BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00018276
         (549 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   148   2e-33
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   147   4e-33
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   145   9e-33
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   139   6e-31
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   135   1e-29
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   135   1e-29
gb|KDO48040.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48039.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48038.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   132   1e-28
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   131   2e-28
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   130   4e-28
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   130   4e-28
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   130   5e-28
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   129   1e-27

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  148 bits (373), Expect = 2e-33
 Identities = 99/189 (52%), Positives = 123/189 (65%), Gaps = 7/189 (3%)
 Frame = -2

Query: 548 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 381
           TEKL   +EHG T Y Q+ S KT LI AKK+S+ +GP FPS NR++QSI AL EH++++S
Sbjct: 26  TEKLSSANEHGLTHY-QITSTKT-LIVAKKSSN-YGPSFPSSNRNTQSIKALKEHVDTAS 82

Query: 380 VPSTT-DEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGE 204
            PST   +F    D                 A+LLLQKSMLEKQWNLSFER  +   P  
Sbjct: 83  APSTAATQFKTFNDMEEESSDLDYSVE----ALLLLQKSMLEKQWNLSFERTDSSDSPSR 138

Query: 203 ESNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVK 30
           +S K I V  SG+SARQRRI+ R KN   +   ++    KQ+ S VSPELLQN+L+GYVK
Sbjct: 139 KSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQNRLKGYVK 198

Query: 29  GVVSEELLT 3
           GVVSEELL+
Sbjct: 199 GVVSEELLS 207


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
           gi|720061510|ref|XP_010275190.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Nelumbo nucifera]
           gi|720061513|ref|XP_010275191.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  147 bits (370), Expect = 4e-33
 Identities = 90/181 (49%), Positives = 120/181 (66%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 LHEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE 360
           +++HG  QY Q A  K S++ AKK+S+ F   F SNRH+QSI AL EHL + S  ++T++
Sbjct: 42  VYDHGLAQY-QTAPSK-SVVIAKKSSN-FDHDFASNRHNQSIKALKEHLNTFS--TSTED 96

Query: 359 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 180
            W                    EA+LLLQKS+LEKQWNLSFE+      P EE+ K I+V
Sbjct: 97  MWLQTS--DHLEEGNSDLDYSLEALLLLQKSLLEKQWNLSFEKSMRKGAPKEETRKKIQV 154

Query: 179 VRSGISARQRRISTRNK--NHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELL 6
            RSG+SARQRR +TR K  N  S++M   R++ +GS+VS ELLQ++L+GYVKGV+SEELL
Sbjct: 155 TRSGVSARQRRTNTRKKYLNTDSSMMQTTRRRHLGSMVSEELLQSRLKGYVKGVISEELL 214

Query: 5   T 3
           T
Sbjct: 215 T 215


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  145 bits (367), Expect = 9e-33
 Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 LHEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE 360
           +++HG  QY   A+   ++I A+K+S+ FG  FPSN+H QSI AL EH+ + S PST D 
Sbjct: 32  VYDHGLAQYQ--ATSAKNVIIARKSSN-FGDSFPSNQHIQSIRALKEHVNTLSTPSTADV 88

Query: 359 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 180
           +  S                   A+LLLQK +LEKQWNLSFE+  T   PGEE++K I+V
Sbjct: 89  WLQSSGLLEEENTDLDYSVD---ALLLLQKFLLEKQWNLSFEQTITDGAPGEETHKKIQV 145

Query: 179 VRSGISARQRRISTRNK--NHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELL 6
            RSG+SARQRR STR    +   ++M   ++KQ+GS+VSPELL++   GYVKGV+SEELL
Sbjct: 146 TRSGVSARQRRTSTRRTCLSPKHSIMQPTKRKQLGSMVSPELLKSH-YGYVKGVISEELL 204

Query: 5   T 3
           T
Sbjct: 205 T 205


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
           gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
           polymerase sigma factor sigA [Jatropha curcas]
           gi|643732469|gb|KDP39565.1| hypothetical protein
           JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  139 bits (351), Expect = 6e-31
 Identities = 88/188 (46%), Positives = 116/188 (61%), Gaps = 6/188 (3%)
 Frame = -2

Query: 548 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 381
           TEKL   ++HG T Y    S  T  +   K S ++G  F S NR++QSI AL EH++++S
Sbjct: 26  TEKLFNVNDHGLTHYQ---SSSTKNVIVAKKSSNYGSSFQSSNRNAQSIKALKEHVDTAS 82

Query: 380 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 201
            PST    +   +                EA+LLLQKSMLEKQWNLSFER  +   P  +
Sbjct: 83  SPSTAATGF---ETFVDIEEASSDLDYSVEALLLLQKSMLEKQWNLSFERTASSDSPSTK 139

Query: 200 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 27
           S K I +  SG+SARQRRI+TR KN + +  +++    KQ+ S VSPELL N+L+GYVKG
Sbjct: 140 SQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQASGFKQLKSAVSPELLLNRLKGYVKG 199

Query: 26  VVSEELLT 3
           +VSEELLT
Sbjct: 200 IVSEELLT 207


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  135 bits (340), Expect = 1e-29
 Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
 Frame = -2

Query: 536 HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE- 360
           +++GS+ +HQ +S K SLI AKK+S+       SNR +QSI AL EH++S+S+ ST +  
Sbjct: 34  NDYGSS-HHQTSSTK-SLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPL 91

Query: 359 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 180
           F GS D                 A+LLLQKSMLEKQW LSFER      P  + +K I V
Sbjct: 92  FQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPV 147

Query: 179 VRSGISARQRRISTRNKNHVSNLMVLR-RKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
             SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++L+GYVKGVVS+ELL+
Sbjct: 148 TCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSDELLS 207


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  135 bits (340), Expect = 1e-29
 Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
 Frame = -2

Query: 536 HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE- 360
           +++GS+ +HQ +S K SLI AKK+S+       SNR +QSI AL EH++S+S+ ST +  
Sbjct: 34  NDYGSS-HHQTSSTK-SLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPL 91

Query: 359 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 180
           F GS D                 A+LLLQKSMLEKQW LSFER      P  + +K I V
Sbjct: 92  FQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPV 147

Query: 179 VRSGISARQRRISTRNKNHVSNLMVLR-RKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
             SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++L+GYVKGVVS+ELL+
Sbjct: 148 TCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSDELLS 207


>gb|KDO48040.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 301

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48039.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 391

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48038.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 330

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 417

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 419

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 443

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 499

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
           gi|641828897|gb|KDO48033.1| hypothetical protein
           CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 485

 Score =  132 bits (332), Expect = 1e-28
 Identities = 78/168 (46%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  +L++   KQ+ S++SPEL+QN+L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSILQQNGSKQLRSMISPELIQNRLKGYVKGVVSEELLT 207


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  131 bits (330), Expect = 2e-28
 Identities = 79/168 (47%), Positives = 107/168 (63%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  VL++   KQ+ S++SPEL+QN L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLT 207


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  130 bits (327), Expect = 4e-28
 Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = -2

Query: 548 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 381
           TEKL   ++HG T Y+  A+ K ++I AKK+S+ +GP FPS NR+S SI AL EH++++S
Sbjct: 27  TEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKALKEHVDTAS 83

Query: 380 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 201
             S    ++ + D                EA+LLLQKSMLEKQWNLSFER  +     ++
Sbjct: 84  ASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKK 140

Query: 200 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 27
           +NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN+L+GYVKG
Sbjct: 141 NNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKG 200

Query: 26  VVSEELL 6
           VVS+E+L
Sbjct: 201 VVSDEVL 207


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  130 bits (327), Expect = 4e-28
 Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = -2

Query: 548 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 381
           TEKL   ++HG T Y+  A+ K ++I AKK+S+ +GP FPS NR+S SI AL EH++++S
Sbjct: 27  TEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKALKEHVDTAS 83

Query: 380 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 201
             S    ++ + D                EA+LLLQKSMLEKQWNLSFER  +     ++
Sbjct: 84  ASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKK 140

Query: 200 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 27
           +NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN+L+GYVKG
Sbjct: 141 NNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKG 200

Query: 26  VVSEELL 6
           VVS+E+L
Sbjct: 201 VVSDEVL 207


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
           gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
           polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  130 bits (326), Expect = 5e-28
 Identities = 85/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = -2

Query: 548 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 381
           TEKL   ++HG T Y   A+ K +++ AKK+S+ +GP FPS NR+S SI AL EH++++S
Sbjct: 27  TEKLSSVNDHGIT-YCPTATTK-NVVVAKKSSN-YGPNFPSSNRNSHSIKALKEHVDTAS 83

Query: 380 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 201
             S    ++ + D                EA+LLLQKSMLEKQWNLSFER  +     ++
Sbjct: 84  ASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKK 140

Query: 200 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 27
           +NK I V  SG+SARQRR++ R KN   +  + +    K + S++SP+LLQN+L+GYVKG
Sbjct: 141 NNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVISPDLLQNRLKGYVKG 200

Query: 26  VVSEELL 6
           VVS+E+L
Sbjct: 201 VVSDEVL 207


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  129 bits (323), Expect = 1e-27
 Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
 Frame = -2

Query: 497 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 321
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 320 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 141
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 140 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 3
           ++ K    N  V ++   KQ+ S++SPEL+QN L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLT 207