BLASTX nr result
ID: Papaver31_contig00022579
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver31_contig00022579 (422 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CDP14564.1| unnamed protein product [Coffea canephora] 60 5e-07 ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe... 58 2e-06 >emb|CDP14564.1| unnamed protein product [Coffea canephora] Length = 1371 Score = 60.5 bits (145), Expect = 5e-07 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 5/116 (4%) Frame = -1 Query: 353 DNEIRHGGLCVPPGKDRGIFRTPEKKSLLGLDVLANAKR-----DPVFRVPKRYRRNGAA 189 D E GG V PGKDR +FR E+KSLLGLDVLANAKR D F++P+ + A Sbjct: 131 DPEKTTGGGLVAPGKDRVVFRPSERKSLLGLDVLANAKRSGSDVDVGFKMPRERVASVVA 190 Query: 188 DDSPRSERRDYRGGDTRSPESRSVRQRYDHDGTKAPNYRNRDDQRYRGRKSDWDDG 21 ER G D +++ V H K +YR + R+S +G Sbjct: 191 SLDEDEERSTSSGIDEGENDAKEV-----HRNLKTRHYRESSTSKTSKRESTVTEG 241 >ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Vitis vinifera] gi|731376174|ref|XP_010655515.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Vitis vinifera] gi|731376178|ref|XP_010655522.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Vitis vinifera] Length = 1289 Score = 58.2 bits (139), Expect = 2e-06 Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 19/89 (21%) Frame = -1 Query: 212 RYRRNGAADDSPRSERRDYRGGDTRSPESRSVRQRYDHDG---TKAPNYRNRDDQRYRGR 42 RY R D+ SERRDY+ DTRS E+R VR RYD+D + R R Q Y G+ Sbjct: 167 RYER-----DNRNSERRDYKD-DTRS-ENRRVRHRYDYDDREQNREGEARGRYAQEYNGQ 219 Query: 41 ----------------KSDWDDGRWEWED 3 +SDWDDGRWEWE+ Sbjct: 220 YGRKRSKYEVSRRTPGRSDWDDGRWEWEE 248