BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00009775
         (3010 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1488   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1441   0.0  
emb|CBI16226.3| unnamed protein product [Vitis vinifera]             1437   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...  1376   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...  1375   0.0  
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s...  1360   0.0  
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...  1359   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1358   0.0  
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1357   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1356   0.0  
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...  1356   0.0  
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...  1353   0.0  
ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1347   0.0  
ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III s...  1345   0.0  
ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III s...  1345   0.0  
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...  1343   0.0  
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...  1338   0.0  
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...  1338   0.0  
ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III s...  1335   0.0  
ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III s...  1331   0.0  

>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1488 bits (3851), Expect = 0.0
 Identities = 733/985 (74%), Positives = 831/985 (84%), Gaps = 13/985 (1%)
 Frame = -3

Query: 2951 TDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALL 2772
            T   + FTK+PY+EDVGPRKIKSI+FSM SG EI KA+E+QV+ S +YD +RKP  + LL
Sbjct: 4    TQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNRKPIDDGLL 63

Query: 2771 DSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARIL 2592
            DSRMGPA+K   C TC GS TDCPGH+GY +L LPVFNVGYF+ IL++LKC+CKSCARIL
Sbjct: 64   DSRMGPASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSCARIL 123

Query: 2591 LSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKK-- 2439
            L E  R  YLKKMR+ K +ALQK  L K I+ KC       K  KC+RCGYING VKK  
Sbjct: 124  LEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFVKKGA 183

Query: 2438 ----SGTVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRIL 2271
                +G+ +GIVHDRSK+ D   EEC  AIS  K+S+ +SF VV+VLNPVR+L LF+R++
Sbjct: 184  SISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESK-ASFRVVHVLNPVRILALFKRMV 242

Query: 2270 DQDCDLLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLR 2091
            D+DC+LLYL DRPEKLIITDI VPPIAIRPS F+D G  SNEDDITSKL+ II+AN  LR
Sbjct: 243  DEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANAPLR 302

Query: 2090 QDLHCTSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRG 1911
            QDL   +P SKCL+ W+ LQ+EVAQYINSDVRG+P SMQ SKPLRGF+QRLKGKQGRFRG
Sbjct: 303  QDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFVQRLKGKQGRFRG 362

Query: 1910 NLSGKRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQK 1731
            NLSGKRVEYT RTVISPDPNLKITEV IPIL+AQ+LTYPE VS +NIEKLR+CV NG QK
Sbjct: 363  NLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEKLRQCVRNGSQK 422

Query: 1730 YPGANFVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMS 1551
            YPGANF+R   GS+ NLR+  RK  AD LKYG  VERHLEDGD+VLFNRQPSLHRMSIMS
Sbjct: 423  YPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMSIMS 482

Query: 1550 HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 1371
            HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG
Sbjct: 483  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 542

Query: 1370 EILVASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGK 1191
             ILVASTQDFLTS+FLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPALIKP+ELWTGK
Sbjct: 543  AILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGK 602

Query: 1190 QLFNVLIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNG 1011
            QLF+VL+RPHA MRV++NLTV EK+ +K +ET+CPNDGFVYFRNSELICGQLGKATLGNG
Sbjct: 603  QLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELICGQLGKATLGNG 662

Query: 1010 NKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXX 831
            NKDGLFSVLLRDY+AHAAASCMNR+AKLSARWIGNHGFSIGI DVQPG+ L         
Sbjct: 663  NKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKETIE 722

Query: 830  XXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPL 651
                   +LI  Y  G LEL+PGCDAAQTLEA+IT  LN IRE+ A VCM+ LHWRNSPL
Sbjct: 723  DGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRNSPL 782

Query: 650  IMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSF 471
            IMSQCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPR S TP AKGFV NSF
Sbjct: 783  IMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVANSF 842

Query: 470  YTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVV 291
            YTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDL+++YD TVR+ASGGVV
Sbjct: 843  YTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASGGVV 902

Query: 290  QFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHD 111
            QFLYGDDG+DP+ MEGK G PLNL+R+Y+K KATCP+  + SL P+EI++++  R+S++D
Sbjct: 903  QFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRISRYD 962

Query: 110  MTPEGGCSDAFKKSLLDEEGFMQNK 36
            MTP+GGCS AFKK L+D   F+QN+
Sbjct: 963  MTPDGGCSSAFKKLLVD---FIQNR 984


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
            vinifera]
          Length = 1383

 Score = 1441 bits (3730), Expect = 0.0
 Identities = 710/975 (72%), Positives = 825/975 (84%), Gaps = 9/975 (0%)
 Frame = -3

Query: 2939 IQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 2760
            IQFTK+PY+EDVGPRKI+SI+F++ S +EI KA+E+QV+   +YD +RKP +N LLD RM
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 2759 GPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSER 2580
            GPANK  TCATC G+  DCPGH GY  L LPV+NVGY + I+++LKC+CKSC+R+LL E+
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 2579 DRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMG 2421
                YLKKMR+ K+EAL+K  L K I+ KC       K  KCSRCGY+NG+VKK+ +V+G
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 2420 IVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLS 2241
            I+HDRSK+ DG  EEC  AIS TK+S+ +SF+VV +LNPV+VL LF+R++D+DCDLL L+
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESK-ASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2240 DRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTS 2061
            +RPEKL++T+I VPPIAIRPS F+DGG  SNE+D+T +L  IIQAN SL Q+L  T  TS
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2060 KCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYT 1881
            KCL  W+ LQ+EVAQYINSDVRGVPL+MQ+++PL GF+QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 363

Query: 1880 ARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLA 1701
             RTVISPDPNLKITEV IPIL+A++L+YPE VS +NIEKLR+C+ NGP KYPGA  +R  
Sbjct: 364  GRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYP 423

Query: 1700 SGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1521
             GS+++L +  RK +AD LKYG  VERHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWRT
Sbjct: 424  DGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 483

Query: 1520 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1341
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 484  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 543

Query: 1340 LTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPH 1161
            LTSSFLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPA+IKPVELWTGKQLFNVL+RPH
Sbjct: 544  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPH 603

Query: 1160 AQMRVFVNLTVFEKSYIK--GRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSV 987
            A +RV++NLTV EK+Y K  G+ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGLFSV
Sbjct: 604  ANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSV 663

Query: 986  LLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXK 807
            LLRDY+AHAAA+CMNRLAKLSARWIGNHGFSIGI DVQPG  L+               +
Sbjct: 664  LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHE 723

Query: 806  LIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSK 627
            LI+ Y  GKL+LQPGC+AAQTLEAEITG+LN IRE  A VCME LHWRNSPLIMSQCGSK
Sbjct: 724  LIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSK 783

Query: 626  GSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATE 447
            GSP NI+QMIACVGQQSVGGRRA +GFIDR+LPHFPR S TPDAKGFV +SFYTGLTATE
Sbjct: 784  GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843

Query: 446  FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDG 267
            FFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVR+A+G +VQFLYGDDG
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903

Query: 266  MDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCS 87
            MDP+RMEGKDG PLN +RL++KVKATCPA  + SLS  +I E  V RL +H+ + E GCS
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCS 961

Query: 86   DAFKKSLLDEEGFMQ 42
            DAFK +L    GF++
Sbjct: 962  DAFKTNL---SGFLE 973


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score = 1437 bits (3719), Expect = 0.0
 Identities = 708/975 (72%), Positives = 824/975 (84%), Gaps = 9/975 (0%)
 Frame = -3

Query: 2939 IQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 2760
            IQFTK+PY+EDVGPRKI+SI+F++ S +EI KA+E+QV+   +YD +RKP +N LLD RM
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 2759 GPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSER 2580
            GPANK  TCATC G+  DCPGH GY  L LPV+NVGY + I+++LKC+CKSC+R+LL E+
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 2579 DRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMG 2421
                YLKKMR+ K+EAL+K  L K I+ KC       K  KCSRCGY+NG+VKK+ +V+G
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLG 184

Query: 2420 IVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLS 2241
            I+HDRSK+ DG  EEC  AIS TK+S+ +SF+VV +LNPV+VL LF+R++D+DCDLL L+
Sbjct: 185  IIHDRSKIADGSLEECSSAISHTKESK-ASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 2240 DRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTS 2061
            +RPEKL++T+I VPPIAIRPS F+DGG  SNE+D+T +L  IIQAN SL Q+L  T  TS
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 2060 KCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYT 1881
            KCL  W+ LQ+EVAQYINSDVRGVPL+MQ+++PL GF+QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 363

Query: 1880 ARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLA 1701
             RTVISPDPNLKITEV IPIL+A++L+YPE VS +NIEKLR+C+ NGP KYPGA  +R  
Sbjct: 364  GRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYP 423

Query: 1700 SGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1521
             GS+++L +  RK +AD LKYG  VERHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWRT
Sbjct: 424  DGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 483

Query: 1520 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1341
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 484  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 543

Query: 1340 LTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPH 1161
            LTSSFLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPA+IK +ELWTGKQLFNVL+RPH
Sbjct: 544  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRPH 603

Query: 1160 AQMRVFVNLTVFEKSYIK--GRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSV 987
            A +RV++NLTV EK+Y K  G+ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGLFSV
Sbjct: 604  ANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSV 663

Query: 986  LLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXK 807
            LLRDY+AHAAA+CMNRLAKLSARWIGNHGFSIGI DVQPG  L+               +
Sbjct: 664  LLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHE 723

Query: 806  LIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSK 627
            LI+ Y  GKL+LQPGC+AAQTLEAEITG+LN IRE  A VCME LHWRNSPLIMSQCGSK
Sbjct: 724  LIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSK 783

Query: 626  GSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATE 447
            GSP NI+QMIACVGQQSVGGRRA +GFIDR+LPHFPR S TPDAKGFV +SFYTGLTATE
Sbjct: 784  GSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTATE 843

Query: 446  FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDG 267
            FFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVR+A+G +VQFLYGDDG
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDDG 903

Query: 266  MDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCS 87
            MDP+RMEGKDG PLN +RL++KVKATCPA  + SLS  +I E  V RL +H+ + E GCS
Sbjct: 904  MDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQI-EETVKRLKEHNTSAE-GCS 961

Query: 86   DAFKKSLLDEEGFMQ 42
            DAFK +L    GF++
Sbjct: 962  DAFKTNL---SGFLE 973


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
            guineensis]
          Length = 1369

 Score = 1376 bits (3562), Expect = 0.0
 Identities = 684/961 (71%), Positives = 779/961 (81%)
 Frame = -3

Query: 2942 EIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSR 2763
            +++ TK+PY+EDVGPRKIKSI+FS  SG EI K +E+QV+N+  YD + KP +N LLD R
Sbjct: 4    KLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLNLKPIENGLLDPR 63

Query: 2762 MGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 2583
            MG  N+   CATCHG+ TDCPGH+GY  L LPVFNVGYFN+ILN+LKC+CK C RILL E
Sbjct: 64   MGAPNRQTECATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRILLDE 123

Query: 2582 RDRISYLKKMRNPKLEALQKTGLAKAILNKCKPKKCSRCGYINGVVKKSGTVMGIVHDRS 2403
              R SYLKKMRNPK +  QK  L K + +KCKP +C RCGY NGVVKK+ + +  + D S
Sbjct: 124  TLRKSYLKKMRNPKADIFQKNALMKMVRDKCKPSRCLRCGYANGVVKKARSGLYFIQDFS 183

Query: 2402 KLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLSDRPEKL 2223
            K  D   EE   A+S TKD   +SF V +VL+ V VL LFR++LD+DC+LL L DRPEKL
Sbjct: 184  KTADPSVEEFRSALSHTKDK--TSFQVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPEKL 241

Query: 2222 IITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTSKCLVAW 2043
            I+T I VPP++IRPS  VD G++SNED+ITS L  II  N+ LR+DL   +P  KCL  W
Sbjct: 242  IVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILREDLEGAAPPFKCLDCW 301

Query: 2042 ELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTARTVIS 1863
              LQ++V +YINS+   +P S       RG +QRLKGKQGRFRGNLSGKRVE+T RTVIS
Sbjct: 302  THLQIQVVEYINSEAPCIPDSKH-----RGLVQRLKGKQGRFRGNLSGKRVEFTGRTVIS 356

Query: 1862 PDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLASGSLQN 1683
            PDPNLKITEV IPIL+A+VLTYPE VS YNIEKLR+ V NGP KYPGANFV    GS  +
Sbjct: 357  PDPNLKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSKYPGANFVLRPDGSKVH 416

Query: 1682 LRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLRFNES 1503
            LRY  ++  A+ LKYG  VERHLEDGD+VLFNRQPSLHRMSIM HRA+IMPWRTLRFNES
Sbjct: 417  LRYVDKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNES 476

Query: 1502 VCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1323
            VCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 477  VCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 536

Query: 1322 ITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMRVF 1143
            ITR+DTFYDRA+FSLMCSYMGDAMD IDLPTPA+IKP+ELWTGKQLFNVLIRP+A  RVF
Sbjct: 537  ITRKDTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGKQLFNVLIRPNANTRVF 596

Query: 1142 VNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYDAH 963
            +NL V EK Y K  ET+CPNDG VYFRNSELICGQLGKATLGNGNKDGLF+VLLRDY+ H
Sbjct: 597  LNLIVKEKIYSKS-ETMCPNDGCVYFRNSELICGQLGKATLGNGNKDGLFAVLLRDYNPH 655

Query: 962  AAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYKTG 783
            AAASCMNRLAKLSARWIGNHGFSIGI DVQPG++L+                 I  Y  G
Sbjct: 656  AAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHGHISSYSKG 715

Query: 782  KLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNITQ 603
            +L LQPGC+AAQTLE +ITG+LN IR  A  VCM  LHWRNSPLIMSQCGSKGSP NI+Q
Sbjct: 716  ELILQPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGSPINISQ 775

Query: 602  MIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTMGG 423
            M+ACVGQQSVGGRRA NGFIDR+LPHFP NS TP AKGFV NSFYTGLT TEFFFHTMGG
Sbjct: 776  MVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTEFFFHTMGG 835

Query: 422  REGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRMEG 243
            REGLVDTAVKTA+TGYMSRRL+K LEDLSI+YD TVR+ASG +VQF+YGDDGMDP++MEG
Sbjct: 836  REGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDGMDPAKMEG 895

Query: 242  KDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKSLL 63
            KDG PLNLD+L+MK+ ATCP R   +LSPAEIL ++  RLSK+DMTPEGGCS +FKK L 
Sbjct: 896  KDGIPLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYDMTPEGGCSASFKKMLS 955

Query: 62   D 60
            D
Sbjct: 956  D 956


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score = 1375 bits (3559), Expect = 0.0
 Identities = 689/984 (70%), Positives = 796/984 (80%), Gaps = 17/984 (1%)
 Frame = -3

Query: 2936 QFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMG 2757
            +FTK+PY+EDVGPRKIKSIQFSM+S +EI KA+E+QV+ + +YD   +P +  LLD RMG
Sbjct: 4    KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63

Query: 2756 PANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERD 2577
            PANK   CATCHG+  DCPGHYGY  L LPV+NVGY + IL++LKC+CKSC+RI+L E+ 
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 2576 RISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSGTVMGIV 2415
               YLK+MR+PK++AL+K  + K+I+ KC      K  KC RCGY+NG VKK+  ++GI+
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGII 183

Query: 2414 HDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLSDR 2235
            HDRSK+ D   EE   AIS TK+S+ S     YVLNPV+VL LF+R+ D DC+LLYLSDR
Sbjct: 184  HDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDR 243

Query: 2234 PEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTSKC 2055
            PEKLIIT+I VPPI IRPS  +DG + SNE+DIT +L  IIQAN SLRQ+L  T+   KC
Sbjct: 244  PEKLIITNIAVPPIPIRPSVIMDGSQ-SNENDITERLKRIIQANASLRQELVETNAAFKC 302

Query: 2054 LVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTAR 1875
            L  WE+LQVEVAQYINSDVRGVP SMQ SKPL GF+QR+KGK GRFRGNLSGKRVEYT R
Sbjct: 303  LGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGR 362

Query: 1874 TVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLASG 1695
            TVISPDPNLKITEV IPI +A++LTYPE VS +NIEKLR+CV NGP KYPGA  VR   G
Sbjct: 363  TVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRYPDG 422

Query: 1694 SLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLR 1515
            S + L    RK  AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIM HRA+IMPWRTLR
Sbjct: 423  SARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLR 482

Query: 1514 FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 1335
            FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 483  FNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 542

Query: 1334 SSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQ 1155
            SSFLITR+D FYDRA+FSL+CSYMGD MD IDLPTPAL+KP+ELWTGKQLF+VL+RPHA 
Sbjct: 543  SSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRPHAS 602

Query: 1154 MRVFVNLTVFEKSYIK-----------GRETLCPNDGFVYFRNSELICGQLGKATLGNGN 1008
            +RV++NL V E++Y K             ET+CP+DGFVY RNSELICGQLGKATLGNGN
Sbjct: 603  VRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLGNGN 662

Query: 1007 KDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXX 828
            KDGL+SVLLRDY+AHAAA+CMNRLAKLSARWIGNHGFSIGI DVQPGK L+         
Sbjct: 663  KDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALTISG 722

Query: 827  XXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLI 648
                  + I+ +  GKL+ +PG DAAQTLEA +T ILNNIR+K   VCM+ LHWRNSPLI
Sbjct: 723  DYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNSPLI 782

Query: 647  MSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFY 468
            MSQCGSKGS  NI+QMIACVGQQSVGGRRA NGFIDRSLPHF R S TP AKGFV NSFY
Sbjct: 783  MSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVANSFY 842

Query: 467  TGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQ 288
            +GLTATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSIHYD+TVR+ASG +VQ
Sbjct: 843  SGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGCIVQ 902

Query: 287  FLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDM 108
            F+YGDDGMDP+ MEGK G PLN DRL MKVKATCP      L    I++++  +L+KHD 
Sbjct: 903  FIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAKHD- 961

Query: 107  TPEGGCSDAFKKSLLDEEGFMQNK 36
             P G CS+AFKKSL   +GF++++
Sbjct: 962  -PAGVCSEAFKKSL---KGFLKSQ 981


>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
            acuminata subsp. malaccensis]
          Length = 1372

 Score = 1360 bits (3520), Expect = 0.0
 Identities = 675/963 (70%), Positives = 780/963 (80%)
 Frame = -3

Query: 2948 DAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLD 2769
            + +++ TK+PY+EDVGP++IKSI+FS  SG EI K +E+QV+N+  Y  D +P +N LLD
Sbjct: 5    EEKLRCTKEPYIEDVGPQRIKSIRFSTFSGEEIKKLAEVQVWNNRIYGIDLRPVENGLLD 64

Query: 2768 SRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILL 2589
             +MG ANK   CATCHG+ T+CPGH+GY  L LPVFNVG+FN+ILNVLKC+CK+CARILL
Sbjct: 65   PKMGAANKAGVCATCHGNFTECPGHFGYLKLTLPVFNVGFFNSILNVLKCICKACARILL 124

Query: 2588 SERDRISYLKKMRNPKLEALQKTGLAKAILNKCKPKKCSRCGYINGVVKKSGTVMGIVHD 2409
             E DR  +LKKMRNPK +   K  L K I +KCK   C  CG  NGVVKK+ +   I HD
Sbjct: 125  LENDRRIFLKKMRNPKADIFMKNALMKKIRDKCKISICPWCGSRNGVVKKARSSFAIAHD 184

Query: 2408 RSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLSDRPE 2229
             S+ +D   E    A+S  K    SSF +V+VL+PV VL LF+R++D+DC+LL L DRP+
Sbjct: 185  FSRSVDESIEVVRAALSHIKAK--SSFQIVHVLSPVTVLSLFKRMVDEDCELLNLYDRPD 242

Query: 2228 KLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTSKCLV 2049
            KLI+T I VPP+A+RPS FVD GK+SNED IT+ L  II  N+ LR+DL   +P  KCL 
Sbjct: 243  KLIVTTIAVPPVAVRPSVFVDFGKSSNEDSITTILKNIINTNSILREDLEGAAPPFKCLD 302

Query: 2048 AWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTARTV 1869
             W  LQ++V +YINS+   VP S       RG IQRLKGKQGRFRGNLSGKRVE+T RTV
Sbjct: 303  CWAHLQIQVVEYINSEAPSVPDSKH-----RGLIQRLKGKQGRFRGNLSGKRVEFTGRTV 357

Query: 1868 ISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLASGSL 1689
            ISPDPNLKITEV IP+L+A+ LTYPE VS YNIEKLR+ + NGP KYPGANF+ L  G+ 
Sbjct: 358  ISPDPNLKITEVAIPVLMAKKLTYPERVSAYNIEKLRQRICNGPDKYPGANFILLGDGTK 417

Query: 1688 QNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTLRFN 1509
            Q+LRY  +K  A  LKYG  VERHLEDGDVVLFNRQPSLHRMSIM HRA+IMPWRTLRFN
Sbjct: 418  QHLRYVDKKTAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFN 477

Query: 1508 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 1329
            ESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS
Sbjct: 478  ESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 537

Query: 1328 FLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHAQMR 1149
            FLITR+DTFYDRA+FSLMCSYMGD+MD IDLP+PA+IKP+ELWTGKQLF+VLIRP+A+ +
Sbjct: 538  FLITRKDTFYDRAAFSLMCSYMGDSMDPIDLPSPAIIKPIELWTGKQLFSVLIRPNARTK 597

Query: 1148 VFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFSVLLRDYD 969
            VF+NL V EK Y K  ET+CP+DG+VYFRNSELICGQLGK TLGNGNKDGLFSVLLRDY+
Sbjct: 598  VFLNLMVKEKIYTKS-ETMCPSDGYVYFRNSELICGQLGKVTLGNGNKDGLFSVLLRDYN 656

Query: 968  AHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXXKLIEHYK 789
            +HAAASCMNRLAKLSARWIGNHGFSIGI DVQPG+ L+               +LI  Y 
Sbjct: 657  SHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKIDEGYRECHELISLYG 716

Query: 788  TGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGSKGSPSNI 609
             GKL LQPGC+AAQTLE +ITG+LN IR  A  VCM  LHWRNSPLIMSQCGSKGSP NI
Sbjct: 717  KGKLTLQPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSPLIMSQCGSKGSPINI 776

Query: 608  TQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTATEFFFHTM 429
            +QM++CVGQQSVGGRRA NGFIDR+LPHFP NS TP AKGFV NSFYTGLTATEFFFHTM
Sbjct: 777  SQMVSCVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTM 836

Query: 428  GGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDDGMDPSRM 249
            GGREGLVDTAVKTA+TGYMSRRL+K LEDLSI+YD TVR+ASGG+VQFLYGDDGMDP++M
Sbjct: 837  GGREGLVDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMDPAKM 896

Query: 248  EGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGCSDAFKKS 69
            EGKDG PLN+D+L+MKV ATCP R H  LSP E L ++  RL+K+DM+PEGGCS AFKK 
Sbjct: 897  EGKDGIPLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFKKL 956

Query: 68   LLD 60
            L D
Sbjct: 957  LSD 959


>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
            indicum]
          Length = 1405

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 670/966 (69%), Positives = 786/966 (81%), Gaps = 11/966 (1%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            +  A +QF+KQPY+EDVGPR+I+SIQFS  SGTE++K +E++V    +YD  +KP  N L
Sbjct: 3    KVQATLQFSKQPYIEDVGPRRIESIQFSTFSGTEVLKTAEVEVSRGVYYDSTKKPIDNGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD  MGP NK   C TC+G+  +CPGH GY  L LPV+NVGY + I+++LKC+CK CAR+
Sbjct: 63   LDPHMGPPNKNGFCKTCYGNFRECPGHCGYLALALPVYNVGYLSTIIDILKCICKKCARV 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 2436
            LL E++R  +LKKMRNPKLE L+K  + K ++ +C       +  KCSRCGYING+VKK 
Sbjct: 123  LLEEKERQEFLKKMRNPKLEPLKKNEILKKVVKRCNAMAGSKRAVKCSRCGYINGMVKKG 182

Query: 2435 GTVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCD 2256
               + I HDR+K++D   EEC+ A+S TKDS+  +     +++P  V  L R +LD+DC+
Sbjct: 183  P--LKIQHDRAKIVDSDLEECQSAVSHTKDSK-GNVNFSSIIDPKLVYQLLRNMLDEDCE 239

Query: 2255 LLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHC 2076
            LLYL+DRPEKL++T+ILVPPIAIRPS FVDGG  SNE+DIT +L  IIQAN SLRQ+L  
Sbjct: 240  LLYLNDRPEKLMVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQELLE 299

Query: 2075 TSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 1896
            T+  +K L +W+ LQ+EVAQYINSDVRG+P  M ++KPL GF+QRLKGKQGRFRGNLSGK
Sbjct: 300  TNLYNKNLTSWDDLQMEVAQYINSDVRGLPFHMTTAKPLSGFVQRLKGKQGRFRGNLSGK 359

Query: 1895 RVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGAN 1716
            RVEYT RTVISPDPNLKI+EV IPIL+A++LTYPE VS +NIEKLR+CV NGP KYPGA 
Sbjct: 360  RVEYTGRTVISPDPNLKISEVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 419

Query: 1715 FVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1536
            F+R   G+  +L +  RK +AD LKYG  V+RHLEDGD+VLFNRQPSLHRMSIMSHRA+I
Sbjct: 420  FIRQPDGTEISLMFSSRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 479

Query: 1535 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1356
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA
Sbjct: 480  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 539

Query: 1355 STQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNV 1176
            STQDFLTSSFLITR+DTFYDRASFSLMCSYMGDAMD IDLPTPAL+KPVELWTGKQLF+V
Sbjct: 540  STQDFLTSSFLITRKDTFYDRASFSLMCSYMGDAMDPIDLPTPALVKPVELWTGKQLFSV 599

Query: 1175 LIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGL 996
            L+RPHA+MRV++NLTV EKSY K RET+CP DGFVY RNSELI GQLGKAT+GNG+KDGL
Sbjct: 600  LLRPHAKMRVYLNLTVAEKSYGKSRETMCPKDGFVYIRNSELISGQLGKATVGNGSKDGL 659

Query: 995  FSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXX 816
            +SVLLRDY AHAAA+CMNRLAKLSARWIGNHGFSIGI+DV PG  L+             
Sbjct: 660  YSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVTPGDVLNKEKKLTIDKEYGQ 719

Query: 815  XXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQC 636
                IE Y +GKLEL PGC+ A+TLEA+ITG LNNIRE+ A VCM+NL+WRNSPLIMSQC
Sbjct: 720  CTDYIESYNSGKLELLPGCNRAETLEAKITGTLNNIRERTANVCMKNLNWRNSPLIMSQC 779

Query: 635  GSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLT 456
            GSKGSP NI QMIACVGQQSVGGRRA NGF+DR+LPHF R +  PDAKGFV+NSFYTGL+
Sbjct: 780  GSKGSPINICQMIACVGQQSVGGRRAPNGFVDRTLPHFERGAKDPDAKGFVQNSFYTGLS 839

Query: 455  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYG 276
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD+TVR+ASG +VQF+YG
Sbjct: 840  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVQYDNTVRNASGSIVQFVYG 899

Query: 275  DDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEIL----ELVVARLSKHDM 108
             DGMDP++ME K G PLN +RL+MK KATCPA    SL+  EI     E++  RL K  M
Sbjct: 900  GDGMDPAQMEEKSGLPLNFERLFMKAKATCPAAEEKSLNTEEIKKIVNEMIEERLPKSTM 959

Query: 107  TPEGGC 90
              E  C
Sbjct: 960  DLEEEC 965


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
            sativus]
          Length = 1400

 Score = 1358 bits (3515), Expect = 0.0
 Identities = 676/971 (69%), Positives = 784/971 (80%), Gaps = 15/971 (1%)
 Frame = -3

Query: 2933 FTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 2754
            FTKQPY+EDVGPRKIKS+QF+  SG EI K +E+QV+   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 2753 ANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERDR 2574
            ANK   CATCH +  DCPGHYGY +L LPVFNVGYF  IL +LKC+CKSC+RILL E+  
Sbjct: 71   ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130

Query: 2573 ISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMGIV 2415
              +L+KMRNPKLEAL+K  L K I+ KC       K  +CSRCGY+NG VKK+ +++GI+
Sbjct: 131  KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLGIL 190

Query: 2414 HDRSKLMDG--VSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLS 2241
            H R++  D   VSE+     + + D          +LNP RVL LF+R+ D+DC+LL+LS
Sbjct: 191  HYRARSKDAGVVSEDLRAPYNVSND----------ILNPFRVLCLFQRMSDEDCELLFLS 240

Query: 2240 DRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTS 2061
            +RPEKLIIT++LVPPIAIRPS  +DG + SNE+DIT +L  IIQ N S+ Q+L  ++  +
Sbjct: 241  NRPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQQNASVSQELSTSNSQA 299

Query: 2060 KCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYT 1881
            KCL +W++LQ EVAQ INSDVRG+P SMQ SKPL GF+QRLKGKQGRFRGNL GKRVE+T
Sbjct: 300  KCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFT 359

Query: 1880 ARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLA 1701
             RTVISPDPNLKITEV +PI +A++LTYPE V+++NIEKLR+CV+NGP KYPGA  +R  
Sbjct: 360  GRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHL 419

Query: 1700 SGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1521
             GS+++L    RK  AD LKYG+ VERHLEDGDVVLFNRQPSLHRMSIM HR ++MPWRT
Sbjct: 420  DGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRT 479

Query: 1520 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1341
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 480  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDF 539

Query: 1340 LTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPH 1161
            LTSSFLITR+DTFYDRA+FSLMCSYMGD MD +DLPTPAL+KP+ELWTGKQLF+VL+RPH
Sbjct: 540  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPH 599

Query: 1160 AQMRVFVNLTVFEKSY--IKG----RETLCPNDGFVYFRNSELICGQLGKATLGNGNKDG 999
            A M+V++NLTV EKSY  +KG    RET+CPNDGFVYFRNSELI GQ+GKATLGNGNKDG
Sbjct: 600  ASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDG 659

Query: 998  LFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXX 819
            L+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGI DVQPG  L             
Sbjct: 660  LYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYR 719

Query: 818  XXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQ 639
               K I  + TG L  + GCDAAQ+LE++IT ILN IRE  A VCM+NLHWRNSPLIMSQ
Sbjct: 720  DCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQ 779

Query: 638  CGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGL 459
            CGSKGSP NI+QM+ACVGQQSVGGRRA +GFIDRSLPHF R + TP AKGFV NSFY+GL
Sbjct: 780  CGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGL 839

Query: 458  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLY 279
            TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDS+VR+A G +VQF Y
Sbjct: 840  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCY 899

Query: 278  GDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPE 99
            GDDGMDP++MEGK G PLN +RL++K KATCP+ G+  LSP+E  E V  RLSK D +PE
Sbjct: 900  GDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPE 959

Query: 98   GGCSDAFKKSL 66
             GCS AF  SL
Sbjct: 960  CGCSPAFVGSL 970


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Cucumis melo]
          Length = 1400

 Score = 1357 bits (3513), Expect = 0.0
 Identities = 679/971 (69%), Positives = 784/971 (80%), Gaps = 15/971 (1%)
 Frame = -3

Query: 2933 FTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 2754
            FTKQPY+EDVGPRKIKS+QF+  SG EI K +E+QV+   +YD  RKP    LLD RMGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 2753 ANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERDR 2574
            ANK   C+TCH +  DCPGHYGY +L LPVFNVGYF  IL +LKC+CKSC+RILL E+  
Sbjct: 71   ANKGCKCSTCHANFGDCPGHYGYVNLSLPVFNVGYFTTILEILKCICKSCSRILLEEKLY 130

Query: 2573 ISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMGIV 2415
              +L+KMRNPKLEAL+K  L K I+ KC       K  KCSRCGY+NG VKK+ +++GI+
Sbjct: 131  KDFLRKMRNPKLEALRKCDLVKKIIKKCSTLTTGNKSTKCSRCGYLNGSVKKAVSMLGIL 190

Query: 2414 HDRSKLMDG--VSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLS 2241
            H R++  D   VSE+     + + D          +LNP RVL LF+R+ D+DC+LL+LS
Sbjct: 191  HYRARSKDAGVVSEDLRAPYNVSND----------ILNPFRVLCLFQRMSDEDCELLFLS 240

Query: 2240 DRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTS 2061
            DRPEKLIIT++LVPPIAIRPS  +DG + SNE+DIT +L  IIQ N S+ Q+L  ++  +
Sbjct: 241  DRPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQQNASVSQELSTSNSQA 299

Query: 2060 KCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYT 1881
            KCL +W++LQ EVAQ INSDVRG+P +MQ SKPL GF+QRLKGKQGRFRGNL GKRVE+T
Sbjct: 300  KCLESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFT 359

Query: 1880 ARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLA 1701
             RTVISPDPNLKITEV +PI +A++LTYPE V+ +NIEKLR+CV+NGP KYPGA  +R  
Sbjct: 360  GRTVISPDPNLKITEVAVPIHMARILTYPERVTSHNIEKLRQCVSNGPDKYPGARMLRHL 419

Query: 1700 SGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1521
             GS+++L    RK  AD LKYG+ VERHLEDGDVVLFNRQPSLHRMSIM HR ++MPWRT
Sbjct: 420  DGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRT 479

Query: 1520 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1341
            LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDF
Sbjct: 480  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDF 539

Query: 1340 LTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPH 1161
            LTSSFLITR+DTFYDRA+FSLMCSYMGD MD IDLPTPALIKP+ELWTGKQLF+VL+RPH
Sbjct: 540  LTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLIDLPTPALIKPIELWTGKQLFSVLVRPH 599

Query: 1160 AQMRVFVNLTVFEKSY--IKG----RETLCPNDGFVYFRNSELICGQLGKATLGNGNKDG 999
            A M+V++NLTV EKSY  +KG    RET+CPNDGFVYFRNSELI GQ+GKATLGNGNKDG
Sbjct: 600  ASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDG 659

Query: 998  LFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXX 819
            L+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGI DVQPG  L             
Sbjct: 660  LYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVXKKQTTILEGYR 719

Query: 818  XXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQ 639
               K I  + TG L  + GCDAAQ+LEA+IT ILN IRE  A VCM+NLHWRNSPLIMSQ
Sbjct: 720  DCDKQINLFNTGNLPPEAGCDAAQSLEAKITQILNGIREATANVCMQNLHWRNSPLIMSQ 779

Query: 638  CGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGL 459
            CGSKGSP NI+QM+ACVGQQSVGGRRA +GFIDRSLPHF R + TP AKGFV NSFY+GL
Sbjct: 780  CGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGL 839

Query: 458  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLY 279
            TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI+YDS+VR+A G +VQF Y
Sbjct: 840  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIYYDSSVRNAGGCIVQFCY 899

Query: 278  GDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPE 99
            GDDGMDP++MEGK G PLN +RL++K KATCP+ G+  LSP+E  E V  RLSK D +PE
Sbjct: 900  GDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSKDDASPE 959

Query: 98   GGCSDAFKKSL 66
             GCS AF  SL
Sbjct: 960  CGCSPAFIGSL 970


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1356 bits (3510), Expect = 0.0
 Identities = 684/980 (69%), Positives = 781/980 (79%), Gaps = 17/980 (1%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            Q    I FTKQPY+EDVGPRKI+SIQFSMMS +EIMKA+E+QV+   +Y  +R P +  L
Sbjct: 7    QKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIEGGL 66

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGPANK  TCATCHG  ++CPGHYGY  L LPV+NVGY + IL++LKC+CK C+R+
Sbjct: 67   LDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYCSRL 126

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-----KPKKCSRCGYINGVVKKSGT 2430
            LL E+    YLKKMRNPK+EAL+KT L K+I+ KC     K  KC RCGYING+VKK+  
Sbjct: 127  LLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVA 186

Query: 2429 VMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLL 2250
            V+GI+HDRSK+ + + E    AI+ TK+S+ +     Y+LNPV VL LF+R+ D DC++L
Sbjct: 187  VLGIIHDRSKVTESLQEFAS-AITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVL 245

Query: 2249 YLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTS 2070
            YLS+RPEKLIIT+I VPPIAIRPS  +DG + SNE+DIT +L  IIQ N SL+Q+L   +
Sbjct: 246  YLSERPEKLIITNIAVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQTNASLQQELVEAN 304

Query: 2069 PTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRV 1890
               K L  WE LQVEVAQYINSDVRGVP SMQ ++PL GF+QRLKGKQGRFRGNLSGKRV
Sbjct: 305  SAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRV 364

Query: 1889 EYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFV 1710
            EYT RTVISPDPNLKITEV IPI +A++LTYPE VS +NIEKLR+C+ NGP KYPGA  +
Sbjct: 365  EYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMI 424

Query: 1709 RLASGSLQNLRYGR-RKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIM 1533
            R   G+ + L YG+ R   A  LK G  V+RHLEDGDVVLFNRQPSLHRMSIM HRA+IM
Sbjct: 425  RYPDGTARVL-YGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 483

Query: 1532 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1353
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVAS
Sbjct: 484  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAS 543

Query: 1352 TQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVL 1173
            TQDFLTSSFLITR+DTFYDRA+FSLMC YMGD MD +DLPTPA++KPVELWTGKQLF+VL
Sbjct: 544  TQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVL 603

Query: 1172 IRPHAQMRVFVNLTVFEKSYIKGR-----------ETLCPNDGFVYFRNSELICGQLGKA 1026
            IRPHA MRV+VNLTV EK+Y               ET+CPNDGFVYFRNSELI GQLGKA
Sbjct: 604  IRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKA 663

Query: 1025 TLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXX 846
            TLGNGNKDGL+SVLLRDY AHA + CMNRLAKLSARWIGNHGFSIGI DVQP K LS   
Sbjct: 664  TLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKK 723

Query: 845  XXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHW 666
                          I+ Y  GKL+L+PGCDAAQTLEA IT ILN IRE A   CM +L W
Sbjct: 724  GKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPW 783

Query: 665  RNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGF 486
            RNSPLIMSQCGSKGSP NI+QM+ACVGQQSVGGRRA NGFIDRSLPHFPR +  P AKGF
Sbjct: 784  RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGF 843

Query: 485  VENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSA 306
            V NSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD++VR+A
Sbjct: 844  VANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNA 903

Query: 305  SGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVAR 126
             G +VQFLYGDDGMDP+ MEGK G PLN DRL MKVKATCP  G   LSP ++ E+V  +
Sbjct: 904  GGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVSEIVEKQ 963

Query: 125  LSKHDMTPEGGCSDAFKKSL 66
            L+ +    +  CS+AF  SL
Sbjct: 964  LAAYG---KESCSEAFLNSL 980


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
            hypothetical protein B456_003G139100 [Gossypium
            raimondii]
          Length = 1398

 Score = 1356 bits (3509), Expect = 0.0
 Identities = 682/991 (68%), Positives = 792/991 (79%), Gaps = 17/991 (1%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            Q   +I FTK+PY+EDVGPR+IKSI+FSM S +EI KA+E+QV+   +YD   +P +  L
Sbjct: 3    QRSQDIVFTKRPYIEDVGPRRIKSIKFSMFSDSEIAKAAEVQVYKGVYYDLQSRPIEGGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   CATC GS  DCPGHYGY  L+LPV+NVGY + IL++LKC+CKSC+RI
Sbjct: 63   LDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPLVLPVYNVGYLSTILDILKCICKSCSRI 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 2433
            LL ++    YLKKMR PK E L+K  + K+++ KC      K  KCSRCGY+NG VKK+ 
Sbjct: 123  LLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVKKCTAMAGGKAVKCSRCGYLNGTVKKAP 182

Query: 2432 TVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDL 2253
             ++G+ HDRSK+ D   EE + AIS TK+S+ SS     VLNPV+VL LF+R+ D DC+L
Sbjct: 183  KMIGVFHDRSKVNDNSLEELKSAISHTKESK-SSINTSSVLNPVKVLSLFKRMTDVDCEL 241

Query: 2252 LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCT 2073
            LYLSDRPEK IIT+I VPP AIRPS  VDG + SNE+DIT +L  IIQAN+SLRQ L  +
Sbjct: 242  LYLSDRPEKFIITNIAVPPTAIRPSVPVDGSQ-SNENDITERLKRIIQANSSLRQQLVDS 300

Query: 2072 SPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKR 1893
            +    CL  W+LLQV+VAQYINSDVRGVP  MQ ++PL GF+QRLKGKQGRFRGNLSGKR
Sbjct: 301  NAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFLQRLKGKQGRFRGNLSGKR 360

Query: 1892 VEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANF 1713
            VE+T RTVISPDPNLKITEV IPI +A++L+YPE VS +NIEKLR+CV NGP KYPGA  
Sbjct: 361  VEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSSHNIEKLRQCVRNGPSKYPGAVK 420

Query: 1712 VRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIM 1533
            VR   GS + L    RK  AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIM HRA+IM
Sbjct: 421  VRYPDGSARLLIGDYRKRLADELKFGCIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 480

Query: 1532 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1353
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE+LVAS
Sbjct: 481  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEVLVAS 540

Query: 1352 TQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVL 1173
            TQDFLTSSFLITRRDTFYDRA+FSL+CSYMGDAMD IDLPTP L+KPVELWTGKQLFNVL
Sbjct: 541  TQDFLTSSFLITRRDTFYDRATFSLICSYMGDAMDLIDLPTPTLLKPVELWTGKQLFNVL 600

Query: 1172 IRPHAQMRVFVNLTVFEKSYIK-----------GRETLCPNDGFVYFRNSELICGQLGKA 1026
            +RPHA +RV++NLTV E++Y +             ET+CPNDGFVY RNSEL+CGQLGKA
Sbjct: 601  LRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRNSELLCGQLGKA 660

Query: 1025 TLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXX 846
            TLGNGNKDGL+S+LLRDY+AHAAA+CMNRLAK+SARWIGNHGFSIGI DVQPGK L+   
Sbjct: 661  TLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDDVQPGKRLNDAK 720

Query: 845  XXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHW 666
                        + I+ +  GKL+L+PGCDAAQTLEA IT +LN IR++   VCM  LHW
Sbjct: 721  GVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDETGKVCMRELHW 780

Query: 665  RNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGF 486
            RNSPLIMSQCGSKGS  NI+QMIACVGQQSVGGRRA NGFIDRSLPHF R S TP AKGF
Sbjct: 781  RNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGF 840

Query: 485  VENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSA 306
            V NSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLIKALEDLSIHYD+T R+A
Sbjct: 841  VANSFYSGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTCRNA 900

Query: 305  SGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVAR 126
            SG +VQF+YGDDGMDP+ MEGK G PLN DRL MKVKATCP      L    I +++  +
Sbjct: 901  SGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLMKVKATCPPVDQKYLPADAIPQMLEEQ 960

Query: 125  LSKHDMTPEGGCSDAFKKSLLDEEGFMQNKE 33
            + KHD  P+G CS+AFKKSL   +GF++ ++
Sbjct: 961  VVKHD--PDGVCSEAFKKSL---KGFLEGQK 986


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Gossypium raimondii]
          Length = 1395

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 681/991 (68%), Positives = 790/991 (79%), Gaps = 17/991 (1%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            Q   +I FTK+PY+EDVGPR+IKSI+FSM S +EI KA+E+QV+   +YD   +P +  L
Sbjct: 3    QRSQDIVFTKRPYIEDVGPRRIKSIKFSMFSDSEIAKAAEVQVYKGVYYDLQSRPIEGGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   CATC GS  DCPGHYGY  L+LPV+NVGY + IL++LKC+CKSC+RI
Sbjct: 63   LDPRMGPPNKSGKCATCDGSFGDCPGHYGYLPLVLPVYNVGYLSTILDILKCICKSCSRI 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 2433
            LL ++    YLKKMR PK E L+K  + K+++ KC      K  KCSRCGY+NG VKK+ 
Sbjct: 123  LLDDKLAKDYLKKMRAPKTEPLKKAEIMKSVVKKCTAMAGGKAVKCSRCGYLNGTVKKAP 182

Query: 2432 TVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDL 2253
             ++G+ HDRSK+ D   EE + AIS TK+S+ SS     VLNPV+VL LF+R+ D DC+L
Sbjct: 183  KMIGVFHDRSKVNDNSLEELKSAISHTKESK-SSINTSSVLNPVKVLSLFKRMTDVDCEL 241

Query: 2252 LYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCT 2073
            LYLSDRPEK IIT+I VPP AIRPS  VDG    NE+DIT +L  IIQAN+SLRQ L  +
Sbjct: 242  LYLSDRPEKFIITNIAVPPTAIRPSVPVDG----NENDITERLKRIIQANSSLRQQLVDS 297

Query: 2072 SPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKR 1893
            +    CL  W+LLQV+VAQYINSDVRGVP  MQ ++PL GF+QRLKGKQGRFRGNLSGKR
Sbjct: 298  NAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFLQRLKGKQGRFRGNLSGKR 357

Query: 1892 VEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANF 1713
            VE+T RTVISPDPNLKITEV IPI +A++L+YPE VS +NIEKLR+CV NGP KYPGA  
Sbjct: 358  VEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSSHNIEKLRQCVRNGPSKYPGAVK 417

Query: 1712 VRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIM 1533
            VR   GS + L    RK  AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIM HRA+IM
Sbjct: 418  VRYPDGSARLLIGDYRKRLADELKFGCIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 477

Query: 1532 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1353
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGE+LVAS
Sbjct: 478  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEVLVAS 537

Query: 1352 TQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVL 1173
            TQDFLTSSFLITRRDTFYDRA+FSL+CSYMGDAMD IDLPTP L+KPVELWTGKQLFNVL
Sbjct: 538  TQDFLTSSFLITRRDTFYDRATFSLICSYMGDAMDLIDLPTPTLLKPVELWTGKQLFNVL 597

Query: 1172 IRPHAQMRVFVNLTVFEKSYIK-----------GRETLCPNDGFVYFRNSELICGQLGKA 1026
            +RPHA +RV++NLTV E++Y +             ET+CPNDGFVY RNSEL+CGQLGKA
Sbjct: 598  LRPHASVRVYLNLTVKERNYSRKIAKRIGDKEIEVETMCPNDGFVYIRNSELLCGQLGKA 657

Query: 1025 TLGNGNKDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXX 846
            TLGNGNKDGL+S+LLRDY+AHAAA+CMNRLAK+SARWIGNHGFSIGI DVQPGK L+   
Sbjct: 658  TLGNGNKDGLYSILLRDYNAHAAATCMNRLAKMSARWIGNHGFSIGIDDVQPGKRLNDAK 717

Query: 845  XXXXXXXXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHW 666
                        + I+ +  GKL+L+PGCDAAQTLEA IT +LN IR++   VCM  LHW
Sbjct: 718  GVTLSGNYKKCDEQIQMFNEGKLQLKPGCDAAQTLEANITEVLNKIRDETGKVCMRELHW 777

Query: 665  RNSPLIMSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGF 486
            RNSPLIMSQCGSKGS  NI+QMIACVGQQSVGGRRA NGFIDRSLPHF R S TP AKGF
Sbjct: 778  RNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGF 837

Query: 485  VENSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSA 306
            V NSFY+GLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRLIKALEDLSIHYD+T R+A
Sbjct: 838  VANSFYSGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTCRNA 897

Query: 305  SGGVVQFLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVAR 126
            SG +VQF+YGDDGMDP+ MEGK G PLN DRL MKVKATCP      L    I +++  +
Sbjct: 898  SGCIVQFIYGDDGMDPASMEGKSGFPLNFDRLLMKVKATCPPVDQKYLPADAIPQMLEEQ 957

Query: 125  LSKHDMTPEGGCSDAFKKSLLDEEGFMQNKE 33
            + KHD  P+G CS+AFKKSL   +GF++ ++
Sbjct: 958  VVKHD--PDGVCSEAFKKSL---KGFLEGQK 983


>ref|XP_010033188.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit rpc1 [Eucalyptus grandis]
          Length = 1402

 Score = 1347 bits (3486), Expect = 0.0
 Identities = 677/975 (69%), Positives = 774/975 (79%), Gaps = 19/975 (1%)
 Frame = -3

Query: 2933 FTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 2754
            FTK+PY+E+VGPR+IKSI FSM S +EI   +E+QV+   +YD  RKP +  LLD RMGP
Sbjct: 8    FTKEPYVENVGPRRIKSIHFSMFSASEIGNVAEVQVYKGVYYDGTRKPLEGGLLDPRMGP 67

Query: 2753 ANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERDR 2574
            ANK   C+TCHG   DCPGHYGY  L LPV+NVG+ + IL VLK +CKSC+RILL E  R
Sbjct: 68   ANKSCRCSTCHGDFKDCPGHYGYLTLALPVYNVGFLDKILEVLKSLCKSCSRILLDEESR 127

Query: 2573 ISYLKKMRNPKLEALQKTGLAKAILNKCKPKKCSRCGYINGVVKKSGTVMGIVHDRSKLM 2394
               L+K+R+PK +AL K  LAK  ++KCKP +C+ CGYING VKK+   +  +HDRSK  
Sbjct: 128  RKELEKIRHPKRDALNKAELAKKTVSKCKPGRCAHCGYINGTVKKAIGAISYIHDRSKTS 187

Query: 2393 DGVSEECEVAISKTKDSRTSSFTVVYVLNPVR---------VLGLFRRILDQDCDLLYLS 2241
            D   EEC+ AIS TK+S+ S      ++NP           VL LF R+ D+DC+LL ++
Sbjct: 188  DRSLEECKSAISHTKESKGSLSVASNIINPGMFCNIINPRDVLSLFERMSDEDCELLNIA 247

Query: 2240 DRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTS 2061
            DRPEK +IT I VPPIAIRPS  ++G + SNE+DIT +L  IIQ N SL+Q+L       
Sbjct: 248  DRPEKFMITTIAVPPIAIRPSVMMEGSQ-SNENDITERLKRIIQVNASLQQELQ----DM 302

Query: 2060 KCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYT 1881
            K + AW+ LQ EV  YINSDVRGVP   Q +KPL GFIQRLKGKQGRFRGNLSGKRVEYT
Sbjct: 303  KNMAAWDHLQAEVGLYINSDVRGVPYPFQVAKPLAGFIQRLKGKQGRFRGNLSGKRVEYT 362

Query: 1880 ARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLA 1701
             RTVISPDPNLKITEV IPI +A++LTYPE V+QYNIEKLR+CV NGP KYPGA  +R  
Sbjct: 363  GRTVISPDPNLKITEVAIPIQMARILTYPERVNQYNIEKLRQCVRNGPYKYPGARMIRYP 422

Query: 1700 SGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRT 1521
             G ++ L    RK  AD L +G  V+RHLEDGDVVLFNRQPSLHRMSIM HRA++MPWRT
Sbjct: 423  DGEMRLLMGSFRKRLADELGFGVIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARVMPWRT 482

Query: 1520 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1341
            LRFNESVCNPYNADFDGDEMNMHVPQTEEAR EALMLMGVQNNLCTPKNGEILVASTQDF
Sbjct: 483  LRFNESVCNPYNADFDGDEMNMHVPQTEEARAEALMLMGVQNNLCTPKNGEILVASTQDF 542

Query: 1340 LTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPH 1161
            LTSSFLITR+D FYDRA+FSL+CSYMGD MD IDLPTPA+IKP+ELWTGKQ+F+VL+RP+
Sbjct: 543  LTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPAIIKPIELWTGKQIFSVLLRPN 602

Query: 1160 AQMRVFVNLTVFEKSYIKGR-------ETLCPNDGFVYFRNSELICGQLGKATLGNGNKD 1002
            A+MRVFVNLT+ EK+Y K +       ET+CPNDGFVYFRNSELI GQLGKATLGNGNKD
Sbjct: 603  ARMRVFVNLTLKEKNYSKPKNASERELETMCPNDGFVYFRNSELISGQLGKATLGNGNKD 662

Query: 1001 GLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXX 822
            GL+S+LLRDY+AHAAASCMNRLAKLSARWIGNHGFSIGI DVQP   L+           
Sbjct: 663  GLYSILLRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPDNDLNERKRETILNGY 722

Query: 821  XXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMS 642
                + IE Y  GKL+LQPGCDAAQTLEA ITGILN IR +   VCM+ LHWRNSPLIMS
Sbjct: 723  NSCDEKIELYNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQVCMKKLHWRNSPLIMS 782

Query: 641  QCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTG 462
            QCGSKGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPR S TP AKGFV NSFY+G
Sbjct: 783  QCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSG 842

Query: 461  LTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFL 282
            LTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD+TVR+ASG +VQFL
Sbjct: 843  LTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFL 902

Query: 281  YGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTP 102
            YGDDGMDP+ MEGK+G PLN DRL+MKVKATCP+R H  LSP EI  L+  +L + + TP
Sbjct: 903  YGDDGMDPALMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTP 962

Query: 101  EGGCSD---AFKKSL 66
            +GG SD   AFKKS+
Sbjct: 963  DGGLSDASKAFKKSV 977


>ref|XP_008358068.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Malus domestica]
          Length = 1390

 Score = 1345 bits (3482), Expect = 0.0
 Identities = 674/972 (69%), Positives = 785/972 (80%), Gaps = 14/972 (1%)
 Frame = -3

Query: 2939 IQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 2760
            I FTKQP++ED G  +I+  +FS MS  EI K +E+Q+F   +YD +RKP +  LLD R+
Sbjct: 9    IIFTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRL 68

Query: 2759 GPANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 2583
            GPAN+    CATC G+  DCPGH+GY  L LPVFNVGY + I+++LKC+CK C+ ILL E
Sbjct: 69   GPANRSSGACATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEE 128

Query: 2582 RDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVM 2424
              RI +LKKMR PK+E ++K+ L K I+ KC       +P KCS+CG+ING VKK+  V+
Sbjct: 129  GMRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVL 188

Query: 2423 GIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYL 2244
            GI+HDRSK + GV ++   AIS TK+S+ S     + LNP RV  LF+R++D+DC+LLYL
Sbjct: 189  GIIHDRSKFI-GVMDDFRSAISHTKESKASFNPATHNLNPARVFSLFKRMVDEDCELLYL 247

Query: 2243 SDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPT 2064
            SDRPE LI+T+I VPPI IRPS  VDG + SNE+DIT +L  IIQ+N+SLRQDL   S  
Sbjct: 248  SDRPENLIMTNIAVPPIPIRPSVIVDGSQ-SNENDITERLKRIIQSNSSLRQDLIEASSA 306

Query: 2063 SKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEY 1884
            +KCL +WE+LQVEVAQYINSDVRGVP SMQ+SKPL GF+QRLKGK GRFRGNLSGKRVEY
Sbjct: 307  AKCLASWEILQVEVAQYINSDVRGVPFSMQTSKPLAGFVQRLKGKGGRFRGNLSGKRVEY 366

Query: 1883 TARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRL 1704
            T RTVISPDPNLKITEVGIPI +A +LTYPE VS +NIEKLR+CV+NGP KYPGA  +R 
Sbjct: 367  TGRTVISPDPNLKITEVGIPIKMATILTYPERVSHHNIEKLRQCVSNGPDKYPGARVLRN 426

Query: 1703 ASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWR 1524
            + G+   L+  R K  AD+LKYGD VERHLEDGDVVLFNRQPSLHRMS+M HRAKIMPWR
Sbjct: 427  SDGTEWVLKVNR-KSIADSLKYGDIVERHLEDGDVVLFNRQPSLHRMSLMCHRAKIMPWR 485

Query: 1523 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1344
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGE+LVASTQD
Sbjct: 486  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEVLVASTQD 545

Query: 1343 FLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRP 1164
            FLTSSFLITR+DTFYDRASFSLMCSYMGD  D IDLPTP++IKP+ELWTGKQLF+VL+RP
Sbjct: 546  FLTSSFLITRKDTFYDRASFSLMCSYMGDGADTIDLPTPSVIKPIELWTGKQLFSVLVRP 605

Query: 1163 HAQMRVFVNLTVFEKSYIK---GR--ETLCPNDGFVYFRNSELICGQLGKATLGNGNKDG 999
            ++ +RV++N TV EKSY K   GR  E +CPNDGFVYFRNSELI GQLGK TLGNGNKDG
Sbjct: 606  NSNVRVYLNXTVTEKSYTKTGDGREIEAMCPNDGFVYFRNSELIAGQLGKGTLGNGNKDG 665

Query: 998  LFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXX 819
            L+SVLLRDY AHAAASCMNRLAKLSARWIGNHGFSIGISDVQP  SL             
Sbjct: 666  LYSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDSLYDEKEKLIKEGYD 725

Query: 818  XXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQ 639
                 I+ Y  G+L L PG DAAQ+LE  IT +LNNIR++   +CM+ LHWRNSPLIMSQ
Sbjct: 726  KCGGQIKLYNEGQLPLVPGFDAAQSLETGITSLLNNIRDQTGKLCMQKLHWRNSPLIMSQ 785

Query: 638  CGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGL 459
            CGSKGSP NI+QM+ACVGQQSVGGRRA NGFIDRSLPHFPR +  P AKGFV +SFY+GL
Sbjct: 786  CGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRFAKMPAAKGFVASSFYSGL 845

Query: 458  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLY 279
            TATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD+TVR++SG +VQF Y
Sbjct: 846  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNSSGSIVQFCY 905

Query: 278  GDDGMDPSRMEGKD-GTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTP 102
            GDDGMDP+ MEGK+ G PL+ +RL++K KATCPA G  +LS  E+ E+V +RLSKHDMTP
Sbjct: 906  GDDGMDPAMMEGKESGAPLDFNRLFLKAKATCPAGGSDTLSXEEVSEIVSSRLSKHDMTP 965

Query: 101  EGGCSDAFKKSL 66
            +GGC+  FK SL
Sbjct: 966  DGGCAAGFKTSL 977


>ref|XP_008358064.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Malus domestica]
          Length = 1419

 Score = 1345 bits (3482), Expect = 0.0
 Identities = 674/972 (69%), Positives = 785/972 (80%), Gaps = 14/972 (1%)
 Frame = -3

Query: 2939 IQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRM 2760
            I FTKQP++ED G  +I+  +FS MS  EI K +E+Q+F   +YD +RKP +  LLD R+
Sbjct: 9    IIFTKQPFIEDEGHLRIEKWKFSAMSDKEIRKMAEVQIFKGQYYDSNRKPIEGGLLDPRL 68

Query: 2759 GPANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSE 2583
            GPAN+    CATC G+  DCPGH+GY  L LPVFNVGY + I+++LKC+CK C+ ILL E
Sbjct: 69   GPANRSSGACATCGGTTKDCPGHFGYLVLALPVFNVGYLSTIVDILKCICKLCSGILLEE 128

Query: 2582 RDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVM 2424
              RI +LKKMR PK+E ++K+ L K I+ KC       +P KCS+CG+ING VKK+  V+
Sbjct: 129  GMRIEFLKKMRRPKMEPMKKSELMKVIVKKCNSLTTNNRPVKCSKCGFINGSVKKAVGVL 188

Query: 2423 GIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYL 2244
            GI+HDRSK + GV ++   AIS TK+S+ S     + LNP RV  LF+R++D+DC+LLYL
Sbjct: 189  GIIHDRSKFI-GVMDDFRSAISHTKESKASFNPATHNLNPARVFSLFKRMVDEDCELLYL 247

Query: 2243 SDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPT 2064
            SDRPE LI+T+I VPPI IRPS  VDG + SNE+DIT +L  IIQ+N+SLRQDL   S  
Sbjct: 248  SDRPENLIMTNIAVPPIPIRPSVIVDGSQ-SNENDITERLKRIIQSNSSLRQDLIEASSA 306

Query: 2063 SKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEY 1884
            +KCL +WE+LQVEVAQYINSDVRGVP SMQ+SKPL GF+QRLKGK GRFRGNLSGKRVEY
Sbjct: 307  AKCLASWEILQVEVAQYINSDVRGVPFSMQTSKPLAGFVQRLKGKGGRFRGNLSGKRVEY 366

Query: 1883 TARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRL 1704
            T RTVISPDPNLKITEVGIPI +A +LTYPE VS +NIEKLR+CV+NGP KYPGA  +R 
Sbjct: 367  TGRTVISPDPNLKITEVGIPIKMATILTYPERVSHHNIEKLRQCVSNGPDKYPGARVLRN 426

Query: 1703 ASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWR 1524
            + G+   L+  R K  AD+LKYGD VERHLEDGDVVLFNRQPSLHRMS+M HRAKIMPWR
Sbjct: 427  SDGTEWVLKVNR-KSIADSLKYGDIVERHLEDGDVVLFNRQPSLHRMSLMCHRAKIMPWR 485

Query: 1523 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1344
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGE+LVASTQD
Sbjct: 486  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEVLVASTQD 545

Query: 1343 FLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRP 1164
            FLTSSFLITR+DTFYDRASFSLMCSYMGD  D IDLPTP++IKP+ELWTGKQLF+VL+RP
Sbjct: 546  FLTSSFLITRKDTFYDRASFSLMCSYMGDGADTIDLPTPSVIKPIELWTGKQLFSVLVRP 605

Query: 1163 HAQMRVFVNLTVFEKSYIK---GR--ETLCPNDGFVYFRNSELICGQLGKATLGNGNKDG 999
            ++ +RV++N TV EKSY K   GR  E +CPNDGFVYFRNSELI GQLGK TLGNGNKDG
Sbjct: 606  NSNVRVYLNXTVTEKSYTKTGDGREIEAMCPNDGFVYFRNSELIAGQLGKGTLGNGNKDG 665

Query: 998  LFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXX 819
            L+SVLLRDY AHAAASCMNRLAKLSARWIGNHGFSIGISDVQP  SL             
Sbjct: 666  LYSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDSLYDEKEKLIKEGYD 725

Query: 818  XXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQ 639
                 I+ Y  G+L L PG DAAQ+LE  IT +LNNIR++   +CM+ LHWRNSPLIMSQ
Sbjct: 726  KCGGQIKLYNEGQLPLVPGFDAAQSLETGITSLLNNIRDQTGKLCMQKLHWRNSPLIMSQ 785

Query: 638  CGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGL 459
            CGSKGSP NI+QM+ACVGQQSVGGRRA NGFIDRSLPHFPR +  P AKGFV +SFY+GL
Sbjct: 786  CGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRFAKMPAAKGFVASSFYSGL 845

Query: 458  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLY 279
            TATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD+TVR++SG +VQF Y
Sbjct: 846  TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNSSGSIVQFCY 905

Query: 278  GDDGMDPSRMEGKD-GTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTP 102
            GDDGMDP+ MEGK+ G PL+ +RL++K KATCPA G  +LS  E+ E+V +RLSKHDMTP
Sbjct: 906  GDDGMDPAMMEGKESGAPLDFNRLFLKAKATCPAGGSDTLSXEEVSEIVSSRLSKHDMTP 965

Query: 101  EGGCSDAFKKSL 66
            +GGC+  FK SL
Sbjct: 966  DGGCAAGFKTSL 977


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
            DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
            sylvestris]
          Length = 1390

 Score = 1343 bits (3477), Expect = 0.0
 Identities = 667/972 (68%), Positives = 779/972 (80%), Gaps = 7/972 (0%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            +T   IQFTK+PY+EDVGPRKIKSIQFS+ S  EI+K  E++V+   +YD  +KP  N L
Sbjct: 3    RTQEIIQFTKEPYIEDVGPRKIKSIQFSLFSEVEILKLGEVEVYRGVYYDSTKKPIPNGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   C TCHG+  +CPGHYGY  L LPV+NVGY   ++++LKC+CK C+ I
Sbjct: 63   LDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 2436
            LL +++R  +LKKMRNP+ E L K+ L K ++ KC       K   CS+CGY+NG+VKK 
Sbjct: 123  LLDDKERRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKSVTCSKCGYMNGMVKKG 182

Query: 2435 GTVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCD 2256
               + I+H+R        +E   AIS   D +TS  +V   ++P  V  LF+ + D+DC+
Sbjct: 183  Q--LKIIHERGNRF---LDEFNAAISHKIDLKTS-VSVPPEIDPKAVYSLFKNMSDEDCE 236

Query: 2255 LLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHC 2076
            LLYLSDRPEKL++T I VPPIAIRPS FVDGG  SNE+DIT +L  IIQ N  L +D+  
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQENARLLEDISD 296

Query: 2075 TSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 1896
            TS  +K L AW  LQ+EVAQYINSDVRGVPL +Q+SKP+ GF QRLKGKQGRFRGNLSGK
Sbjct: 297  TSFQNKSLNAWVGLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGK 356

Query: 1895 RVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGAN 1716
            RVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEKLR+CV NGP KYPGA 
Sbjct: 357  RVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 416

Query: 1715 FVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1536
            F++   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIMSHRA+I
Sbjct: 417  FIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 476

Query: 1535 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1356
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA
Sbjct: 477  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 536

Query: 1355 STQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNV 1176
            STQDFLTSSFLITR+DTFYDRASFSL+CSYMGD MD IDLPTPALIKPVELWTGKQLF V
Sbjct: 537  STQDFLTSSFLITRKDTFYDRASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGV 596

Query: 1175 LIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGL 996
            L+RP+++MRV+VNLTV EKSY    ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGL
Sbjct: 597  LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 656

Query: 995  FSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXX 816
            +SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG++L              
Sbjct: 657  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQEEIYQNYKK 716

Query: 815  XXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQC 636
                I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +CM+ LHWRNSPLIMSQC
Sbjct: 717  CEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMALNKVRDDIGKICMKALHWRNSPLIMSQC 776

Query: 635  GSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLT 456
            GSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  P AKGFV +SF+ GL+
Sbjct: 777  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLS 836

Query: 455  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYG 276
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVR+AS  ++QF+YG
Sbjct: 837  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASASIIQFMYG 896

Query: 275  DDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEG 96
            DDGMDPS+ME K G PLN  RL+MKVKATCP RG   LS +EI E+V  RLS HDM+PEG
Sbjct: 897  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKGLSYSEICEIVNERLSYHDMSPEG 956

Query: 95   GCSDAFKKSLLD 60
            GCS+AF+ SL D
Sbjct: 957  GCSEAFRASLSD 968


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
            [Nicotiana tomentosiformis]
            gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 1375

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 666/972 (68%), Positives = 779/972 (80%), Gaps = 7/972 (0%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            +T   IQFTKQPY+EDVGPRKIKSIQFS+ S  EI+K  E++V+   +Y+  +KP  N L
Sbjct: 3    RTQEIIQFTKQPYIEDVGPRKIKSIQFSLFSEAEILKLGEVEVYRGVYYESTKKPIPNGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   C TCHG+  +CPGHYGY  L LPV+NVGY   ++++LKC+CK C+ I
Sbjct: 63   LDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 2436
            LL +++   +LKKMRNP+ E L K+ L K ++ KC       K   CS+CGY+NG+VKK 
Sbjct: 123  LLDDKECRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKTVTCSKCGYMNGMVKKG 182

Query: 2435 GTVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCD 2256
               + I+H+R        +E   AIS   + +TS  +V   ++P  V  LF+ + D+DC+
Sbjct: 183  Q--LKIIHERGNRF---LDEFNAAISHKIELKTS-VSVPPEIDPKAVYSLFKNMSDEDCE 236

Query: 2255 LLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHC 2076
            LLYLSDRPEKL++T I VPPIAIRPS FVDGG  SNE+DIT +L  IIQAN  L +D+  
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANARLLEDISD 296

Query: 2075 TSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 1896
            TS  +K L AW  LQ+EVAQYINSDVRGVPL +Q+SKP+ GF QRLKGKQGRFRGNLSGK
Sbjct: 297  TSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGK 356

Query: 1895 RVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGAN 1716
            RVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEKLR+CV NGP KYPGA 
Sbjct: 357  RVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 416

Query: 1715 FVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1536
            F++   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIMSHRA+I
Sbjct: 417  FIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 476

Query: 1535 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1356
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA
Sbjct: 477  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 536

Query: 1355 STQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNV 1176
            STQDFLTSSFLITR+DTFY+RASFSL+CSYMGD MD IDLPTPALIKPVELWTGKQLF V
Sbjct: 537  STQDFLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGV 596

Query: 1175 LIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGL 996
            L+RP+++MRV+VNLTV EKSY    ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGL
Sbjct: 597  LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 656

Query: 995  FSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXX 816
            +SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+ L              
Sbjct: 657  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKK 716

Query: 815  XXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQC 636
                I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +CM+ LHWRNSPLIMSQC
Sbjct: 717  CEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQC 776

Query: 635  GSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLT 456
            GSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  P AKGFV +SF+ GL+
Sbjct: 777  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLS 836

Query: 455  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYG 276
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVR+AS  ++QF+YG
Sbjct: 837  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYG 896

Query: 275  DDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEG 96
            DDGMDPS+ME K G PLN  RL+MKVKATCP RG  SLS +EI E+V  RLS HDM+PEG
Sbjct: 897  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEG 956

Query: 95   GCSDAFKKSLLD 60
            GCS+AF+ SL D
Sbjct: 957  GCSEAFRASLSD 968


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
            [Nicotiana tomentosiformis]
            gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
            RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 1390

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 666/972 (68%), Positives = 779/972 (80%), Gaps = 7/972 (0%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            +T   IQFTKQPY+EDVGPRKIKSIQFS+ S  EI+K  E++V+   +Y+  +KP  N L
Sbjct: 3    RTQEIIQFTKQPYIEDVGPRKIKSIQFSLFSEAEILKLGEVEVYRGVYYESTKKPIPNGL 62

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   C TCHG+  +CPGHYGY  L LPV+NVGY   ++++LKC+CK C+ I
Sbjct: 63   LDPRMGPPNKNGGCETCHGNFRECPGHYGYLVLTLPVYNVGYLGTVVDLLKCICKCCSSI 122

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKS 2436
            LL +++   +LKKMRNP+ E L K+ L K ++ KC       K   CS+CGY+NG+VKK 
Sbjct: 123  LLDDKECRVFLKKMRNPRTEPLMKSELQKKVVKKCTSMTSGQKTVTCSKCGYMNGMVKKG 182

Query: 2435 GTVMGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCD 2256
               + I+H+R        +E   AIS   + +TS  +V   ++P  V  LF+ + D+DC+
Sbjct: 183  Q--LKIIHERGNRF---LDEFNAAISHKIELKTS-VSVPPEIDPKAVYSLFKNMSDEDCE 236

Query: 2255 LLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHC 2076
            LLYLSDRPEKL++T I VPPIAIRPS FVDGG  SNE+DIT +L  IIQAN  L +D+  
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANARLLEDISD 296

Query: 2075 TSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGK 1896
            TS  +K L AW  LQ+EVAQYINSDVRGVPL +Q+SKP+ GF QRLKGKQGRFRGNLSGK
Sbjct: 297  TSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSGFTQRLKGKQGRFRGNLSGK 356

Query: 1895 RVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGAN 1716
            RVEYT RTVISPDPNLKITEV IPIL+A++LTYPE VSQ+NIEKLR+CV NGP KYPGA 
Sbjct: 357  RVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 416

Query: 1715 FVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKI 1536
            F++   G+  +L +  RK +AD LK+G  V+RHLEDGD+VLFNRQPSLHRMSIMSHRA+I
Sbjct: 417  FIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 476

Query: 1535 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1356
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA
Sbjct: 477  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 536

Query: 1355 STQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNV 1176
            STQDFLTSSFLITR+DTFY+RASFSL+CSYMGD MD IDLPTPALIKPVELWTGKQLF V
Sbjct: 537  STQDFLTSSFLITRKDTFYERASFSLICSYMGDGMDPIDLPTPALIKPVELWTGKQLFGV 596

Query: 1175 LIRPHAQMRVFVNLTVFEKSYIKGRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGL 996
            L+RP+++MRV+VNLTV EKSY    ET+CP+DGFVYFRNSELI GQLGKATLGNGNKDGL
Sbjct: 597  LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 656

Query: 995  FSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXX 816
            +SVLLRDY +HAAA+CMNRLAKLSARWIGNHGFSIGI DV PG+ L              
Sbjct: 657  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGEILVKQKLEEIHQNYKK 716

Query: 815  XXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQC 636
                I+ +  GKL +QPGCDAAQTLEAE+T  LN +R+    +CM+ LHWRNSPLIMSQC
Sbjct: 717  CEDRIQQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALHWRNSPLIMSQC 776

Query: 635  GSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLT 456
            GSKGSP NI+QMIACVGQQSVGGRRA +GFIDRSLPHFP  S  P AKGFV +SF+ GL+
Sbjct: 777  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPTKSKFPAAKGFVAHSFFDGLS 836

Query: 455  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYG 276
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVR+AS  ++QF+YG
Sbjct: 837  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDNTVRNASTSIIQFMYG 896

Query: 275  DDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEG 96
            DDGMDPS+ME K G PLN  RL+MKVKATCP RG  SLS +EI E+V  RLS HDM+PEG
Sbjct: 897  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPRGEKSLSYSEICEIVNERLSYHDMSPEG 956

Query: 95   GCSDAFKKSLLD 60
            GCS+AF+ SL D
Sbjct: 957  GCSEAFRASLSD 968


>ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Tarenaya
            hassleriana]
          Length = 1376

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 670/975 (68%), Positives = 787/975 (80%), Gaps = 12/975 (1%)
 Frame = -3

Query: 2954 QTDAEIQFTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNAL 2775
            Q   EI+FTK+PY+EDVGPR+IKSI+FS+ S TE+MKA+E+QV+   +YD + KP +  L
Sbjct: 2    QATKEIEFTKKPYIEDVGPRRIKSIEFSIFSETEVMKAAEVQVWQGVYYDTNGKPIEGGL 61

Query: 2774 LDSRMGPANKFITCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARI 2595
            LD RMGP NK   C TC G+  +CPGHYGY  L LPV+N+GYFN IL++LKC+CK C+R+
Sbjct: 62   LDPRMGPPNKKGKCTTCDGNFQNCPGHYGYLKLALPVYNIGYFNNILDILKCICKRCSRM 121

Query: 2594 LLSERDRISYLKKMRNPKLEALQKTGLAKAILNKC------KPKKCSRCGYINGVVKKSG 2433
            LL E+    YLKKMRNPK+E+L+KT LAKA++ KC      K   C +CGY+NG+VKK+ 
Sbjct: 122  LLDEKLSEDYLKKMRNPKMESLKKTELAKAVVKKCSAMASSKIITCKKCGYLNGMVKKAA 181

Query: 2432 TV--MGIVHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDC 2259
            T   +GI HDRS++ +G  EE + AIS TK+S  +   + YVLNPV VL LF+ + ++DC
Sbjct: 182  TSSGIGISHDRSRIHEGDVEEFKSAISHTKESSGAINPITYVLNPVSVLALFKGMSNKDC 241

Query: 2258 DLLYLSDRPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLH 2079
            +LLYL+DRPEKLIIT I VPPI+IRPS  + GG  SNE+DIT +L  +IQ N SLRQ L 
Sbjct: 242  ELLYLADRPEKLIITSIAVPPISIRPSVII-GGTQSNENDITERLKRVIQNNASLRQFLV 300

Query: 2078 CTSPTSKCLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSG 1899
              + + K L AWE LQVEVAQYINSDVRGVPL+MQ SKPL GFIQRLKGKQGRFRGNLSG
Sbjct: 301  EPTTSPKNLHAWESLQVEVAQYINSDVRGVPLAMQPSKPLSGFIQRLKGKQGRFRGNLSG 360

Query: 1898 KRVEYTARTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGA 1719
            KRVEYT RTVISPDPNLKITEV IPIL+A++LT+PE VS++NIEKLR+CV NGP KYPGA
Sbjct: 361  KRVEYTGRTVISPDPNLKITEVAIPILMARILTFPECVSRHNIEKLRQCVRNGPYKYPGA 420

Query: 1718 NFVRLASGSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAK 1539
              VR   GS + L    RK  AD L  G  V+RHLEDGDVVLFNRQPSLHRMSIM HRA+
Sbjct: 421  RLVRYPDGSSRALVGDYRKRLADELTIGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRAR 480

Query: 1538 IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 1359
            IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILV
Sbjct: 481  IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILV 540

Query: 1358 ASTQDFLTSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFN 1179
            ASTQDFLTSSFLITR+DTFYDRA+FSL+CSYMGD MDAIDLPTPA++KP+ELWTGKQ+F 
Sbjct: 541  ASTQDFLTSSFLITRKDTFYDRATFSLICSYMGDGMDAIDLPTPAILKPIELWTGKQIFG 600

Query: 1178 VLIRPHAQMRVFVNLTVFEKSYIKGR---ETLCPNDGFVYFRNSELICGQLGKATLGNGN 1008
            VL+RP+A +RV+V LT+ EKS+ KG+   ET+CPNDG+VYFRNSELI GQLGKATLGNGN
Sbjct: 601  VLLRPNASVRVYVTLTLKEKSFKKGKLDEETMCPNDGWVYFRNSELISGQLGKATLGNGN 660

Query: 1007 KDGLFSVLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXX 828
            KDGL+SVLLRDY++HAAA+CMNRLAKLSARWIGNHGFSIGI DVQPGK L+         
Sbjct: 661  KDGLYSVLLRDYNSHAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKELNKKKSKTIME 720

Query: 827  XXXXXXKLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLI 648
                    I+ +  GKL+L+ G DAA++LEA+IT ILN IRE     CME LHWRNSPLI
Sbjct: 721  GYEECDATIQKFDEGKLQLKAGLDAAKSLEADITEILNRIREVTGKHCMEGLHWRNSPLI 780

Query: 647  MSQCGSKGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFY 468
            MSQCGSKGSP NI+QM+ACVGQQ+V G RA NGFIDRSLPHFPR S TP AKGFV NSFY
Sbjct: 781  MSQCGSKGSPINISQMVACVGQQTVNGHRAPNGFIDRSLPHFPRMSKTPAAKGFVANSFY 840

Query: 467  TGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQ 288
            +GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL +HYD+TVR+A+G ++Q
Sbjct: 841  SGLSATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNANGCILQ 900

Query: 287  FLYGDDGMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFS-LSPAEILELVVARLSKHD 111
            F YGDDGMDP+RMEGK+G PLN DRL++KV+ATCP   H + LS  E+ +     L++HD
Sbjct: 901  FTYGDDGMDPARMEGKNGAPLNFDRLFLKVQATCPPSPHHNYLSSQEVSQRFEEELTRHD 960

Query: 110  MTPEGGCSDAFKKSL 66
                G C++AF KSL
Sbjct: 961  --TGGVCTEAFVKSL 973


>ref|XP_008222562.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Prunus mume]
          Length = 1425

 Score = 1331 bits (3445), Expect = 0.0
 Identities = 662/968 (68%), Positives = 776/968 (80%), Gaps = 12/968 (1%)
 Frame = -3

Query: 2933 FTKQPYLEDVGPRKIKSIQFSMMSGTEIMKASELQVFNSGFYDQDRKPKKNALLDSRMGP 2754
            FTKQP++ED G RKI+  QFS MS TEI+  +E Q++   +YD ++KP +  LLD R+GP
Sbjct: 14   FTKQPFIEDEGHRKIEKWQFSTMSDTEIVNMAETQIYKCNYYDPNQKPIEGGLLDPRLGP 73

Query: 2753 ANKFI-TCATCHGSLTDCPGHYGYFHLILPVFNVGYFNAILNVLKCVCKSCARILLSERD 2577
            ANK    CATC   + DCPGH+G+  L LPV NVGY + I+++LKC+CK C+ ILL E  
Sbjct: 74   ANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTIVDILKCICKLCSGILLEEGM 133

Query: 2576 RISYLKKMRNPKLEALQKTGLAKAILNKC-------KPKKCSRCGYINGVVKKSGTVMGI 2418
            R  +LKKMR+PK+E L+KT L K I+ KC       +P KCS+CG+ING VKK+  V+GI
Sbjct: 134  RNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCSKCGFINGSVKKAVGVLGI 193

Query: 2417 VHDRSKLMDGVSEECEVAISKTKDSRTSSFTVVYVLNPVRVLGLFRRILDQDCDLLYLSD 2238
            +HDRSKL +GV ++    +S TK+S+ S     ++LNP R+  LF+R++D+DC+LL LS+
Sbjct: 194  IHDRSKL-NGVMDDFRTTLSHTKESKASFNVATHMLNPARIYSLFKRMVDEDCELLNLSN 252

Query: 2237 RPEKLIITDILVPPIAIRPSAFVDGGKTSNEDDITSKLNTIIQANTSLRQDLHCTSPTSK 2058
            RPE LI+ +I VPPIAIRPS  VD    SNE+DIT +L  IIQ+N  LR+DL       K
Sbjct: 253  RPENLIMKNIAVPPIAIRPSVIVDRS-LSNENDITERLKRIIQSNAILRRDLLEAKSAPK 311

Query: 2057 CLVAWELLQVEVAQYINSDVRGVPLSMQSSKPLRGFIQRLKGKQGRFRGNLSGKRVEYTA 1878
            CL +W++LQVEVAQYINSD+RGVP SMQ++KPL GF+QRLKGK GRFRGNLSGKRVEYT 
Sbjct: 312  CLASWDILQVEVAQYINSDIRGVPFSMQTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYTG 371

Query: 1877 RTVISPDPNLKITEVGIPILIAQVLTYPELVSQYNIEKLRKCVANGPQKYPGANFVRLAS 1698
            RTVISPDPNLKITEVGIPI +AQ+LTYPE VS +NIEKLR+CV+NGP KYPGA  +R   
Sbjct: 372  RTVISPDPNLKITEVGIPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRNPD 431

Query: 1697 GSLQNLRYGRRKGYADALKYGDTVERHLEDGDVVLFNRQPSLHRMSIMSHRAKIMPWRTL 1518
            G+  +L+  R K  AD LKYGD VERHLEDGD+VLFNRQPSLHRMSIM HRAK+MPWRTL
Sbjct: 432  GTEWSLKVNR-KNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRAKVMPWRTL 490

Query: 1517 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 1338
            RFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGE+LVASTQDFL
Sbjct: 491  RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVLLMGVQNNLCTPKNGEVLVASTQDFL 550

Query: 1337 TSSFLITRRDTFYDRASFSLMCSYMGDAMDAIDLPTPALIKPVELWTGKQLFNVLIRPHA 1158
            TSSFLITR+DTFYDRASFSLMCSYMGD  D +DLPTPA+IKP+ELWTGKQLF+VL+RP++
Sbjct: 551  TSSFLITRKDTFYDRASFSLMCSYMGDGTDPVDLPTPAVIKPIELWTGKQLFSVLVRPNS 610

Query: 1157 QMRVFVNLTVFEKSYIK----GRETLCPNDGFVYFRNSELICGQLGKATLGNGNKDGLFS 990
             +RV++N TV EKSY K    G E +CPNDGFVYFRNSELI GQLGK TLGNGNKDGL+S
Sbjct: 611  NVRVYLNFTVNEKSYSKTEDGGPEAMCPNDGFVYFRNSELIAGQLGKGTLGNGNKDGLYS 670

Query: 989  VLLRDYDAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPGKSLSXXXXXXXXXXXXXXX 810
            VLLRDY AHAAASCMNRLAKLSARWIGNHGFSIGISDVQP  +L                
Sbjct: 671  VLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGISDVQPSDNLYNEKEKIIKEGYNKCA 730

Query: 809  KLIEHYKTGKLELQPGCDAAQTLEAEITGILNNIREKAATVCMENLHWRNSPLIMSQCGS 630
              I+ Y  G+L L+PGCDAAQ+LE+ IT ILNNIR++   +CM+ LHWRNSPLIMSQCGS
Sbjct: 731  GKIKLYNEGQLPLEPGCDAAQSLESGITKILNNIRDQTGKLCMQTLHWRNSPLIMSQCGS 790

Query: 629  KGSPSNITQMIACVGQQSVGGRRAMNGFIDRSLPHFPRNSVTPDAKGFVENSFYTGLTAT 450
            KGSP NI+QMIACVGQQSVGGRRA NGFIDRSLPHFPR + TP AKGFV +SFY+GLTAT
Sbjct: 791  KGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKGFVASSFYSGLTAT 850

Query: 449  EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSTVRSASGGVVQFLYGDD 270
            EFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD+TVR+ASG +VQF YGDD
Sbjct: 851  EFFFHTMGGREGLVDTAVKTADTGYMSRRLSKILEDLSVQYDNTVRNASGCIVQFCYGDD 910

Query: 269  GMDPSRMEGKDGTPLNLDRLYMKVKATCPARGHFSLSPAEILELVVARLSKHDMTPEGGC 90
            GMDP+ MEG+ G PL+  RL++K KATCPA  + SLS  E+ E+V  RLSK DMTP+ GC
Sbjct: 911  GMDPAMMEGEGGAPLDFRRLFLKAKATCPAGENESLSLEEVSEIVKDRLSKQDMTPDRGC 970

Query: 89   SDAFKKSL 66
            S  FK SL
Sbjct: 971  SAGFKSSL 978