAVGM+ RYQS+PG  HWK  K++ RYL+GT +  L Y  
Sbjct: 891  YASXVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKXAKKVMRYLQGTKDYMLTYKR 950

Query: 1156 GEDIRLKGFSDADWSNDKDEFKSTSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAA 977
             E + + G+S++D+    +  KSTSG+VF L  GAI+W S+KQ   A STMEAE+VA   
Sbjct: 951  SEQLEVVGYSBSDYGGCLBSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFE 1010

Query: 976  AVQEAVWLRIFLKRLGVSEHAKEAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDM 797
            A    +WL+ F+  LGV +   + + +Y D+T+ + + K+ K+   +KH+  ++  +++ 
Sbjct: 1011 ASSHVLWLQNFISGLGVVDPIAKPLRIYCDNTATVFFSKNGKFSSGSKHMDLKYLVVKER 1070

Query: 796  VARRKVVLRHISTNRMLVDPLTKPIPRIAFQSHVENMGL 680
            V ++++ + +I T  M+ DPLTK +P  A+  HV  MGL
Sbjct: 1071 VQKQQMSIENIRTTLMVADPLTKGLPPKAYLEHVMRMGL 1109


>gb|ABF94883.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1390

 Score =  552 bits (1422), Expect = e-154
 Identities = 309/721 (42%), Positives = 432/721 (59%), Gaps = 41/721 (5%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G  P+L +LR WGS       +   GKL P+      I Y + SKGY  Y   P+   
Sbjct: 674  WTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYC--PNSYT 731

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEI------------------------------ 2450
              +E+R  VF+E++  R S + + ++L E                               
Sbjct: 732  KFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPAMPVIEVP 791

Query: 2449 --EESEDILPSSSE----GRELVSQPIIAEYSGSDIHPSGSEPLETQVFEPRRSERGKVP 2288
              E  E ++  S+E      E + QP I      + H          V  PRRSER    
Sbjct: 792  MNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQAPRRSERV--- 848

Query: 2287 RRHFEIEGGILMY---AASIEDEPTSFREAI-SSDCNKWLFAMQEEIKSMDKNDVLELVD 2120
             R   I     +Y    + +ED+PTS+ EA+ S+  ++WL AM++E+KSM  NDV +L +
Sbjct: 849  -RRSAIRDDYKVYNIEESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSMKLNDVWDLEE 907

Query: 2119 LPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSPVVRFASIRLV 1940
            +P G K +G KWV+K K  + G+I+K+K+RLVAKG+TQ+EGIDY ETFSPV    S R++
Sbjct: 908  IPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSPVSCKDSFRII 967

Query: 1939 LAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLKRSIYGLKQSS 1760
            +A+VA+ DLEL QMDVKTAFLNG+L+E++YM+QP G  +KG E   CRLKRSIYGLKQ+S
Sbjct: 968  MALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLKRSIYGLKQAS 1027

Query: 1759 RQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGNDLEGIVATKKW 1580
            RQWY++F  +I   G++   ED+C+Y K      + L LYVDDILLA +D+  +  TKK+
Sbjct: 1028 RQWYLKFDGTIKKFGFKENVEDNCIYSKFKNGRFIFLILYVDDILLASSDVSLLQETKKF 1087

Query: 1579 LSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDCKPIDTPMDKS 1400
            LSSNF+M D+GEA+YVLG++I RDR++  L LSQ+TYI+ +L++F M+ C     P+ K 
Sbjct: 1088 LSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRCSATPAPIMKG 1147

Query: 1399 CVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSRYQSNPGPNHW 1220
                   CP+N+ E   M   PYASAVGSL YA +CTRPD++F  G++ R+QSNPG  HW
Sbjct: 1148 EKYGASQCPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGRFQSNPGLEHW 1207

Query: 1219 KAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFKSTSGYVFKLGGGAITW 1043
            K VK++ RYL+GT  L L Y   E +++ G+SD+D++  KD  KSTSGYVF L GGAI+W
Sbjct: 1208 KLVKKVLRYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYVFTLAGGAISW 1265

Query: 1042 CSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLYSDSTSALAYV 863
             S KQ   A STM AE++A   A  +  WL+ F+  L V +  ++ + LY D+  A+ Y 
Sbjct: 1266 KSSKQTITAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLYCDNEPAVMYA 1325

Query: 862  KDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRIAFQSHVENMG 683
             + +  G  KHI  +++ ++D V  + + L HI T RML D LTK +P   F+ HV  MG
Sbjct: 1326 HNNQSSGAAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADALTKGLPPNVFKEHVAGMG 1385

Query: 682  L 680
            L
Sbjct: 1386 L 1386


>gb|ABF96044.1| transposon protein, putative, unclassified [Oryza sativa Japonica
            Group]
          Length = 1395

 Score =  551 bits (1421), Expect = e-154
 Identities = 310/731 (42%), Positives = 433/731 (59%), Gaps = 51/731 (6%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G  P+L +LR WGS       +   GKL P+      I Y + SKGY  Y   P+   
Sbjct: 669  WTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYC--PNSYT 726

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEI------------------------------ 2450
              +E+R  VF+E++  R S + + ++L E                               
Sbjct: 727  KFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPAMPVIEVP 786

Query: 2449 ------------EESEDILPSSSE----GRELVSQPIIAEYSGSDIHPSGSEPLETQVFE 2318
                        E  E ++  S+E      E + QP I      + H          V  
Sbjct: 787  APVVTPPVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQA 846

Query: 2317 PRRSERGKVPRRHFEIEGGILMY---AASIEDEPTSFREAI-SSDCNKWLFAMQEEIKSM 2150
            PRRSER     R   I     +Y    + +ED+PTS+ EA+ S+  ++WL AM++E+KSM
Sbjct: 847  PRRSERV----RRSAIRDDYKVYNIEESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSM 902

Query: 2149 DKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSP 1970
              NDV +L ++P G K +G KWV+K K  + G+I+K+K+RLVAKG+TQ+EGIDY ETFSP
Sbjct: 903  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 962

Query: 1969 VVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLK 1790
            V    S R+++A+VA+ DLEL QMDVKTAFLNG+L+E++YM+QP G  +KG E   CRLK
Sbjct: 963  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLK 1022

Query: 1789 RSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGND 1610
            RSIYGLKQ+SRQWY++F  +I   G++   ED+C+Y K      + L LYVDDILLA +D
Sbjct: 1023 RSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSD 1082

Query: 1609 LEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDC 1430
            +  +  TKK+LSSNF+M D+GEA+YVLG++I RDR++  L LSQ+TYI+ +L++F M+ C
Sbjct: 1083 VSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRC 1142

Query: 1429 KPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSR 1250
                 P+ K        CP+N+ E   M   PYASAVGSL YA +CTRPD++F  G++ R
Sbjct: 1143 SATPAPIMKGEKYGASQCPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGR 1202

Query: 1249 YQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFKSTSGYV 1073
            +QSNPG  HWK VK++ RYL+GT  L L Y   E +++ G+SD+D++  KD  KSTSGYV
Sbjct: 1203 FQSNPGLEHWKLVKKVLRYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYV 1260

Query: 1072 FKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLY 893
            F L GGAI+W S KQ   A STM AE++A   A  +  WL+ F+  L V +  ++ + LY
Sbjct: 1261 FTLAGGAISWKSSKQTITAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLY 1320

Query: 892  SDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRI 713
             D+  A+ Y  + +  G  KHI  +++ ++D V  + + L HI T RML DPLTK +P  
Sbjct: 1321 CDNEPAVMYTHNNQSSGAAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPN 1380

Query: 712  AFQSHVENMGL 680
             F+ HV  MGL
Sbjct: 1381 VFKEHVAGMGL 1391


>emb|CAH67504.1| OSIGBa0134H18.6 [Oryza sativa Indica Group]
          Length = 1261

 Score =  550 bits (1418), Expect = e-153
 Identities = 310/731 (42%), Positives = 432/731 (59%), Gaps = 51/731 (6%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G  P+L +LR WGS       +   GKL P+      I Y + SKGY  Y   P+   
Sbjct: 535  WTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYC--PNSYT 592

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEI------------------------------ 2450
              +E+R  VF+E++  R S + + ++L E                               
Sbjct: 593  KFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPTPSTQEPFFSLPADVVPAMPVIEVP 652

Query: 2449 ------------EESEDILPSSSE----GRELVSQPIIAEYSGSDIHPSGSEPLETQVFE 2318
                        E  E ++  S+E      E + QP I      + H          V  
Sbjct: 653  APVVTPPVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPIQETHQEPQVQDVPNVQA 712

Query: 2317 PRRSERGKVPRRHFEIEGGILMY---AASIEDEPTSFREAI-SSDCNKWLFAMQEEIKSM 2150
            PRRSER     R   I     +Y    + +ED+PTS+ EA+ S+  ++WL AM++E+KSM
Sbjct: 713  PRRSERV----RRSAIRDDYKVYNIEESHMEDDPTSYEEAMRSARSSEWLEAMKDEMKSM 768

Query: 2149 DKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSP 1970
              NDV +L ++P G K +G KWV+K K  + G+I+K+K+RLVAKG+TQ+EGIDY ETFSP
Sbjct: 769  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 828

Query: 1969 VVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLK 1790
            V    S R+++A+VA+ DLEL QMDVKTAFLNG+L+E++YM+QP G   KG E   CRLK
Sbjct: 829  VSCKDSFRIIIALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVTKGNENMGCRLK 888

Query: 1789 RSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGND 1610
            RSIYGLKQ+SRQWY++F  +I   G++   ED+C+Y K      + L LYVDDILLA +D
Sbjct: 889  RSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSD 948

Query: 1609 LEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDC 1430
            +  +  TKK+LSSNF+M D+GEA+YVLG++I RDR++  L LSQ+TYI+ +L++F M+ C
Sbjct: 949  VSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRC 1008

Query: 1429 KPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSR 1250
            +    P+ K        CP+N+ E   M   PYASAVGSL YA +CTRPD++F  G++ R
Sbjct: 1009 RATPAPIMKGEKYGASQCPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGR 1068

Query: 1249 YQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFKSTSGYV 1073
            +QSNPG  HWK VK++ RYL+GT  L L Y   E +++ G+SD D++  KD  KSTSGYV
Sbjct: 1069 FQSNPGLEHWKLVKKVLRYLQGTKGLMLSYRRSESLQIVGYSDPDFA--KDNTKSTSGYV 1126

Query: 1072 FKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLY 893
            F L GGAI+W S KQ   A STM AE++A   A  +  WL+ F+  L V +  ++ + LY
Sbjct: 1127 FTLAGGAISWKSSKQTITAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLY 1186

Query: 892  SDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRI 713
             D+  A+ Y  + +  G  KHI  +++ ++D V  + + L HI T RML DPLTK +P  
Sbjct: 1187 CDNEPAVMYAHNNQSSGADKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPN 1246

Query: 712  AFQSHVENMGL 680
             F+ HV  MGL
Sbjct: 1247 VFKEHVAGMGL 1257


>emb|CAE04259.3| OSJNBa0089N06.20 [Oryza sativa Japonica Group]
          Length = 1405

 Score =  550 bits (1417), Expect = e-153
 Identities = 309/731 (42%), Positives = 433/731 (59%), Gaps = 51/731 (6%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G  P+L +LR WGS       +   GKL P+      I Y + SKGY  Y   P+   
Sbjct: 679  WTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYC--PNSYT 736

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEI------------------------------ 2450
              +E+R  VF+E++  R S + + ++L E                               
Sbjct: 737  KFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPAMPVIEVP 796

Query: 2449 ------------EESEDILPSSSE----GRELVSQPIIAEYSGSDIHPSGSEPLETQVFE 2318
                        E  E ++  S+E      E + QP I      + H          V  
Sbjct: 797  APVVTPPVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQA 856

Query: 2317 PRRSERGKVPRRHFEIEGGILMY---AASIEDEPTSFREAI-SSDCNKWLFAMQEEIKSM 2150
            PRRSER     R   I     +Y    + +ED+PTS+ EA+ S+  ++WL AM++E++SM
Sbjct: 857  PRRSERV----RRSAIRDDYKVYNIEESHMEDDPTSYEEAMRSARSSEWLEAMKDEMESM 912

Query: 2149 DKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSP 1970
              NDV +L ++P G K +G KWV+K K  + G+I+K+K+RLVAKG+TQ+EGIDY ETFSP
Sbjct: 913  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 972

Query: 1969 VVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLK 1790
            V    S R+++A+VA+ DLEL QMDVKTAFLNG+L+E++YM+QP G  +KG E   CRLK
Sbjct: 973  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLK 1032

Query: 1789 RSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGND 1610
            RSIYGLKQ+SRQWY++F  +I   G++   ED+C+Y K      + L LYVDDILLA +D
Sbjct: 1033 RSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSD 1092

Query: 1609 LEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDC 1430
            +  +  TKK+LSSNF+M D+GEA+YVLG++I RDR++  L LSQ+TYI+ +L++F M+ C
Sbjct: 1093 VSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRC 1152

Query: 1429 KPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSR 1250
                 P+ K        CP+N+ E   M   PYASAVGSL YA +CTRPD++F  G++ R
Sbjct: 1153 SATPAPIMKGEKYGASQCPRNQYELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGR 1212

Query: 1249 YQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFKSTSGYV 1073
            +QSNPG  HWK VK++ RYL+GT  L L Y   E +++ G+SD+D++  KD  KSTSGYV
Sbjct: 1213 FQSNPGLEHWKLVKKVLRYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYV 1270

Query: 1072 FKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLY 893
            F L GGAI+W S KQ   A STM AE++A   A  +  WL+ F+  L V +  ++ + LY
Sbjct: 1271 FTLAGGAISWKSSKQTITAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLY 1330

Query: 892  SDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRI 713
             D+  A+ Y  + +  G  KHI  +++ ++D V  + + L HI T RML DPLTK +P  
Sbjct: 1331 CDNEPAVMYAHNNQSSGAAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPN 1390

Query: 712  AFQSHVENMGL 680
             F+ HV  MGL
Sbjct: 1391 VFKEHVAGMGL 1401


>gb|AAD12997.1| gag-pol polyprotein [Zea mays]
          Length = 1406

 Score =  550 bits (1417), Expect = e-153
 Identities = 309/737 (41%), Positives = 430/737 (58%), Gaps = 57/737 (7%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G KP L     WG        +   GKL  R      I Y D SKGY  Y   P    
Sbjct: 668  WIGRKPTLNYFHIWGCPAEARIFNPGQGKLDERTTSCHFIGYPDRSKGYRFY--CPDRQT 725

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFE---------IEESEDILP------------- 2426
              IE+R  +F+E+D  + S + + ++L E         +EE    +P             
Sbjct: 726  KFIETRHAIFLEDDMIKGSKVLREVDLQEKRIYVPFPMVEEPHFSIPTVVTPTVTPTVGE 785

Query: 2425 --------SSSEGRELVSQPI-------IAEYSGSD---IHPSGSEPLETQV-FEPRRSE 2303
                    SS+   E V+ P        +A+ S  D   + PS +   E QV  EP  S 
Sbjct: 786  TPTANVASSSATTTEQVASPSAHIGPEPVAQDSSEDDDSVAPSDAPLQEPQVESEPETSL 845

Query: 2302 RGKVPRRHFEIEGGILMYAA--------------SIEDEPTSFREAI-SSDCNKWLFAMQ 2168
            R     R   I     +YAA                E +PT++  A+ S++ +KWL AM+
Sbjct: 846  RRSQRLRKSAIPDDYEVYAAENIECDEIHMSEDIDTEGDPTTYEAAMRSANSSKWLSAME 905

Query: 2167 EEIKSMDKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDY 1988
            +E++SM  N V +L  +PHG K +G KWV+K KR + G+I++YK+RLVAKG+TQ+EGIDY
Sbjct: 906  DELESMRMNKVWDLEVIPHGAKTVGCKWVYKTKRDSRGNIERYKARLVAKGFTQREGIDY 965

Query: 1987 EETFSPVVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQER 1808
             ETFSPV    S R+++A+VA+ DLEL QM VKTAFLNG L+E ++M+QP G  V G+E 
Sbjct: 966  HETFSPVSTKDSFRIIMALVAHFDLELHQMGVKTAFLNGELEENVFMAQPKGFVVSGKEH 1025

Query: 1807 KVCRLKRSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDI 1628
              C L+RSIYGLKQ+SRQWY++F Q+I   G+E  +ED+C+Y K  +   + L LYVDDI
Sbjct: 1026 MGCHLRRSIYGLKQASRQWYIKFDQTIRKFGFEENKEDNCIYAKFRKGKYIFLVLYVDDI 1085

Query: 1627 LLAGNDLEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILER 1448
            LLA +D + +  TK +LSSNF+M DMGEA+YVLG++I RDR +  L LSQ++YI+N+L+R
Sbjct: 1086 LLASSDKDLLAETKGFLSSNFDMKDMGEASYVLGIEIHRDRQKGVLGLSQKSYIENVLKR 1145

Query: 1447 FRMHDCKPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFA 1268
            + MH C     P+ K        CPKN+ EK  M +VPYASA+GS+MYA +CTRPD++F 
Sbjct: 1146 YNMHKCNASPGPIVKGDKFGEYQCPKNQYEKNKMKSVPYASAIGSIMYAQVCTRPDLAFT 1205

Query: 1267 VGMVSRYQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFK 1091
             GM+ RYQ NPG  HWKAVK+  RYL+GT  L L Y     +++ G++DADW   +D  K
Sbjct: 1206 TGMLGRYQKNPGIEHWKAVKKALRYLQGTKGLMLTYRRSNSLQIVGYADADWGGCRDTLK 1265

Query: 1090 STSGYVFKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAK 911
            STSGYVF L GGAI+W S KQ   A STM AE+VA   A  +A+W++ F+  L V +  +
Sbjct: 1266 STSGYVFMLSGGAISWKSCKQTARASSTMHAEFVATYEATGQAIWIKKFVPGLRVVDSIE 1325

Query: 910  EAVLLYSDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLT 731
              + +Y D+  A+ +  + K  G  K+I  + + +++ +    + + HI T++ML DPLT
Sbjct: 1326 RPLRIYCDNEPAVFFSHNNKSSGSAKYIDIKCYIVKEKILDHTIQVEHIRTHQMLADPLT 1385

Query: 730  KPIPRIAFQSHVENMGL 680
            K +P   F  H   MGL
Sbjct: 1386 KGLPPSVFSKHAAGMGL 1402


>gb|AAT69633.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1358

 Score =  549 bits (1415), Expect = e-153
 Identities = 309/731 (42%), Positives = 433/731 (59%), Gaps = 51/731 (6%)
 Frame = -3

Query: 2719 WKGEKPNLGNLRPWGSAGYVHNASHVYGKLGPRARKLVCIRYYDCSKGYVMYGEHPSGGM 2540
            W G  P+L +LR WGS       +   GKL P+      I Y + SKGY  Y   P+   
Sbjct: 632  WTGRVPSLTHLRVWGSPAEAKVFNPNIGKLDPKTVSCHFIGYPERSKGYRFYC--PNSYT 689

Query: 2539 TEIESRDIVFIENDFPRISDINKNLELFEI------------------------------ 2450
              +E+R  VF+E++  R S + + ++L E                               
Sbjct: 690  KFVETRHAVFLEDEMIRGSSVVREIDLEERRVSVPAPSTQEPFFSLPADVVPAMPVIEVP 749

Query: 2449 ------------EESEDILPSSSE----GRELVSQPIIAEYSGSDIHPSGSEPLETQVFE 2318
                        E  E ++  S+E      E + QP I      + H          V  
Sbjct: 750  APVVTPPVATMNESEEPVIQDSTEMVATPEEELQQPQIDNVPVQETHQEPQVQDVPNVQA 809

Query: 2317 PRRSERGKVPRRHFEIEGGILMY---AASIEDEPTSFREAI-SSDCNKWLFAMQEEIKSM 2150
            PRRSER     R   I     +Y    + +ED+PTS+ EA+ S+  ++WL AM++E++SM
Sbjct: 810  PRRSERV----RRSAIRDDYKVYNIEESHMEDDPTSYEEAMRSARSSEWLEAMKDEMESM 865

Query: 2149 DKNDVLELVDLPHGRKAIGNKWVFKIKRKADGSIDKYKSRLVAKGYTQQEGIDYEETFSP 1970
              NDV +L ++P G K +G KWV+K K  + G+I+K+K+RLVAKG+TQ+EGIDY ETFSP
Sbjct: 866  KLNDVWDLEEIPKGAKTVGCKWVYKTKYDSRGNIEKFKARLVAKGFTQREGIDYNETFSP 925

Query: 1969 VVRFASIRLVLAIVAYLDLELFQMDVKTAFLNGNLDEEIYMSQPMGSEVKGQERKVCRLK 1790
            V    S R+++A+VA+ DLEL QMDVKTAFLNG+L+E++YM+QP G  +KG E   CRLK
Sbjct: 926  VSCKDSFRIIMALVAHYDLELHQMDVKTAFLNGDLEEKVYMAQPKGFVMKGNENMGCRLK 985

Query: 1789 RSIYGLKQSSRQWYMRFHQSITSAGYEMIEEDHCVYIKRSQESILILALYVDDILLAGND 1610
            RSIYGLKQ+SRQWY++F  +I   G++   ED+C+Y K      + L LYVDDILLA +D
Sbjct: 986  RSIYGLKQASRQWYLKFDGTIKKFGFQENVEDNCIYSKFKNGRFIFLILYVDDILLASSD 1045

Query: 1609 LEGIVATKKWLSSNFEMTDMGEANYVLGVQIIRDRSRKTLSLSQETYIKNILERFRMHDC 1430
            +  +  TKK+LSSNF+M D+GEA+YVLG++I RDR++  L LSQ+TYI+ +L++F M+ C
Sbjct: 1046 VSLLQETKKFLSSNFDMKDLGEASYVLGIEIHRDRTKYALGLSQKTYIEKVLKKFNMYRC 1105

Query: 1429 KPIDTPMDKSCVLSNDHCPKNEQEKKYMSNVPYASAVGSLMYAMLCTRPDISFAVGMVSR 1250
                 P+ K        CP+N+ E   M   PYASAVGSL YA +CTRPD++F  G++ R
Sbjct: 1106 SATPAPIMKGEKYGASQCPRNQFELNEMKTKPYASAVGSLQYAQVCTRPDLAFVTGLLGR 1165

Query: 1249 YQSNPGPNHWKAVKRIFRYLKGTANLPLCY-HGEDIRLKGFSDADWSNDKDEFKSTSGYV 1073
            +QSNPG  HWK VK++ RYL+GT  L L Y   E +++ G+SD+D++  KD  KSTSGYV
Sbjct: 1166 FQSNPGLEHWKLVKKVLRYLQGTKGLMLSYRRSESLQIVGYSDSDFA--KDNTKSTSGYV 1223

Query: 1072 FKLGGGAITWCSQKQKCIALSTMEAEYVALAAAVQEAVWLRIFLKRLGVSEHAKEAVLLY 893
            F L GGAI+W S KQ   A STM AE++A   A  +  WL+ F+  L V +  ++ + LY
Sbjct: 1224 FTLAGGAISWKSSKQTITAGSTMYAEFIACYEATGQVNWLKKFIPGLKVVDSIEKPLKLY 1283

Query: 892  SDSTSALAYVKDPKYHGKTKHIGRRFHFIRDMVARRKVVLRHISTNRMLVDPLTKPIPRI 713
             D+  A+ Y  + +  G  KHI  +++ ++D V  + + L HI T RML DPLTK +P  
Sbjct: 1284 CDNEPAVMYAHNNQSSGAAKHIDIKYYVVKDKVRDQTISLEHIKTERMLADPLTKGLPPN 1343

Query: 712  AFQSHVENMGL 680
             F+ HV  MGL
Sbjct: 1344 VFKEHVAGMGL 1354