BLASTX nr result

ID: Papaver30_contig00061422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00061422
         (519 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein A...    39   4e-06

>ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 685

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 400 LPSLFIWKPVIPPKITFLMWSLVHNKLNTIDTLDR 296
           LPS  IWK  +PPK+  L+W +   K+NT D + R
Sbjct: 511 LPSPQIWKAKVPPKVKVLVWLVALRKVNTCDQIQR 545



 Score = 38.1 bits (87), Expect(2) = 4e-06
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 11/42 (26%)
 Frame = -1

Query: 279 CVLCGNVEESQNHLFLHYKIACKLWY-----------MPKGC 187
           CVLC + EES NH+FLH   + +LW+           +PKGC
Sbjct: 557 CVLCKSGEESVNHVFLHCPYSIQLWWNLLKEVGAVWVIPKGC 598


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