BLASTX nr result
ID: Papaver31_contig00005626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00005626
(1118 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 362 e-126
ref|XP_010662045.1| PREDICTED: RNA polymerase sigma factor sigA ... 362 e-126
ref|XP_010662046.1| PREDICTED: RNA polymerase sigma factor sigA ... 362 e-126
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin... 353 e-123
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-... 353 e-123
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr... 352 e-123
ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA ... 358 e-123
ref|XP_008376946.1| PREDICTED: RNA polymerase sigma factor sigA-... 358 e-123
ref|XP_009361126.1| PREDICTED: RNA polymerase sigma factor sigA ... 358 e-123
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ... 358 e-122
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun... 358 e-122
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g... 352 e-122
gb|AKC88633.1| sigma factor [Melianthus villosus] 354 e-121
ref|XP_010511140.1| PREDICTED: RNA polymerase sigma factor sigA ... 346 e-121
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps... 347 e-121
ref|XP_010414870.1| PREDICTED: RNA polymerase sigma factor sigA-... 346 e-121
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr... 346 e-121
ref|XP_008382369.1| PREDICTED: RNA polymerase sigma factor sigA-... 353 e-121
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 346 e-121
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali... 345 e-120
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 362 bits (929), Expect(2) = e-126
Identities = 181/212 (85%), Positives = 201/212 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH +VV LS KIKAGL LEDHK+RLKER+G EP+DEQ+A S+R+ R ELQ+ L+
Sbjct: 248 VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLI 307
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 308 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 367
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKIRLEE GITPS+DRIAECLNMS+
Sbjct: 368 VYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMSQ 427
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGETL 483
KK+ NATEA+SK+FSLDREAFPS+NGLPGETL
Sbjct: 428 KKVRNATEAISKVFSLDREAFPSLNGLPGETL 459
Score = 118 bits (295), Expect(2) = e-126
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLKNAARK ++
Sbjct: 489 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 548
Query: 279 EAMLVKH 259
EAMLVK+
Sbjct: 549 EAMLVKY 555
>ref|XP_010662045.1| PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Vitis
vinifera]
Length = 513
Score = 362 bits (929), Expect(2) = e-126
Identities = 181/212 (85%), Positives = 201/212 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH +VV LS KIKAGL LEDHK+RLKER+G EP+DEQ+A S+R+ R ELQ+ L+
Sbjct: 206 VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLI 265
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 266 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 325
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKIRLEE GITPS+DRIAECLNMS+
Sbjct: 326 VYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMSQ 385
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGETL 483
KK+ NATEA+SK+FSLDREAFPS+NGLPGETL
Sbjct: 386 KKVRNATEAISKVFSLDREAFPSLNGLPGETL 417
Score = 118 bits (295), Expect(2) = e-126
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLKNAARK ++
Sbjct: 447 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 506
Query: 279 EAMLVKH 259
EAMLVK+
Sbjct: 507 EAMLVKY 513
>ref|XP_010662046.1| PREDICTED: RNA polymerase sigma factor sigA isoform X2 [Vitis
vinifera]
Length = 507
Score = 362 bits (929), Expect(2) = e-126
Identities = 181/212 (85%), Positives = 201/212 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH +VV LS KIKAGL LEDHK+RLKER+G EP+DEQ+A S+R+ R ELQ+ L+
Sbjct: 200 VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLI 259
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 260 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 319
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKIRLEE GITPS+DRIAECLNMS+
Sbjct: 320 VYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMSQ 379
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGETL 483
KK+ NATEA+SK+FSLDREAFPS+NGLPGETL
Sbjct: 380 KKVRNATEAISKVFSLDREAFPSLNGLPGETL 411
Score = 118 bits (295), Expect(2) = e-126
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLKNAARK ++
Sbjct: 441 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 500
Query: 279 EAMLVKH 259
EAMLVK+
Sbjct: 501 EAMLVKY 507
>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
gi|641828897|gb|KDO48033.1| hypothetical protein
CISIN_1g010521mg [Citrus sinensis]
Length = 508
Score = 353 bits (907), Expect(2) = e-123
Identities = 177/211 (83%), Positives = 195/211 (92%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH EVV LS KIK GLSL+DHK RLKERLG EPS EQLA S+RI R ELQ++LM
Sbjct: 201 VSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILM 260
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKL MSNVRLVMSIAQ+YD+MGA++ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 261 ECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTY 320
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAK+RLEE G+TPSVDRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQ 380
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+ K+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAIGKVFSLDREAFPSLNGLPGET 411
Score = 118 bits (296), Expect(2) = e-123
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 IIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501
Query: 279 EAMLVKH 259
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
polymerase sigma factor sigA-like isoform X2 [Citrus
sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
polymerase sigma factor sigA-like isoform X3 [Citrus
sinensis]
Length = 508
Score = 353 bits (907), Expect(2) = e-123
Identities = 177/211 (83%), Positives = 195/211 (92%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH EVV LS KIK GLSL+DHK RLKERLG EPS EQLA S+RI R ELQ++LM
Sbjct: 201 VSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILM 260
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKL MSNVRLVMSIAQ+YD+MGA++ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 261 ECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTY 320
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAK+RLEE G+TPSVDRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQ 380
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+ K+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAIGKVFSLDREAFPSLNGLPGET 411
Score = 118 bits (296), Expect(2) = e-123
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 IIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501
Query: 279 EAMLVKH 259
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
gi|557539599|gb|ESR50643.1| hypothetical protein
CICLE_v10031289mg [Citrus clementina]
Length = 508
Score = 352 bits (903), Expect(2) = e-123
Identities = 175/211 (82%), Positives = 195/211 (92%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH EVV LS KIK GLSL+DHK RLKERLG EPS EQLA S+RI R ELQ++LM
Sbjct: 201 VSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILM 260
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKL MSNVRLVMSIAQ+YD+MGA++ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 261 ECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLIGLLRGIEKFDSSKGFKISTY 320
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAK+RLEE G+TP+VDRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQ 380
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+ K+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAIGKVFSLDREAFPSLNGLPGET 411
Score = 118 bits (296), Expect(2) = e-123
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 IIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501
Query: 279 EAMLVKH 259
EAMLVKH
Sbjct: 502 EAMLVKH 508
>ref|XP_011075762.1| PREDICTED: RNA polymerase sigma factor sigA [Sesamum indicum]
Length = 505
Score = 358 bits (920), Expect(2) = e-123
Identities = 177/212 (83%), Positives = 200/212 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELLTH +VV LS KIKAGL LE+ K+RLKERLG+EPSDEQLATS+RI R LQ+ L+
Sbjct: 198 VSEELLTHAQVVQLSEKIKAGLLLEEQKSRLKERLGFEPSDEQLATSLRISRTNLQSKLI 257
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAR+KLAMSN+RLVMSIAQ+YD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 258 ECSLARDKLAMSNIRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 317
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERLSLIRNAK RLEE GITPS+DRIAECLNMS+
Sbjct: 318 VYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKARLEEKGITPSIDRIAECLNMSQ 377
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGETL 483
KK+ NATEA++K+FSLDREAFPS+NGLPGETL
Sbjct: 378 KKVKNATEAITKVFSLDREAFPSLNGLPGETL 409
Score = 112 bits (279), Expect(2) = e-123
Identities = 55/67 (82%), Positives = 62/67 (92%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ TL RE++IIRLYYGLD ECLTWEDISRRIGLSRERVRQVGLVALEKLK+AARKR+L
Sbjct: 439 INLTLREREREIIRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRL 498
Query: 279 EAMLVKH 259
+ MLV+H
Sbjct: 499 DTMLVQH 505
>ref|XP_008376946.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Malus
domestica]
Length = 515
Score = 358 bits (920), Expect(2) = e-123
Identities = 178/211 (84%), Positives = 200/211 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSDEQLATS+RI R EL++ L+
Sbjct: 208 LSEDLLTHTEVVRLSKKIKIGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAELKSKLI 267
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQKYD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 268 ECSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 327
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENS+TLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMSK
Sbjct: 328 VYWWIRQGVSRALVENSKTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSK 387
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+SK+FSLDR+AFPS+NGLPGET
Sbjct: 388 KKVRNATEAISKVFSLDRDAFPSLNGLPGET 418
Score = 111 bits (277), Expect(2) = e-123
Identities = 54/67 (80%), Positives = 62/67 (92%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ LG RE++IIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK ++
Sbjct: 449 INMMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKTEM 508
Query: 279 EAMLVKH 259
EA+LVKH
Sbjct: 509 EALLVKH 515
>ref|XP_009361126.1| PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Pyrus x
bretschneideri]
Length = 514
Score = 358 bits (920), Expect(2) = e-123
Identities = 178/211 (84%), Positives = 200/211 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSDEQLATS+RI R EL++ L+
Sbjct: 207 LSEDLLTHTEVVRLSKKIKIGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAELKSKLI 266
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQKYD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 267 ECSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 326
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENS+TLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMSK
Sbjct: 327 VYWWIRQGVSRALVENSKTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSK 386
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+SK+FSLDR+AFPS+NGLPGET
Sbjct: 387 KKVRNATEAISKVFSLDRDAFPSLNGLPGET 417
Score = 111 bits (277), Expect(2) = e-123
Identities = 54/67 (80%), Positives = 62/67 (92%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ LG RE++IIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK ++
Sbjct: 448 INMMLGEREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKTEM 507
Query: 279 EAMLVKH 259
EA+LVKH
Sbjct: 508 EALLVKH 514
>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
Length = 512
Score = 358 bits (918), Expect(2) = e-122
Identities = 177/211 (83%), Positives = 199/211 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSDEQLATS+RI R +LQ+ L+
Sbjct: 205 LSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLI 264
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 265 ECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 324
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMSK
Sbjct: 325 VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSK 384
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+SK+FSLDR+AFPS+NGLPGET
Sbjct: 385 KKVRNATEAISKVFSLDRDAFPSLNGLPGET 415
Score = 110 bits (275), Expect(2) = e-122
Identities = 53/67 (79%), Positives = 63/67 (94%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ LG RE++II+LYYGL+ ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKR++
Sbjct: 446 INMMLGEREREIIQLYYGLENECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREM 505
Query: 279 EAMLVKH 259
EAML+KH
Sbjct: 506 EAMLLKH 512
>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
gi|462415485|gb|EMJ20222.1| hypothetical protein
PRUPE_ppa004393mg [Prunus persica]
Length = 512
Score = 358 bits (918), Expect(2) = e-122
Identities = 177/211 (83%), Positives = 199/211 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSDEQLATS+RI R +LQ+ L+
Sbjct: 205 LSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLI 264
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 265 ECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 324
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMSK
Sbjct: 325 VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSK 384
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+SK+FSLDR+AFPS+NGLPGET
Sbjct: 385 KKVRNATEAISKVFSLDRDAFPSLNGLPGET 415
Score = 110 bits (275), Expect(2) = e-122
Identities = 53/67 (79%), Positives = 63/67 (94%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ LG RE++II+LYYGL+ ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKR++
Sbjct: 446 INMMLGEREKEIIQLYYGLENECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREM 505
Query: 279 EAMLVKH 259
EAML+KH
Sbjct: 506 EAMLLKH 512
>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
[Theobroma cacao]
Length = 508
Score = 352 bits (902), Expect(2) = e-122
Identities = 174/211 (82%), Positives = 199/211 (94%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VS+ELL+H EVV LS KIKAGLSLE+H+ RLKERLG EPSDEQLATS++I R EL++ L+
Sbjct: 201 VSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLI 260
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE++DL+QGGLIGLLRGIEKFDS+KG+KISTY
Sbjct: 261 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTY 320
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITP++DRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDRIAESLNMSQ 380
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 381 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 411
Score = 115 bits (288), Expect(2) = e-122
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ TLG RE++IIRLYYGLDKE LTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 ITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501
Query: 279 EAMLVKH 259
EAMLVKH
Sbjct: 502 EAMLVKH 508
>gb|AKC88633.1| sigma factor [Melianthus villosus]
Length = 506
Score = 354 bits (908), Expect(2) = e-121
Identities = 177/211 (83%), Positives = 196/211 (92%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSEELL+H EVVHLS KIK GLSLE+HK RLK+RLG EPSDEQLATS+RI R EL++ +
Sbjct: 199 VSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEPSDEQLATSLRISRAELRSKWI 258
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
E LAREKLAMSNVRLVMSIAQ+YD+MGAE++DLVQGGLIGLLRGIEKFDS KGFKISTY
Sbjct: 259 ESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSAKGFKISTY 318
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITPS++R+AECLNMSK
Sbjct: 319 VYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIERLAECLNMSK 378
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KKI NATEA+SK+FSLDREAFPS+NGLPGET
Sbjct: 379 KKIRNATEAISKVFSLDREAFPSLNGLPGET 409
Score = 110 bits (276), Expect(2) = e-121
Identities = 53/67 (79%), Positives = 62/67 (92%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I TLG RE++IIRLY+GLD ECLTWEDIS+RIGLSRERVRQVGLVA+EKLK+AAR++ +
Sbjct: 440 IEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRERVRQVGLVAMEKLKHAARRKHM 499
Query: 279 EAMLVKH 259
EAMLVKH
Sbjct: 500 EAMLVKH 506
>ref|XP_010511140.1| PREDICTED: RNA polymerase sigma factor sigA [Camelina sativa]
Length = 541
Score = 346 bits (887), Expect(2) = e-121
Identities = 170/211 (80%), Positives = 198/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE++L+H+EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 216 ISEDVLSHSEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRAELQAWLM 275
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLV+SIAQ+YD+MGAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 276 ECHLAREKLAMSNVRLVLSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 335
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 336 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 395
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 396 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 426
Score = 118 bits (295), Expect(2) = e-121
Identities = 58/69 (84%), Positives = 66/69 (95%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 457 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 516
Query: 279 EAMLVKH*F 253
EAM++K+ F
Sbjct: 517 EAMILKNCF 525
>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
gi|482570853|gb|EOA35041.1| hypothetical protein
CARUB_v10020145mg [Capsella rubella]
Length = 521
Score = 347 bits (891), Expect(2) = e-121
Identities = 171/211 (81%), Positives = 198/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE++L+HTEVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 214 ISEDVLSHTEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRAELQAWLM 273
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 274 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 333
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 334 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 393
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 394 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 424
Score = 116 bits (290), Expect(2) = e-121
Identities = 56/67 (83%), Positives = 65/67 (97%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 455 ITATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 514
Query: 279 EAMLVKH 259
EAM++K+
Sbjct: 515 EAMILKN 521
>ref|XP_010414870.1| PREDICTED: RNA polymerase sigma factor sigA-like [Camelina sativa]
gi|727478073|ref|XP_010414871.1| PREDICTED: RNA
polymerase sigma factor sigA-like [Camelina sativa]
Length = 519
Score = 346 bits (887), Expect(2) = e-121
Identities = 170/211 (80%), Positives = 198/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE++L+H+EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 212 ISEDVLSHSEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRAELQAWLM 271
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLV+SIAQ+YD+MGAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 272 ECHLAREKLAMSNVRLVLSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 331
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 332 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 391
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 392 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 422
Score = 117 bits (293), Expect(2) = e-121
Identities = 57/67 (85%), Positives = 65/67 (97%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 453 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 512
Query: 279 EAMLVKH 259
EAM++K+
Sbjct: 513 EAMILKN 519
>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
gi|557097090|gb|ESQ37598.1| hypothetical protein
EUTSA_v10002486mg [Eutrema salsugineum]
Length = 519
Score = 346 bits (887), Expect(2) = e-121
Identities = 172/211 (81%), Positives = 197/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
VSE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 212 VSEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRGELQAWLM 271
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD+MGAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 272 ECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 331
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 332 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 391
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 392 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 422
Score = 117 bits (293), Expect(2) = e-121
Identities = 57/67 (85%), Positives = 65/67 (97%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 453 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 512
Query: 279 EAMLVKH 259
EAM++K+
Sbjct: 513 EAMILKN 519
>ref|XP_008382369.1| PREDICTED: RNA polymerase sigma factor sigA-like [Malus domestica]
Length = 514
Score = 353 bits (906), Expect(2) = e-121
Identities = 175/211 (82%), Positives = 198/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSD+QLATS+RI R EL + L+
Sbjct: 207 LSEDLLTHTEVVRLSKKIKIGLSVEEHKSRLKERLGCEPSDKQLATSLRISRTELLSKLI 266
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
ECSLAREKLAMSNVRLVMSIAQKYD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 267 ECSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 326
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL+ENS+TLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMS+
Sbjct: 327 VYWWIRQGVSRALVENSKTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSR 386
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEA+ K+FSLDR+AFPS+NGLPGET
Sbjct: 387 KKVRNATEAIGKVFSLDRDAFPSLNGLPGET 417
Score = 110 bits (274), Expect(2) = e-121
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
I+ LG RE++IIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+ ARK ++
Sbjct: 448 INMMLGDREREIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKHGARKNEM 507
Query: 279 EAMLVKH 259
EA+LVKH
Sbjct: 508 EALLVKH 514
>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
1 [Arabidopsis lyrata subsp. lyrata]
Length = 503
Score = 346 bits (887), Expect(2) = e-121
Identities = 170/211 (80%), Positives = 197/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 196 ISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 255
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 256 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 315
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 316 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 375
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 376 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 406
Score = 117 bits (293), Expect(2) = e-121
Identities = 57/67 (85%), Positives = 65/67 (97%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 437 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 496
Query: 279 EAMLVKH 259
EAM++K+
Sbjct: 497 EAMILKN 503
>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
Length = 502
Score = 345 bits (886), Expect(2) = e-120
Identities = 169/211 (80%), Positives = 197/211 (93%)
Frame = -1
Query: 1118 VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 939
+SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 195 ISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 254
Query: 938 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 759
EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 255 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 314
Query: 758 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 579
VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 315 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 374
Query: 578 KKITNATEAVSKIFSLDREAFPSINGLPGET 486
KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 375 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 405
Score = 117 bits (293), Expect(2) = e-120
Identities = 57/67 (85%), Positives = 65/67 (97%)
Frame = -3
Query: 459 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 280
IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495
Query: 279 EAMLVKH 259
EAM++K+
Sbjct: 496 EAMILKN 502