BLASTX nr result

ID: Papaver31_contig00022579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00022579
         (422 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14564.1| unnamed protein product [Coffea canephora]             60   5e-07
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...    58   2e-06

>emb|CDP14564.1| unnamed protein product [Coffea canephora]
          Length = 1371

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
 Frame = -1

Query: 353 DNEIRHGGLCVPPGKDRGIFRTPEKKSLLGLDVLANAKR-----DPVFRVPKRYRRNGAA 189
           D E   GG  V PGKDR +FR  E+KSLLGLDVLANAKR     D  F++P+    +  A
Sbjct: 131 DPEKTTGGGLVAPGKDRVVFRPSERKSLLGLDVLANAKRSGSDVDVGFKMPRERVASVVA 190

Query: 188 DDSPRSERRDYRGGDTRSPESRSVRQRYDHDGTKAPNYRNRDDQRYRGRKSDWDDG 21
                 ER    G D    +++ V     H   K  +YR     +   R+S   +G
Sbjct: 191 SLDEDEERSTSSGIDEGENDAKEV-----HRNLKTRHYRESSTSKTSKRESTVTEG 241


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Vitis vinifera] gi|731376174|ref|XP_010655515.1|
           PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA
           helicase PRP16 [Vitis vinifera]
           gi|731376178|ref|XP_010655522.1| PREDICTED:
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Vitis vinifera]
          Length = 1289

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 19/89 (21%)
 Frame = -1

Query: 212 RYRRNGAADDSPRSERRDYRGGDTRSPESRSVRQRYDHDG---TKAPNYRNRDDQRYRGR 42
           RY R     D+  SERRDY+  DTRS E+R VR RYD+D     +    R R  Q Y G+
Sbjct: 167 RYER-----DNRNSERRDYKD-DTRS-ENRRVRHRYDYDDREQNREGEARGRYAQEYNGQ 219

Query: 41  ----------------KSDWDDGRWEWED 3
                           +SDWDDGRWEWE+
Sbjct: 220 YGRKRSKYEVSRRTPGRSDWDDGRWEWEE 248