BLASTX nr result

ID: Papaver30_contig00059684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00059684
         (579 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881747.1| F-box family protein [Arabidopsis lyrata sub...    63   1e-07
ref|XP_009607442.1| PREDICTED: putative F-box protein At1g32420 ...    60   6e-07
ref|XP_009772624.1| PREDICTED: putative F-box protein At1g32420 ...    57   5e-06
ref|XP_004305866.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   7e-06

>ref|XP_002881747.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327586|gb|EFH58006.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 439

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
 Frame = -3

Query: 556 KSLMRFKCVSKHWLYLIEEDSFFIDLHLTRSKARPSLVYLISLPSVINQQFSEIRCKGQD 377
           +SLMRFKCVSKHW  LI    F   L  T ++ +P L Y+  +    ++    I     D
Sbjct: 67  QSLMRFKCVSKHWSSLIFSRYFCNLLFTTVTRQQPRL-YMCLVDDGGHRILLSISSPSPD 125

Query: 376 E---VFLKSDLSLEGIGRADIHTMRKIDMFCCDFILRPISGLMCFVDYHKHAVCIYNIRT 206
               V +  DLS+ G+G                F L  + GLMCF    K   CIYN  T
Sbjct: 126 NTCYVVVDQDLSIPGMG---------------GFFLNIVRGLMCFSRSKK--ACIYNPST 168

Query: 205 REAS------PWIQSTLLLDEKEKHPETNALDYHVTSYKFGFDPTTREHKVLC 65
           +  +      P I+S ++  + +K         H+T Y  G DP + ++K++C
Sbjct: 169 QGRTKQLLTLPAIKSDIVAQQGQKK--------HLTRYYIGHDPVSDQYKLVC 213


>ref|XP_009607442.1| PREDICTED: putative F-box protein At1g32420 [Nicotiana
           tomentosiformis]
          Length = 270

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 54/170 (31%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
 Frame = -3

Query: 556 KSLMRFKCVSKHWLYLIEEDSFFIDLHLTRSKARPSLVYL-----ISLPSVINQQFSEIR 392
           KSLMRFKCV+K W  LI  D  F+  H+  S ARPS  +L     IS P    Q  S   
Sbjct: 27  KSLMRFKCVAKAWNTLIRHDPNFVKSHIAHSLARPSATHLLFQLDISPPLPSGQPSSN-- 84

Query: 391 CKGQDEVFLKSDLSLEGIGRADIHTMRKIDMFCCDFILRPISGLMCFVDY--HKHAVCIY 218
              + ++  +S L L     +D   +  I    C       +GL+C  D   HK  + +Y
Sbjct: 85  -SPRAQLKERSPLQLAPHHYSDTRVVYDICSNQC-------NGLVCLYDLYRHKSQIYLY 136

Query: 217 NIRTREASPWIQSTLLLDEKEKHPETNALDYHVTSYKFGFDPTTREHKVL 68
           NI T E      S + + E  K P          +   GFDP   ++K+L
Sbjct: 137 NITTGEIKALPSSLVKVFEYSKVP----------TLFMGFDPIKEKYKLL 176


>ref|XP_009772624.1| PREDICTED: putative F-box protein At1g32420 [Nicotiana sylvestris]
          Length = 360

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 45/163 (27%), Positives = 63/163 (38%)
 Frame = -3

Query: 556 KSLMRFKCVSKHWLYLIEEDSFFIDLHLTRSKARPSLVYLISLPSVINQQFSEIRCKGQD 377
           KSLMRF+CVSK W  LI  +  F+ LH  RS+ RP    L+        +  E R     
Sbjct: 22  KSLMRFRCVSKAWNSLIRHEPDFVKLHNARSQTRPLASRLLFEIGTRYHEVVESRTS--- 78

Query: 376 EVFLKSDLSLEGIGRADIHTMRKIDMFCCDFILRPISGLMCFVDYHKHAVCIYNIRTREA 197
                    +EG            D         P +GL+CF ++      +YN+ T E 
Sbjct: 79  ----NLPTQVEGFSLQLARPRHYFDFDEVTICSNPCNGLVCFYNHKDTLSYLYNVTTGEI 134

Query: 196 SPWIQSTLLLDEKEKHPETNALDYHVTSYKFGFDPTTREHKVL 68
                S   L +  + P          +   GFDP T  +K+L
Sbjct: 135 KALPSSLTRLPKGRRGP----------TLFLGFDPATERYKLL 167


>ref|XP_004305866.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Fragaria
           vesca subsp. vesca]
          Length = 381

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
 Frame = -3

Query: 559 LKSLMRFKCVSKHWLYLIEEDSFFIDLHLTRSKARPSLVYLISLPSVINQQFSEIRCKGQ 380
           +KSL+RF+CV K W  LI E S+F+D HL R+K  P L     +   I  Q + + C   
Sbjct: 37  VKSLLRFRCVCKAWHALISE-SYFVDKHLHRTKINPLLKRKSHIFRSIEYQ-ALLNCLSN 94

Query: 379 DEVFLKSDLSLEGIGRADIHTMRKIDMFCCDFILRPISGLMC-FVDYHKHAVCIYNIRTR 203
           D   L  +L        ++    K   F    ++   +GL+C  +D+    V ++N+ TR
Sbjct: 95  DGPILSRELDYP---LMNLPVSIKPGTFNW-VLIGSCNGLICILIDWFTKLVMLWNLCTR 150

Query: 202 EASPWIQSTLLLDEKEKHPETNALDYHVTSYKFGFDPTTREHKVLCMWYITVGE 41
                I   L        P+   LD+ +  + FG+D TT ++KV+    +  G+
Sbjct: 151 -----ISQVL--------PQPCDLDFDLCCFGFGYDSTTDDYKVILNGILNGGD 191


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