BLASTX nr result
ID: Papaver30_contig00058648
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00058648
(580 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN07520.1| Ribulose bisphosphate carboxylase small chain 4, ... 66 2e-15
gb|KRH01757.1| hypothetical protein GLYMA_18G296900 [Glycine max] 53 1e-13
ref|NP_001066605.1| Os12g0291200 [Oryza sativa Japonica Group] g... 56 6e-13
gb|ABR17099.1| unknown [Picea sitchensis] 55 1e-11
gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox... 75 2e-11
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 75 2e-11
ref|XP_010693059.1| PREDICTED: ribulose bisphosphate carboxylase... 74 7e-11
gb|KHN17314.1| Ribulose bisphosphate carboxylase small chain, ch... 57 9e-11
ref|XP_010263805.1| PREDICTED: ribulose bisphosphate carboxylase... 73 9e-11
sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carbo... 73 1e-10
ref|XP_010693073.1| PREDICTED: ribulose bisphosphate carboxylase... 72 2e-10
ref|XP_008446602.1| PREDICTED: ribulose bisphosphate carboxylase... 72 2e-10
ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chai... 72 2e-10
ref|XP_010265138.1| PREDICTED: ribulose bisphosphate carboxylase... 72 3e-10
ref|XP_010265136.1| PREDICTED: ribulose bisphosphate carboxylase... 72 3e-10
gb|AIR75144.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 72 3e-10
gb|AIR75141.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 72 3e-10
gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryan... 72 3e-10
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun... 72 3e-10
ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase... 71 3e-10
>gb|KHN07520.1| Ribulose bisphosphate carboxylase small chain 4, chloroplastic
[Glycine soja]
Length = 120
Score = 66.2 bits (160), Expect(2) = 2e-15
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1
Query: 358 KIVIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
K V+KE++EAKT YP+SFIRII FD+ RQVQCISFIAYKP +
Sbjct: 78 KEVLKELQEAKTTYPNSFIRIIGFDNIRQVQCISFIAYKPPDF 120
Score = 42.7 bits (99), Expect(2) = 2e-15
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRV 388
+NRV S V+PF+GL+S A P + N++ITS+ +NGGRV
Sbjct: 14 INRVG---VSMVAPFTGLKSMAGIPTRKTNSDITSIATNGGRV 53
>gb|KRH01757.1| hypothetical protein GLYMA_18G296900 [Glycine max]
Length = 150
Score = 52.8 bits (125), Expect(2) = 1e-13
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYK 242
V+K V+EA AYP +F+RII FD+ RQVQC+ FIAYK
Sbjct: 91 VLKGVDEAVKAYPTAFVRIIGFDNVRQVQCVIFIAYK 127
Score = 50.4 bits (119), Expect(2) = 1e-13
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2
Query: 489 SSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQ 376
S V+PF+GL+S A FPVT+ N +I S+ SN RVQCMQ
Sbjct: 18 SMVAPFTGLKSMAGFPVTKTNYDINSIASNSERVQCMQ 55
>ref|NP_001066605.1| Os12g0291200 [Oryza sativa Japonica Group]
gi|113649112|dbj|BAF29624.1| Os12g0291200 [Oryza sativa
Japonica Group] gi|125579067|gb|EAZ20213.1| hypothetical
protein OsJ_35812 [Oryza sativa Japonica Group]
Length = 123
Score = 55.8 bits (133), Expect(2) = 6e-13
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIA 248
VIKE+EEAK AYPD+FI I+ FD+ R VQCISFIA
Sbjct: 89 VIKELEEAKKAYPDAFIHIVGFDNVRHVQCISFIA 123
Score = 45.1 bits (105), Expect(2) = 6e-13
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = -2
Query: 489 SSVSPFSGLRSTAAFPVTRKNNNI-TSLPSNGGRVQCMQV*P 367
+SV+PF GL+STA PV+R++ N +NGGR++CMQV P
Sbjct: 11 TSVAPFQGLKSTAGLPVSRRSTNSGFGDITNGGRIKCMQVWP 52
>gb|ABR17099.1| unknown [Picea sitchensis]
Length = 143
Score = 55.1 bits (131), Expect(2) = 1e-11
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -1
Query: 361 IKIVIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKP 239
+K V+ EV E AYP +FIR+I FD+ RQVQCISFI +KP
Sbjct: 100 LKEVLNEVNECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 140
Score = 41.6 bits (96), Expect(2) = 1e-11
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Frame = -2
Query: 483 VSPFSGLRSTAAFPVTRKNNNI-----TSLPSNGGRVQCMQV*P 367
VS F+GL+STA FP + K +N SNGGRV+CMQV P
Sbjct: 35 VSAFTGLKSTAQFPSSMKISNAGAEWERKTTSNGGRVRCMQVWP 78
>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Aralia elata]
Length = 183
Score = 75.5 bits (184), Expect = 2e-11
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R AQ S V+PF+GL+STAAFPVTRK N+ITSLPSNGGRVQCM+V P
Sbjct: 14 VSRAAPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWP 63
Score = 58.9 bits (141), Expect = 2e-06
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKP 239
V+ EVEE K YP++FIRII FD+ RQVQCISFIA+KP
Sbjct: 141 VLNEVEECKKEYPNAFIRIIGFDNVRQVQCISFIAFKP 178
>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Panax ginseng]
Length = 183
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R AQ S V+PF+GL+STAAFPVTRK N+ITSLPSNGGRVQCM+V P
Sbjct: 14 VSRAVPAQASMVAPFTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWP 63
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKP 239
V+KEVEE K YP+++IRII FD+ RQVQCISFIA+KP
Sbjct: 141 VLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178
>ref|XP_010693059.1| PREDICTED: ribulose bisphosphate carboxylase small chain [Beta
vulgaris subsp. vulgaris] gi|870867682|gb|KMT18551.1|
hypothetical protein BVRB_2g026850 [Beta vulgaris subsp.
vulgaris]
Length = 180
Score = 73.6 bits (179), Expect = 7e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ EVEE K AYPD+F+RII FD+KRQVQCISFIAYKPAGY
Sbjct: 140 VVNEVEEVKKAYPDAFVRIIGFDNKRQVQCISFIAYKPAGY 180
Score = 71.6 bits (174), Expect = 3e-10
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R P AQ S V+PF+GL+ST AFPVT+KN++ITSL SNGGRVQCMQV P
Sbjct: 14 VSRTP-AQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWP 62
>gb|KHN17314.1| Ribulose bisphosphate carboxylase small chain, chloroplastic
[Glycine soja]
Length = 103
Score = 57.4 bits (137), Expect(2) = 9e-11
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+K V+EA AYP +F+RII FD+ RQVQCI FIAYK GY
Sbjct: 63 VLKGVDEAVKAYPTAFVRIIGFDNVRQVQCIIFIAYKSPGY 103
Score = 36.2 bits (82), Expect(2) = 9e-11
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 453 AAFPVTRKNNNITSLPSNGGRVQCMQ 376
A FPVT+ N +I S+ SN RVQCMQ
Sbjct: 2 AGFPVTKTNYDINSIASNSERVQCMQ 27
>ref|XP_010263805.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 182
Score = 73.2 bits (178), Expect = 9e-11
Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRK-NNNITSLPSNGGRVQCMQV*P 367
VNRV AQ S V+PF+GL+S +AFPVTRK NN+ITSL SNGGRVQCMQV P
Sbjct: 14 VNRVSPAQASMVAPFTGLKSVSAFPVTRKTNNDITSLSSNGGRVQCMQVWP 64
Score = 68.2 bits (165), Expect = 3e-09
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ E+EEAK AYP++FIRII FD+KRQVQCISFIAYKP G+
Sbjct: 142 VLAELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAYKPPGF 182
>sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|304442|gb|AAA03693.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
gi|228311|prf||1802403A RuBisCO:SUBUNIT=small
Length = 182
Score = 72.8 bits (177), Expect = 1e-10
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
VNR P AQ S V+PF+GL+S AAFPVT+KNN+ITS+ +NGGRVQCMQV P
Sbjct: 14 VNRTP-AQASMVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWP 62
Score = 67.4 bits (163), Expect = 5e-09
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ E+EEAK AYP++FIRII FD+ RQVQCISFIAYKPA Y
Sbjct: 140 VVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKPASY 180
>ref|XP_010693073.1| PREDICTED: ribulose bisphosphate carboxylase small chain-like [Beta
vulgaris subsp. vulgaris] gi|870867681|gb|KMT18550.1|
hypothetical protein BVRB_2g026840 [Beta vulgaris subsp.
vulgaris]
Length = 180
Score = 72.4 bits (176), Expect = 2e-10
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ EVEE K AYPD+F+RII FD+KRQVQCISFIAYKP+GY
Sbjct: 140 VVNEVEEVKKAYPDAFVRIIGFDNKRQVQCISFIAYKPSGY 180
Score = 71.6 bits (174), Expect = 3e-10
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R P AQ S V+PF+GL+ST AFPVT+KN++ITSL SNGGRVQCMQV P
Sbjct: 14 VSRTP-AQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWP 62
>ref|XP_008446602.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Cucumis melo]
Length = 185
Score = 72.4 bits (176), Expect = 2e-10
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
VN AQ S V+PF+GL+S AAFPVTRKNN+IT+L SNGGRVQCM+V P
Sbjct: 14 VNSASPAQASMVAPFTGLKSAAAFPVTRKNNDITTLASNGGRVQCMKVWP 63
Score = 62.4 bits (150), Expect = 2e-07
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKP 239
V+ E+EEAK YPD++IR+I FD+ RQVQCISFIAYKP
Sbjct: 141 VVNEIEEAKKEYPDAYIRVIGFDNVRQVQCISFIAYKP 178
>ref|XP_002531624.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528742|gb|EEF30752.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 180
Score = 72.4 bits (176), Expect = 2e-10
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+KE+EEAK AYP+SFIRII FD+KRQVQCISFIAYKP+G+
Sbjct: 140 VLKELEEAKKAYPNSFIRIIGFDNKRQVQCISFIAYKPSGF 180
Score = 59.7 bits (143), Expect = 1e-06
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = -2
Query: 495 QYSSVSPFSGLRSTAAFPVTRK-NNNITSLPSNGGRVQCMQV*P 367
Q S V+PF+GL+S++ FPVTRK NN+IT+L SNGG+V CMQV P
Sbjct: 19 QASMVAPFTGLKSSSVFPVTRKQNNDITTLASNGGKVHCMQVWP 62
>ref|XP_010265138.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 182
Score = 71.6 bits (174), Expect = 3e-10
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRK-NNNITSLPSNGGRVQCMQV*P 367
V+R AQ S V+PFSGL+S AFPVTRK NN+I+SLPSNGGRVQCMQV P
Sbjct: 14 VSRATPAQASMVAPFSGLKSAXAFPVTRKANNDISSLPSNGGRVQCMQVWP 64
Score = 65.9 bits (159), Expect = 1e-08
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ E+EEAK AYP++FIRII FD+KRQVQCISFIAYKP +
Sbjct: 142 VLAELEEAKKAYPNAFIRIIGFDNKRQVQCISFIAYKPPSF 182
>ref|XP_010265136.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Nelumbo nucifera]
Length = 113
Score = 71.6 bits (174), Expect = 3e-10
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRK-NNNITSLPSNGGRVQCMQV*P 367
V+R AQ S V+PFSGL+S AFPVTRK NN+I+SLPSNGGRVQCMQV P
Sbjct: 14 VSRATPAQASMVAPFSGLKSAXAFPVTRKANNDISSLPSNGGRVQCMQVWP 64
>gb|AIR75144.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Blitum bonus-henricus]
Length = 150
Score = 71.6 bits (174), Expect = 3e-10
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R P AQ S V+PF+GL+ST AFPVT+KN++ITSL SNGGRVQCMQV P
Sbjct: 6 VSRTP-AQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWP 54
>gb|AIR75141.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial [Blitum nuttallianum]
Length = 165
Score = 71.6 bits (174), Expect = 3e-10
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
V+R P AQ S V+PF+GL+ST AFPVT+KN++ITSL SNGGRVQCMQV P
Sbjct: 6 VSRTP-AQASMVAPFNGLKSTVAFPVTKKNDDITSLASNGGRVQCMQVWP 54
>gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryanthemum
crystallinum]
Length = 182
Score = 71.6 bits (174), Expect = 3e-10
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
VNR P AQ S V PF+GL+S AAFPVT+KNN+ITS+ +NGGRVQCMQV P
Sbjct: 14 VNRTP-AQASMVVPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWP 62
Score = 65.5 bits (158), Expect = 2e-08
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+ E+ EAK AYP++FIRII FD+ RQVQCISFIAYKPA Y
Sbjct: 140 VVAELREAKKAYPEAFIRIIGFDNVRQVQCISFIAYKPASY 180
>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
x morifolium]
Length = 179
Score = 71.6 bits (174), Expect = 3e-10
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -2
Query: 516 VNRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
VNR AQ S V+PF+GL+S AFPVT+K+N+ +SLPSNGGRVQCM+V P
Sbjct: 12 VNRTTSAQASMVAPFTGLKSNVAFPVTKKSNDFSSLPSNGGRVQCMKVWP 61
Score = 60.1 bits (144), Expect = 8e-07
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+KE+ E K YP S++RII FD+ RQVQCISFIA+KP GY
Sbjct: 139 VLKELNECKKEYPQSWVRIIGFDNVRQVQCISFIAHKPDGY 179
>ref|XP_009357812.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like isoform X1 [Pyrus x bretschneideri]
Length = 183
Score = 71.2 bits (173), Expect = 3e-10
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -1
Query: 352 VIKEVEEAKTAYPDSFIRIIRFDSKRQVQCISFIAYKPAGY 230
V+KE+EEAK AYP++FIRII FD+ RQVQCISFIAYKPAGY
Sbjct: 143 VLKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYKPAGY 183
Score = 70.5 bits (171), Expect = 6e-10
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = -2
Query: 513 NRVPQAQYSSVSPFSGLRSTAAFPVTRKNNNITSLPSNGGRVQCMQV*P 367
+R AQ S V+PF+GL+S++AFPVTRK+N+ITS+ SNGGRVQCMQV P
Sbjct: 17 DRAAPAQASMVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWP 65