BLASTX nr result
ID: Papaver31_contig00003241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver31_contig00003241
(403 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloro... 120 3e-25
ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloro... 119 7e-25
ref|XP_010262411.1| PREDICTED: 50S ribosomal protein L28, chloro... 119 1e-24
ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloro... 118 2e-24
ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloro... 116 7e-24
ref|XP_010469469.1| PREDICTED: 50S ribosomal protein L28, chloro... 115 1e-23
ref|XP_010509883.1| PREDICTED: 50S ribosomal protein L28, chloro... 115 1e-23
ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arab... 115 1e-23
ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Caps... 115 2e-23
ref|XP_008438484.1| PREDICTED: 50S ribosomal protein L28, chloro... 114 2e-23
ref|XP_004497992.1| PREDICTED: 50S ribosomal protein L28, chloro... 114 2e-23
gb|KFK31045.1| hypothetical protein AALP_AA6G061100 [Arabis alpina] 114 3e-23
ref|XP_012069884.1| PREDICTED: 50S ribosomal protein L28, chloro... 114 3e-23
ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana... 114 4e-23
ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutr... 113 5e-23
ref|XP_013467015.1| 50S ribosomal protein L28 [Medicago truncatu... 113 5e-23
ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arab... 113 5e-23
ref|XP_010457490.1| PREDICTED: 50S ribosomal protein L28, chloro... 112 8e-23
ref|XP_010483813.1| PREDICTED: 50S ribosomal protein L28, chloro... 112 8e-23
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro... 112 8e-23
>ref|XP_009795876.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
sylvestris]
Length = 151
Score = 120 bits (302), Expect = 3e-25
Identities = 56/80 (70%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAP-VQPVARRICPFTGKKANRANKVSFSNH 66
+L+F+TSQLSG+K+S+ FSS+ + + + P +QPVARRICPFTGKK+NRANKVS SNH
Sbjct: 37 ELSFVTSQLSGLKISSTHFSSSAAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSNH 96
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+R+WWEAG
Sbjct: 97 KTKKLQFVNLQYKRIWWEAG 116
>ref|XP_009630927.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nicotiana
tomentosiformis] gi|400992|sp|P30956.1|RK28_TOBAC
RecName: Full=50S ribosomal protein L28, chloroplastic;
AltName: Full=CL28; Flags: Precursor
gi|279656|pir||R5NT28 ribosomal protein L28 precursor,
chloroplast - tobacco gi|189096147|pdb|3BBO|Y Chain Y,
Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|20016|emb|CAA48211.1| ribosomal protein CL28
[Nicotiana tabacum]
Length = 151
Score = 119 bits (299), Expect = 7e-25
Identities = 55/80 (68%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAP-VQPVARRICPFTGKKANRANKVSFSNH 66
+L+F+TSQLSG+K+S+ F S+++ + + P +QPVARRICPFTGKK+NRANKVS SNH
Sbjct: 37 ELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSNH 96
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+R+WWEAG
Sbjct: 97 KTKKLQFVNLQYKRIWWEAG 116
>ref|XP_010262411.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Nelumbo
nucifera]
Length = 158
Score = 119 bits (297), Expect = 1e-24
Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 6/85 (7%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLST--GEFSSTNSATPISYAP----VQPVARRICPFTGKKANRANKV 81
DL FLTSQLSG+K++ G SSTN A IS P +QPVARR+CPFTGKKAN+ANKV
Sbjct: 39 DLGFLTSQLSGLKIANYPGFPSSTNHAKLISAPPRPFILQPVARRVCPFTGKKANKANKV 98
Query: 80 SFSNHKTKKLQFVNLQYRRVWWEAG 6
SFSNHKTKKLQFVNLQY+R+WWE G
Sbjct: 99 SFSNHKTKKLQFVNLQYKRIWWEGG 123
>ref|XP_006354458.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Solanum
tuberosum]
Length = 149
Score = 118 bits (296), Expect = 2e-24
Identities = 63/114 (55%), Positives = 74/114 (64%)
Frame = -3
Query: 347 MATAASGLMLSGLRFXXXXXXXXXXXXXXXXXXXSDLTFLTSQLSGIKLSTGEFSSTNSA 168
MAT +G+ L G S+L+FLTSQLSGIK+S+ SS S
Sbjct: 1 MATITAGISLRGPAVSGNRTFAVTKRALPKLKLSSELSFLTSQLSGIKISSTNLSSPASL 60
Query: 167 TPISYAPVQPVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYRRVWWEAG 6
+ +QPVARRICPFTGKK+NRANKVS SNHKTKKLQFVNLQY+R+WWE G
Sbjct: 61 SVPFKTALQPVARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEG 114
>ref|XP_004247753.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Solanum
lycopersicum]
Length = 149
Score = 116 bits (290), Expect = 7e-24
Identities = 61/114 (53%), Positives = 74/114 (64%)
Frame = -3
Query: 347 MATAASGLMLSGLRFXXXXXXXXXXXXXXXXXXXSDLTFLTSQLSGIKLSTGEFSSTNSA 168
MAT +G+ L G S+L+F+TSQLSGIK+S+ SS S
Sbjct: 1 MATITAGISLRGPVVGGYRTFAVTKRALPKVKFSSELSFVTSQLSGIKISSTHLSSPASL 60
Query: 167 TPISYAPVQPVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYRRVWWEAG 6
+ +QPVARR+CPFTGKK+NRANKVS SNHKTKKLQFVNLQY+R+WWE G
Sbjct: 61 SVPFKTALQPVARRVCPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEEG 114
>ref|XP_010469469.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 143
Score = 115 bits (289), Expect = 1e-23
Identities = 57/80 (71%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S T+ + S+ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 29 ELGFLTSQLSGVRISHSPSDVTSRISVPSFPGIQPIVARRICPFTGKKANRANKVSFSNH 88
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+RVWWEAG
Sbjct: 89 KTKKLQFVNLQYKRVWWEAG 108
>ref|XP_010509883.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Camelina
sativa] gi|727476096|ref|XP_010413860.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic [Camelina sativa]
Length = 143
Score = 115 bits (288), Expect = 1e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S N + S+ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 29 ELGFLTSQLSGVRISHSPSDVINRISVPSFPGIQPIVARRICPFTGKKANRANKVSFSNH 88
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+RVWWEAG
Sbjct: 89 KTKKLQFVNLQYKRVWWEAG 108
>ref|XP_002879453.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297325292|gb|EFH55712.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 115 bits (288), Expect = 1e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S N + S+ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 29 ELGFLTSQLSGVRISHAPSDVINRISVPSFPGIQPIVARRICPFTGKKANRANKVSFSNH 88
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+RVWWEAG
Sbjct: 89 KTKKLQFVNLQYKRVWWEAG 108
>ref|XP_006295121.1| hypothetical protein CARUB_v10024195mg [Capsella rubella]
gi|482563829|gb|EOA28019.1| hypothetical protein
CARUB_v10024195mg [Capsella rubella]
Length = 166
Score = 115 bits (287), Expect = 2e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S N + S+ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 52 ELGFLTSQLSGLRISHAPTDVINRISVPSFPGIQPIVARRICPFTGKKANRANKVSFSNH 111
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+RVWWEAG
Sbjct: 112 KTKKLQFVNLQYKRVWWEAG 131
>ref|XP_008438484.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Cucumis melo]
Length = 150
Score = 114 bits (286), Expect = 2e-23
Identities = 59/83 (71%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPV----QPVARRICPFTGKKANRANKVSF 75
DL FL SQLSGIK+S+ S S +PIS AP+ QP+ARRICPFTGKKAN+ N VSF
Sbjct: 35 DLGFLASQLSGIKISSNH--SLISPSPISPAPLRPSLQPIARRICPFTGKKANKKNLVSF 92
Query: 74 SNHKTKKLQFVNLQYRRVWWEAG 6
SNHKTKKLQFVNLQY++VWWEAG
Sbjct: 93 SNHKTKKLQFVNLQYKKVWWEAG 115
>ref|XP_004497992.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Cicer
arietinum]
Length = 145
Score = 114 bits (286), Expect = 2e-23
Identities = 59/79 (74%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = -3
Query: 239 LTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNHK 63
L FL SQLSG+K+S+ +S N T I +P QP VARR+CPFTGKKANRANKVSFSNHK
Sbjct: 34 LGFLNSQLSGLKISSQ--TSLNLPTRIVASPFQPIVARRVCPFTGKKANRANKVSFSNHK 91
Query: 62 TKKLQFVNLQYRRVWWEAG 6
TKKLQFVNLQY+RVWWEAG
Sbjct: 92 TKKLQFVNLQYKRVWWEAG 110
>gb|KFK31045.1| hypothetical protein AALP_AA6G061100 [Arabis alpina]
Length = 147
Score = 114 bits (285), Expect = 3e-23
Identities = 56/80 (70%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S G N + ++ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 33 ELGFLTSQLSGVRISHGPSDVINRISLPTFPGLQPIVARRICPFTGKKANRANKVSFSNH 92
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY++VWWEAG
Sbjct: 93 KTKKLQFVNLQYKKVWWEAG 112
>ref|XP_012069884.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Jatropha
curcas] gi|643733421|gb|KDP40368.1| hypothetical protein
JCGZ_02366 [Jatropha curcas]
Length = 149
Score = 114 bits (285), Expect = 3e-23
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQPV-ARRICPFTGKKANRANKVSFSNH 66
+L F+TSQLSGI++S A P S +QPV ARR+CPFTGKKANRANKVSFSNH
Sbjct: 38 ELGFVTSQLSGIRISN---DLPQRANPFSSPAIQPVVARRVCPFTGKKANRANKVSFSNH 94
Query: 65 KTKKLQFVNLQYRRVWWEAGN 3
KTKKLQFVNLQY++VWWEAGN
Sbjct: 95 KTKKLQFVNLQYKKVWWEAGN 115
>ref|NP_565765.1| 50S ribosomal protein L28 [Arabidopsis thaliana]
gi|21542433|sp|O22795.2|RK28_ARATH RecName: Full=50S
ribosomal protein L28, chloroplastic; AltName:
Full=CL28; Flags: Precursor gi|18252877|gb|AAL62365.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|20196843|gb|AAB80662.2|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21387067|gb|AAM47937.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|21592705|gb|AAM64654.1|
putative chloroplast 50S ribosomal protein L28
[Arabidopsis thaliana] gi|330253742|gb|AEC08836.1| 50S
ribosomal protein L28 [Arabidopsis thaliana]
Length = 143
Score = 114 bits (284), Expect = 4e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L FLTSQLSG+++S N + S+ +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 29 ELGFLTSQLSGLRISYTPSDVINRISLPSFPGIQPIVARRICPFTGKKANRANKVSFSNH 88
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY+RVWWEAG
Sbjct: 89 KTKKLQFVNLQYKRVWWEAG 108
>ref|XP_006410489.1| hypothetical protein EUTSA_v10017390mg [Eutrema salsugineum]
gi|557111658|gb|ESQ51942.1| hypothetical protein
EUTSA_v10017390mg [Eutrema salsugineum]
Length = 142
Score = 113 bits (283), Expect = 5e-23
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPI-SYAPVQP-VARRICPFTGKKANRANKVSFSN 69
+L FLTSQLSG+++S G S S + S+ +QP VARRICPFTGKKANRANKVSFSN
Sbjct: 27 ELGFLTSQLSGVRISHGPPSDVISRISVPSFPGLQPIVARRICPFTGKKANRANKVSFSN 86
Query: 68 HKTKKLQFVNLQYRRVWWEAG 6
HKTKKLQFVNLQY++VWWEAG
Sbjct: 87 HKTKKLQFVNLQYKKVWWEAG 107
>ref|XP_013467015.1| 50S ribosomal protein L28 [Medicago truncatula]
gi|388512623|gb|AFK44373.1| unknown [Medicago
truncatula] gi|657402123|gb|KEH41050.1| 50S ribosomal
protein L28 [Medicago truncatula]
Length = 146
Score = 113 bits (283), Expect = 5e-23
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = -3
Query: 239 LTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNHK 63
L FL SQLSG+K+S+ +S TPI +P QP VA+R+CPFTGKK+NRANKVSFSNHK
Sbjct: 35 LGFLNSQLSGLKISSQ--TSLKLPTPIVASPFQPIVAKRVCPFTGKKSNRANKVSFSNHK 92
Query: 62 TKKLQFVNLQYRRVWWEAG 6
TKKLQFVNLQY+RVWWEAG
Sbjct: 93 TKKLQFVNLQYKRVWWEAG 111
>ref|XP_002892218.1| 50S ribosomal protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata] gi|297338060|gb|EFH68477.1| 50S ribosomal
protein L28, chloroplast [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 113 bits (283), Expect = 5e-23
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 1/80 (1%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPVQP-VARRICPFTGKKANRANKVSFSNH 66
+L LTSQLSG+++S G + N T S +QP VARRICPFTGKKANRANKVSFSNH
Sbjct: 23 ELGSLTSQLSGVRISHGYSDAINRITLPSVPSLQPIVARRICPFTGKKANRANKVSFSNH 82
Query: 65 KTKKLQFVNLQYRRVWWEAG 6
KTKKLQFVNLQY++VWWEAG
Sbjct: 83 KTKKLQFVNLQYKKVWWEAG 102
>ref|XP_010457490.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727569961|ref|XP_010457491.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727569963|ref|XP_010457492.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 142
Score = 112 bits (281), Expect = 8e-23
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNS-ATPISYAPVQP-VARRICPFTGKKANRANKVSFSN 69
+L FLTSQLSG+++S G N A P + + +QP VARRICPFTGKKANRANKVSFSN
Sbjct: 27 ELGFLTSQLSGVRISYGYSDVINCIALPSAPSLLQPIVARRICPFTGKKANRANKVSFSN 86
Query: 68 HKTKKLQFVNLQYRRVWWEAG 6
HKTKKLQFVNLQY++VWWEAG
Sbjct: 87 HKTKKLQFVNLQYKKVWWEAG 107
>ref|XP_010483813.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Camelina
sativa] gi|727430296|ref|XP_010483822.1| PREDICTED: 50S
ribosomal protein L28, chloroplastic-like [Camelina
sativa]
Length = 142
Score = 112 bits (281), Expect = 8e-23
Identities = 58/81 (71%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNS-ATPISYAPVQP-VARRICPFTGKKANRANKVSFSN 69
+L FLTSQLSG+++S G N A P + + +QP VARRICPFTGKKANRANKVSFSN
Sbjct: 27 ELGFLTSQLSGVRISYGYSDVINRIALPSAPSLLQPIVARRICPFTGKKANRANKVSFSN 86
Query: 68 HKTKKLQFVNLQYRRVWWEAG 6
HKTKKLQFVNLQY++VWWEAG
Sbjct: 87 HKTKKLQFVNLQYKKVWWEAG 107
>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Cucumis
sativus] gi|700201700|gb|KGN56833.1| hypothetical
protein Csa_3G134810 [Cucumis sativus]
Length = 150
Score = 112 bits (281), Expect = 8e-23
Identities = 59/83 (71%), Positives = 66/83 (79%), Gaps = 4/83 (4%)
Frame = -3
Query: 242 DLTFLTSQLSGIKLSTGEFSSTNSATPISYAPV----QPVARRICPFTGKKANRANKVSF 75
DL FLTSQLSGI++S+ S S IS AP+ QPVARRICPFTGKKAN+ N VSF
Sbjct: 35 DLGFLTSQLSGIRISSNH--SLISPASISTAPLRPSLQPVARRICPFTGKKANKKNLVSF 92
Query: 74 SNHKTKKLQFVNLQYRRVWWEAG 6
SNHKTKKLQFVNLQY++VWWEAG
Sbjct: 93 SNHKTKKLQFVNLQYKKVWWEAG 115