BLASTX nr result
ID: Papaver30_contig00062032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00062032
(473 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009334552.1| PREDICTED: uncharacterized protein LOC103927... 49 2e-10
ref|XP_009334551.1| PREDICTED: uncharacterized protein LOC103927... 49 2e-10
ref|XP_009353199.1| PREDICTED: uncharacterized protein LOC103944... 48 4e-10
ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963... 48 6e-10
ref|XP_008233465.1| PREDICTED: putative ribonuclease H protein A... 47 2e-08
gb|KHN37115.1| Putative ribonuclease H protein, partial [Glycine... 49 3e-08
ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein A... 45 4e-08
ref|XP_006589028.1| PREDICTED: uncharacterized protein LOC100815... 43 6e-08
gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas] 50 9e-08
ref|XP_006605038.1| PREDICTED: putative ribonuclease H protein A... 43 9e-08
ref|XP_006587778.1| PREDICTED: putative ribonuclease H protein A... 52 9e-08
emb|CDY51317.1| BnaCnng20620D [Brassica napus] 51 1e-07
ref|XP_013665533.1| PREDICTED: uncharacterized protein LOC106369... 51 1e-07
gb|EEE63169.1| hypothetical protein OsJ_17978 [Oryza sativa Japo... 44 1e-07
ref|XP_009595914.1| PREDICTED: uncharacterized protein LOC104092... 46 1e-07
ref|XP_008382787.1| PREDICTED: putative ribonuclease H protein A... 44 2e-07
ref|XP_008377216.1| PREDICTED: putative ribonuclease H protein A... 45 3e-07
ref|XP_006601683.1| PREDICTED: putative ribonuclease H protein A... 49 3e-07
ref|XP_013608540.1| PREDICTED: uncharacterized protein LOC106315... 50 3e-07
ref|XP_006603213.1| PREDICTED: putative ribonuclease H protein A... 42 3e-07
>ref|XP_009334552.1| PREDICTED: uncharacterized protein LOC103927360 [Pyrus x
bretschneideri]
Length = 1270
Score = 48.5 bits (114), Expect(2) = 2e-10
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSVDYISPTVLRQW 347
C +C ET H+F+ C VEP+W + SW+ + V SP +
Sbjct: 980 CPICCCHDETIEHIFLSCSWVEPIWFGGALGYKMDRHSLPSWSDWIQGV--FSPNL---- 1033
Query: 348 CNVD*ISGIKWL--YILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
CN I W YI+ F W IWK +++FK +P +K+L
Sbjct: 1034 CNS---GDIMWRQSYIV-FTCWCIWKARCDFVFKEVPINPLKVL 1073
Score = 43.1 bits (100), Expect(2) = 2e-10
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNF---------VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNE 165
+VK Y +L + + VP W+ +WKL+ P K++ FLW+ H+ L +
Sbjct: 908 SVKSGYRWLQGRSLARRDLRRPSVRGVPKAFWKGIWKLEVPPKLRHFLWLTVHNCLPTRD 967
Query: 166 PLYRKKLVST 195
L+R++ T
Sbjct: 968 ALFRRRSSQT 977
>ref|XP_009334551.1| PREDICTED: uncharacterized protein LOC103927359 [Pyrus x
bretschneideri]
Length = 1270
Score = 48.5 bits (114), Expect(2) = 2e-10
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSVDYISPTVLRQW 347
C +C ET H+F+ C VEP+W + SW+ + V SP +
Sbjct: 980 CPICCCHDETIEHIFLSCSWVEPIWFGGALGYKMDRHSLPSWSDWIQGV--FSPNL---- 1033
Query: 348 CNVD*ISGIKWL--YILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
CN I W YI+ F W IWK +++FK +P +K+L
Sbjct: 1034 CNS---GDIMWRQSYIV-FTCWCIWKARCDFVFKEVPINPLKVL 1073
Score = 43.1 bits (100), Expect(2) = 2e-10
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNF---------VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNE 165
+VK Y +L + + VP W+ +WKL+ P K++ FLW+ H+ L +
Sbjct: 908 SVKSGYRWLQGRSLARRDLRRPSVRGVPKAFWKGIWKLEVPPKLRHFLWLTVHNCLPTRD 967
Query: 166 PLYRKKLVST 195
L+R++ T
Sbjct: 968 ALFRRRSSQT 977
>ref|XP_009353199.1| PREDICTED: uncharacterized protein LOC103944460 [Pyrus x
bretschneideri]
Length = 1429
Score = 47.8 bits (112), Expect(2) = 4e-10
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNF---------VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNE 165
+VK Y +L + + VP W+ +WKL+ P K++ FLW+ H+ L E
Sbjct: 882 SVKSGYRWLQGRSLARRDKRRPSVRGVPMAFWKGIWKLEVPPKLRHFLWLTMHNCLPTRE 941
Query: 166 PLYRKK--LVSTRDVIC 210
LYR++ L ST + C
Sbjct: 942 ALYRRRSSLTSTCPICC 958
Score = 43.1 bits (100), Expect(2) = 4e-10
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSVDYISPTVLRQW 347
C +C ET H+F+ C VEP+W + SW +++I
Sbjct: 954 CPICCCHDETIEHIFLSCSWVEPIWFGGALGYKLDRLSLPSW------LEWIQKVFSPNL 1007
Query: 348 CNVD*ISGIKW--LYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
CN W YI+ F W IWK + +FKG+ +K+L
Sbjct: 1008 CN---FGDTMWRQSYIV-FTCWCIWKARCDLVFKGMSVNPLKVL 1047
>ref|XP_009375083.1| PREDICTED: uncharacterized protein LOC103963932 [Pyrus x
bretschneideri]
Length = 1815
Score = 47.8 bits (112), Expect(2) = 6e-10
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSVDYISPTVLRQW 347
C +C ET H+F+ C VEP+W + SW+ + V SP +
Sbjct: 1525 CPICCCHDETIEHIFLSCSWVEPIWFGGALGYKMDRPSLPSWSDWIQGV--FSPNL---- 1578
Query: 348 CNVD*ISGIKWL--YILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
CN I W YI+ F W IWK +++FK +P +K+L
Sbjct: 1579 CNS---GDIMWRQSYIV-FTCWCIWKARCDFVFKEVPINPLKVL 1618
Score = 42.4 bits (98), Expect(2) = 6e-10
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 64 VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVST 195
VP W+ +WKL+ P K++ FLW+ H+ L + L+R++ T
Sbjct: 1479 VPKAFWKGIWKLEVPPKLRHFLWLTVHNCLPTRDALFRRRSSQT 1522
>ref|XP_008233465.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 547
Score = 46.6 bits (109), Expect(2) = 2e-08
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKV--QSWTGFYPSVDYI---SPTVLRQ--WCNVD 359
C +C ETT H+ C + +W V S G + +D++ +L Q WC
Sbjct: 252 CGVCEWPIETTLHILRDCYKARGIWNTVLMPSHHGHFFQMDFLPWFQTNLLSQAVWC--- 308
Query: 360 *ISGIKWLYILPFVLWSIWKGMNEWIFKG---IPFKQMKIL 473
S I W + F W +WK N +F+G +PF +++
Sbjct: 309 --SNIPWSPVFIFTCWYVWKWRNHQVFQGDEDVPFDPKQLI 347
Score = 38.5 bits (88), Expect(2) = 2e-08
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLV 189
+VK AYN G P+ + LWKLK P K++ F W+ ++ NE R++L+
Sbjct: 192 SVKTAYNLFFK---GPSWPDYSFSSLWKLKIPLKLQIFAWLTAQGKILSNEQRVRRQLI 247
>gb|KHN37115.1| Putative ribonuclease H protein, partial [Glycine soja]
Length = 200
Score = 48.5 bits (114), Expect(2) = 3e-08
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSW---TGFYPSVDYISPTVLRQWCNVD*ISG 371
C LC E HLF CR+V P+W + SW + +P D + VD +
Sbjct: 83 CPLCRNAVEDAGHLFFHCRKVTPIWWESSSWVSQSAAFPK-DPKMHFLQHDPSMVDGLRA 141
Query: 372 IKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
+W + V W+IWK N+ IF F K++
Sbjct: 142 KRWKWWWIVVTWTIWKQRNKLIFSNDFFDSNKVM 175
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVS 192
TV+ AYN L+ + + + + + LWKLK P K F W RL L+R++ V
Sbjct: 20 TVQSAYN-LLREATADGIQDSVYHELWKLKVPLKCTIFAWRLLRDRLPTKINLHRRQ-VE 77
Query: 193 TRDVIC 210
D C
Sbjct: 78 VSDTSC 83
>ref|XP_008237302.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
Length = 394
Score = 45.1 bits (105), Expect(2) = 4e-08
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKL 186
+VK AYN + G+ ++ W +LWKL+ P K+ F W+ F ++ NE R++L
Sbjct: 42 SVKSAYNMVFE---GSTCSDVAWTFLWKLRIPPKLHIFFWLVFQGKILSNEQRVRRQL 96
Score = 38.9 bits (89), Expect(2) = 4e-08
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKV--QSWTGFYPSVDYISPTVLRQWCNVD*IS-- 368
C C+ E+ H+ C + + +W + S + + ++D+ + W V+ +S
Sbjct: 102 CGSCHWPMESILHILRDCVKAKKVWNALLNSSQSARFFTMDF------QPWLRVNLMSKI 155
Query: 369 ----GIKWLYILPFVLWSIWKGMNEWIFKG 446
GI W + F W IWK N ++F G
Sbjct: 156 VWADGIPWNLVFVFTCWYIWKWRNHYVFHG 185
>ref|XP_006589028.1| PREDICTED: uncharacterized protein LOC100815879 [Glycine max]
Length = 252
Score = 43.1 bits (100), Expect(2) = 6e-08
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGF------YPSVDYISPTVLRQWCNVD* 362
C C+ E+ HLF C +V PLW + SW +P +I + +
Sbjct: 121 CPFCSSVEESASHLFFHCSKVLPLWWESLSWVNMVAVFPQHPRQHFIQ----HMHQSYEG 176
Query: 363 ISGIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
+ +W + + WSIWK N IF F K++
Sbjct: 177 LMATRWKWWWLSLTWSIWKHRNSIIFSSSTFNANKMM 213
Score = 40.4 bits (93), Expect(2) = 6e-08
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVS 192
+VK AY+ L + P +++ LWKLK P K+ F W + RL + +R+K V
Sbjct: 58 SVKSAYSVLRQDVLEE-APAEEFKELWKLKVPSKVAMFAWRLLNDRLPTKDN-WRRKQVE 115
Query: 193 TRDVIC 210
D +C
Sbjct: 116 LNDYLC 121
>gb|AIK35195.1| LINE-type retrotransposon LIb DNA [Ipomoea batatas]
Length = 1836
Score = 49.7 bits (117), Expect(2) = 9e-08
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLRQWC--NVD*ISGI 374
C C + ET HLF C W T F S + + C N GI
Sbjct: 1548 CPSCGTNDETIDHLFRSCDVAVNCWEAAAPPTAFMYSFHLPVTVWMEKSCASNQTNGRGI 1607
Query: 375 KWLYILPFVLWSIWKGMNEWIFKGI 449
W I P++LW++WKG N +F +
Sbjct: 1608 SWRLIFPYILWNMWKGRNNQVFNNV 1632
Score = 33.1 bits (74), Expect(2) = 9e-08
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 10 VTVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLV 189
V+V A++++ G+ + + ++WKL C K+K F+W + L N R+ L+
Sbjct: 1488 VSVSSAFSFI----SGHDDSDNSYAWIWKLPCVEKVKLFIWKIMENGLLTNSERRRRGLL 1543
>ref|XP_006605038.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 416
Score = 43.1 bits (100), Expect(2) = 9e-08
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFY------PSVDYISPTVLRQWCNVD* 362
C C E HLF C ++P+W + SW P +++ ++ +
Sbjct: 289 CPFCREAVEVASHLFFHCVFIQPIWWESMSWLNLQTAFPLGPKQNFLQHIFIQ----AEG 344
Query: 363 ISGIKWLYILPFVLWSIWKGMNEWIFKGIPF 455
+ +W Y V W+IWK N +F F
Sbjct: 345 LRSKRWRYWWMVVTWAIWKTRNRVLFSNAEF 375
Score = 39.7 bits (91), Expect(2) = 9e-08
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDW-RYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLV 189
+ + AYN ++ G DW + LWK+K P KI F W RL L+R++ V
Sbjct: 226 STRSAYNLILEASKGG--QQQDWSKELWKIKIPSKISVFAWRLIEDRLPTRMNLHRRQ-V 282
Query: 190 STRDVIC 210
+D+ C
Sbjct: 283 QLQDLRC 289
>ref|XP_006587778.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 381
Score = 52.0 bits (123), Expect(2) = 9e-08
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFY------PSVDYI-------SPTVLR 341
C LC + E HLF CR+V PLW + SW + P + ++ S + R
Sbjct: 279 CPLCRNEVEDAGHLFFHCRKVTPLWWESMSWVSQFHVFPKDPKMHFLQHALTTTSGSRAR 338
Query: 342 QWCNVD*ISGIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
+W KW +I V W+IWK N+ IF F K++
Sbjct: 339 RW---------KWWWIA--VTWTIWKQRNKIIFSNEDFDSNKVM 371
Score = 30.8 bits (68), Expect(2) = 9e-08
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVS 192
T + AY L+ + + + + LWKLK P K F W RL L+R++ V+
Sbjct: 216 TAQSAYK-LLREASAEGIHDTAYHELWKLKVPLKYAIFGWRLIRDRLPTKINLHRRQ-VA 273
Query: 193 TRDVIC 210
D C
Sbjct: 274 VSDTSC 279
>emb|CDY51317.1| BnaCnng20620D [Brassica napus]
Length = 786
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLR-QW---CNVD*IS 368
C LC E+ HLF+ C + +W+ W PS+DY LR +W C+ +
Sbjct: 529 CKLCGLP-ESIDHLFLHCNFAKQVWKSAPVW----PSIDYSGTIELRSEWNSLCSRQNLP 583
Query: 369 --GIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKI 470
G+ + P++LW IWK N +FK F M I
Sbjct: 584 PMGLSMGALTPWILWQIWKARNSLVFKDKGFMSMAI 619
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 67 PNMDWRY-LWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKL 186
P +W+ +WKL K+K F+W H L + E L +++
Sbjct: 483 PGFNWKKNVWKLHTAPKVKLFVWKTLHGALPVGEQLVARQI 523
>ref|XP_013665533.1| PREDICTED: uncharacterized protein LOC106369993 [Brassica napus]
Length = 640
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLR-QW---CNVD*IS 368
C LC E+ HLF+ C + +W+ W PS+DY LR +W C+ +
Sbjct: 383 CKLCGLP-ESIDHLFLHCNFAKQVWKSAPVW----PSIDYSGTIELRSEWNSLCSRQNLP 437
Query: 369 --GIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKI 470
G+ + P++LW IWK N +FK F M I
Sbjct: 438 PMGLSMGALTPWILWQIWKARNSLVFKDKGFMSMAI 473
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 67 PNMDWRY-LWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKL 186
P +W+ +WKL K+K F+W H L + E L +++
Sbjct: 337 PGFNWKKNVWKLHTAPKVKLFVWKTLHGALPVGEQLVARQI 377
>gb|EEE63169.1| hypothetical protein OsJ_17978 [Oryza sativa Japonica Group]
Length = 565
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 64 VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVSTRDVICVI 216
+P+ +W +WK + P K+K F W+ +RLS E L +K +V ++ IC I
Sbjct: 396 MPSPNWDLIWKCRAPLKVKLFAWLLVRNRLSTKENLLKKTIV--QEAICDI 444
Score = 38.5 bits (88), Expect(2) = 1e-07
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKV------QSWTGFYPSVDYISPTVLRQWCNVD* 362
C++CN++ ET +H+ C + W ++ Q T F+ S PT
Sbjct: 442 CDICNQEDETANHMCFSCPFAQAFWTQINVRPQAQDVTQFHRS----GPT--------SQ 489
Query: 363 ISGIKWLYILPFVLWSIWKGMNEWIFKG 446
+ + W +W+IW ++ +F+G
Sbjct: 490 VPALHWQVFFQLCMWAIWNHRHDVVFRG 517
>ref|XP_009595914.1| PREDICTED: uncharacterized protein LOC104092110 isoform X4
[Nicotiana tomentosiformis]
Length = 563
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLRQ----WCNVD*IS 368
C +CN D E+ HLF+ C +W S G + ++ P +++ WC+
Sbjct: 439 CYMCNLDSESVRHLFLHCPLACDIWNMFISIFG----LAWVKPNSIKEAYECWCSWRVGK 494
Query: 369 GIK--WLYILPFVLWSIWKGMNEWIFKGI 449
IK W+ +L + W IW N F GI
Sbjct: 495 SIKKIWVMVLAAIFWCIWNERNRRCFDGI 523
Score = 36.6 bits (83), Expect(2) = 1e-07
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKL 186
TVK+AY +L S + + + W+ +W+ K P K+ F W+ + + L R+ +
Sbjct: 378 TVKKAYAHLCSNN--DLINDWPWKLIWRTKMPPKVICFSWVALNEACLTQDNLNRRSI 433
>ref|XP_008382787.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 801
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNF---------VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNE 165
+VK Y ++ S + VP++ W+ +WKL+ P K++ FLW+ H+ L E
Sbjct: 439 SVKSGYRWIQSXSLARRDCRLSXARRVPSVLWKAIWKLEVPPKLRHFLWLTLHNCLPTCE 498
Query: 166 PLYRKK 183
L+R++
Sbjct: 499 ALFRRR 504
Score = 38.1 bits (87), Expect(2) = 2e-07
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 13/104 (12%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSV--DYISPTVLR 341
C C ET HLF C VEP+W + SW + +V + P+
Sbjct: 511 CPXCLSHDETIEHLFFTCPWVEPVWFGGALNYKIDRAAIHSWVEWLXAVWSSSLVPSNHA 570
Query: 342 QWCNVD*ISGIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
W + + W IWK +++F +P K+L
Sbjct: 571 DWMR----------SYIAYTCWVIWKTRCDFVFNKVPIYPSKVL 604
>ref|XP_008377216.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
domestica]
Length = 302
Score = 45.4 bits (106), Expect(2) = 3e-07
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 64 VPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLV 189
+P+ W+ +WKL+ P KIK F+W FHS L L++K+ V
Sbjct: 115 IPSRVWKLIWKLRIPAKIKHFMWKSFHSALPTMYELFKKRSV 156
Score = 35.8 bits (81), Expect(2) = 3e-07
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Frame = +3
Query: 192 HPGCNLCNRDFETTHHLFMCCREVEPLW-----------RKVQSWTGFYPSVDYISPTVL 338
+P C + + E+ HL + C VEP+W +V +W + +IS +
Sbjct: 158 YPNCLIYHNQEESIEHLLLFCPWVEPVWFGGALNLRMARTRVSNWIEW-----FISAANV 212
Query: 339 RQWCNVD*ISGIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
NVD +S I + + F W IWK +++ +++
Sbjct: 213 LGGHNVDRLSLISY---VAFSCWHIWKAKCNFVYNNCHINPTQVM 254
>ref|XP_006601683.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 222
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSW---TGFYPSVDYISPTVLRQWCNVD*ISG 371
C LC E HLF CR+V P+W + SW + +P D + VD +
Sbjct: 96 CPLCRNAVEDAGHLFFHCRKVTPIWWESSSWVSQSAAFPK-DPKMHFLQHDPSMVDGLRA 154
Query: 372 IKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
+W + V W+IWK N+ IF F K++
Sbjct: 155 KRWKWWWIVVTWTIWKQRNKLIFSNDFFDSNKVM 188
Score = 32.7 bits (73), Expect(2) = 3e-07
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDWRYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLVS 192
T + YN L+ ++ + + + + LWKLK P K F W RL L+R++ V
Sbjct: 33 TAQSNYN-LLREETADGIQDSVYHELWKLKVPLKCTIFAWRLLRDRLPTKINLHRRQ-VE 90
Query: 193 TRDVIC 210
D C
Sbjct: 91 VSDTSC 96
>ref|XP_013608540.1| PREDICTED: uncharacterized protein LOC106315356 [Brassica oleracea
var. oleracea]
Length = 928
Score = 49.7 bits (117), Expect(2) = 3e-07
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLR-QW---CNVD*I- 365
C LC E+ HLF+ C + +W+ W PS+DY LR +W C+ +
Sbjct: 666 CKLCGLP-ESIDHLFLHCNFAKQVWKSAPVW----PSIDYSGTIELRSEWNSLCSRQNLP 720
Query: 366 -SGIKWLYILPFVLWSIWKGMNEWIFKGIPFKQMKIL 473
+G+ + P++LW IWK N +FK F +++
Sbjct: 721 PTGLSMGALAPWILWQIWKARNSLVFKDKGFLVTEVM 757
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 67 PNMDWRY-LWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKL 186
P +W+ +WKL K+K F+W H L + E L +++
Sbjct: 620 PGFNWKKNVWKLHTAPKVKLFVWKTLHGALPVGEQLVARQI 660
>ref|XP_006603213.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 375
Score = 42.0 bits (97), Expect(2) = 3e-07
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +3
Query: 201 CNLCNRDFETTHHLFMCCREVEPLWRKVQSWTGFYPSVDYISPTVLRQWCNVD*ISGI-- 374
C C E HLF C ++P+W + SW + Q ++ +G+
Sbjct: 248 CPFCREAVEEASHLFFHCVFIQPIWWESMSWLNLQTAFPLGPKQNFLQHISIQ-AAGLRS 306
Query: 375 -KWLYILPFVLWSIWKGMNEWIFKGIPF 455
+W Y V W+IWK N +F F
Sbjct: 307 NRWRYWWMAVTWAIWKTRNRVLFSNAEF 334
Score = 38.9 bits (89), Expect(2) = 3e-07
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 13 TVKEAYNYLVSKKMGNFVPNMDW-RYLWKLKCPHKIKSFLWIFFHSRLSLNEPLYRKKLV 189
+ + AYN ++ G + DW + LW++K P KI F W RL L+R++ V
Sbjct: 185 STRSAYNLILEASKGG--QHQDWCKELWRIKIPSKISVFAWRLIEDRLPTRMNLHRRQ-V 241
Query: 190 STRDVIC 210
+D+ C
Sbjct: 242 QLQDLRC 248