BLASTX nr result

ID: Papaver30_contig00058409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00058409
         (763 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307262.2| hypothetical protein POPTR_0005s18110g [Popu...    58   2e-08
ref|XP_011005871.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-07

>ref|XP_002307262.2| hypothetical protein POPTR_0005s18110g [Populus trichocarpa]
           gi|550339216|gb|EEE94258.2| hypothetical protein
           POPTR_0005s18110g [Populus trichocarpa]
          Length = 928

 Score = 58.2 bits (139), Expect(2) = 2e-08
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 29/130 (22%)
 Frame = -2

Query: 711 F*IMQLRYVVSWNALLTGYHYSNLQREAMILFHHMKLEYQ--------SVL*LC*LYDPR 556
           F +M  R VVSWNAL+TG  + NLQ EA++LF  M  EYQ        +VL LC  Y   
Sbjct: 580 FEVMSERCVVSWNALITGLRHLNLQNEALVLFSQM-TEYQRPNSVTLLNVLPLC--YSHL 636

Query: 555 GRTNRNLP--------------------HFPEMLRVGMQPAHVTV-KLFSAYAQLKSMEL 439
             T +++P                     F ++LR+G+QP ++TV  L SA AQL  + L
Sbjct: 637 QGT-KDIPVWNAIISVHIQTKYPEKAVCFFYDLLRMGLQPDNITVLSLVSACAQLNFLSL 695

Query: 438 SDARILRVIC 409
           + + +  VIC
Sbjct: 696 AHSVMAYVIC 705



 Score = 28.5 bits (62), Expect(2) = 2e-08
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 433 CKDFESDLLVNYTLIDLYAR 374
           CK FE D  V+  LID+YAR
Sbjct: 705 CKGFEKDSAVSNALIDMYAR 724


>ref|XP_011005871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like isoform X2 [Populus euphratica]
          Length = 927

 Score = 55.1 bits (131), Expect(2) = 1e-07
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 29/130 (22%)
 Frame = -2

Query: 711 F*IMQLRYVVSWNALLTGYHYSNLQREAMILFHHMKLEYQ--------SVL*LC*LYDPR 556
           F +M  R VVSWNA +TG  + NLQ EA++LF  M  +YQ        +VL LC  Y   
Sbjct: 580 FEVMSERCVVSWNAFITGLRHLNLQNEALVLFSQM-TKYQRPNSVTLLNVLPLC--YSHL 636

Query: 555 GRTNRNLP--------------------HFPEMLRVGMQPAHVTV-KLFSAYAQLKSMEL 439
             T +++P                     F ++LR+G+QP ++TV  L SA AQL  + L
Sbjct: 637 QGT-KDIPVWNAIISVHIQTKYPEKAVCFFYDLLRMGLQPDNITVLSLVSACAQLNFLSL 695

Query: 438 SDARILRVIC 409
           + + +  VIC
Sbjct: 696 AHSVMAYVIC 705



 Score = 28.5 bits (62), Expect(2) = 1e-07
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 433 CKDFESDLLVNYTLIDLYAR 374
           CK FE D  V+  LID+YAR
Sbjct: 705 CKGFEEDSAVSNALIDMYAR 724


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