BLASTX nr result

ID: Papaver30_contig00057838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00057838
         (844 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008349094.1| PREDICTED: putative ribonuclease H protein A...    60   3e-06
emb|CAN80153.1| hypothetical protein VITISV_037499 [Vitis vinifera]    60   3e-06
emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera]    54   3e-06
emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]    54   5e-06
emb|CAN80166.1| hypothetical protein VITISV_033619 [Vitis vinifera]    47   8e-06

>ref|XP_008349094.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 494

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = -2

Query: 714 LMLIKCVIESLPVYFFLFQDACIYCSVS*ETYAYFLGDDDKRVGRKFHLVKWELVCPKKK 535
           L LI+ V+ SLP+Y  LF+          +    FL +  +  G+KFHLVKWE VC  K+
Sbjct: 68  LTLIQAVLGSLPIYMSLFKAPRGVIGRLEKLMKGFLREGVEE-GKKFHLVKWEKVCKSKE 126

Query: 534 VGGLGLHRIKSMNDSFLSKW 475
            GGLGL  +++ N + L+KW
Sbjct: 127 EGGLGLGNLRNRNAALLAKW 146


>emb|CAN80153.1| hypothetical protein VITISV_037499 [Vitis vinifera]
          Length = 384

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = -2

Query: 714 LMLIKCVIESLPVYFFLFQDACIYCSVS*ETYAYFLGDDDKRVGRKFHLVKWELVCPKKK 535
           L+LIK  + SLP+YF  F       +   E     L  D +   RKFHLV W  VC  KK
Sbjct: 211 LVLIKSTLSSLPIYFMPFFVIPKKVNQVRENSKELLWRDTEE-RRKFHLVNWVEVCKNKK 269

Query: 534 VGGLGLHRIKSMNDSFLSKW 475
            GGLGL  ++ +N +FL KW
Sbjct: 270 HGGLGLRHLEGLNQAFLGKW 289


>emb|CAN77480.1| hypothetical protein VITISV_021632 [Vitis vinifera]
          Length = 2706

 Score = 54.3 bits (129), Expect(2) = 3e-06
 Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -2

Query: 585  GRKFHLVKWELVCPKKKVGGLGLHRIKSMNDSFLSKW---FGCCK 460
            G K HLVKWE VC +K+ GGLGL +I  +N +FL KW   F C K
Sbjct: 1938 GTKSHLVKWEAVCVEKEKGGLGLRKITILNKAFLGKWIWRFACAK 1982



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 668  SFFKMPASTVQ*VEKLMRIF-WG 603
            S F+MP S  + +EKL R F WG
Sbjct: 1911 SVFRMPKSVARRIEKLQRDFLWG 1933


>emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]
          Length = 1168

 Score = 53.5 bits (127), Expect(2) = 5e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -2

Query: 588 VGRKFHLVKWELVCPKKKVGGLGLHRIKSMNDSFLSKWFGCCKSLEDFLLLQEISS 421
           +G K HLVKW++VC +K+ GGLGL RI ++N + L KW        D L  Q IS+
Sbjct: 793 LGGKIHLVKWDVVCTEKRNGGLGLRRIATLNRALLGKWIWRFACERDNLWKQVIST 848



 Score = 25.0 bits (53), Expect(2) = 5e-06
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 668 SFFKMPASTVQ*VEKLMRIF-WG 603
           S F+MP S  + VEK+ R F WG
Sbjct: 767 SIFRMPKSVARRVEKIQRDFLWG 789


>emb|CAN80166.1| hypothetical protein VITISV_033619 [Vitis vinifera]
          Length = 1306

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = -2

Query: 585  GRKFHLVKWELVCPKKKVGGLGLHRIKSMNDSFLSKW 475
            G+K HLVKW++VC  K +GGLGL  I   N + L KW
Sbjct: 923  GKKDHLVKWDIVCKPKTIGGLGLGNISWRNLALLGKW 959



 Score = 30.4 bits (67), Expect(2) = 8e-06
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = -3

Query: 752  NSCFTGWYKAYLFSC*SNA*LRVCLC-----IFSFFKMPASTVQ*VEKLMRIF 609
            +S   GW KAYL        ++ CL        S FKMPAS    + +L R+F
Sbjct: 863  SSRLDGWQKAYLSFGGRITLIQSCLSHLXSYFLSLFKMPASVAAKIXRLQRVF 915


Top