BLASTX nr result

ID: Papaver30_contig00062486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00062486
         (666 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96731.1| retrotransposon protein, putative, unclassified [...    60   2e-06

>gb|ABA96731.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 460

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 53/90 (58%)
 Frame = -1

Query: 339 EAECDAVLEAICWAKKLNIHHLELQTDSKNVVAAINGVFTCLSWRNQRIIEDCKHYLSNF 160
           +AE +A+L ++   K +   H+E   DS+ VV  + GV+ CL     R ++ C   ++NF
Sbjct: 316 QAEYNALLFSLQVIKLVGAKHVEAFGDSELVVQQVAGVYNCLDGSLNRYLDSCFDIIANF 375

Query: 159 DSWICQHISRKNNKPADLLAKHARRFKISK 70
           D++  +HI+R +N  A+ LA+HA  + + K
Sbjct: 376 DNFAIRHIARHDNSIANDLAQHASSYNVKK 405


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