BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00059980
         (683 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   257   4e-66
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        253   6e-65
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   251   2e-64
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     251   2e-64
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   251   4e-64
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               249   1e-63
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                249   1e-63
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         248   2e-63
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           248   2e-63
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   248   3e-63
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   248   3e-63
emb|CDP17738.1| unnamed protein product [Coffea canephora]            245   2e-62
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     243   6e-62
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   243   6e-62
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   241   2e-61
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   240   7e-61
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  236   7e-60
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   234   4e-59
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   234   5e-59
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   234   5e-59

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  257 bits (657), Expect = 4e-66
 Identities = 117/224 (52%), Positives = 159/224 (70%), Gaps = 1/224 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRTLT 491
           D WILDS C+YHM P R+WF  ++EL+ G V MGN++ CKTVGIG+I+++ HDG  R L 
Sbjct: 222 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILR 281

Query: 490 DVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGNKQGNLYFLDGS-XXX 314
           DVR++P+L+KNLIS+G+L+S G  +T++DG+L+   GA+V+++G  + NLY+  GS    
Sbjct: 282 DVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQGSTVVG 341

Query: 313 XXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQH 134
                   +K +    +LWHMRLGH  EK   IL K+GLL G K+ KL FCEHC+  KQ 
Sbjct: 342 TVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQR 401

Query: 133 RTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
           R KFG+A+HNTK  LDYVH DVWGP++  S GG  YFV+F+DD+
Sbjct: 402 RVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDF 445


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  253 bits (647), Expect = 6e-65
 Identities = 119/226 (52%), Positives = 160/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 296 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 355

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 356 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTT 415

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 416 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGK 475

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 476 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDY 521


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  251 bits (642), Expect = 2e-64
 Identities = 119/226 (52%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 262 TSDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 321

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS  +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 322 LSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 381

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 382 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGK 441

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 442 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 487


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  251 bits (642), Expect = 2e-64
 Identities = 119/226 (52%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 205 TSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 264

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 265 LLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTT 324

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 325 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 384

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 385 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDY 430


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  251 bits (640), Expect = 4e-64
 Identities = 118/226 (52%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D W+LD+ C+YHM PNR+WF+TY+ +  G+VLMG+N  CK  G+GTI+IKM DG +RT
Sbjct: 238 TSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRT 297

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L++NLIS+ +LD  GY+ +  DG+L+V +G++V+++ + K  +LY L G+ 
Sbjct: 298 LSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGT- 356

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                         LSN+ LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 357 --TIVGNVAAVTDSLSNSDLWHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGK 414

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R  SFGG+RY ++ +DDY
Sbjct: 415 HKRVKFTTSTHTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDDY 460


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  249 bits (635), Expect = 1e-63
 Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 113 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 172

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 173 LSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTT 232

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L  RGLL G    KL FCEHCIF K
Sbjct: 233 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGK 292

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ ++DY
Sbjct: 293 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDY 338


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  249 bits (635), Expect = 1e-63
 Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 281 TSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 340

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 341 LSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTT 400

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L  RGLL G    KL FCEHCIF K
Sbjct: 401 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGK 460

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ ++DY
Sbjct: 461 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDY 506


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  248 bits (633), Expect = 2e-63
 Identities = 117/226 (51%), Positives = 158/226 (69%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIG ++IKM DG + T
Sbjct: 128 TSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIST 187

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 188 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 247

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 308 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 353


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  248 bits (633), Expect = 2e-63
 Identities = 117/226 (51%), Positives = 158/226 (69%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WILD+AC+YHM PNR+WF+TY+ +  G+VLMG++  C+  GIG ++IKM DG + T
Sbjct: 128 TSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIST 187

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 188 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 247

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHMSE G   L KRGLL G    KL FCEHCIF K
Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 308 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDY 353


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  248 bits (632), Expect = 3e-63
 Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676  TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
            T+D WIL++AC YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 503  TSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 562

Query: 496  LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
            L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 563  LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 622

Query: 319  XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                      + S    T LWHMRLGHM+E G   L KRGLL G    KL FCEHCIF K
Sbjct: 623  ILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 682

Query: 139  QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
              R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 683  HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 728


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  248 bits (632), Expect = 3e-63
 Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676 TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
           T+D WIL++AC YHM PNR+WF+TY+ +  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 296 TSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRT 355

Query: 496 LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
           L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 356 LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 415

Query: 319 XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                     + S    T LWHMRLGHM+E G   L KRGLL G    KL FCEHCIF K
Sbjct: 416 ILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 475

Query: 139 QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
             R KF ++ H T+  LDYVH D+WGP+R TSFGG+RY ++ +DDY
Sbjct: 476 HKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDY 521


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  245 bits (625), Expect = 2e-62
 Identities = 112/225 (49%), Positives = 156/225 (69%), Gaps = 2/225 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRTLT 491
           D WILDS C+YHM+P R WF  ++EL+ G V MGN++ CKTVGIG+I+++ HDG  R L 
Sbjct: 307 DEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILK 366

Query: 490 DVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGNKQGNLYFLDGS--XX 317
           DVR++P L+++LIS+G L+S G ++ ++DG+L+V  GA+++++G ++ NLY+  GS    
Sbjct: 367 DVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVG 426

Query: 316 XXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQ 137
                    +K +   T+LWHMRLG   EK    L K+GLL G K  KL FCEHC+  KQ
Sbjct: 427 TAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQ 486

Query: 136 HRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
            + KFG+ +HNTK  LDYVH DVWGP++  S GG  YFV+FIDD+
Sbjct: 487 RKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDF 531


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  243 bits (621), Expect = 6e-62
 Identities = 117/226 (51%), Positives = 157/226 (69%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676  TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
            T+D WILD+A +YHM PNR+WF+TY+ L  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 331  TSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRT 390

Query: 496  LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
            L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 391  LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 450

Query: 319  XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                      + S    T LWHMRLGHMSE G   L KR LL G    KL FCEHCIF K
Sbjct: 451  ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGK 510

Query: 139  QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
              R KF ++ H T+  LDYVH D+WGP+  TSFGG+RY ++ +DDY
Sbjct: 511  HKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDY 556


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  243 bits (621), Expect = 6e-62
 Identities = 117/226 (51%), Positives = 157/226 (69%), Gaps = 1/226 (0%)
 Frame = -2

Query: 676  TTDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRT 497
            T+D WILD+A +YHM PNR+WF+TY+ L  G+VLMG++  C+  GIGT++IKM DG +RT
Sbjct: 331  TSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRT 390

Query: 496  LTDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSX 320
            L+DVRHIP L+++LIS+ +LD  GYK +  DG+L+V +G++V+++ + K  NLY L G+ 
Sbjct: 391  LSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTT 450

Query: 319  XXXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCK 140
                      + S    T LWHMRLGHMSE G   L KR LL G    KL FCEHCIF K
Sbjct: 451  ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGK 510

Query: 139  QHRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
              R KF ++ H T+  LDYVH D+WGP+  TSFGG+RY ++ +DDY
Sbjct: 511  HKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDY 556


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  241 bits (616), Expect = 2e-61
 Identities = 112/224 (50%), Positives = 147/224 (65%)
 Frame = -2

Query: 673 TDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRTL 494
           +D W+LDS  SYH+ P R WF+TY++++ GS+ M N+  CK VG G+I+I+ HDG   TL
Sbjct: 276 SDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTL 335

Query: 493 TDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGNKQGNLYFLDGSXXX 314
            +VRH+P + KNLIS+  LDS G+  + KDGVL+V +G+ ++++G  +G LYFL GS   
Sbjct: 336 NEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVT 395

Query: 313 XXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQH 134
                      +   T+LWH+RLGHM E+G  IL K  LL G K   L FCEHC+F K H
Sbjct: 396 GSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLH 455

Query: 133 RTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
           R KF  A+H TK  LDY+H D WGP R  S GG R+FVS IDDY
Sbjct: 456 RNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDY 499


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  240 bits (612), Expect = 7e-61
 Identities = 110/212 (51%), Positives = 149/212 (70%), Gaps = 1/212 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRTLT 491
           D WILDS C+YHM P R+WF  ++EL+ G V MGN++ CKTVGIG+I+++ HDG  R L 
Sbjct: 223 DEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILR 282

Query: 490 DVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGNKQGNLYFLDGS-XXX 314
           DVR++P+L+KNLIS+G+L+S G  +T++DG+L+   GA+V+++G  + NLY+  GS    
Sbjct: 283 DVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVG 342

Query: 313 XXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQH 134
                   +K +   T+LWHMRLGH  EK   I  K+GLL G K+ KL FCEHC+  KQ 
Sbjct: 343 TVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQR 402

Query: 133 RTKFGSAVHNTKERLDYVHIDVWGPSRFTSFG 38
           R KFG+A+HNTK  LDYVH DVWGP++  S G
Sbjct: 403 RVKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  236 bits (603), Expect = 7e-60
 Identities = 112/225 (49%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
 Frame = -2

Query: 673 TDSWILDSACSYHMSPNRNWFSTYKELNSGSVLMGNNHACKTVGIGTIRIKMHDGVVRTL 494
           TD WI+DS  ++HM+P R+WF TY+ ++ G+V MGN+HA + VGIGT++IKM+DG +RTL
Sbjct: 288 TDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTL 347

Query: 493 TDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGNK-QGNLYFLDGSXX 317
            +VRH+ EL KNL+SVG LD  GYK  ++ G+L+V++G++V+++  K   NLY L G   
Sbjct: 348 QEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTW 407

Query: 316 XXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQ 137
                       E   T +WH RLGHMSE+G  +L +R L+ G+KSV L FCEHC+  KQ
Sbjct: 408 QMADASVAVGSQE-ETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHCVISKQ 466

Query: 136 HRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
           HR KF  +   +K  LD +H DVW  S   S GG++YFVSFIDDY
Sbjct: 467 HRLKFAKSTARSKHILDLIHSDVW-ESPEVSIGGAKYFVSFIDDY 510


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score =  234 bits (597), Expect = 4e-59
 Identities = 113/225 (50%), Positives = 153/225 (68%), Gaps = 2/225 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVL-MGNNHACKTVGIGTIRIKMHDGVVRTL 494
           D WILD+ CS+H+  NR+WFS+YK + +G V+ MG+++  + VGIG+++IK HDG+ RTL
Sbjct: 185 DEWILDTTCSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTL 244

Query: 493 TDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSXX 317
            DVRHIP + +NLIS+ +LD+ GYK +   GV++V +G++V + G+    NLY L GS  
Sbjct: 245 KDVRHIPRMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 304

Query: 316 XXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQ 137
                    +K E S T +WHMRLGHMSE G   L+KR LL G     + FCEHC+F K 
Sbjct: 305 HGYVTAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKH 364

Query: 136 HRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
            R KF ++VH TK  LDYVH D+WGPSR  S GG+RY ++ IDDY
Sbjct: 365 KRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 409


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  234 bits (596), Expect = 5e-59
 Identities = 114/225 (50%), Positives = 152/225 (67%), Gaps = 2/225 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVL-MGNNHACKTVGIGTIRIKMHDGVVRTL 494
           D WILD+ACS+H+  NR+WFS+YK + +G V+ MGN++  + VGIG+++IK HDG+ RTL
Sbjct: 290 DEWILDTACSFHIYINRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTL 349

Query: 493 TDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSXX 317
            DVRHIP + +NLIS+ +LD+ GYK +   GV++V +G++V + G+    NLY L GS  
Sbjct: 350 KDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 409

Query: 316 XXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQ 137
                     K E + T LWHMRLGHMSE G   L+KR LL G     + FCE C+F K 
Sbjct: 410 HGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKH 469

Query: 136 HRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
            R KF ++VH TK  LDYVH D+WGPSR  S GG+RY ++ IDDY
Sbjct: 470 KRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDY 514


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  234 bits (596), Expect = 5e-59
 Identities = 114/225 (50%), Positives = 153/225 (68%), Gaps = 2/225 (0%)
 Frame = -2

Query: 670 DSWILDSACSYHMSPNRNWFSTYKELNSGSVL-MGNNHACKTVGIGTIRIKMHDGVVRTL 494
           D WILD+ACS+H+  NR+WFS+YK + +G V+ MG+++  + VGIG+++IK HDG+ RTL
Sbjct: 290 DEWILDTACSFHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTL 349

Query: 493 TDVRHIPELRKNLISVGSLDSSGYKITVKDGVLQVLRGAVVLIRGN-KQGNLYFLDGSXX 317
            DVRHIP + +NLIS+ +LD+ GYK +   GV++V +G++V + G+    NLY L GS  
Sbjct: 350 KDVRHIPGMARNLISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTL 409

Query: 316 XXXXXXXXXAKSELSNTRLWHMRLGHMSEKGTTILIKRGLLTGVKSVKLGFCEHCIFCKQ 137
                    +K E   T LWHMRLGHMSE G   L+KR LL G    K+ FCEHC+F K 
Sbjct: 410 HGSVTAAAVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKH 469

Query: 136 HRTKFGSAVHNTKERLDYVHIDVWGPSRFTSFGGSRYFVSFIDDY 2
            R KF ++VH TK  LDYVH D+WGPSR    GG+RY ++ IDDY
Sbjct: 470 KRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDY 514