BLASTX nr result

ID: Papaver30_contig00059518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00059518
         (579 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418...    44   1e-06
ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A...    45   1e-06
ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein A...    43   3e-06
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A...    41   9e-06

>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
          Length = 1384

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
 Frame = -3

Query: 283  FFAEVMAVLCAGEWVVFR--------SDSSSVLKAFVTGKV--PWFAVTRWNMICNNLTH 134
            F+AE+ AV+ A E    R        SDSSSV+  F  G    PW   TRWN    +L +
Sbjct: 1266 FYAELHAVILAVELAHARGWQNLWLESDSSSVISCFAXGSFSPPWSLQTRWNNCTLHLQN 1325

Query: 133  MEF--VHSFREINFSAGKPVKRG 71
            M F   H FRE N  A K    G
Sbjct: 1326 MXFRCSHIFREXNVVADKLANLG 1348



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 506  DLQILKTVGMKSRCVQSLHVINCKFCLPRHPKVLMFCDGASKGNPGDAGYGFIARSSDGE 327
            D Q+L ++G+     ++  ++   +  P    V +  DG +KGNPG A  G + R S G 
Sbjct: 1192 DRQLLVSLGISPNSCKAPSIVPVXWHXPPFSWVKVNTDGLAKGNPGPAACGGVXRDSAGY 1251

Query: 326  F 324
            F
Sbjct: 1252 F 1252


>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1048

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
 Frame = -3

Query: 283  FFAEVMAVLCAGEWVVFR--------SDSSSVLKAFVTGKV--PWFAVTRWNMICNNLTH 134
            F+AE+ AV+ A E    R        SDSSSV+  F +G    PW   TRWN    +L +
Sbjct: 930  FYAELHAVILAVELTHARGWQNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLHLQN 989

Query: 133  MEFV--HSFREINFSAGKPVKRG 71
            M F   H FRE N  A K    G
Sbjct: 990  MVFXCSHIFREXNVVADKLANLG 1012



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 506  DLQILKTVGMKSRCVQSLHVINCKFCLPRHPKVLMFCDGASKGNPGDAGYGFIARSSDGE 327
            D Q+L ++G+     ++  ++   +  P    V +  DG +KGNPG A  G + R S G 
Sbjct: 856  DRQLLVSLGISPNSCKAPSIVPVXWHPPLFSWVKVNTDGLAKGNPGPAACGGVFRDSAGY 915

Query: 326  F 324
            F
Sbjct: 916  F 916


>ref|XP_008383873.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 389

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
 Frame = -3

Query: 283 FFAEVMAVLCAGEWVVFR--------SDSSSVLKAFVTGKV--PWFAVTRWNMICNNLTH 134
           F+AE+ AV+ A E    R        SDSSSV+  F +G    PW   TRWN    +L +
Sbjct: 271 FYAELHAVILAIELAHARGWKNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLHLQN 330

Query: 133 MEF--VHSFREINFSAGKPVKRG 71
           M F   H FRE N  A K    G
Sbjct: 331 MVFRCSHIFREGNVVADKLANLG 353



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 506 DLQILKTVGMKSRCVQSLHVINCKFCLPRHPKVLMFCDGASKGNPGDAGYGFIARSSDGE 327
           D Q+L ++G+     ++  ++   +  P    V +  DG +KGNPG A  G + R S G 
Sbjct: 197 DRQLLVSLGISPNSCKAPSIVPVLWLPPPFSWVKVNTDGLAKGNPGPAACGGVFRDSTGY 256

Query: 326 F 324
           F
Sbjct: 257 F 257


>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 591

 Score = 41.2 bits (95), Expect(2) = 9e-06
 Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
 Frame = -3

Query: 283 FFAEVMAVLCAGEWVVFR--------SDSSSVLKAFVTGKV--PWFAVTRWNMICNNLTH 134
           F+AE+ AV+ A E    R        SDSSSV+  F +G    PW   TRWN    +L +
Sbjct: 473 FYAELHAVILAVELAHARGWXNLWLESDSSSVISCFASGSFSPPWSLQTRWNNCTLHLQN 532

Query: 133 MEF--VHSFREINFSAGKPVKRG 71
           M F   H FR  N  A K    G
Sbjct: 533 MVFRCSHIFRXGNXXADKLANLG 555



 Score = 35.0 bits (79), Expect(2) = 9e-06
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 506 DLQILKTVGMKSRCVQSLHVINCKFCLPRHPKVLMFCDGASKGNPGDAGYGFIARSSDGE 327
           D Q+L ++G+     ++  ++   +  P    V +  DG +KGNPG A  G + R S G 
Sbjct: 399 DRQLLVSLGISPNSCKAPSIVPVLWLPPXFSWVKVNTDGLAKGNPGPAACGGVFRDSAGY 458

Query: 326 F 324
           F
Sbjct: 459 F 459


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