BLASTX nr result
ID: Papaver31_contig00015835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00015835
(791 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210404.1| hypothetical protein PRUPE_ppa000784mg [Prun... 87 2e-14
ref|XP_008239276.1| PREDICTED: uncharacterized protein DDB_G0274... 86 2e-14
ref|XP_008239275.1| PREDICTED: nuclear pore complex protein Nup9... 86 2e-14
ref|XP_009360240.1| PREDICTED: nucleoporin nup189-like [Pyrus x ... 86 3e-14
ref|XP_008375446.1| PREDICTED: nuclear pore complex protein Nup9... 85 5e-14
ref|XP_012488655.1| PREDICTED: nuclear pore complex protein NUP9... 84 1e-13
gb|KJB39543.1| hypothetical protein B456_007G018500 [Gossypium r... 84 1e-13
ref|XP_009360310.1| PREDICTED: uncharacterized protein DDB_G0274... 83 2e-13
ref|XP_008356839.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 80 1e-12
ref|XP_009373695.1| PREDICTED: uncharacterized protein DDB_G0274... 80 2e-12
ref|XP_012474745.1| PREDICTED: nuclear pore complex protein NUP9... 80 2e-12
gb|KJB24100.1| hypothetical protein B456_004G127800 [Gossypium r... 80 2e-12
gb|KJB24099.1| hypothetical protein B456_004G127800 [Gossypium r... 80 2e-12
ref|XP_012474743.1| PREDICTED: nuclear pore complex protein NUP9... 80 2e-12
ref|XP_012474744.1| PREDICTED: nuclear pore complex protein NUP9... 80 2e-12
gb|KHG16584.1| Nuclear pore complex Nup98-Nup96 [Gossypium arbor... 80 2e-12
ref|XP_010319418.1| PREDICTED: nuclear pore complex protein Nup9... 79 4e-12
ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup9... 79 4e-12
ref|XP_011621883.1| PREDICTED: nuclear pore complex protein NUP9... 79 5e-12
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9... 79 5e-12
>ref|XP_007210404.1| hypothetical protein PRUPE_ppa000784mg [Prunus persica]
gi|462406139|gb|EMJ11603.1| hypothetical protein
PRUPE_ppa000784mg [Prunus persica]
Length = 1004
Score = 86.7 bits (213), Expect = 2e-14
Identities = 60/145 (41%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQLGDKG 465
AFG Q+RGGSR AY T D G K+ SI M VY KSHEELRW+DYQLGDKG
Sbjct: 342 AFGGQQRGGSRVAAYTETPEPDGGSGATAAKLESISAMSVYKDKSHEELRWEDYQLGDKG 401
Query: 466 GLIPAA---------------TPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGST 600
G PA T S+P F+ KT SFP T T
Sbjct: 402 GPAPAGGSAFGMSTAQPNSLNTASSFPQASTSPFNTATGPNLFT--PKTPSFPS-TGFGT 458
Query: 601 TSNLFGTGSF--LTSTAVFNQPSTP 669
+S F + +F TST FN S+P
Sbjct: 459 SSTPFSSSTFGLSTSTNTFNPSSSP 483
>ref|XP_008239276.1| PREDICTED: uncharacterized protein DDB_G0274915-like isoform X2
[Prunus mume]
Length = 1003
Score = 86.3 bits (212), Expect = 2e-14
Identities = 60/145 (41%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQLGDKG 465
AFG Q+RGGSR AY T D G K+ SI M VY KSHEELRW+DYQLGDKG
Sbjct: 341 AFGGQQRGGSRVAAYTETPEPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLGDKG 400
Query: 466 GLIPAA---------------TPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGST 600
G PA T S+P F+ KT SFP T T
Sbjct: 401 GPAPAGGSGFGMSTAQPNSLNTASSFPQASTSPFNTATGPNLFT--PKTPSFPS-TGFGT 457
Query: 601 TSNLFGTGSF--LTSTAVFNQPSTP 669
+S F + SF TST +F S+P
Sbjct: 458 SSTPFSSSSFGLSTSTNIFTPSSSP 482
>ref|XP_008239275.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Prunus mume]
Length = 1004
Score = 86.3 bits (212), Expect = 2e-14
Identities = 60/145 (41%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQLGDKG 465
AFG Q+RGGSR AY T D G K+ SI M VY KSHEELRW+DYQLGDKG
Sbjct: 342 AFGGQQRGGSRVAAYTETPEPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLGDKG 401
Query: 466 GLIPAA---------------TPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGST 600
G PA T S+P F+ KT SFP T T
Sbjct: 402 GPAPAGGSGFGMSTAQPNSLNTASSFPQASTSPFNTATGPNLFT--PKTPSFPS-TGFGT 458
Query: 601 TSNLFGTGSF--LTSTAVFNQPSTP 669
+S F + SF TST +F S+P
Sbjct: 459 SSTPFSSSSFGLSTSTNIFTPSSSP 483
>ref|XP_009360240.1| PREDICTED: nucleoporin nup189-like [Pyrus x bretschneideri]
gi|694360819|ref|XP_009360241.1| PREDICTED: nucleoporin
nup189-like [Pyrus x bretschneideri]
Length = 999
Score = 85.9 bits (211), Expect = 3e-14
Identities = 64/144 (44%), Positives = 75/144 (52%), Gaps = 17/144 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q+RGGSR VAYA T D GT K+ SI M Y +KSHEELRW+DYQLGDK
Sbjct: 340 AFGGQQRGGSRVVAYAATPEPDGGTGTSAAGKLESISAMPQYKEKSHEELRWEDYQLGDK 399
Query: 463 GGLIPA-------ATPQ-----SYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTS 606
GG PA T Q S P + + KT+SF T +TTS
Sbjct: 400 GGPAPAGGSGFGITTSQPNPLNSAPTFPQASSPFNATTSSNLFAPKTSSFTN-TGFTTTS 458
Query: 607 NLFGTGSF--LTSTAVF--NQPST 666
F + SF TST+ F +QPST
Sbjct: 459 TPFSSSSFGISTSTSPFAPSQPST 482
>ref|XP_008375446.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Malus
domestica]
Length = 990
Score = 85.1 bits (209), Expect = 5e-14
Identities = 62/144 (43%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q+RGGSR VAY T D GT K+ SI M Y +KSHEELRW+DYQLGDK
Sbjct: 335 AFGGQQRGGSRVVAYTATPEPDGGTGTSAAGKLESISAMPAYKEKSHEELRWEDYQLGDK 394
Query: 463 GGLIPA-------ATPQ-----SYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTS 606
GG PA T Q S P + + KT+SF G T S
Sbjct: 395 GGPAPAGGSGFGITTSQPSPLNSAPIFSQASSPFNATTSSNLFAPKTSSFT--NTGFTAS 452
Query: 607 NLFGTGSF--LTSTAVF--NQPST 666
F + SF TST+ F +QPST
Sbjct: 453 TPFSSSSFGIFTSTSPFTPSQPST 476
>ref|XP_012488655.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X6
[Gossypium raimondii]
Length = 1119
Score = 83.6 bits (205), Expect = 1e-13
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 286 AFGQQ----KRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQ 450
+FGQ +RGGSR Y+ T D GT K+ SI M VY KSHEELRW+DYQ
Sbjct: 439 SFGQSPFGGQRGGSRVAPYSSTTEADGGSGTQPAGKLESISAMPVYKDKSHEELRWEDYQ 498
Query: 451 LGDKGGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTSNLFGTGSF 630
LGDKGG PA+ P + + ++G T++ ST+S+LFG S
Sbjct: 499 LGDKGGPNPASQPSAGIGFGVSTSPSNPFSTSSTFGFTTSATTSNPFQSTSSSLFGQTSS 558
Query: 631 LTSTAVFNQPSTP 669
+T T++F+ STP
Sbjct: 559 MT-TSIFSSSSTP 570
>gb|KJB39543.1| hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 1111
Score = 83.6 bits (205), Expect = 1e-13
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 286 AFGQQ----KRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQ 450
+FGQ +RGGSR Y+ T D GT K+ SI M VY KSHEELRW+DYQ
Sbjct: 439 SFGQSPFGGQRGGSRVAPYSSTTEADGGSGTQPAGKLESISAMPVYKDKSHEELRWEDYQ 498
Query: 451 LGDKGGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTSNLFGTGSF 630
LGDKGG PA+ P + + ++G T++ ST+S+LFG S
Sbjct: 499 LGDKGGPNPASQPSAGIGFGVSTSPSNPFSTSSTFGFTTSATTSNPFQSTSSSLFGQTSS 558
Query: 631 LTSTAVFNQPSTP 669
+T T++F+ STP
Sbjct: 559 MT-TSIFSSSSTP 570
>ref|XP_009360310.1| PREDICTED: uncharacterized protein DDB_G0274915-like [Pyrus x
bretschneideri]
Length = 562
Score = 83.2 bits (204), Expect = 2e-13
Identities = 64/147 (43%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q+R GSR VAYA T D GT K+ SI M Y +KSHEELRW+DYQLGDK
Sbjct: 365 AFGGQQREGSRVVAYAATPEPDCGTGTSAAGKLESISAMPAYKEKSHEELRWEDYQLGDK 424
Query: 463 GGLIPA-------ATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTP--------GS 597
GG PA T Q P S+ TTS F P G
Sbjct: 425 GGPAPAGGRGFGITTSQPNPL-----NSAHTFPQASSHFNATTSSNLFAPKTSSFTNTGF 479
Query: 598 TTSNLFGTGSF--LTSTAVF--NQPST 666
TTS F + SF TST+ F +QPST
Sbjct: 480 TTSTPFSSSSFGISTSTSPFTPSQPST 506
>ref|XP_008356839.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
DDB_G0274915-like [Malus domestica]
Length = 416
Score = 80.5 bits (197), Expect = 1e-12
Identities = 61/144 (42%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG +RGGSR VAYA T D GT K+ SI M Y +KSHEELRW+DYQLGDK
Sbjct: 227 AFGGXQRGGSRVVAYAATPEPDGGTGTSAAGKLESISAMPAYKEKSHEELRWEDYQLGDK 286
Query: 463 GGLIPA-------ATPQSYPF-----WXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTS 606
GG PA T Q P + + KT+SF T +TTS
Sbjct: 287 GGPAPAGGSGFGITTSQPNPLNPAPTFPQASSPFNATTSSNLFAPKTSSFTN-TGFTTTS 345
Query: 607 NLFGTGSF--LTSTAVF--NQPST 666
+ SF TST+ F +QPST
Sbjct: 346 TPVSSASFGISTSTSPFTPSQPST 369
>ref|XP_009373695.1| PREDICTED: uncharacterized protein DDB_G0274915-like [Pyrus x
bretschneideri]
Length = 1017
Score = 80.1 bits (196), Expect = 2e-12
Identities = 60/144 (41%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q+RGGSR AYA T D GT K+ SI M Y +KSHEELRW+DYQLGDK
Sbjct: 347 AFGGQQRGGSRVAAYAATPEPDGGTGTSAAGKLESISAMPAYKEKSHEELRWEDYQLGDK 406
Query: 463 GGLIPA-------ATPQSYPF-----WXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTS 606
GG PA T Q P + + KT SF T +T+S
Sbjct: 407 GGPAPAGASGFGITTSQPNPLNPAQAFPQASSPFNATTSSNLFAPKTPSFTN-TGFATSS 465
Query: 607 NLFGTGSF--LTSTAVF--NQPST 666
F + F TST+ F +QPST
Sbjct: 466 TPFSSSGFGISTSTSPFTPSQPST 489
>ref|XP_012474745.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
[Gossypium raimondii]
Length = 981
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 318 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 376
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 377 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 436
Query: 634 TSTAVFN 654
TST N
Sbjct: 437 TSTTTSN 443
>gb|KJB24100.1| hypothetical protein B456_004G127800 [Gossypium raimondii]
Length = 576
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 313 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 371
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 372 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 431
Query: 634 TSTAVFN 654
TST N
Sbjct: 432 TSTTTSN 438
>gb|KJB24099.1| hypothetical protein B456_004G127800 [Gossypium raimondii]
Length = 776
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 313 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 371
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 372 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 431
Query: 634 TSTAVFN 654
TST N
Sbjct: 432 TSTTTSN 438
>ref|XP_012474743.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X1
[Gossypium raimondii] gi|763756766|gb|KJB24097.1|
hypothetical protein B456_004G127800 [Gossypium
raimondii]
Length = 995
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 318 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 376
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 377 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 436
Query: 634 TSTAVFN 654
TST N
Sbjct: 437 TSTTTSN 443
>ref|XP_012474744.1| PREDICTED: nuclear pore complex protein NUP98A-like isoform X2
[Gossypium raimondii] gi|763756765|gb|KJB24096.1|
hypothetical protein B456_004G127800 [Gossypium
raimondii] gi|763756767|gb|KJB24098.1| hypothetical
protein B456_004G127800 [Gossypium raimondii]
Length = 990
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 313 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 371
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 372 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 431
Query: 634 TSTAVFN 654
TST N
Sbjct: 432 TSTTTSN 438
>gb|KHG16584.1| Nuclear pore complex Nup98-Nup96 [Gossypium arboreum]
Length = 1046
Score = 79.7 bits (195), Expect = 2e-12
Identities = 55/127 (43%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALTELEDSALGTGKV-KVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T DS GT K+ SI MHVY KSHEELRW+DYQLGDK
Sbjct: 372 AFGGQ-RGGSRVAPYTPTTDADSGSGTQPAAKLESISAMHVYKDKSHEELRWEDYQLGDK 430
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTT---SFPKFTPGSTTSNLFGTGSFL 633
GG PAA P + + GQ + S P S F + SF
Sbjct: 431 GGPQPAAQPSGGIGFGVSAAPASPFGSSSTIGQTSANPFSGTSANPFSIKPPSFNSASFT 490
Query: 634 TSTAVFN 654
TST N
Sbjct: 491 TSTTTSN 497
>ref|XP_010319418.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X2
[Solanum lycopersicum]
Length = 993
Score = 79.0 bits (193), Expect = 4e-12
Identities = 58/165 (35%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Frame = +1
Query: 286 AFGQQ----KRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQL 453
+FGQ +RGG+R AY T D++ GT K+ SI M VY +KSHEELRW+DYQL
Sbjct: 284 SFGQSAVGGQRGGTRVAAYQATPDADNSSGTQPAKLESISAMPVYKEKSHEELRWEDYQL 343
Query: 454 GDKGGLIPA--------------ATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSF----- 576
GDKGG PA A+ + PF + K ++F
Sbjct: 344 GDKGGPAPAGQSTGGINFGSSAFASSSTSPFGQSSANPFTSSTSSNPFAPKPSTFSTPNF 403
Query: 577 -----PKFT----PGSTTSNLFG-----TGSFLTSTAVFNQPSTP 669
P F P S TSN FG + S ST+ F Q ++P
Sbjct: 404 GVPTTPAFNTSAFPSSNTSNPFGSTSSTSPSLFGSTSAFGQSTSP 448
>ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X1
[Solanum lycopersicum] gi|723690405|ref|XP_010319417.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96
isoform X1 [Solanum lycopersicum]
Length = 994
Score = 79.0 bits (193), Expect = 4e-12
Identities = 58/165 (35%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Frame = +1
Query: 286 AFGQQ----KRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQL 453
+FGQ +RGG+R AY T D++ GT K+ SI M VY +KSHEELRW+DYQL
Sbjct: 284 SFGQSAVGGQRGGTRVAAYQATPDADNSSGTQPAKLESISAMPVYKEKSHEELRWEDYQL 343
Query: 454 GDKGGLIPA--------------ATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSF----- 576
GDKGG PA A+ + PF + K ++F
Sbjct: 344 GDKGGPAPAGQSTGGINFGSSAFASSSTSPFGQSSANPFTSSTSSNPFAPKPSTFSTPNF 403
Query: 577 -----PKFT----PGSTTSNLFG-----TGSFLTSTAVFNQPSTP 669
P F P S TSN FG + S ST+ F Q ++P
Sbjct: 404 GVPTTPAFNTSAFPSSNTSNPFGSTSSTSPSLFGSTSAFGQSTSP 448
>ref|XP_011621883.1| PREDICTED: nuclear pore complex protein NUP98A [Amborella
trichopoda]
Length = 1074
Score = 78.6 bits (192), Expect = 5e-12
Identities = 53/128 (41%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = +1
Query: 286 AFGQQKRGGSRAVAYALT-ELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQLGDK 462
AFG Q RGGSR Y T E++ G K+ SI M VY KSHEELRW+DYQLGDK
Sbjct: 318 AFGGQ-RGGSRVAPYVPTPEVDGGVAGAAPGKLESISAMPVYKDKSHEELRWEDYQLGDK 376
Query: 463 GGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTSNLFGTGSFLTST 642
GG PA P F F G + P ST+SN+F + T
Sbjct: 377 GGPSPAGQPAGGLF------GQPSQPSPFGGGAFGQTAPNPFSSSTSSNIFAPKTHSFGT 430
Query: 643 AVFNQPST 666
F PST
Sbjct: 431 TGFGAPST 438
>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
[Solanum tuberosum]
Length = 993
Score = 78.6 bits (192), Expect = 5e-12
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +1
Query: 286 AFGQQ----KRGGSRAVAYALTELEDSALGTGKVKVHSIPFMHVYAQKSHEELRWDDYQL 453
+FGQ +RGG+R AY T D+ GT K+ SI M VY +KSHEELRW+DYQL
Sbjct: 285 SFGQSAVGGQRGGTRVAAYQATPDADNPSGTQPAKLESISAMPVYKEKSHEELRWEDYQL 344
Query: 454 GDKGGLIPAATPQSYPFWXXXXXXXXXXXXXFSYGQKTTSFPKFTPGSTTSNLFGTGSFL 633
GDKGG PA S +GQ + + FT +T+SN F
Sbjct: 345 GDKGGPAPAGQSTS---GMNFGSSAFASSTTSPFGQSSAN--PFT-STTSSNPFAPKPST 398
Query: 634 TSTAVFNQPSTP 669
ST+ F P+TP
Sbjct: 399 FSTSGFGVPTTP 410