BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00018277
         (720 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   160   8e-37
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   160   1e-36
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   157   7e-36
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   151   4e-34
gb|KDO48040.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48039.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48038.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   149   2e-33
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   148   3e-33
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   145   2e-32
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   144   4e-32
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   143   1e-31
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   143   1e-31
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   141   4e-31
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   141   4e-31

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  160 bits (405), Expect = 8e-37
 Identities = 104/197 (52%), Positives = 131/197 (66%), Gaps = 7/197 (3%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           S+FYYSD+TEKL   +EHG T Y Q+ S KT LI AKK+S+ +GP+FPS N++TQSI AL
Sbjct: 18  STFYYSDLTEKLSSANEHGLTHY-QITSTKT-LIVAKKSSN-YGPSFPSSNRNTQSIKAL 74

Query: 404 TEHLESSFVPSTT-DEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERK 228
            EH++++  PST   +F    D                 A+LLLQKSMLEKQWNLSFER 
Sbjct: 75  KEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVE----ALLLLQKSMLEKQWNLSFERT 130

Query: 227 RTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQ 54
            +   P  +S K I V  SG+SARQRRI+ R KN   +   ++    KQ+ S VSPELLQ
Sbjct: 131 DSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQ 190

Query: 53  NKLQGYVKGVVSEELLT 3
           N+L+GYVKGVVSEELL+
Sbjct: 191 NRLKGYVKGVVSEELLS 207


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  160 bits (404), Expect = 1e-36
 Identities = 96/195 (49%), Positives = 129/195 (66%), Gaps = 5/195 (2%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 402
           S+FYYSD+T++L   ++HG  QY   A+   N+I A+K+S+ FG +FPSNQH QSI AL 
Sbjct: 18  STFYYSDVTDRLLSVYDHGLAQYQ--ATSAKNVIIARKSSN-FGDSFPSNQHIQSIRALK 74

Query: 401 EHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRT 222
           EH+ +   PST D +  S                   A+LLLQK +LEKQWNLSFE+  T
Sbjct: 75  EHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVD---ALLLLQKFLLEKQWNLSFEQTIT 131

Query: 221 VVVPGEESNKNIEVARSGISARQRRISTRNK--NHVSNLIVLRRKKQIGSIVSPELLQNK 48
              PGEE++K I+V RSG+SARQRR STR    +   +++   ++KQ+GS+VSPELL++ 
Sbjct: 132 DGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPTKRKQLGSMVSPELLKSH 191

Query: 47  LQGYVKGVVSEELLT 3
             GYVKGV+SEELLT
Sbjct: 192 -YGYVKGVISEELLT 205


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
           gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Nelumbo nucifera]
           gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  157 bits (397), Expect = 7e-36
 Identities = 96/195 (49%), Positives = 131/195 (67%), Gaps = 5/195 (2%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 402
           S+FYYSD+T++L   ++HG  QY Q A  K+ ++ AKK+S+ F  +F SN+H QSI AL 
Sbjct: 28  STFYYSDVTDRLASVYDHGLAQY-QTAPSKS-VVIAKKSSN-FDHDFASNRHNQSIKALK 84

Query: 401 EHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRT 222
           EHL ++F  ST D +  + D                 A+LLLQKS+LEKQWNLSFE+   
Sbjct: 85  EHL-NTFSTSTEDMWLQTSDHLEEGNSDLDYSLE---ALLLLQKSLLEKQWNLSFEKSMR 140

Query: 221 VVVPGEESNKNIEVARSGISARQRRISTRNK--NHVSNLIVLRRKKQIGSIVSPELLQNK 48
              P EE+ K I+V RSG+SARQRR +TR K  N  S+++   R++ +GS+VS ELLQ++
Sbjct: 141 KGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTTRRRHLGSMVSEELLQSR 200

Query: 47  LQGYVKGVVSEELLT 3
           L+GYVKGV+SEELLT
Sbjct: 201 LKGYVKGVISEELLT 215


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
           gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
           polymerase sigma factor sigA [Jatropha curcas]
           gi|643732469|gb|KDP39565.1| hypothetical protein
           JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  151 bits (382), Expect = 4e-34
 Identities = 95/196 (48%), Positives = 128/196 (65%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           S+FYYSD+TEKL   ++HG T Y   +S   N+I AKK+S+ +G +F S N++ QSI AL
Sbjct: 18  STFYYSDLTEKLFNVNDHGLTHYQ--SSSTKNVIVAKKSSN-YGSSFQSSNRNAQSIKAL 74

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++  PST    +   +                EA+LLLQKSMLEKQWNLSFER  
Sbjct: 75  KEHVDTASSPSTAATGF---ETFVDIEEASSDLDYSVEALLLLQKSMLEKQWNLSFERTA 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 51
           +   P  +S K I +  SG+SARQRRI+TR KN + +  +++    KQ+ S VSPELL N
Sbjct: 132 SSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQASGFKQLKSAVSPELLLN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKG+VSEELLT
Sbjct: 192 RLKGYVKGIVSEELLT 207


>gb|KDO48040.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 301

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48039.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 391

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48038.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 330

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 417

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 419

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 443

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 499

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
           gi|641828897|gb|KDO48033.1| hypothetical protein
           CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 485

 Score =  149 bits (376), Expect = 2e-33
 Identities = 95/196 (48%), Positives = 132/196 (67%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  +L++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
           +L+GYVKGVVSEELLT
Sbjct: 192 RLKGYVKGVVSEELLT 207


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  148 bits (374), Expect = 3e-33
 Identities = 96/196 (48%), Positives = 131/196 (66%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  VL++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
            L+GYVKGVVSEELLT
Sbjct: 192 HLKGYVKGVVSEELLT 207


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  145 bits (367), Expect = 2e-32
 Identities = 95/196 (48%), Positives = 130/196 (66%), Gaps = 6/196 (3%)
 Frame = -2

Query: 572 SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++F  ++T E W  P                 EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 51
               P ++++K + V  SG+SARQRR++++ K    N  V ++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQLRSMISPELIQN 191

Query: 50  KLQGYVKGVVSEELLT 3
            L+GYVKGVVSEELLT
Sbjct: 192 HLKGYVKGVVSEELLT 207


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
           gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
           polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  144 bits (364), Expect = 4e-32
 Identities = 91/195 (46%), Positives = 129/195 (66%), Gaps = 6/195 (3%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSD+TEKL   ++HG T Y   A+ K N++ AKK+S+ +GPNFPS N+++ SI AL
Sbjct: 19  SSFYYSDLTEKLSSVNDHGIT-YCPTATTK-NVVVAKKSSN-YGPNFPSSNRNSHSIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++   S    ++ + D                EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 51
           +     +++NK I V  SG+SARQRR++ R KN   +  + +    K + S++SP+LLQN
Sbjct: 133 SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVISPDLLQN 192

Query: 50  KLQGYVKGVVSEELL 6
           +L+GYVKGVVS+E+L
Sbjct: 193 RLKGYVKGVVSDEVL 207


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  143 bits (360), Expect = 1e-31
 Identities = 91/195 (46%), Positives = 129/195 (66%), Gaps = 6/195 (3%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSD+TEKL   ++HG T Y+  A+ K N+I AKK+S+ +GP+FPS N+++ SI AL
Sbjct: 19  SSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++   S    ++ + D                EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 51
           +     +++NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN
Sbjct: 133 SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQN 192

Query: 50  KLQGYVKGVVSEELL 6
           +L+GYVKGVVS+E+L
Sbjct: 193 RLKGYVKGVVSDEVL 207


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  143 bits (360), Expect = 1e-31
 Identities = 91/195 (46%), Positives = 129/195 (66%), Gaps = 6/195 (3%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 405
           SSFYYSD+TEKL   ++HG T Y+  A+ K N+I AKK+S+ +GP+FPS N+++ SI AL
Sbjct: 19  SSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKAL 75

Query: 404 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
            EH++++   S    ++ + D                EA+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 51
           +     +++NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN
Sbjct: 133 SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQN 192

Query: 50  KLQGYVKGVVSEELL 6
           +L+GYVKGVVS+E+L
Sbjct: 193 RLKGYVKGVVSDEVL 207


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  141 bits (356), Expect = 4e-31
 Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 402
           SSF YSDI EKL   +++GS+ +HQ +S K+ LI AKK+S+       SN+  QSI AL 
Sbjct: 19  SSFSYSDIIEKLSYANDYGSS-HHQTSSTKS-LIVAKKSSNCSQSLPSSNRRAQSIKALK 76

Query: 401 EHLESSFVPSTTDE-FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
           EH++S+ + ST +  F GS D                 A+LLLQKSMLEKQW LSFER  
Sbjct: 77  EHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTV 132

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLR-RKKQIGSIVSPELLQNK 48
               P  + +K I V  SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++
Sbjct: 133 FTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSR 192

Query: 47  LQGYVKGVVSEELLT 3
           L+GYVKGVVS+ELL+
Sbjct: 193 LKGYVKGVVSDELLS 207


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  141 bits (356), Expect = 4e-31
 Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
 Frame = -2

Query: 572 SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 402
           SSF YSDI EKL   +++GS+ +HQ +S K+ LI AKK+S+       SN+  QSI AL 
Sbjct: 19  SSFSYSDIIEKLSYANDYGSS-HHQTSSTKS-LIVAKKSSNCSQSLPSSNRRAQSIKALK 76

Query: 401 EHLESSFVPSTTDE-FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKR 225
           EH++S+ + ST +  F GS D                 A+LLLQKSMLEKQW LSFER  
Sbjct: 77  EHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTV 132

Query: 224 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLR-RKKQIGSIVSPELLQNK 48
               P  + +K I V  SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++
Sbjct: 133 FTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSR 192

Query: 47  LQGYVKGVVSEELLT 3
           L+GYVKGVVS+ELL+
Sbjct: 193 LKGYVKGVVSDELLS 207