BLASTX nr result

ID: Papaver30_contig00057959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00057959
         (1207 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004294159.1| PREDICTED: LOB domain-containing protein 4 [...    52   3e-07

>ref|XP_004294159.1| PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp.
           vesca]
          Length = 177

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 31/98 (31%), Positives = 49/98 (50%)
 Frame = -3

Query: 968 VETIIMEAGARMSDPVHGLAGIAETNSQKLDNLSSQLAFANQQNQFHHRHSGAMQQDPQQ 789
           V +++ EA AR+ DPV+G  G   +  Q++D L +QLA A Q    H +    M Q P  
Sbjct: 71  VSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIA-QAEVVHMK----MNQFPSA 125

Query: 788 FQPNGAKGASSSPLGAVPSPSQNQI*IHPLQQQSPLFS 675
             P      ++SP+  +P+ + +Q   HP Q     F+
Sbjct: 126 SSPAATTSENTSPVSVMPNNNNSQHHYHPHQSTKSFFT 163



 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -1

Query: 1087 FVPFSPSDEGGEDFQYVVKAFGASNLRKLIQSAYTEQ 977
            F P+ P+DE  + F  V K FGASN+ K++Q    +Q
Sbjct: 31   FAPYFPADEPHK-FASVHKVFGASNVNKMLQELPEQQ 66


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