BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver31_contig00003176
         (1685 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra...   637   e-180
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   635   e-179
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   616   e-173
gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   615   e-173
gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   615   e-173
gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sin...   615   e-173
ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II tra...   614   e-173
ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II tra...   614   e-173
ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II tra...   613   e-172
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   613   e-172
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra...   613   e-172
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   612   e-172
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...   612   e-172
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...   612   e-172
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              609   e-171
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   604   e-170
ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II tra...   599   e-168
ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   598   e-168
ref|XP_007046292.1| Phytochrome and flowering time regulatory pr...   595   e-167
ref|XP_010923574.1| PREDICTED: mediator of RNA polymerase II tra...   592   e-166

>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Nelumbo nucifera]
          Length = 809

 Score =  637 bits (1643), Expect = e-180
 Identities = 350/524 (66%), Positives = 406/524 (77%), Gaps = 6/524 (1%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSFAQC VSLSVISP+QLPKL+ IYNAGKRNPRAA+P++D +KNP  L+LLSE+FM
Sbjct: 170  ETVAKSFAQCFVSLSVISPKQLPKLKAIYNAGKRNPRAADPSVDNLKNPQFLILLSENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR GIT++ +NQGP+KMDT+SVP VSGP   SIP VNG +M+RQ IPVG+   A
Sbjct: 230  EARAALSRPGITSLTSNQGPVKMDTTSVPPVSGP-SASIPSVNGPLMTRQQIPVGNIPTA 288

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP T+ S      F + P V HG +Q +            QE I N DNVQEFKP+
Sbjct: 289  TVKVEPTTVSSMVTGPGFSNIPPVSHGATQAVPSLQTSSPIASSQEMIANADNVQEFKPI 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSANSMGLQTMGATPMAMHMSNMISSGMA 984
            +  +SQPLRP G AAANVNILNNLSQVR      +S+GLQT+GATPMAMHMSNMISSGMA
Sbjct: 349  VNPVSQPLRPPG-AAANVNILNNLSQVR-----GSSIGLQTVGATPMAMHMSNMISSGMA 402

Query: 983  STALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPNHGMSQ 804
            S+ L  AQ VFS GQS S T+L+GSG L+G  Q+ QNT +G  +SA SNIS N N G+SQ
Sbjct: 403  SSVLPAAQTVFSSGQS-SITSLTGSGSLMGTAQVTQNTAIGSLTSAASNISGNSNLGISQ 461

Query: 803  PMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGTMIPTP 624
            P+AN+QG VS+GQ    + QG+L+G QIGQ+                G+S+G+GTMIPTP
Sbjct: 462  PLANIQGAVSMGQPVPTVGQGNLSGTQIGQSGIGMNQNIMTGLGPS-GISSGAGTMIPTP 520

Query: 623  GVPQQVQAGIQPLNVANTSTANMPAQQTSGAMQSAPGPDKYVKVWEGALSGQRQGQPVFI 444
            G+ QQVQ G Q L V N S AN+  QQT+G +Q  P   +YVK+WEGALSGQRQGQPVFI
Sbjct: 521  GMSQQVQGGTQSLGVNNGSAANV--QQTAGTLQ--PSQSRYVKLWEGALSGQRQGQPVFI 576

Query: 443  TKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQHGFLGQL 264
            T+LEGYR+ +ASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRALNQHGFLGQL
Sbjct: 577  TRLEGYRNVTASETLASDWPPTMQIVRLISQDHMNNKQYVGKADFLVFRALNQHGFLGQL 636

Query: 263  QEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQPP 132
            Q+KKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ P
Sbjct: 637  QDKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIP 680


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            [Vitis vinifera]
          Length = 827

 Score =  635 bits (1637), Expect = e-179
 Identities = 349/528 (66%), Positives = 408/528 (77%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            E VAKSFAQCSVSLSVI P+QLPKL+ IYNAGKRNPR A+P +D VKNP+ LVL+S+ FM
Sbjct: 170  EAVAKSFAQCSVSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G++NM ANQ P+KMD +SVP VS   P SIP VNG +M+R +I VG+   A
Sbjct: 230  EARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTA 288

Query: 1328 TVKVEPNTIPS----SAFPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSVP   SQG+            QE I+N DNVQ+ KP+
Sbjct: 289  TVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPI 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQ LRP  PAAANV+ILNNLSQ RQ M+SA      S+GLQ+MG T MAMHMSNMI
Sbjct: 349  VSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +   Q VFS GQS  ++ ++GSG L G  Q+AQN+ LG F+SATSN+SVN N
Sbjct: 409  SSGMASS-VPATQTVFSSGQSAVSS-ITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             G+SQP++NLQG VS+GQ+  G++QG+L GGQ+ Q+                G+S+G+GT
Sbjct: 467  LGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPS-GISSGTGT 525

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMPA-QQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQVQ G+  L V N + ANMP  QQTSGAMQ+A    KYVKVWEG LSGQRQ
Sbjct: 526  MIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQS--KYVKVWEGNLSGQRQ 583

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYRSASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 584  GQPVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 643

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 644  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 691


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
            [Theobroma cacao] gi|508710226|gb|EOY02123.1| Phytochrome
            and flowering time regulatory protein isoform 1
            [Theobroma cacao]
          Length = 871

 Score =  616 bits (1589), Expect = e-173
 Identities = 343/528 (64%), Positives = 401/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSFAQCSVSLSVI P+QL KL+ IY+AGKRNPRA +P +D V+NP  LVL+SE+FM
Sbjct: 170  ETVAKSFAQCSVSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E RAALSR G+ ++ +NQ P+KMD +SV S +GP PTS+P VNGSMMSRQ + VG+   A
Sbjct: 230  EGRAALSRPGVPSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTA 289

Query: 1328 TVKVEPNTIPSS----AFPHPPSVPHGPSQGIXXXXXXXXXXXXQEITNN-DNVQEFKPM 1164
            T+KVEP TI S     AFPH P+VP  PS  I            QE+ N+ DNVQE KP 
Sbjct: 290  TIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPS 349

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G++QPLRP  P AANVNILNNLSQ R  MNSA      S+GL +MG TP+AMHMSNMI
Sbjct: 350  VSGMTQPLRPV-PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPVAMHMSNMI 407

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ + PAQ VFS GQS   T+L+GSG L G  Q+  N+ L  F+SATSN++ N N
Sbjct: 408  SSGMASS-VPPAQTVFSSGQS-CMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSN 465

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             GMSQPM N+Q  VS+GQS  G++QG+ +G Q+ Q+                 VS+G+GT
Sbjct: 466  IGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPST--VSSGTGT 523

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            M P PG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG LSGQRQ
Sbjct: 524  MFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQRQ 581

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 582  GQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 641

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 642  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 689


>gb|KDO70070.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 818

 Score =  615 bits (1587), Expect = e-173
 Identities = 343/528 (64%), Positives = 399/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QLPKL  IYNA KRNPRAA+P +D  KNP+ LVL+SE+FM
Sbjct: 154  ETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFM 213

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G+ N+  NQ P+KMD + V SV+GP PTSIP VNG  ++R  I VG+   A
Sbjct: 214  EARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTA 271

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSVP   SQG+            QE IT+ D+V E KP+
Sbjct: 272  TVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPL 331

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPMAMHMSNMI
Sbjct: 332  VSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 391

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  +Q VFS  QSG  T++ GSG L G +Q+ QN+ L  F+SA SN+S N N
Sbjct: 392  SSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 449

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
              +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q                 GVS+G+GT
Sbjct: 450  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQ-NGISMNQNMMSGLGPSGVSSGTGT 507

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQ Q+G+QPL+V N +  NM  +QQTS A+ S+    KYVKVWEG+LSGQRQ
Sbjct: 508  MIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWEGSLSGQRQ 565

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 566  GQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 625

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 626  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 673


>gb|KDO70069.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 834

 Score =  615 bits (1587), Expect = e-173
 Identities = 343/528 (64%), Positives = 399/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QLPKL  IYNA KRNPRAA+P +D  KNP+ LVL+SE+FM
Sbjct: 170  ETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G+ N+  NQ P+KMD + V SV+GP PTSIP VNG  ++R  I VG+   A
Sbjct: 230  EARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTA 287

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSVP   SQG+            QE IT+ D+V E KP+
Sbjct: 288  TVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPL 347

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPMAMHMSNMI
Sbjct: 348  VSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 407

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  +Q VFS  QSG  T++ GSG L G +Q+ QN+ L  F+SA SN+S N N
Sbjct: 408  SSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 465

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
              +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q                 GVS+G+GT
Sbjct: 466  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQ-NGISMNQNMMSGLGPSGVSSGTGT 523

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQ Q+G+QPL+V N +  NM  +QQTS A+ S+    KYVKVWEG+LSGQRQ
Sbjct: 524  MIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWEGSLSGQRQ 581

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 582  GQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 641

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 642  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 689


>gb|KDO70068.1| hypothetical protein CISIN_1g003284mg [Citrus sinensis]
          Length = 833

 Score =  615 bits (1587), Expect = e-173
 Identities = 343/528 (64%), Positives = 399/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QLPKL  IYNA KRNPRAA+P +D  KNP+ LVL+SE+FM
Sbjct: 169  ETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFM 228

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G+ N+  NQ P+KMD + V SV+GP PTSIP VNG  ++R  I VG+   A
Sbjct: 229  EARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTA 286

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSVP   SQG+            QE IT+ D+V E KP+
Sbjct: 287  TVKVEPSTVTSMVNGPTFPHIPSVPRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPL 346

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPMAMHMSNMI
Sbjct: 347  VSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 406

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  +Q VFS  QSG  T++ GSG L G +Q+ QN+ L  F+SA SN+S N N
Sbjct: 407  SSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 464

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
              +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q                 GVS+G+GT
Sbjct: 465  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQ-NGISMNQNMMSGLGPSGVSSGTGT 522

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQ Q+G+QPL+V N +  NM  +QQTS A+ S+    KYVKVWEG+LSGQRQ
Sbjct: 523  MIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWEGSLSGQRQ 580

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 581  GQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 640

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 641  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 688


>ref|XP_012082045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Jatropha curcas]
          Length = 720

 Score =  614 bits (1583), Expect = e-173
 Identities = 341/531 (64%), Positives = 403/531 (75%), Gaps = 12/531 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KLR IYNAGKRN R A+P +D VKNP+ LVL+SE+FM
Sbjct: 170  ETVAKSFPQCSVSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EAR AL+R G++N+ ANQ P+KMD SSVPSV+GP P SI  VNGS+M+R  I VG+   A
Sbjct: 230  EARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPTA 289

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKPM 1164
            TVK+EP T+ S A    F H PS     +Q +            QE+ TN +NV E KP 
Sbjct: 290  TVKIEPTTVTSMAPGPVFSHIPSA-RPATQAVPSLQTSSPPTTSQEMMTNGENVPELKPT 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+ Q +RP  P AANV+ILNNLSQ RQ MNSA     +S+ L +M  TP+AMHMSNMI
Sbjct: 349  VSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPVAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMA T++  AQ VFS GQ G  T+++GSG L G +QIA N+ LG F+S+TSNIS N N
Sbjct: 409  SSGMA-TSVPAAQTVFSSGQPGI-TSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             G+SQPMANLQG VS+GQS +G++QG+L+GGQ+ Q+                GVS+G+ T
Sbjct: 467  LGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPS-GVSSGTST 525

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+PQQ Q G+Q L V N S ANMP +QQT+ A+QSA    KYVKVWEG LSGQRQ
Sbjct: 526  MIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQS--KYVKVWEGNLSGQRQ 583

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYR+ASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA++QH
Sbjct: 584  GQPVFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQH 643

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQPPT 129
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ P+
Sbjct: 644  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 694


>ref|XP_012082044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Jatropha curcas]
          Length = 842

 Score =  614 bits (1583), Expect = e-173
 Identities = 341/531 (64%), Positives = 403/531 (75%), Gaps = 12/531 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KLR IYNAGKRN R A+P +D VKNP+ LVL+SE+FM
Sbjct: 170  ETVAKSFPQCSVSLSVICPKQLLKLRAIYNAGKRNTRVADPTVDNVKNPHFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EAR AL+R G++N+ ANQ P+KMD SSVPSV+GP P SI  VNGS+M+R  I VG+   A
Sbjct: 230  EARTALTRPGVSNLSANQSPVKMDVSSVPSVAGPPPPSISSVNGSIMNRPPISVGNVPTA 289

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKPM 1164
            TVK+EP T+ S A    F H PS     +Q +            QE+ TN +NV E KP 
Sbjct: 290  TVKIEPTTVTSMAPGPVFSHIPSA-RPATQAVPSLQTSSPPTTSQEMMTNGENVPELKPT 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+ Q +RP  P AANV+ILNNLSQ RQ MNSA     +S+ L +M  TP+AMHMSNMI
Sbjct: 349  VSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPSMNQTPVAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMA T++  AQ VFS GQ G  T+++GSG L G +QIA N+ LG F+S+TSNIS N N
Sbjct: 409  SSGMA-TSVPAAQTVFSSGQPGI-TSMTGSGTLTGTSQIAPNSGLGSFASSTSNISGNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             G+SQPMANLQG VS+GQS +G++QG+L+GGQ+ Q+                GVS+G+ T
Sbjct: 467  LGISQPMANLQGGVSMGQSVSGMSQGNLSGGQMVQSVIGMNQNVMNGLGPS-GVSSGTST 525

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+PQQ Q G+Q L V N S ANMP +QQT+ A+QSA    KYVKVWEG LSGQRQ
Sbjct: 526  MIPTPGMPQQAQTGMQSLGVNNNSAANMPLSQQTTSALQSAQS--KYVKVWEGNLSGQRQ 583

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYR+ASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA++QH
Sbjct: 584  GQPVFITRLEGYRNASASESLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMDQH 643

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQPPT 129
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ P+
Sbjct: 644  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPS 694


>ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X3 [Gossypium raimondii]
          Length = 726

 Score =  613 bits (1580), Expect = e-172
 Identities = 339/529 (64%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KL+ IY+AGKRNPRA++P +D V+NP  LVL+SE+FM
Sbjct: 62   ETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFM 121

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E  AALSRSG+ ++  NQ P+KMD +SV +V+G  PTS+P VNGS+MSRQ +  G+   A
Sbjct: 122  EGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTA 181

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEIT-NNDNVQEFKPM 1164
            TVKVEP TI S A    FPH PSVP  P Q +            +E+  ++DNVQE KP 
Sbjct: 182  TVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPS 241

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            +GG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+AMHMSNMI
Sbjct: 242  VGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPVAMHMSNMI 300

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGM S+ +  AQ VFS GQSG  T+L GSG + G TQ+  N+ L  F+SATSN++ N N
Sbjct: 301  SSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSN 358

Query: 818  HGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q                  VS+G+G
Sbjct: 359  IGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPST--VSSGTG 416

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQR 465
            T+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVWEG LSGQR
Sbjct: 417  TLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQR 474

Query: 464  QGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQ 285
            QGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQ
Sbjct: 475  QGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQ 534

Query: 284  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            HGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 535  HGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 583


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  613 bits (1580), Expect = e-172
 Identities = 339/529 (64%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KL+ IY+AGKRNPRA++P +D V+NP  LVL+SE+FM
Sbjct: 176  ETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFM 235

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E  AALSRSG+ ++  NQ P+KMD +SV +V+G  PTS+P VNGS+MSRQ +  G+   A
Sbjct: 236  EGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTA 295

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEIT-NNDNVQEFKPM 1164
            TVKVEP TI S A    FPH PSVP  P Q +            +E+  ++DNVQE KP 
Sbjct: 296  TVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPS 355

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            +GG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+AMHMSNMI
Sbjct: 356  VGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPVAMHMSNMI 414

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGM S+ +  AQ VFS GQSG  T+L GSG + G TQ+  N+ L  F+SATSN++ N N
Sbjct: 415  SSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSN 472

Query: 818  HGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q                  VS+G+G
Sbjct: 473  IGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPST--VSSGTG 530

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQR 465
            T+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVWEG LSGQR
Sbjct: 531  TLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQR 588

Query: 464  QGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQ 285
            QGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQ
Sbjct: 589  QGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQ 648

Query: 284  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            HGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 649  HGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 697


>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X2 [Gossypium raimondii]
            gi|763763083|gb|KJB30337.1| hypothetical protein
            B456_005G138200 [Gossypium raimondii]
          Length = 834

 Score =  613 bits (1580), Expect = e-172
 Identities = 339/529 (64%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KL+ IY+AGKRNPRA++P +D V+NP  LVL+SE+FM
Sbjct: 170  ETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E  AALSRSG+ ++  NQ P+KMD +SV +V+G  PTS+P VNGS+MSRQ +  G+   A
Sbjct: 230  EGCAALSRSGVPSLAPNQSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTA 289

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEIT-NNDNVQEFKPM 1164
            TVKVEP TI S A    FPH PSVP  P Q +            +E+  ++DNVQE KP 
Sbjct: 290  TVKVEPTTITSMANGPAFPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKPS 349

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            +GG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+AMHMSNMI
Sbjct: 350  VGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPVAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGM S+ +  AQ VFS GQSG  T+L GSG + G TQ+  N+ L  F+SATSN++ N N
Sbjct: 409  SSGMTSS-VPLAQTVFSSGQSGM-TSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G+SQPM N+QG VS+GQS  G ++QG+ +G Q+ Q                  VS+G+G
Sbjct: 467  IGISQPMCNVQGAVSMGQSVPGSMSQGNHSGAQLVQTGVAMSQSMSGLGPST--VSSGTG 524

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQR 465
            T+IP PG+ QQVQ+G+Q L V N S A+MP +QQTS A+QSA    KYVKVWEG LSGQR
Sbjct: 525  TLIPAPGMSQQVQSGMQTLGVNNNSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQR 582

Query: 464  QGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQ 285
            QGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQ
Sbjct: 583  QGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQ 642

Query: 284  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            HGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 643  HGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 691


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
            arboreum]
          Length = 828

 Score =  612 bits (1579), Expect = e-172
 Identities = 339/529 (64%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QL KL+ IY+AGKRNPRA++P +D V+NP  LVL+SE+FM
Sbjct: 170  ETVAKSFPQCSVSLSVICPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E  AALSRSG+ ++  NQ P+KMD +SV SV+G  PTS+P VNGS+MSRQ + VG+   A
Sbjct: 230  EGCAALSRSGVPSLAPNQSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPVSVGNVPTA 289

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEIT-NNDNVQEFKPM 1164
            TVKVEP TI S A    FPH PSVP  P Q +            +E+  ++DNVQE KP 
Sbjct: 290  TVKVEPATITSMANGPAFPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKPS 349

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            +GG++QPLRP  PAAANVNILNNLSQ R  MNSA      S+GLQ+MG TP+AMHMSNMI
Sbjct: 350  VGGMTQPLRPVPPAAANVNILNNLSQAR-VMNSAALSGGTSIGLQSMGQTPVAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGM S+ +  AQ VFS GQS   T+L GSG + G TQ+  N+ L  F+SATSN++ N N
Sbjct: 409  SSGMTSS-VPLAQTVFSSGQSAM-TSLPGSGAVTGTTQVPPNSNLNSFASATSNVAGNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAG-INQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G+SQPM N+QG VS+GQS  G ++ G+ +G Q+ Q                  VS+G+G
Sbjct: 467  IGISQPMCNVQGAVSMGQSVPGSMSHGNHSGAQLVQTGVAMSQSMSGLGPST--VSSGTG 524

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQR 465
            T+IPTPG+ QQVQ+G+Q + V N S A+MP +QQTS A+QSA    KYVKVWEG LSGQR
Sbjct: 525  TLIPTPGLSQQVQSGMQTIGVNNNSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQR 582

Query: 464  QGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQ 285
            QGQPVFIT+LEGYRSASASETLA+DWP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQ
Sbjct: 583  QGQPVFITRLEGYRSASASETLASDWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQ 642

Query: 284  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            HGFLGQLQEKKLCAVIQLPSQTL+LSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 643  HGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 691


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score =  612 bits (1579), Expect = e-172
 Identities = 342/528 (64%), Positives = 398/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QLPKL  IYNA KRNPRAA+P +D  KNP+ LVL+SE+FM
Sbjct: 169  ETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFM 228

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G+ N+  NQ P+KMD + V SV+GP PTSIP VNG  ++R  I VG+   A
Sbjct: 229  EARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTA 286

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSV    SQG+            QE IT+ D+V E KP+
Sbjct: 287  TVKVEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPL 346

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPMAMHMSNMI
Sbjct: 347  VSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 406

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  +Q VFS  QSG  T++ GSG L G +Q+ QN+ L  F+SA SN+S N N
Sbjct: 407  SSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 464

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
              +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q                 GVS+G+GT
Sbjct: 465  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQ-NGISMNQNMMSGLGPSGVSSGTGT 522

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQ Q+G+QPL+V N +  NM  +QQTS A+ S+    KYVKVWEG+LSGQRQ
Sbjct: 523  MIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWEGSLSGQRQ 580

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 581  GQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 640

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 641  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 688


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
            gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 25-like isoform
            X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
            hypothetical protein CICLE_v10030710mg [Citrus
            clementina]
          Length = 830

 Score =  612 bits (1579), Expect = e-172
 Identities = 342/528 (64%), Positives = 398/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLSVI P+QLPKL  IYNA KRNPRAA+P +D  KNP+ LVL+SE+FM
Sbjct: 170  ETVAKSFVQCSVSLSVICPKQLPKLTAIYNAAKRNPRAADPPVDNSKNPHFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G+ N+  NQ P+KMD + V SV+GP PTSIP VNG  ++R  I VG+   A
Sbjct: 230  EARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG--INRPPISVGNVPTA 287

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSV    SQG+            QE IT+ D+V E KP+
Sbjct: 288  TVKVEPSTVTSMVNGPTFPHIPSVSRPASQGVPSLQTSSPSSTSQEMITSGDSVPEVKPL 347

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQPLRP  PAAANVNILNNLSQ RQ MN+A      S+GLQ+MG TPMAMHMSNMI
Sbjct: 348  VSGMSQPLRPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 407

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  +Q VFS  QSG  T++ GSG L G +Q+ QN+ L  F+SA SN+S N N
Sbjct: 408  SSGMASS-VPTSQPVFSSAQSGI-TSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSN 465

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
              +SQPM  LQG  S+GQS  G++QG+ +GGQ+ Q                 GVS+G+GT
Sbjct: 466  PSISQPMGTLQGGASMGQSV-GMSQGNHSGGQMVQ-NGISMNQNMMSGLGPSGVSSGTGT 523

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQ Q+G+QPL+V N +  NM  +QQTS A+ S+    KYVKVWEG+LSGQRQ
Sbjct: 524  MIPTPGMSQQAQSGMQPLSVNNNTAVNMQLSQQTSSALHSSQS--KYVKVWEGSLSGQRQ 581

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFITKLEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 582  GQPVFITKLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 641

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 642  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 689


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  609 bits (1571), Expect = e-171
 Identities = 341/528 (64%), Positives = 397/528 (75%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            E VAKSFAQCSVSLSVI P+QLPKL+ IYNAGKRNPR A+P +D VKNP+ LVL+S+ FM
Sbjct: 170  EAVAKSFAQCSVSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR G++NM ANQ P+KMD +SVP VS   P SIP VNG +M+R +I VG+   A
Sbjct: 230  EARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTA 288

Query: 1328 TVKVEPNTIPS----SAFPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP+T+ S      FPH PSVP   SQG+            QE I+N DNVQ+ KP+
Sbjct: 289  TVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPI 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G+SQ LRP  PAAANV+ILNNLSQ RQ M+SA      S+GLQ+MG T MAMHMSNMI
Sbjct: 349  VSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMI 408

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +   Q VFS GQS  ++ ++GSG L G  Q+AQN+ LG F+SATSN+SVN N
Sbjct: 409  SSGMASS-VPATQTVFSSGQSAVSS-ITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSN 466

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             G+SQP+              G++QG+L GGQ+ Q+                G+S+G+GT
Sbjct: 467  LGISQPLI------------PGMSQGNLPGGQMVQSGIGMNQNMMSGLGPS-GISSGTGT 513

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMPA-QQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG+ QQVQ G+  L V N + ANMP  QQTSGAMQ+A    KYVKVWEG LSGQRQ
Sbjct: 514  MIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQS--KYVKVWEGNLSGQRQ 571

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYRSASASE+LAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 572  GQPVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 631

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 632  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 679


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus trichocarpa]
            gi|222864996|gb|EEF02127.1| PHYTOCHROME AND FLOWERING
            TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  604 bits (1557), Expect = e-170
 Identities = 336/529 (63%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QCSVSLS+I P+QLPKLR IYNAGKRN RAA+P +D VKNP+ LVL+SE+FM
Sbjct: 161  ETVAKSFPQCSVSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFM 220

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALS  G+T++ +NQ P+K+D +SV SV+GP PTSIP VNGS+ +R +I VG+   A
Sbjct: 221  EARAALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTA 280

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKPM 1164
            TVKVEP+TI S A    FPH PSVP   SQG+            Q++ T+ D+VQ+ KP 
Sbjct: 281  TVKVEPSTITSMANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKPN 340

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSAN-----SMGLQTMGATPMAMHMSNMI 999
            +  ++Q  RP  PAAANV+ILNN+SQ RQ MNSA      S+GL ++  T +AMHMSNMI
Sbjct: 341  VSVMTQSARPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMI 400

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  A  VFS GQ G ++ ++GSG L G TQI  N+ LG F+SATSN+S N N
Sbjct: 401  SSGMASS-VPAAPTVFSSGQPGVSS-ITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSN 458

Query: 818  HG-MSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G +SQPM NLQ  VS+GQSA G++QG+++G Q+ Q+                GVS+G  
Sbjct: 459  LGRISQPMGNLQAGVSIGQSAPGMSQGNISGAQMVQSGMGANPNTMSGLGPS-GVSSGLN 517

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQR 465
            TMIPTPG+ QQVQ+G+QPL   N S  N+  +QQT+G +Q  P   KYVKVWEG LSGQR
Sbjct: 518  TMIPTPGMSQQVQSGMQPLGANNNSADNLSMSQQTAGGLQ--PPQSKYVKVWEGNLSGQR 575

Query: 464  QGQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQ 285
            QGQPVFIT+LEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQ
Sbjct: 576  QGQPVFITRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQ 635

Query: 284  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 636  HGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 684


>ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            25-like isoform X2 [Gossypium raimondii]
            gi|763813221|gb|KJB80073.1| hypothetical protein
            B456_013G080300 [Gossypium raimondii]
          Length = 822

 Score =  599 bits (1544), Expect = e-168
 Identities = 334/527 (63%), Positives = 395/527 (74%), Gaps = 11/527 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVA+SFAQCSVSLSVI P+QL KL+ IY+AGKRNPRAA+P +D VKN   LVL+SE+FM
Sbjct: 170  ETVARSFAQCSVSLSVICPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E RAALSRSG+ ++  NQ P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   A
Sbjct: 230  EGRAALSRSGVPSLATNQSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATA 286

Query: 1328 TVKVEPNTIPSSA----FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKPM 1164
            TVKVEP TI S A    F H PSVP  PSQ I            QE +T+ DN+QE KP 
Sbjct: 287  TVKVEPTTITSMATGPAFSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKPS 346

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVR----QAMNSANSMGLQTMGATPMAMHMSNMIS 996
            + G++QP RP  PAAANVNILNNLSQ R     A+    S+GLQ+MG TP+AMHMSNMIS
Sbjct: 347  VSGMTQPSRPVPPAAANVNILNNLSQARVMSSAALTGGTSIGLQSMGQTPVAMHMSNMIS 406

Query: 995  SGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPNH 816
            SGMAS+ + PA  V S GQ  + T+L+GSG L G  Q+  N+ L  FSSA+SN++ N N 
Sbjct: 407  SGMASS-VPPAHTVLSSGQP-TMTSLTGSGALTGTAQVPPNSGLSTFSSASSNVAGNSNI 464

Query: 815  GMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGTM 636
            G+SQP  N+QG V++GQS  G++QG+ +G Q+ Q+                 VS+G+GTM
Sbjct: 465  GISQPTGNVQGAVNIGQSVPGMSQGNHSGTQMMQSGVGMSQNMSALGQST--VSSGNGTM 522

Query: 635  IPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQG 459
            IPTPG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG LSGQRQG
Sbjct: 523  IPTPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQRQG 580

Query: 458  QPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQHG 279
            QPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQHG
Sbjct: 581  QPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHG 640

Query: 278  FLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            FLGQLQEKKLCAVIQLP QTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 641  FLGQLQEKKLCAVIQLPQQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 687


>ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 25 [Prunus mume]
          Length = 868

 Score =  598 bits (1543), Expect = e-168
 Identities = 341/528 (64%), Positives = 395/528 (74%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            E VAKSF QCSVSLSVI P+QLPKLR IYNAGKRNPR A+P ID  KNP  LVL+SE+FM
Sbjct: 170  EAVAKSFPQCSVSLSVICPKQLPKLRAIYNAGKRNPRVADPPIDNAKNPQFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARA LSR G TN+P+N  P+KMD + V SV+GP PTS+P VNGS+M+RQ + VG+  PA
Sbjct: 230  EARATLSRPGSTNLPSNPSPVKMDIAPVASVTGPPPTSMPSVNGSVMNRQPVAVGNVPPA 289

Query: 1328 TVKVEPNTIPSS----AFPHPPSVPHGPSQGIXXXXXXXXXXXXQEIT-NNDNVQEFKPM 1164
            TVKVEP+T+ S     AFPH PSV   PSQG+            QE+T NN+NV + KP+
Sbjct: 290  TVKVEPSTVSSMVAGPAFPHIPSV-RPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPV 348

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G++ P RP G      +ILNN+SQ R  MNSA      S+GLQTMG  PMAMH+SNMI
Sbjct: 349  VSGVTHPSRPVG------SILNNISQAR-VMNSAALTGGTSIGLQTMGQNPMAMHVSNMI 401

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ +  AQNVFS          SGSG L   TQ+AQN+ L  F+SA SN+S N N
Sbjct: 402  SSGMASS-VGAAQNVFSS---------SGSGTL---TQVAQNSGLSSFTSANSNVSGNNN 448

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             G+SQPM+NLQG VS+GQS  G++QG+L+G Q+ Q+                G S+G+GT
Sbjct: 449  LGISQPMSNLQGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSS-GSSSGTGT 507

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            MIPTPG PQQVQAGIQ L   N+S  N+P +QQTS A+QSA    KYVKVWEG LSGQRQ
Sbjct: 508  MIPTPGRPQQVQAGIQSLXANNSSAPNVPLSQQTSSALQSAQS--KYVKVWEGNLSGQRQ 565

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYRSASASETLAA+WP  MQIVRLISQDHM+NKQYVG+ADFLVFRA+NQH
Sbjct: 566  GQPVFITRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQH 625

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 626  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 673


>ref|XP_007046292.1| Phytochrome and flowering time regulatory protein isoform 2
            [Theobroma cacao] gi|508710227|gb|EOY02124.1| Phytochrome
            and flowering time regulatory protein isoform 2
            [Theobroma cacao]
          Length = 860

 Score =  595 bits (1534), Expect = e-167
 Identities = 337/528 (63%), Positives = 393/528 (74%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSFAQCSVSLSVI P+QL KL+ IY+AGKRNPRA +P +D V+NP  LVL+SE+FM
Sbjct: 170  ETVAKSFAQCSVSLSVICPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFM 229

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            E RAALSR G+ ++ +NQ P+KMD +SV SV           NGSMMSRQ + VG+   A
Sbjct: 230  EGRAALSRPGVPSLASNQSPVKMDMASVTSV-----------NGSMMSRQPVSVGNVPTA 278

Query: 1328 TVKVEPNTIPSS----AFPHPPSVPHGPSQGIXXXXXXXXXXXXQEITNN-DNVQEFKPM 1164
            T+KVEP TI S     AFPH P+VP  PS  I            QE+ N+ DNVQE KP 
Sbjct: 279  TIKVEPTTITSMGTGPAFPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKPS 338

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSA-----NSMGLQTMGATPMAMHMSNMI 999
            + G++QPLRP  P AANVNILNNLSQ R  MNSA      S+GL +MG TP+AMHMSNMI
Sbjct: 339  VSGMTQPLRPV-PPAANVNILNNLSQAR-VMNSAALTGGTSIGLPSMGQTPVAMHMSNMI 396

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+ + PAQ VFS GQS   T+L+GSG L G  Q+  N+ L  F+SATSN++ N N
Sbjct: 397  SSGMASS-VPPAQTVFSSGQS-CMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSN 454

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSLTGGQIGQAXXXXXXXXXXXXXXQPGVSAGSGT 639
             GMSQPM N+Q  VS+GQS  G++QG+ +G Q+ Q+                 VS+G+GT
Sbjct: 455  IGMSQPMGNVQSGVSMGQSVPGMSQGNHSGAQMVQSGVGMSQNMSGLGPST--VSSGTGT 512

Query: 638  MIPTPGVPQQVQAGIQPLNVANTSTANMP-AQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            M P PG+ QQVQ+G+Q L V+N+S A+MP +QQTS A+QSA    KYVKVWEG LSGQRQ
Sbjct: 513  MFPIPGMSQQVQSGMQTLGVSNSSAASMPLSQQTSSALQSAQS--KYVKVWEGNLSGQRQ 570

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFIT+LEGYRSASASETLAA WP  MQIVRLISQDHM+NKQYVGKADFLVFRA+NQH
Sbjct: 571  GQPVFITRLEGYRSASASETLAAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQH 630

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 631  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 678


>ref|XP_010923574.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
            isoform X4 [Elaeis guineensis]
          Length = 713

 Score =  592 bits (1525), Expect = e-166
 Identities = 329/528 (62%), Positives = 387/528 (73%), Gaps = 12/528 (2%)
 Frame = -1

Query: 1685 ETVAKSFAQCSVSLSVISPRQLPKLRGIYNAGKRNPRAAEPAID-VKNPYNLVLLSEHFM 1509
            ETVAKSF QC VSLSVISP+QLPKLR IYNAGKRNPRA +PA+D VKNP  LVLLSE+FM
Sbjct: 66   ETVAKSFGQCCVSLSVISPKQLPKLRSIYNAGKRNPRAVDPAVDHVKNPQFLVLLSENFM 125

Query: 1508 EARAALSRSGITNMPANQGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPA 1329
            EARAALSR  + ++ +NQG +K+D +S   + GP  T+ P VNGSM++R  + VG+   A
Sbjct: 126  EARAALSRPLLGSLSSNQGVVKLDGASAAPIPGP-STNNPTVNGSMINRPPVTVGNVPTA 184

Query: 1328 TVKVEPNTIPSS----AFPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKPM 1164
            TVK+EP T+PS     AFPH PS+    +QG+            QE+  NND VQE KP+
Sbjct: 185  TVKMEPTTVPSMVSGPAFPHMPSISTVATQGVANLQNSAPSPTSQEMGANNDGVQEIKPL 244

Query: 1163 IGGLSQPLRPTGPAAANVNILNNLSQVRQAMNSAN-----SMGLQTMGATPMAMHMSNMI 999
            +  +SQ LRP GP  ANV+ILNNLSQ RQ M SA+     S+GLQTMGATPMAMHMSNMI
Sbjct: 245  VNPISQSLRPVGPTPANVSILNNLSQHRQMMTSASIAGASSIGLQTMGATPMAMHMSNMI 304

Query: 998  SSGMASTALSPAQNVFSPGQSGSNTTLSGSGPLVGNTQIAQNTTLGGFSSATSNISVNPN 819
            SSGMAS+A+S              T+++GSGPL+   Q+AQN+ LG F+SATSN+S N N
Sbjct: 305  SSGMASSAMSGI------------TSVAGSGPLMATAQVAQNSALGSFASATSNMSGNSN 352

Query: 818  HGMSQPMANLQGPVSLGQSAAGINQGSL-TGGQIGQAXXXXXXXXXXXXXXQPGVSAGSG 642
             G+S  +ANLQG + +G S  G+ QGSL +  QIGQ                  +S+G G
Sbjct: 353  IGISPALANLQGNIGMGTSVPGVGQGSLASSAQIGQGGIGMNQNIMNNLGPT-SISSGPG 411

Query: 641  TMIPTPGVPQQVQAGIQPLNVANTSTANMPAQQTSGAMQSAPGPDKYVKVWEGALSGQRQ 462
            TMIPTPG+ QQ  AG+  L V+N ST +MP  Q +  +Q AP   KYVK+WEGALSGQRQ
Sbjct: 412  TMIPTPGMSQQ--AGLHSLGVSNNSTMSMPVSQHASNVQQAPS--KYVKIWEGALSGQRQ 467

Query: 461  GQPVFITKLEGYRSASASETLAADWPMMMQIVRLISQDHMHNKQYVGKADFLVFRALNQH 282
            GQPVFI KLEGYRSASASETLAADWP+ MQIVRLI+Q+HM+NKQYVGKADFLVFR LNQH
Sbjct: 468  GQPVFICKLEGYRSASASETLAADWPLTMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQH 527

Query: 281  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKASRLIGMLFPGDMVVFKPQ 138
            GFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 528  GFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQ 575